Multiple sequence alignment - TraesCS7A01G564100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G564100 chr7A 100.000 3224 0 0 1 3224 733780023 733783246 0.000000e+00 5954.0
1 TraesCS7A01G564100 chr7A 79.790 1331 214 30 1008 2314 733665161 733666460 0.000000e+00 917.0
2 TraesCS7A01G564100 chr7A 85.698 888 52 31 1034 1896 733669011 733669848 0.000000e+00 867.0
3 TraesCS7A01G564100 chr7A 78.009 1396 179 60 1011 2357 733690915 733692231 0.000000e+00 760.0
4 TraesCS7A01G564100 chr7A 84.292 643 79 13 1047 1675 27224278 27224912 2.750000e-170 608.0
5 TraesCS7A01G564100 chr7A 84.891 503 52 16 1951 2439 733669860 733670352 1.340000e-133 486.0
6 TraesCS7A01G564100 chr7A 85.614 285 24 8 2695 2964 733695359 733695641 1.890000e-72 283.0
7 TraesCS7A01G564100 chr7A 83.729 295 18 18 2799 3087 733670487 733670757 5.340000e-63 252.0
8 TraesCS7A01G564100 chr7A 91.176 170 9 3 2799 2964 733734877 733735044 3.240000e-55 226.0
9 TraesCS7A01G564100 chr7A 80.287 279 30 13 2706 2963 733821331 733821057 1.530000e-43 187.0
10 TraesCS7A01G564100 chr7A 76.494 251 40 13 2002 2248 733611265 733611500 5.650000e-23 119.0
11 TraesCS7A01G564100 chr7A 88.421 95 10 1 120 214 733688626 733688719 2.630000e-21 113.0
12 TraesCS7A01G564100 chr7D 89.118 2178 172 22 1011 3151 633394569 633392420 0.000000e+00 2649.0
13 TraesCS7A01G564100 chr7D 81.179 1493 177 49 990 2444 633408700 633407274 0.000000e+00 1105.0
14 TraesCS7A01G564100 chr7D 80.854 1358 201 31 984 2314 633399919 633398594 0.000000e+00 1013.0
15 TraesCS7A01G564100 chr7D 70.962 1071 210 62 1223 2248 633510386 633509372 9.260000e-36 161.0
16 TraesCS7A01G564100 chr7D 92.857 98 6 1 501 597 343751928 343752025 1.210000e-29 141.0
17 TraesCS7A01G564100 chr7D 87.755 98 11 1 120 217 633405023 633404927 2.630000e-21 113.0
18 TraesCS7A01G564100 chr7B 84.097 1572 185 28 993 2544 714468119 714466593 0.000000e+00 1458.0
19 TraesCS7A01G564100 chr7B 83.911 1299 163 21 1011 2291 714317380 714316110 0.000000e+00 1199.0
20 TraesCS7A01G564100 chr7B 80.314 1529 218 44 835 2318 749460251 749458761 0.000000e+00 1079.0
21 TraesCS7A01G564100 chr7B 84.783 460 58 7 990 1449 749464379 749463932 4.900000e-123 451.0
22 TraesCS7A01G564100 chr7B 87.871 371 45 0 1008 1378 749428023 749427653 1.370000e-118 436.0
23 TraesCS7A01G564100 chr7B 82.328 464 42 24 2685 3136 714315687 714315252 1.830000e-97 366.0
24 TraesCS7A01G564100 chr7B 95.092 163 8 0 1772 1934 749424874 749424712 1.150000e-64 257.0
25 TraesCS7A01G564100 chr7B 83.784 296 21 14 2685 2968 714466575 714466295 4.130000e-64 255.0
26 TraesCS7A01G564100 chr7B 76.176 319 48 19 2002 2312 749535132 749534834 3.350000e-30 143.0
27 TraesCS7A01G564100 chr4A 83.487 866 113 19 1049 1901 704500569 704501417 0.000000e+00 780.0
28 TraesCS7A01G564100 chr6B 88.285 239 16 7 2898 3136 669954208 669954434 3.170000e-70 276.0
29 TraesCS7A01G564100 chr3B 72.595 894 149 61 1061 1894 77427833 77426976 4.220000e-49 206.0
30 TraesCS7A01G564100 chr3B 92.079 101 8 0 500 600 728615952 728615852 3.350000e-30 143.0
31 TraesCS7A01G564100 chr3B 95.455 88 4 0 498 585 20744666 20744579 1.210000e-29 141.0
32 TraesCS7A01G564100 chr1B 92.157 102 6 1 491 592 453132591 453132492 3.350000e-30 143.0
33 TraesCS7A01G564100 chr3A 94.505 91 5 0 495 585 726304015 726303925 1.210000e-29 141.0
34 TraesCS7A01G564100 chr3A 95.402 87 4 0 500 586 199136745 199136831 4.340000e-29 139.0
35 TraesCS7A01G564100 chr5D 94.444 90 5 0 499 588 293405764 293405675 4.340000e-29 139.0
36 TraesCS7A01G564100 chr5D 94.318 88 5 0 499 586 384795398 384795485 5.610000e-28 135.0
37 TraesCS7A01G564100 chr2A 92.784 97 6 1 496 591 133985105 133985009 4.340000e-29 139.0
38 TraesCS7A01G564100 chr3D 81.143 175 22 10 2101 2268 48697817 48697987 2.610000e-26 130.0
39 TraesCS7A01G564100 chr3D 95.238 42 2 0 1418 1459 48630368 48630409 2.080000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G564100 chr7A 733780023 733783246 3223 False 5954.000000 5954 100.000000 1 3224 1 chr7A.!!$F4 3223
1 TraesCS7A01G564100 chr7A 733665161 733670757 5596 False 630.500000 917 83.527000 1008 3087 4 chr7A.!!$F5 2079
2 TraesCS7A01G564100 chr7A 27224278 27224912 634 False 608.000000 608 84.292000 1047 1675 1 chr7A.!!$F1 628
3 TraesCS7A01G564100 chr7A 733688626 733695641 7015 False 385.333333 760 84.014667 120 2964 3 chr7A.!!$F6 2844
4 TraesCS7A01G564100 chr7D 633392420 633394569 2149 True 2649.000000 2649 89.118000 1011 3151 1 chr7D.!!$R1 2140
5 TraesCS7A01G564100 chr7D 633398594 633399919 1325 True 1013.000000 1013 80.854000 984 2314 1 chr7D.!!$R2 1330
6 TraesCS7A01G564100 chr7D 633404927 633408700 3773 True 609.000000 1105 84.467000 120 2444 2 chr7D.!!$R4 2324
7 TraesCS7A01G564100 chr7B 714466295 714468119 1824 True 856.500000 1458 83.940500 993 2968 2 chr7B.!!$R3 1975
8 TraesCS7A01G564100 chr7B 714315252 714317380 2128 True 782.500000 1199 83.119500 1011 3136 2 chr7B.!!$R2 2125
9 TraesCS7A01G564100 chr7B 749458761 749464379 5618 True 765.000000 1079 82.548500 835 2318 2 chr7B.!!$R5 1483
10 TraesCS7A01G564100 chr7B 749424712 749428023 3311 True 346.500000 436 91.481500 1008 1934 2 chr7B.!!$R4 926
11 TraesCS7A01G564100 chr4A 704500569 704501417 848 False 780.000000 780 83.487000 1049 1901 1 chr4A.!!$F1 852
12 TraesCS7A01G564100 chr3B 77426976 77427833 857 True 206.000000 206 72.595000 1061 1894 1 chr3B.!!$R2 833

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 1057 0.104855 TGATGGTGGCTCTCGTATGC 59.895 55.0 0.00 0.0 0.0 3.14 F
829 1434 0.178970 TCAGGGCCGGGAGAGTATAC 60.179 60.0 2.18 0.0 0.0 1.47 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1950 12026 1.097547 CCATTAGCGACAGCCTTGGG 61.098 60.0 0.0 0.00 46.67 4.12 R
2504 15564 0.179059 TGGCCCACATACACGCTATG 60.179 55.0 0.0 0.23 0.00 2.23 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.878429 CGCGGCGCTCCTAGATAT 59.122 61.111 30.54 0.00 0.00 1.63
34 35 1.515088 CGCGGCGCTCCTAGATATG 60.515 63.158 30.54 5.96 0.00 1.78
35 36 1.587054 GCGGCGCTCCTAGATATGT 59.413 57.895 26.86 0.00 0.00 2.29
36 37 0.456995 GCGGCGCTCCTAGATATGTC 60.457 60.000 26.86 0.00 0.00 3.06
37 38 1.169577 CGGCGCTCCTAGATATGTCT 58.830 55.000 7.64 0.00 38.52 3.41
38 39 1.135546 CGGCGCTCCTAGATATGTCTG 60.136 57.143 7.64 0.00 35.87 3.51
39 40 2.163509 GGCGCTCCTAGATATGTCTGA 58.836 52.381 7.64 0.00 35.87 3.27
40 41 2.163412 GGCGCTCCTAGATATGTCTGAG 59.837 54.545 7.64 2.61 35.87 3.35
42 43 2.163412 CGCTCCTAGATATGTCTGAGGC 59.837 54.545 1.62 1.19 35.87 4.70
43 44 2.163412 GCTCCTAGATATGTCTGAGGCG 59.837 54.545 1.62 2.27 35.87 5.52
47 48 0.470833 AGATATGTCTGAGGCGGCCT 60.471 55.000 24.13 24.13 36.03 5.19
48 49 0.320247 GATATGTCTGAGGCGGCCTG 60.320 60.000 29.31 13.62 31.76 4.85
143 144 3.450457 TGAAATGGTTGCCAACACTTCTT 59.550 39.130 10.18 0.00 36.95 2.52
144 145 4.081198 TGAAATGGTTGCCAACACTTCTTT 60.081 37.500 10.18 1.48 36.95 2.52
145 146 4.486125 AATGGTTGCCAACACTTCTTTT 57.514 36.364 10.18 0.00 36.95 2.27
198 199 4.828409 CACAGTTGGATGTGCCCT 57.172 55.556 0.00 0.00 43.69 5.19
207 208 1.852309 TGGATGTGCCCTCCATGTATT 59.148 47.619 0.00 0.00 37.87 1.89
229 230 4.387598 TGGATTTGAAAATGCAAACCCAG 58.612 39.130 7.42 0.00 44.55 4.45
231 232 5.280940 GGATTTGAAAATGCAAACCCAGCA 61.281 41.667 0.00 0.00 40.52 4.41
234 235 0.760572 AAAATGCAAACCCAGCAGCT 59.239 45.000 0.00 0.00 46.36 4.24
235 236 0.760572 AAATGCAAACCCAGCAGCTT 59.239 45.000 0.00 0.00 46.36 3.74
236 237 0.319405 AATGCAAACCCAGCAGCTTC 59.681 50.000 0.00 0.00 46.36 3.86
237 238 1.870055 ATGCAAACCCAGCAGCTTCG 61.870 55.000 0.00 0.00 46.36 3.79
248 853 0.239347 GCAGCTTCGTGAATGCTTGT 59.761 50.000 1.87 0.00 35.78 3.16
252 857 1.335324 GCTTCGTGAATGCTTGTTGCT 60.335 47.619 0.00 0.00 43.37 3.91
254 859 1.592064 TCGTGAATGCTTGTTGCTGA 58.408 45.000 0.00 0.00 43.37 4.26
255 860 1.946081 TCGTGAATGCTTGTTGCTGAA 59.054 42.857 0.00 0.00 43.37 3.02
256 861 2.553602 TCGTGAATGCTTGTTGCTGAAT 59.446 40.909 0.00 0.00 43.37 2.57
258 863 3.120616 CGTGAATGCTTGTTGCTGAATTG 59.879 43.478 0.00 0.00 43.37 2.32
260 865 2.088950 ATGCTTGTTGCTGAATTGGC 57.911 45.000 0.00 0.00 43.37 4.52
262 867 0.318955 GCTTGTTGCTGAATTGGCGT 60.319 50.000 0.00 0.00 38.95 5.68
263 868 1.411394 CTTGTTGCTGAATTGGCGTG 58.589 50.000 0.00 0.00 0.00 5.34
264 869 0.743688 TTGTTGCTGAATTGGCGTGT 59.256 45.000 0.00 0.00 0.00 4.49
265 870 0.743688 TGTTGCTGAATTGGCGTGTT 59.256 45.000 0.00 0.00 0.00 3.32
266 871 1.130955 GTTGCTGAATTGGCGTGTTG 58.869 50.000 0.00 0.00 0.00 3.33
269 874 0.730494 GCTGAATTGGCGTGTTGAGC 60.730 55.000 0.00 0.00 0.00 4.26
279 884 0.594796 CGTGTTGAGCCTTTGTTGCC 60.595 55.000 0.00 0.00 0.00 4.52
281 886 1.134848 GTGTTGAGCCTTTGTTGCCAA 60.135 47.619 0.00 0.00 0.00 4.52
282 887 1.134848 TGTTGAGCCTTTGTTGCCAAC 60.135 47.619 0.00 0.00 38.86 3.77
283 888 1.134848 GTTGAGCCTTTGTTGCCAACA 60.135 47.619 6.08 6.08 38.56 3.33
284 889 0.459489 TGAGCCTTTGTTGCCAACAC 59.541 50.000 10.34 0.00 41.97 3.32
287 892 1.136891 AGCCTTTGTTGCCAACACTTC 59.863 47.619 10.34 0.26 41.97 3.01
288 893 1.136891 GCCTTTGTTGCCAACACTTCT 59.863 47.619 10.34 0.00 41.97 2.85
289 894 2.418609 GCCTTTGTTGCCAACACTTCTT 60.419 45.455 10.34 0.00 41.97 2.52
290 895 3.860641 CCTTTGTTGCCAACACTTCTTT 58.139 40.909 10.34 0.00 41.97 2.52
291 896 3.865164 CCTTTGTTGCCAACACTTCTTTC 59.135 43.478 10.34 0.00 41.97 2.62
293 898 5.163561 CCTTTGTTGCCAACACTTCTTTCTA 60.164 40.000 10.34 0.00 41.97 2.10
294 899 5.499139 TTGTTGCCAACACTTCTTTCTAG 57.501 39.130 10.34 0.00 41.97 2.43
295 900 4.523083 TGTTGCCAACACTTCTTTCTAGT 58.477 39.130 6.08 0.00 36.25 2.57
296 901 4.335315 TGTTGCCAACACTTCTTTCTAGTG 59.665 41.667 6.08 0.00 46.56 2.74
307 912 8.552469 CACTTCTTTCTAGTGTTGTTGAATTG 57.448 34.615 0.00 0.00 38.51 2.32
313 918 5.353111 TCTAGTGTTGTTGAATTGACGTGA 58.647 37.500 0.00 0.00 0.00 4.35
340 945 2.616458 GGGGAGGAATGCCACCACT 61.616 63.158 8.69 0.00 44.25 4.00
344 949 1.559682 GGAGGAATGCCACCACTTCTA 59.440 52.381 0.25 0.00 43.72 2.10
346 951 1.282157 AGGAATGCCACCACTTCTACC 59.718 52.381 0.00 0.00 36.29 3.18
349 954 1.198759 ATGCCACCACTTCTACCGGT 61.199 55.000 13.98 13.98 0.00 5.28
371 976 3.490759 CACCAGCATGACGACGGC 61.491 66.667 0.00 0.00 39.69 5.68
418 1023 1.135170 GGTGAGTAGGTTGCCGTAGAC 60.135 57.143 0.00 0.00 0.00 2.59
422 1027 1.480954 AGTAGGTTGCCGTAGACATGG 59.519 52.381 0.00 0.00 0.00 3.66
440 1045 2.794103 TGGATGTTCCTTGTGATGGTG 58.206 47.619 0.00 0.00 37.46 4.17
445 1050 1.067295 TTCCTTGTGATGGTGGCTCT 58.933 50.000 0.00 0.00 0.00 4.09
446 1051 0.615331 TCCTTGTGATGGTGGCTCTC 59.385 55.000 0.00 0.00 0.00 3.20
449 1054 1.204704 CTTGTGATGGTGGCTCTCGTA 59.795 52.381 0.00 0.00 0.00 3.43
450 1055 1.485124 TGTGATGGTGGCTCTCGTAT 58.515 50.000 0.00 0.00 0.00 3.06
451 1056 1.136891 TGTGATGGTGGCTCTCGTATG 59.863 52.381 0.00 0.00 0.00 2.39
452 1057 0.104855 TGATGGTGGCTCTCGTATGC 59.895 55.000 0.00 0.00 0.00 3.14
455 1060 1.153628 GGTGGCTCTCGTATGCGTT 60.154 57.895 2.37 0.00 39.49 4.84
457 1062 0.645868 GTGGCTCTCGTATGCGTTTC 59.354 55.000 2.37 0.00 39.49 2.78
459 1064 1.067142 TGGCTCTCGTATGCGTTTCTT 60.067 47.619 2.37 0.00 39.49 2.52
460 1065 1.588861 GGCTCTCGTATGCGTTTCTTC 59.411 52.381 2.37 0.00 39.49 2.87
463 1068 3.000575 GCTCTCGTATGCGTTTCTTCTTC 60.001 47.826 2.37 0.00 39.49 2.87
464 1069 4.416620 CTCTCGTATGCGTTTCTTCTTCT 58.583 43.478 2.37 0.00 39.49 2.85
465 1070 5.556355 TCTCGTATGCGTTTCTTCTTCTA 57.444 39.130 2.37 0.00 39.49 2.10
467 1072 5.971792 TCTCGTATGCGTTTCTTCTTCTATG 59.028 40.000 2.37 0.00 39.49 2.23
468 1073 5.886992 TCGTATGCGTTTCTTCTTCTATGA 58.113 37.500 2.37 0.00 39.49 2.15
469 1074 5.971792 TCGTATGCGTTTCTTCTTCTATGAG 59.028 40.000 2.37 0.00 39.49 2.90
470 1075 5.174035 CGTATGCGTTTCTTCTTCTATGAGG 59.826 44.000 0.00 0.00 0.00 3.86
471 1076 3.262420 TGCGTTTCTTCTTCTATGAGGC 58.738 45.455 0.00 0.00 0.00 4.70
472 1077 3.055819 TGCGTTTCTTCTTCTATGAGGCT 60.056 43.478 0.00 0.00 0.00 4.58
473 1078 3.935828 GCGTTTCTTCTTCTATGAGGCTT 59.064 43.478 0.00 0.00 0.00 4.35
474 1079 4.201763 GCGTTTCTTCTTCTATGAGGCTTG 60.202 45.833 0.00 0.00 0.00 4.01
475 1080 5.171476 CGTTTCTTCTTCTATGAGGCTTGA 58.829 41.667 0.00 0.00 0.00 3.02
476 1081 5.814705 CGTTTCTTCTTCTATGAGGCTTGAT 59.185 40.000 0.00 0.00 0.00 2.57
477 1082 6.019156 CGTTTCTTCTTCTATGAGGCTTGATC 60.019 42.308 0.00 0.00 0.00 2.92
478 1083 5.193663 TCTTCTTCTATGAGGCTTGATCG 57.806 43.478 0.00 0.00 0.00 3.69
482 1087 3.998099 TCTATGAGGCTTGATCGACAG 57.002 47.619 0.00 0.00 0.00 3.51
483 1088 3.291584 TCTATGAGGCTTGATCGACAGT 58.708 45.455 0.00 0.00 0.00 3.55
485 1090 2.084610 TGAGGCTTGATCGACAGTTG 57.915 50.000 0.00 0.00 0.00 3.16
487 1092 2.560981 TGAGGCTTGATCGACAGTTGTA 59.439 45.455 0.00 0.00 0.00 2.41
489 1094 3.525537 AGGCTTGATCGACAGTTGTATG 58.474 45.455 0.00 0.00 0.00 2.39
490 1095 2.030946 GGCTTGATCGACAGTTGTATGC 59.969 50.000 0.00 0.00 0.00 3.14
491 1096 2.932614 GCTTGATCGACAGTTGTATGCT 59.067 45.455 0.00 0.00 0.00 3.79
492 1097 3.000724 GCTTGATCGACAGTTGTATGCTC 59.999 47.826 0.00 0.00 0.00 4.26
494 1099 4.186856 TGATCGACAGTTGTATGCTCAA 57.813 40.909 0.00 0.00 0.00 3.02
496 1101 4.994217 TGATCGACAGTTGTATGCTCAAAA 59.006 37.500 0.00 0.00 0.00 2.44
498 1103 5.940192 TCGACAGTTGTATGCTCAAAATT 57.060 34.783 0.00 0.00 0.00 1.82
499 1104 5.688823 TCGACAGTTGTATGCTCAAAATTG 58.311 37.500 0.00 0.00 0.00 2.32
500 1105 5.238432 TCGACAGTTGTATGCTCAAAATTGT 59.762 36.000 0.00 0.00 0.00 2.71
501 1106 6.425417 TCGACAGTTGTATGCTCAAAATTGTA 59.575 34.615 0.00 0.00 0.00 2.41
502 1107 6.519761 CGACAGTTGTATGCTCAAAATTGTAC 59.480 38.462 0.00 0.00 0.00 2.90
503 1108 7.510549 ACAGTTGTATGCTCAAAATTGTACT 57.489 32.000 0.00 0.00 0.00 2.73
504 1109 7.584987 ACAGTTGTATGCTCAAAATTGTACTC 58.415 34.615 0.00 0.00 0.00 2.59
505 1110 7.023575 CAGTTGTATGCTCAAAATTGTACTCC 58.976 38.462 0.00 0.00 0.00 3.85
507 1112 5.815581 TGTATGCTCAAAATTGTACTCCCT 58.184 37.500 0.00 0.00 0.00 4.20
508 1113 5.880332 TGTATGCTCAAAATTGTACTCCCTC 59.120 40.000 0.00 0.00 0.00 4.30
511 1116 4.202461 TGCTCAAAATTGTACTCCCTCTGT 60.202 41.667 0.00 0.00 0.00 3.41
513 1118 5.938125 GCTCAAAATTGTACTCCCTCTGTAA 59.062 40.000 0.00 0.00 0.00 2.41
514 1119 6.430000 GCTCAAAATTGTACTCCCTCTGTAAA 59.570 38.462 0.00 0.00 0.00 2.01
515 1120 7.573283 GCTCAAAATTGTACTCCCTCTGTAAAC 60.573 40.741 0.00 0.00 0.00 2.01
517 1122 8.653191 TCAAAATTGTACTCCCTCTGTAAACTA 58.347 33.333 0.00 0.00 0.00 2.24
518 1123 9.280174 CAAAATTGTACTCCCTCTGTAAACTAA 57.720 33.333 0.00 0.00 0.00 2.24
527 1132 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
528 1133 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
529 1134 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
531 1136 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
551 1156 9.865321 AGCGTTTAGATAACTAAAATAGTGACA 57.135 29.630 6.76 0.00 45.97 3.58
580 1185 8.441312 TTGCTTTTATATTAGTTTACGGAGGG 57.559 34.615 0.00 0.00 0.00 4.30
581 1186 7.794041 TGCTTTTATATTAGTTTACGGAGGGA 58.206 34.615 0.00 0.00 0.00 4.20
582 1187 7.929785 TGCTTTTATATTAGTTTACGGAGGGAG 59.070 37.037 0.00 0.00 0.00 4.30
583 1188 7.930325 GCTTTTATATTAGTTTACGGAGGGAGT 59.070 37.037 0.00 0.00 0.00 3.85
589 1194 6.855763 TTAGTTTACGGAGGGAGTAATTCA 57.144 37.500 0.00 0.00 34.50 2.57
590 1195 5.952347 AGTTTACGGAGGGAGTAATTCAT 57.048 39.130 0.00 0.00 34.50 2.57
592 1197 7.613551 AGTTTACGGAGGGAGTAATTCATAT 57.386 36.000 0.00 0.00 34.50 1.78
593 1198 8.030913 AGTTTACGGAGGGAGTAATTCATATT 57.969 34.615 0.00 0.00 34.50 1.28
594 1199 8.491958 AGTTTACGGAGGGAGTAATTCATATTT 58.508 33.333 0.00 0.00 34.50 1.40
595 1200 9.117183 GTTTACGGAGGGAGTAATTCATATTTT 57.883 33.333 0.00 0.00 34.50 1.82
596 1201 8.671384 TTACGGAGGGAGTAATTCATATTTTG 57.329 34.615 0.00 0.00 0.00 2.44
597 1202 6.895782 ACGGAGGGAGTAATTCATATTTTGA 58.104 36.000 0.00 0.00 0.00 2.69
598 1203 7.518188 ACGGAGGGAGTAATTCATATTTTGAT 58.482 34.615 0.00 0.00 33.34 2.57
599 1204 8.656806 ACGGAGGGAGTAATTCATATTTTGATA 58.343 33.333 0.00 0.00 33.34 2.15
611 1216 7.700322 TCATATTTTGATAAGTCGAGACAGC 57.300 36.000 5.99 0.00 0.00 4.40
612 1217 6.701841 TCATATTTTGATAAGTCGAGACAGCC 59.298 38.462 5.99 0.00 0.00 4.85
613 1218 4.537135 TTTTGATAAGTCGAGACAGCCT 57.463 40.909 5.99 0.00 0.00 4.58
614 1219 4.537135 TTTGATAAGTCGAGACAGCCTT 57.463 40.909 5.99 0.00 0.00 4.35
616 1221 2.097629 TGATAAGTCGAGACAGCCTTCG 59.902 50.000 5.99 0.00 0.00 3.79
617 1222 1.817357 TAAGTCGAGACAGCCTTCGA 58.183 50.000 5.99 0.00 0.00 3.71
618 1223 1.178276 AAGTCGAGACAGCCTTCGAT 58.822 50.000 5.99 0.00 36.97 3.59
619 1224 2.039818 AGTCGAGACAGCCTTCGATA 57.960 50.000 5.99 0.00 36.97 2.92
620 1225 2.366533 AGTCGAGACAGCCTTCGATAA 58.633 47.619 5.99 0.00 36.97 1.75
621 1226 2.753452 AGTCGAGACAGCCTTCGATAAA 59.247 45.455 5.99 0.00 36.97 1.40
622 1227 3.381908 AGTCGAGACAGCCTTCGATAAAT 59.618 43.478 5.99 0.00 36.97 1.40
623 1228 3.487574 GTCGAGACAGCCTTCGATAAATG 59.512 47.826 0.00 0.00 36.97 2.32
626 1231 4.384247 CGAGACAGCCTTCGATAAATGATC 59.616 45.833 0.00 0.00 0.00 2.92
642 1247 9.502145 GATAAATGATCGCTCATGTAAAACAAA 57.498 29.630 1.90 0.00 41.34 2.83
643 1248 9.853555 ATAAATGATCGCTCATGTAAAACAAAA 57.146 25.926 1.90 0.00 41.34 2.44
644 1249 8.761575 AAATGATCGCTCATGTAAAACAAAAT 57.238 26.923 1.90 0.00 41.34 1.82
645 1250 8.761575 AATGATCGCTCATGTAAAACAAAATT 57.238 26.923 1.90 0.00 41.34 1.82
646 1251 7.565450 TGATCGCTCATGTAAAACAAAATTG 57.435 32.000 0.00 0.00 0.00 2.32
649 1254 7.388290 TCGCTCATGTAAAACAAAATTGAAC 57.612 32.000 0.00 0.00 0.00 3.18
650 1255 7.199766 TCGCTCATGTAAAACAAAATTGAACT 58.800 30.769 0.00 0.00 0.00 3.01
681 1286 5.856986 CACGAGACTCATAAAACTCTTCGAA 59.143 40.000 2.82 0.00 0.00 3.71
684 1289 7.096147 ACGAGACTCATAAAACTCTTCGAAAAC 60.096 37.037 0.00 0.00 0.00 2.43
685 1290 7.106663 AGACTCATAAAACTCTTCGAAAACG 57.893 36.000 0.00 0.00 0.00 3.60
686 1291 6.921857 AGACTCATAAAACTCTTCGAAAACGA 59.078 34.615 0.00 0.00 0.00 3.85
687 1292 7.437267 AGACTCATAAAACTCTTCGAAAACGAA 59.563 33.333 0.00 0.00 0.00 3.85
688 1293 8.084590 ACTCATAAAACTCTTCGAAAACGAAT 57.915 30.769 0.00 0.00 0.00 3.34
691 1296 9.414295 TCATAAAACTCTTCGAAAACGAATCTA 57.586 29.630 0.00 0.00 0.00 1.98
692 1297 9.676899 CATAAAACTCTTCGAAAACGAATCTAG 57.323 33.333 0.00 6.71 0.00 2.43
694 1299 6.692232 AACTCTTCGAAAACGAATCTAGTG 57.308 37.500 0.00 0.00 0.00 2.74
695 1300 6.010294 ACTCTTCGAAAACGAATCTAGTGA 57.990 37.500 0.00 0.00 0.00 3.41
696 1301 5.857517 ACTCTTCGAAAACGAATCTAGTGAC 59.142 40.000 0.00 0.00 0.00 3.67
698 1303 6.210796 TCTTCGAAAACGAATCTAGTGACAA 58.789 36.000 0.00 0.00 0.00 3.18
700 1305 5.283294 TCGAAAACGAATCTAGTGACAACA 58.717 37.500 0.00 0.00 0.00 3.33
701 1306 5.749588 TCGAAAACGAATCTAGTGACAACAA 59.250 36.000 0.00 0.00 0.00 2.83
702 1307 6.422701 TCGAAAACGAATCTAGTGACAACAAT 59.577 34.615 0.00 0.00 0.00 2.71
703 1308 7.042321 TCGAAAACGAATCTAGTGACAACAATT 60.042 33.333 0.00 0.00 0.00 2.32
705 1310 6.481954 AACGAATCTAGTGACAACAATTCC 57.518 37.500 0.00 0.00 0.00 3.01
706 1311 5.794894 ACGAATCTAGTGACAACAATTCCT 58.205 37.500 0.00 0.00 0.00 3.36
707 1312 5.639506 ACGAATCTAGTGACAACAATTCCTG 59.360 40.000 0.00 0.00 0.00 3.86
708 1313 5.639506 CGAATCTAGTGACAACAATTCCTGT 59.360 40.000 0.00 0.00 41.27 4.00
709 1314 6.183360 CGAATCTAGTGACAACAATTCCTGTC 60.183 42.308 8.80 8.80 41.93 3.51
713 1318 2.912771 TGACAACAATTCCTGTCACGT 58.087 42.857 12.91 0.00 45.31 4.49
714 1319 4.061357 TGACAACAATTCCTGTCACGTA 57.939 40.909 12.91 0.00 45.31 3.57
715 1320 4.443621 TGACAACAATTCCTGTCACGTAA 58.556 39.130 12.91 0.00 45.31 3.18
716 1321 4.876679 TGACAACAATTCCTGTCACGTAAA 59.123 37.500 12.91 0.00 45.31 2.01
717 1322 5.164606 ACAACAATTCCTGTCACGTAAAC 57.835 39.130 0.00 0.00 37.23 2.01
718 1323 4.879545 ACAACAATTCCTGTCACGTAAACT 59.120 37.500 0.00 0.00 37.23 2.66
719 1324 5.355910 ACAACAATTCCTGTCACGTAAACTT 59.644 36.000 0.00 0.00 37.23 2.66
722 1327 3.441496 TTCCTGTCACGTAAACTTCGT 57.559 42.857 0.00 0.00 42.33 3.85
723 1328 4.566545 TTCCTGTCACGTAAACTTCGTA 57.433 40.909 0.00 0.00 39.55 3.43
724 1329 4.151258 TCCTGTCACGTAAACTTCGTAG 57.849 45.455 0.00 0.00 39.55 3.51
728 1333 1.067635 TCACGTAAACTTCGTAGGGCC 60.068 52.381 0.00 0.00 39.55 5.80
729 1334 0.247460 ACGTAAACTTCGTAGGGCCC 59.753 55.000 16.46 16.46 39.78 5.80
730 1335 0.247185 CGTAAACTTCGTAGGGCCCA 59.753 55.000 27.56 7.27 0.00 5.36
731 1336 1.338011 CGTAAACTTCGTAGGGCCCAA 60.338 52.381 27.56 8.55 0.00 4.12
732 1337 2.353323 GTAAACTTCGTAGGGCCCAAG 58.647 52.381 27.56 20.97 0.00 3.61
733 1338 1.061546 AAACTTCGTAGGGCCCAAGA 58.938 50.000 27.56 17.32 0.00 3.02
734 1339 1.061546 AACTTCGTAGGGCCCAAGAA 58.938 50.000 27.56 23.22 0.00 2.52
735 1340 1.286248 ACTTCGTAGGGCCCAAGAAT 58.714 50.000 27.56 4.81 0.00 2.40
736 1341 1.209747 ACTTCGTAGGGCCCAAGAATC 59.790 52.381 27.56 6.19 0.00 2.52
737 1342 1.209504 CTTCGTAGGGCCCAAGAATCA 59.790 52.381 27.56 4.27 0.00 2.57
739 1344 1.843851 TCGTAGGGCCCAAGAATCAAT 59.156 47.619 27.56 1.16 0.00 2.57
741 1346 3.456644 TCGTAGGGCCCAAGAATCAATTA 59.543 43.478 27.56 0.00 0.00 1.40
744 1349 3.635591 AGGGCCCAAGAATCAATTAGTG 58.364 45.455 27.56 0.00 0.00 2.74
745 1350 3.269381 AGGGCCCAAGAATCAATTAGTGA 59.731 43.478 27.56 0.00 41.67 3.41
746 1351 4.023291 GGGCCCAAGAATCAATTAGTGAA 58.977 43.478 19.95 0.00 40.50 3.18
747 1352 4.651045 GGGCCCAAGAATCAATTAGTGAAT 59.349 41.667 19.95 0.00 40.50 2.57
751 1356 7.099120 GCCCAAGAATCAATTAGTGAATGTTT 58.901 34.615 0.00 0.00 40.50 2.83
753 1358 9.143631 CCCAAGAATCAATTAGTGAATGTTTTC 57.856 33.333 0.00 0.00 40.50 2.29
756 1361 9.831737 AAGAATCAATTAGTGAATGTTTTCTCG 57.168 29.630 0.00 0.00 40.50 4.04
757 1362 9.219603 AGAATCAATTAGTGAATGTTTTCTCGA 57.780 29.630 0.00 0.00 40.50 4.04
759 1364 7.364522 TCAATTAGTGAATGTTTTCTCGAGG 57.635 36.000 13.56 0.00 31.51 4.63
760 1365 7.158697 TCAATTAGTGAATGTTTTCTCGAGGA 58.841 34.615 13.56 0.00 31.51 3.71
761 1366 7.659799 TCAATTAGTGAATGTTTTCTCGAGGAA 59.340 33.333 13.56 7.48 31.51 3.36
762 1367 8.454106 CAATTAGTGAATGTTTTCTCGAGGAAT 58.546 33.333 13.56 0.00 33.53 3.01
763 1368 9.667107 AATTAGTGAATGTTTTCTCGAGGAATA 57.333 29.630 13.56 6.95 33.53 1.75
766 1371 8.567285 AGTGAATGTTTTCTCGAGGAATAAAT 57.433 30.769 13.56 1.49 33.53 1.40
767 1372 9.014297 AGTGAATGTTTTCTCGAGGAATAAATT 57.986 29.630 13.56 10.11 33.53 1.82
768 1373 9.626045 GTGAATGTTTTCTCGAGGAATAAATTT 57.374 29.630 13.56 0.00 33.53 1.82
769 1374 9.624697 TGAATGTTTTCTCGAGGAATAAATTTG 57.375 29.630 13.56 0.00 33.53 2.32
770 1375 8.466086 AATGTTTTCTCGAGGAATAAATTTGC 57.534 30.769 13.56 0.00 33.53 3.68
771 1376 7.214467 TGTTTTCTCGAGGAATAAATTTGCT 57.786 32.000 13.56 0.00 33.53 3.91
772 1377 7.657336 TGTTTTCTCGAGGAATAAATTTGCTT 58.343 30.769 13.56 0.00 33.53 3.91
774 1379 8.427774 GTTTTCTCGAGGAATAAATTTGCTTTG 58.572 33.333 13.56 0.00 33.53 2.77
775 1380 6.817765 TCTCGAGGAATAAATTTGCTTTGT 57.182 33.333 13.56 0.00 0.00 2.83
776 1381 6.611381 TCTCGAGGAATAAATTTGCTTTGTG 58.389 36.000 13.56 0.00 0.00 3.33
778 1383 6.744112 TCGAGGAATAAATTTGCTTTGTGTT 58.256 32.000 0.00 0.00 0.00 3.32
779 1384 7.206687 TCGAGGAATAAATTTGCTTTGTGTTT 58.793 30.769 0.00 0.00 0.00 2.83
780 1385 7.708752 TCGAGGAATAAATTTGCTTTGTGTTTT 59.291 29.630 0.00 0.00 0.00 2.43
781 1386 7.793427 CGAGGAATAAATTTGCTTTGTGTTTTG 59.207 33.333 0.00 0.00 0.00 2.44
782 1387 8.729805 AGGAATAAATTTGCTTTGTGTTTTGA 57.270 26.923 0.00 0.00 0.00 2.69
783 1388 9.171877 AGGAATAAATTTGCTTTGTGTTTTGAA 57.828 25.926 0.00 0.00 0.00 2.69
784 1389 9.780413 GGAATAAATTTGCTTTGTGTTTTGAAA 57.220 25.926 0.00 0.00 0.00 2.69
790 1395 9.719279 AATTTGCTTTGTGTTTTGAAATGTATG 57.281 25.926 0.00 0.00 0.00 2.39
791 1396 6.841443 TGCTTTGTGTTTTGAAATGTATGG 57.159 33.333 0.00 0.00 0.00 2.74
792 1397 6.577103 TGCTTTGTGTTTTGAAATGTATGGA 58.423 32.000 0.00 0.00 0.00 3.41
793 1398 6.700960 TGCTTTGTGTTTTGAAATGTATGGAG 59.299 34.615 0.00 0.00 0.00 3.86
794 1399 6.701400 GCTTTGTGTTTTGAAATGTATGGAGT 59.299 34.615 0.00 0.00 0.00 3.85
795 1400 7.865385 GCTTTGTGTTTTGAAATGTATGGAGTA 59.135 33.333 0.00 0.00 0.00 2.59
796 1401 9.912634 CTTTGTGTTTTGAAATGTATGGAGTAT 57.087 29.630 0.00 0.00 0.00 2.12
802 1407 9.698617 GTTTTGAAATGTATGGAGTATACGTTC 57.301 33.333 0.00 5.95 46.01 3.95
804 1409 9.661563 TTTGAAATGTATGGAGTATACGTTCTT 57.338 29.630 0.00 0.00 46.01 2.52
806 1411 9.093970 TGAAATGTATGGAGTATACGTTCTTTG 57.906 33.333 0.00 0.00 46.01 2.77
808 1413 8.644318 AATGTATGGAGTATACGTTCTTTGAC 57.356 34.615 0.00 0.00 44.37 3.18
809 1414 7.160547 TGTATGGAGTATACGTTCTTTGACA 57.839 36.000 0.00 0.00 43.78 3.58
810 1415 7.778083 TGTATGGAGTATACGTTCTTTGACAT 58.222 34.615 0.00 0.00 43.78 3.06
811 1416 7.919091 TGTATGGAGTATACGTTCTTTGACATC 59.081 37.037 0.00 0.00 43.78 3.06
812 1417 6.275494 TGGAGTATACGTTCTTTGACATCA 57.725 37.500 0.00 0.00 0.00 3.07
813 1418 6.330278 TGGAGTATACGTTCTTTGACATCAG 58.670 40.000 0.00 0.00 0.00 2.90
814 1419 5.749109 GGAGTATACGTTCTTTGACATCAGG 59.251 44.000 0.00 0.00 0.00 3.86
815 1420 5.661458 AGTATACGTTCTTTGACATCAGGG 58.339 41.667 0.00 0.00 0.00 4.45
816 1421 1.523758 ACGTTCTTTGACATCAGGGC 58.476 50.000 0.00 0.00 0.00 5.19
817 1422 0.804989 CGTTCTTTGACATCAGGGCC 59.195 55.000 0.00 0.00 0.00 5.80
818 1423 0.804989 GTTCTTTGACATCAGGGCCG 59.195 55.000 0.00 0.00 0.00 6.13
819 1424 0.322456 TTCTTTGACATCAGGGCCGG 60.322 55.000 0.00 0.00 0.00 6.13
821 1426 2.196997 CTTTGACATCAGGGCCGGGA 62.197 60.000 2.18 3.31 0.00 5.14
822 1427 2.196997 TTTGACATCAGGGCCGGGAG 62.197 60.000 2.18 0.00 0.00 4.30
823 1428 2.764128 GACATCAGGGCCGGGAGA 60.764 66.667 2.18 0.00 0.00 3.71
824 1429 2.765807 ACATCAGGGCCGGGAGAG 60.766 66.667 2.18 3.22 0.00 3.20
825 1430 2.765807 CATCAGGGCCGGGAGAGT 60.766 66.667 2.18 0.00 0.00 3.24
827 1432 0.833834 CATCAGGGCCGGGAGAGTAT 60.834 60.000 2.18 0.00 0.00 2.12
828 1433 0.784495 ATCAGGGCCGGGAGAGTATA 59.216 55.000 2.18 0.00 0.00 1.47
829 1434 0.178970 TCAGGGCCGGGAGAGTATAC 60.179 60.000 2.18 0.00 0.00 1.47
830 1435 0.469331 CAGGGCCGGGAGAGTATACA 60.469 60.000 2.18 0.00 0.00 2.29
831 1436 0.487772 AGGGCCGGGAGAGTATACAT 59.512 55.000 2.18 0.00 0.00 2.29
832 1437 0.608640 GGGCCGGGAGAGTATACATG 59.391 60.000 2.18 0.00 0.00 3.21
834 1439 2.180276 GGCCGGGAGAGTATACATGAT 58.820 52.381 2.18 0.00 0.00 2.45
835 1440 2.567615 GGCCGGGAGAGTATACATGATT 59.432 50.000 2.18 0.00 0.00 2.57
836 1441 3.008049 GGCCGGGAGAGTATACATGATTT 59.992 47.826 2.18 0.00 0.00 2.17
837 1442 4.505039 GGCCGGGAGAGTATACATGATTTT 60.505 45.833 2.18 0.00 0.00 1.82
838 1443 5.279809 GGCCGGGAGAGTATACATGATTTTA 60.280 44.000 2.18 0.00 0.00 1.52
839 1444 6.407202 GCCGGGAGAGTATACATGATTTTAT 58.593 40.000 2.18 0.00 0.00 1.40
840 1445 6.879458 GCCGGGAGAGTATACATGATTTTATT 59.121 38.462 2.18 0.00 0.00 1.40
841 1446 8.038944 GCCGGGAGAGTATACATGATTTTATTA 58.961 37.037 2.18 0.00 0.00 0.98
870 4184 9.822185 AAACAAGTAGAGAATTTTTGCTTCATT 57.178 25.926 0.00 0.00 0.00 2.57
879 4193 8.913487 AGAATTTTTGCTTCATTTTTCTGGAT 57.087 26.923 0.00 0.00 0.00 3.41
880 4194 8.780249 AGAATTTTTGCTTCATTTTTCTGGATG 58.220 29.630 0.00 0.00 0.00 3.51
890 4204 0.881118 TTTCTGGATGCGTTGAAGGC 59.119 50.000 2.45 2.45 0.00 4.35
892 4206 2.745884 TGGATGCGTTGAAGGCGG 60.746 61.111 5.35 0.00 0.00 6.13
900 4214 1.357334 GTTGAAGGCGGCGTCAAAA 59.643 52.632 34.40 17.10 35.60 2.44
905 4219 4.128388 GGCGGCGTCAAAATGGGG 62.128 66.667 6.63 0.00 0.00 4.96
913 4227 0.893727 GTCAAAATGGGGGCACGAGT 60.894 55.000 0.00 0.00 0.00 4.18
917 4231 0.912487 AAATGGGGGCACGAGTAGGA 60.912 55.000 0.00 0.00 0.00 2.94
944 4258 0.250727 TTTCCTCCAGCAGAAACGGG 60.251 55.000 0.00 0.00 0.00 5.28
962 4276 1.723288 GGAAACCAAACCCCCAATCA 58.277 50.000 0.00 0.00 0.00 2.57
963 4277 2.265367 GGAAACCAAACCCCCAATCAT 58.735 47.619 0.00 0.00 0.00 2.45
965 4279 3.307410 GGAAACCAAACCCCCAATCATTC 60.307 47.826 0.00 0.00 0.00 2.67
967 4281 1.203237 CCAAACCCCCAATCATTCCC 58.797 55.000 0.00 0.00 0.00 3.97
968 4282 1.203237 CAAACCCCCAATCATTCCCC 58.797 55.000 0.00 0.00 0.00 4.81
969 4283 1.101195 AAACCCCCAATCATTCCCCT 58.899 50.000 0.00 0.00 0.00 4.79
970 4284 0.636647 AACCCCCAATCATTCCCCTC 59.363 55.000 0.00 0.00 0.00 4.30
971 4285 1.296662 ACCCCCAATCATTCCCCTCC 61.297 60.000 0.00 0.00 0.00 4.30
972 4286 1.543690 CCCCAATCATTCCCCTCCC 59.456 63.158 0.00 0.00 0.00 4.30
973 4287 1.543690 CCCAATCATTCCCCTCCCC 59.456 63.158 0.00 0.00 0.00 4.81
974 4288 1.001140 CCCAATCATTCCCCTCCCCT 61.001 60.000 0.00 0.00 0.00 4.79
975 4289 0.480252 CCAATCATTCCCCTCCCCTC 59.520 60.000 0.00 0.00 0.00 4.30
976 4290 0.480252 CAATCATTCCCCTCCCCTCC 59.520 60.000 0.00 0.00 0.00 4.30
977 4291 1.062488 AATCATTCCCCTCCCCTCCG 61.062 60.000 0.00 0.00 0.00 4.63
978 4292 2.271493 ATCATTCCCCTCCCCTCCGT 62.271 60.000 0.00 0.00 0.00 4.69
979 4293 2.001269 CATTCCCCTCCCCTCCGTT 61.001 63.158 0.00 0.00 0.00 4.44
980 4294 1.693103 ATTCCCCTCCCCTCCGTTC 60.693 63.158 0.00 0.00 0.00 3.95
981 4295 3.937372 TTCCCCTCCCCTCCGTTCC 62.937 68.421 0.00 0.00 0.00 3.62
982 4296 4.416601 CCCCTCCCCTCCGTTCCT 62.417 72.222 0.00 0.00 0.00 3.36
1950 12026 0.179006 GGAGCATTGAGGATGACCCC 60.179 60.000 0.00 0.00 38.03 4.95
1951 12027 0.179006 GAGCATTGAGGATGACCCCC 60.179 60.000 0.00 0.00 38.03 5.40
2000 12076 1.684869 CCCATTGCCCCTTGATTACGT 60.685 52.381 0.00 0.00 0.00 3.57
2030 12109 1.063717 CATTGGTGTAGCTGGGGGATT 60.064 52.381 0.00 0.00 0.00 3.01
2078 12160 1.140252 CCCGGAATCATACCCTTCGTT 59.860 52.381 0.73 0.00 0.00 3.85
2091 12185 2.493278 CCCTTCGTTTGAAATGCCAGAT 59.507 45.455 0.00 0.00 32.66 2.90
2239 12340 2.675658 TTGAAGGGGTAAGCTTGCTT 57.324 45.000 14.47 12.65 0.00 3.91
2268 12391 0.528924 CCTGTGTTGTCCATGCCATG 59.471 55.000 0.00 0.00 0.00 3.66
2420 15480 1.202758 TGTCCGTCCTTGAACTGCAAT 60.203 47.619 0.00 0.00 35.59 3.56
2461 15521 5.365619 TGGTTAGAGAAGTTTGAAGACACC 58.634 41.667 0.00 0.00 0.00 4.16
2466 15526 5.745227 AGAGAAGTTTGAAGACACCTTTGA 58.255 37.500 0.00 0.00 31.62 2.69
2504 15564 2.501261 ACGTCTGGGTTTTCCTTTAGC 58.499 47.619 0.00 0.00 40.46 3.09
2567 15627 8.451908 ACTAGATATAGGTTTTTGTTGCATCC 57.548 34.615 0.00 0.00 0.00 3.51
2599 15659 8.515414 ACAAGAGAATGTTCTAATTAACCTTGC 58.485 33.333 13.53 0.00 37.73 4.01
2627 15687 2.678934 CCTTCGTCCTGGGTCCGA 60.679 66.667 0.00 0.00 0.00 4.55
2642 15702 2.096406 CGACGCTGCATTTGGTCG 59.904 61.111 11.43 11.43 44.92 4.79
2660 15720 2.808543 GTCGTCCTGAAAGCAAGAATGT 59.191 45.455 0.00 0.00 0.00 2.71
2661 15721 2.807967 TCGTCCTGAAAGCAAGAATGTG 59.192 45.455 0.00 0.00 0.00 3.21
2781 15931 1.452108 GCAGGGCTTAATCCGCTGT 60.452 57.895 16.42 0.00 42.99 4.40
2811 15985 1.203758 TCATTTTGCTGCTGGCTGATG 59.796 47.619 0.00 0.00 42.39 3.07
2860 16035 1.069049 AGCAATTGTCTGTGTTTGGCC 59.931 47.619 7.40 0.00 0.00 5.36
2905 16117 2.163613 GTCCTTTTATGTCCAAAGCCCG 59.836 50.000 0.00 0.00 30.94 6.13
2974 16190 7.149973 TGAGTGCGTTAATATTAGATGGGTAC 58.850 38.462 0.00 0.00 0.00 3.34
2985 16201 0.828022 GATGGGTACATGGGTCGTCA 59.172 55.000 0.00 0.00 37.47 4.35
3023 16239 8.928448 TGCCTCATATATATTAGAGATGGGTTC 58.072 37.037 13.00 0.00 0.00 3.62
3024 16240 9.153479 GCCTCATATATATTAGAGATGGGTTCT 57.847 37.037 13.00 0.00 37.41 3.01
3026 16242 9.979578 CTCATATATATTAGAGATGGGTTCTGC 57.020 37.037 7.87 0.00 33.74 4.26
3027 16243 9.492730 TCATATATATTAGAGATGGGTTCTGCA 57.507 33.333 0.00 0.00 33.74 4.41
3028 16244 9.761504 CATATATATTAGAGATGGGTTCTGCAG 57.238 37.037 7.63 7.63 33.74 4.41
3029 16245 9.720874 ATATATATTAGAGATGGGTTCTGCAGA 57.279 33.333 13.74 13.74 33.74 4.26
3058 16281 7.762159 GCAGTCTCTCTAGCTACTGTTAATTTT 59.238 37.037 12.43 0.00 41.11 1.82
3082 16310 4.553330 TGTTTCCTTCCATGTAGTCTCC 57.447 45.455 0.00 0.00 0.00 3.71
3089 16317 4.508662 CTTCCATGTAGTCTCCCTTGTTC 58.491 47.826 0.00 0.00 0.00 3.18
3124 16352 3.115554 GGCCATTTGTAAATTGCTAGCG 58.884 45.455 10.77 0.00 37.26 4.26
3151 16673 2.607499 AGTCCTAGAGGCAGATGATGG 58.393 52.381 0.00 0.00 34.44 3.51
3153 16675 0.982704 CCTAGAGGCAGATGATGGGG 59.017 60.000 0.00 0.00 0.00 4.96
3154 16676 1.483876 CCTAGAGGCAGATGATGGGGA 60.484 57.143 0.00 0.00 0.00 4.81
3155 16677 2.549082 CTAGAGGCAGATGATGGGGAT 58.451 52.381 0.00 0.00 0.00 3.85
3156 16678 1.360185 AGAGGCAGATGATGGGGATC 58.640 55.000 0.00 0.00 0.00 3.36
3157 16679 0.327591 GAGGCAGATGATGGGGATCC 59.672 60.000 1.92 1.92 0.00 3.36
3158 16680 0.104037 AGGCAGATGATGGGGATCCT 60.104 55.000 12.58 0.00 0.00 3.24
3160 16682 1.988107 GGCAGATGATGGGGATCCTAA 59.012 52.381 12.58 0.00 0.00 2.69
3161 16683 2.026449 GGCAGATGATGGGGATCCTAAG 60.026 54.545 12.58 0.00 0.00 2.18
3162 16684 2.617532 GCAGATGATGGGGATCCTAAGC 60.618 54.545 12.58 3.54 0.00 3.09
3165 16687 4.533707 CAGATGATGGGGATCCTAAGCTTA 59.466 45.833 12.58 5.94 0.00 3.09
3166 16688 4.782156 AGATGATGGGGATCCTAAGCTTAG 59.218 45.833 24.11 24.11 0.00 2.18
3167 16689 4.213531 TGATGGGGATCCTAAGCTTAGA 57.786 45.455 30.92 18.54 32.47 2.10
3168 16690 4.163427 TGATGGGGATCCTAAGCTTAGAG 58.837 47.826 30.92 21.15 32.47 2.43
3169 16691 3.993658 TGGGGATCCTAAGCTTAGAGA 57.006 47.619 30.92 24.85 32.47 3.10
3170 16692 3.850752 TGGGGATCCTAAGCTTAGAGAG 58.149 50.000 30.92 16.57 32.47 3.20
3171 16693 3.169908 GGGGATCCTAAGCTTAGAGAGG 58.830 54.545 30.92 19.24 32.47 3.69
3172 16694 3.438816 GGGGATCCTAAGCTTAGAGAGGT 60.439 52.174 30.92 13.57 37.82 3.85
3173 16695 3.576550 GGGATCCTAAGCTTAGAGAGGTG 59.423 52.174 30.92 15.24 35.94 4.00
3174 16696 3.576550 GGATCCTAAGCTTAGAGAGGTGG 59.423 52.174 30.92 15.69 35.94 4.61
3176 16698 3.366396 TCCTAAGCTTAGAGAGGTGGTG 58.634 50.000 30.92 13.29 35.94 4.17
3178 16700 1.280457 AAGCTTAGAGAGGTGGTGGG 58.720 55.000 0.00 0.00 35.94 4.61
3180 16702 0.984995 GCTTAGAGAGGTGGTGGGTT 59.015 55.000 0.00 0.00 0.00 4.11
3182 16704 1.204941 CTTAGAGAGGTGGTGGGTTCG 59.795 57.143 0.00 0.00 0.00 3.95
3184 16706 0.471211 AGAGAGGTGGTGGGTTCGAA 60.471 55.000 0.00 0.00 0.00 3.71
3185 16707 0.037232 GAGAGGTGGTGGGTTCGAAG 60.037 60.000 0.00 0.00 0.00 3.79
3186 16708 1.003718 GAGGTGGTGGGTTCGAAGG 60.004 63.158 0.00 0.00 0.00 3.46
3187 16709 1.460689 AGGTGGTGGGTTCGAAGGA 60.461 57.895 0.00 0.00 0.00 3.36
3189 16711 0.037734 GGTGGTGGGTTCGAAGGATT 59.962 55.000 0.00 0.00 0.00 3.01
3190 16712 1.450025 GTGGTGGGTTCGAAGGATTC 58.550 55.000 0.00 0.00 43.09 2.52
3191 16713 1.003233 GTGGTGGGTTCGAAGGATTCT 59.997 52.381 0.00 0.00 44.75 2.40
3193 16715 2.107552 TGGTGGGTTCGAAGGATTCTTT 59.892 45.455 0.00 0.00 44.75 2.52
3195 16717 2.747989 GTGGGTTCGAAGGATTCTTTCC 59.252 50.000 0.00 0.00 44.75 3.13
3202 16724 3.410958 GGATTCTTTCCTCGCGGC 58.589 61.111 6.13 0.00 41.78 6.53
3203 16725 2.180862 GGATTCTTTCCTCGCGGCC 61.181 63.158 6.13 0.00 41.78 6.13
3204 16726 1.153349 GATTCTTTCCTCGCGGCCT 60.153 57.895 6.13 0.00 0.00 5.19
3208 16730 1.450312 CTTTCCTCGCGGCCTTGAT 60.450 57.895 6.13 0.00 0.00 2.57
3209 16731 1.709147 CTTTCCTCGCGGCCTTGATG 61.709 60.000 6.13 0.00 0.00 3.07
3210 16732 4.838152 TCCTCGCGGCCTTGATGC 62.838 66.667 6.13 0.00 0.00 3.91
3218 16740 3.827634 GCCTTGATGCCTAACGGG 58.172 61.111 0.00 0.00 38.36 5.28
3220 16742 0.815615 GCCTTGATGCCTAACGGGAG 60.816 60.000 0.00 0.00 37.23 4.30
3221 16743 0.179045 CCTTGATGCCTAACGGGAGG 60.179 60.000 0.58 0.58 39.88 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.515088 CATATCTAGGAGCGCCGCG 60.515 63.158 8.83 8.83 39.96 6.46
17 18 0.456995 GACATATCTAGGAGCGCCGC 60.457 60.000 2.29 0.00 39.96 6.53
20 21 2.163412 CCTCAGACATATCTAGGAGCGC 59.837 54.545 0.00 0.00 31.97 5.92
23 24 2.752354 CCGCCTCAGACATATCTAGGAG 59.248 54.545 0.00 0.00 31.97 3.69
24 25 2.796557 CCGCCTCAGACATATCTAGGA 58.203 52.381 0.00 0.00 31.97 2.94
25 26 1.203523 GCCGCCTCAGACATATCTAGG 59.796 57.143 0.00 0.00 32.25 3.02
28 29 0.470833 AGGCCGCCTCAGACATATCT 60.471 55.000 5.94 0.00 34.57 1.98
29 30 0.320247 CAGGCCGCCTCAGACATATC 60.320 60.000 9.68 0.00 0.00 1.63
30 31 1.750930 CAGGCCGCCTCAGACATAT 59.249 57.895 9.68 0.00 0.00 1.78
31 32 2.434843 CCAGGCCGCCTCAGACATA 61.435 63.158 9.68 0.00 0.00 2.29
32 33 3.790437 CCAGGCCGCCTCAGACAT 61.790 66.667 9.68 0.00 0.00 3.06
112 113 1.873591 GCAACCATTTCAGTGTCGACT 59.126 47.619 17.92 0.00 0.00 4.18
114 115 1.234821 GGCAACCATTTCAGTGTCGA 58.765 50.000 0.00 0.00 0.00 4.20
117 118 2.106566 TGTTGGCAACCATTTCAGTGT 58.893 42.857 26.31 0.00 31.53 3.55
214 215 1.150827 GCTGCTGGGTTTGCATTTTC 58.849 50.000 0.00 0.00 39.86 2.29
217 218 0.319405 GAAGCTGCTGGGTTTGCATT 59.681 50.000 1.35 0.00 39.86 3.56
218 219 1.870055 CGAAGCTGCTGGGTTTGCAT 61.870 55.000 1.35 0.00 39.86 3.96
222 223 0.465460 TTCACGAAGCTGCTGGGTTT 60.465 50.000 1.35 0.00 35.61 3.27
223 224 0.250901 ATTCACGAAGCTGCTGGGTT 60.251 50.000 1.35 0.00 38.46 4.11
226 227 1.136147 GCATTCACGAAGCTGCTGG 59.864 57.895 1.35 0.53 0.00 4.85
227 228 0.520404 AAGCATTCACGAAGCTGCTG 59.480 50.000 1.35 0.00 43.82 4.41
229 230 0.239347 ACAAGCATTCACGAAGCTGC 59.761 50.000 0.00 0.00 38.86 5.25
231 232 1.335324 GCAACAAGCATTCACGAAGCT 60.335 47.619 0.00 0.00 44.79 3.74
248 853 1.001487 CTCAACACGCCAATTCAGCAA 60.001 47.619 0.00 0.00 0.00 3.91
252 857 1.956043 GGCTCAACACGCCAATTCA 59.044 52.632 0.00 0.00 46.77 2.57
260 865 0.594796 GGCAACAAAGGCTCAACACG 60.595 55.000 0.00 0.00 0.00 4.49
273 878 4.335315 CACTAGAAAGAAGTGTTGGCAACA 59.665 41.667 28.09 28.09 41.44 3.33
283 888 8.398665 GTCAATTCAACAACACTAGAAAGAAGT 58.601 33.333 0.00 0.00 0.00 3.01
284 889 7.584123 CGTCAATTCAACAACACTAGAAAGAAG 59.416 37.037 0.00 0.00 0.00 2.85
287 892 6.628856 CACGTCAATTCAACAACACTAGAAAG 59.371 38.462 0.00 0.00 0.00 2.62
288 893 6.314152 TCACGTCAATTCAACAACACTAGAAA 59.686 34.615 0.00 0.00 0.00 2.52
289 894 5.813157 TCACGTCAATTCAACAACACTAGAA 59.187 36.000 0.00 0.00 0.00 2.10
290 895 5.353111 TCACGTCAATTCAACAACACTAGA 58.647 37.500 0.00 0.00 0.00 2.43
291 896 5.651172 TCACGTCAATTCAACAACACTAG 57.349 39.130 0.00 0.00 0.00 2.57
293 898 3.242739 GCTCACGTCAATTCAACAACACT 60.243 43.478 0.00 0.00 0.00 3.55
294 899 3.035942 GCTCACGTCAATTCAACAACAC 58.964 45.455 0.00 0.00 0.00 3.32
295 900 2.286125 CGCTCACGTCAATTCAACAACA 60.286 45.455 0.00 0.00 33.53 3.33
296 901 2.298300 CGCTCACGTCAATTCAACAAC 58.702 47.619 0.00 0.00 33.53 3.32
297 902 1.262950 CCGCTCACGTCAATTCAACAA 59.737 47.619 0.00 0.00 37.70 2.83
298 903 0.865111 CCGCTCACGTCAATTCAACA 59.135 50.000 0.00 0.00 37.70 3.33
299 904 0.452784 GCCGCTCACGTCAATTCAAC 60.453 55.000 0.00 0.00 37.70 3.18
300 905 1.866237 GCCGCTCACGTCAATTCAA 59.134 52.632 0.00 0.00 37.70 2.69
301 906 2.379634 CGCCGCTCACGTCAATTCA 61.380 57.895 0.00 0.00 37.70 2.57
302 907 2.014093 CTCGCCGCTCACGTCAATTC 62.014 60.000 0.00 0.00 37.70 2.17
303 908 2.048597 TCGCCGCTCACGTCAATT 60.049 55.556 0.00 0.00 37.70 2.32
304 909 2.507102 CTCGCCGCTCACGTCAAT 60.507 61.111 0.00 0.00 37.70 2.57
305 910 4.717629 CCTCGCCGCTCACGTCAA 62.718 66.667 0.00 0.00 37.70 3.18
324 929 0.329596 AGAAGTGGTGGCATTCCTCC 59.670 55.000 0.00 0.00 44.43 4.30
326 931 1.282157 GGTAGAAGTGGTGGCATTCCT 59.718 52.381 0.00 0.00 0.00 3.36
329 934 0.035439 CCGGTAGAAGTGGTGGCATT 60.035 55.000 0.00 0.00 0.00 3.56
340 945 4.783667 GGTGCAACACCGGTAGAA 57.216 55.556 6.87 0.00 44.95 2.10
358 963 3.362399 CTCCAGCCGTCGTCATGCT 62.362 63.158 0.00 0.00 35.25 3.79
360 965 2.021068 ATCCTCCAGCCGTCGTCATG 62.021 60.000 0.00 0.00 0.00 3.07
363 968 2.105128 CATCCTCCAGCCGTCGTC 59.895 66.667 0.00 0.00 0.00 4.20
364 969 3.461773 CCATCCTCCAGCCGTCGT 61.462 66.667 0.00 0.00 0.00 4.34
371 976 1.451567 CTGCTGTGCCATCCTCCAG 60.452 63.158 0.00 0.00 0.00 3.86
391 996 0.036306 CAACCTACTCACCACCCACC 59.964 60.000 0.00 0.00 0.00 4.61
418 1023 3.129813 CACCATCACAAGGAACATCCATG 59.870 47.826 0.00 0.00 40.81 3.66
422 1027 1.474077 GCCACCATCACAAGGAACATC 59.526 52.381 0.00 0.00 0.00 3.06
434 1039 0.941463 CGCATACGAGAGCCACCATC 60.941 60.000 0.00 0.00 43.93 3.51
440 1045 1.588861 GAAGAAACGCATACGAGAGCC 59.411 52.381 0.00 0.00 43.93 4.70
445 1050 5.886992 TCATAGAAGAAGAAACGCATACGA 58.113 37.500 0.00 0.00 43.93 3.43
449 1054 3.873952 GCCTCATAGAAGAAGAAACGCAT 59.126 43.478 0.00 0.00 0.00 4.73
450 1055 3.055819 AGCCTCATAGAAGAAGAAACGCA 60.056 43.478 0.00 0.00 0.00 5.24
451 1056 3.526534 AGCCTCATAGAAGAAGAAACGC 58.473 45.455 0.00 0.00 0.00 4.84
452 1057 5.171476 TCAAGCCTCATAGAAGAAGAAACG 58.829 41.667 0.00 0.00 0.00 3.60
455 1060 5.360999 TCGATCAAGCCTCATAGAAGAAGAA 59.639 40.000 0.00 0.00 0.00 2.52
457 1062 4.981674 GTCGATCAAGCCTCATAGAAGAAG 59.018 45.833 0.00 0.00 0.00 2.85
459 1064 3.954258 TGTCGATCAAGCCTCATAGAAGA 59.046 43.478 0.00 0.00 0.00 2.87
460 1065 4.202101 ACTGTCGATCAAGCCTCATAGAAG 60.202 45.833 0.00 0.00 0.00 2.85
463 1068 3.724508 ACTGTCGATCAAGCCTCATAG 57.275 47.619 0.00 0.00 0.00 2.23
464 1069 3.195610 ACAACTGTCGATCAAGCCTCATA 59.804 43.478 0.00 0.00 0.00 2.15
465 1070 2.027745 ACAACTGTCGATCAAGCCTCAT 60.028 45.455 0.00 0.00 0.00 2.90
467 1072 2.086054 ACAACTGTCGATCAAGCCTC 57.914 50.000 0.00 0.00 0.00 4.70
468 1073 3.525537 CATACAACTGTCGATCAAGCCT 58.474 45.455 0.00 0.00 0.00 4.58
469 1074 2.030946 GCATACAACTGTCGATCAAGCC 59.969 50.000 0.00 0.00 0.00 4.35
470 1075 2.932614 AGCATACAACTGTCGATCAAGC 59.067 45.455 0.00 0.00 0.00 4.01
471 1076 4.176271 TGAGCATACAACTGTCGATCAAG 58.824 43.478 0.00 0.00 0.00 3.02
472 1077 4.186856 TGAGCATACAACTGTCGATCAA 57.813 40.909 0.00 0.00 0.00 2.57
473 1078 3.866883 TGAGCATACAACTGTCGATCA 57.133 42.857 0.00 0.00 0.00 2.92
474 1079 5.530519 TTTTGAGCATACAACTGTCGATC 57.469 39.130 0.00 0.00 0.00 3.69
475 1080 6.072508 ACAATTTTGAGCATACAACTGTCGAT 60.073 34.615 0.00 0.00 0.00 3.59
476 1081 5.238432 ACAATTTTGAGCATACAACTGTCGA 59.762 36.000 0.00 0.00 0.00 4.20
477 1082 5.451908 ACAATTTTGAGCATACAACTGTCG 58.548 37.500 0.00 0.00 0.00 4.35
478 1083 7.584987 AGTACAATTTTGAGCATACAACTGTC 58.415 34.615 0.00 0.00 0.00 3.51
482 1087 6.151144 AGGGAGTACAATTTTGAGCATACAAC 59.849 38.462 0.00 0.00 0.00 3.32
483 1088 6.245408 AGGGAGTACAATTTTGAGCATACAA 58.755 36.000 0.00 0.00 0.00 2.41
485 1090 6.037610 CAGAGGGAGTACAATTTTGAGCATAC 59.962 42.308 0.00 0.00 0.00 2.39
487 1092 4.946157 CAGAGGGAGTACAATTTTGAGCAT 59.054 41.667 0.00 0.00 0.00 3.79
489 1094 4.327680 ACAGAGGGAGTACAATTTTGAGC 58.672 43.478 0.00 0.00 0.00 4.26
490 1095 7.661847 AGTTTACAGAGGGAGTACAATTTTGAG 59.338 37.037 0.00 0.00 0.00 3.02
491 1096 7.514721 AGTTTACAGAGGGAGTACAATTTTGA 58.485 34.615 0.00 0.00 0.00 2.69
492 1097 7.745620 AGTTTACAGAGGGAGTACAATTTTG 57.254 36.000 0.00 0.00 0.00 2.44
501 1106 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
502 1107 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
503 1108 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
504 1109 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
505 1110 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
525 1130 9.865321 TGTCACTATTTTAGTTATCTAAACGCT 57.135 29.630 5.64 0.00 43.20 5.07
554 1159 9.063615 CCCTCCGTAAACTAATATAAAAGCAAT 57.936 33.333 0.00 0.00 0.00 3.56
556 1161 7.794041 TCCCTCCGTAAACTAATATAAAAGCA 58.206 34.615 0.00 0.00 0.00 3.91
557 1162 7.930325 ACTCCCTCCGTAAACTAATATAAAAGC 59.070 37.037 0.00 0.00 0.00 3.51
563 1168 9.151177 TGAATTACTCCCTCCGTAAACTAATAT 57.849 33.333 0.00 0.00 31.36 1.28
564 1169 8.537728 TGAATTACTCCCTCCGTAAACTAATA 57.462 34.615 0.00 0.00 31.36 0.98
565 1170 7.427989 TGAATTACTCCCTCCGTAAACTAAT 57.572 36.000 0.00 0.00 31.36 1.73
566 1171 6.855763 TGAATTACTCCCTCCGTAAACTAA 57.144 37.500 0.00 0.00 31.36 2.24
567 1172 8.716674 ATATGAATTACTCCCTCCGTAAACTA 57.283 34.615 0.00 0.00 31.36 2.24
570 1175 9.116067 CAAAATATGAATTACTCCCTCCGTAAA 57.884 33.333 0.00 0.00 31.36 2.01
571 1176 8.487848 TCAAAATATGAATTACTCCCTCCGTAA 58.512 33.333 0.00 0.00 34.30 3.18
574 1179 7.986085 ATCAAAATATGAATTACTCCCTCCG 57.014 36.000 0.00 0.00 42.54 4.63
585 1190 8.768955 GCTGTCTCGACTTATCAAAATATGAAT 58.231 33.333 0.00 0.00 42.54 2.57
586 1191 7.224753 GGCTGTCTCGACTTATCAAAATATGAA 59.775 37.037 0.00 0.00 42.54 2.57
587 1192 6.701841 GGCTGTCTCGACTTATCAAAATATGA 59.298 38.462 0.00 0.00 43.67 2.15
589 1194 6.821388 AGGCTGTCTCGACTTATCAAAATAT 58.179 36.000 0.00 0.00 0.00 1.28
590 1195 6.222038 AGGCTGTCTCGACTTATCAAAATA 57.778 37.500 0.00 0.00 0.00 1.40
592 1197 4.537135 AGGCTGTCTCGACTTATCAAAA 57.463 40.909 0.00 0.00 0.00 2.44
593 1198 4.495422 GAAGGCTGTCTCGACTTATCAAA 58.505 43.478 0.00 0.00 30.84 2.69
594 1199 3.427638 CGAAGGCTGTCTCGACTTATCAA 60.428 47.826 0.86 0.00 30.84 2.57
595 1200 2.097629 CGAAGGCTGTCTCGACTTATCA 59.902 50.000 0.86 0.00 30.84 2.15
596 1201 2.355132 TCGAAGGCTGTCTCGACTTATC 59.645 50.000 5.71 0.00 30.84 1.75
597 1202 2.366533 TCGAAGGCTGTCTCGACTTAT 58.633 47.619 5.71 0.00 30.84 1.73
598 1203 1.817357 TCGAAGGCTGTCTCGACTTA 58.183 50.000 5.71 0.00 30.84 2.24
599 1204 1.178276 ATCGAAGGCTGTCTCGACTT 58.822 50.000 11.58 0.00 37.44 3.01
601 1206 2.846039 TTATCGAAGGCTGTCTCGAC 57.154 50.000 11.58 0.00 37.44 4.20
602 1207 3.380320 TCATTTATCGAAGGCTGTCTCGA 59.620 43.478 11.72 11.72 38.98 4.04
603 1208 3.706698 TCATTTATCGAAGGCTGTCTCG 58.293 45.455 0.70 0.70 0.00 4.04
616 1221 9.502145 TTTGTTTTACATGAGCGATCATTTATC 57.498 29.630 14.62 6.79 0.00 1.75
617 1222 9.853555 TTTTGTTTTACATGAGCGATCATTTAT 57.146 25.926 14.62 5.26 0.00 1.40
618 1223 9.853555 ATTTTGTTTTACATGAGCGATCATTTA 57.146 25.926 14.62 9.62 0.00 1.40
619 1224 8.761575 ATTTTGTTTTACATGAGCGATCATTT 57.238 26.923 14.62 10.78 0.00 2.32
620 1225 8.649841 CAATTTTGTTTTACATGAGCGATCATT 58.350 29.630 14.62 8.36 0.00 2.57
621 1226 8.028354 TCAATTTTGTTTTACATGAGCGATCAT 58.972 29.630 11.05 11.05 0.00 2.45
622 1227 7.366513 TCAATTTTGTTTTACATGAGCGATCA 58.633 30.769 5.53 5.53 0.00 2.92
623 1228 7.795431 TCAATTTTGTTTTACATGAGCGATC 57.205 32.000 0.00 0.00 0.00 3.69
626 1231 7.393551 AGTTCAATTTTGTTTTACATGAGCG 57.606 32.000 0.00 0.00 0.00 5.03
653 1258 7.858382 CGAAGAGTTTTATGAGTCTCGTGATAT 59.142 37.037 4.73 0.00 32.90 1.63
654 1259 7.065443 TCGAAGAGTTTTATGAGTCTCGTGATA 59.935 37.037 4.73 0.00 32.90 2.15
656 1261 5.180680 TCGAAGAGTTTTATGAGTCTCGTGA 59.819 40.000 4.73 0.00 32.90 4.35
657 1262 5.391449 TCGAAGAGTTTTATGAGTCTCGTG 58.609 41.667 4.73 0.00 32.90 4.35
658 1263 5.624344 TCGAAGAGTTTTATGAGTCTCGT 57.376 39.130 0.00 0.00 32.90 4.18
659 1264 6.929587 TTTCGAAGAGTTTTATGAGTCTCG 57.070 37.500 0.00 0.00 38.43 4.04
678 1283 5.570262 TGTTGTCACTAGATTCGTTTTCG 57.430 39.130 0.00 0.00 45.64 3.46
681 1286 6.710744 AGGAATTGTTGTCACTAGATTCGTTT 59.289 34.615 0.00 0.00 0.00 3.60
684 1289 5.639506 ACAGGAATTGTTGTCACTAGATTCG 59.360 40.000 0.00 0.00 36.31 3.34
685 1290 6.650807 TGACAGGAATTGTTGTCACTAGATTC 59.349 38.462 14.47 0.00 46.27 2.52
686 1291 6.533730 TGACAGGAATTGTTGTCACTAGATT 58.466 36.000 14.47 0.00 46.27 2.40
687 1292 6.114187 TGACAGGAATTGTTGTCACTAGAT 57.886 37.500 14.47 0.00 46.27 1.98
688 1293 5.545063 TGACAGGAATTGTTGTCACTAGA 57.455 39.130 14.47 0.00 46.27 2.43
694 1299 5.007332 AGTTTACGTGACAGGAATTGTTGTC 59.993 40.000 0.00 10.54 41.05 3.18
695 1300 4.879545 AGTTTACGTGACAGGAATTGTTGT 59.120 37.500 0.00 0.00 41.05 3.32
696 1301 5.418310 AGTTTACGTGACAGGAATTGTTG 57.582 39.130 0.00 0.00 41.05 3.33
698 1303 4.210537 CGAAGTTTACGTGACAGGAATTGT 59.789 41.667 0.00 0.00 44.55 2.71
700 1305 4.374399 ACGAAGTTTACGTGACAGGAATT 58.626 39.130 0.00 0.00 37.78 2.17
701 1306 3.986277 ACGAAGTTTACGTGACAGGAAT 58.014 40.909 0.00 0.00 37.78 3.01
702 1307 3.441496 ACGAAGTTTACGTGACAGGAA 57.559 42.857 0.00 0.00 37.78 3.36
703 1308 3.058016 CCTACGAAGTTTACGTGACAGGA 60.058 47.826 0.00 0.00 37.78 3.86
705 1310 3.240069 CCCTACGAAGTTTACGTGACAG 58.760 50.000 0.00 0.00 37.78 3.51
706 1311 2.607771 GCCCTACGAAGTTTACGTGACA 60.608 50.000 0.00 0.00 37.78 3.58
707 1312 1.988467 GCCCTACGAAGTTTACGTGAC 59.012 52.381 0.00 0.00 37.78 3.67
708 1313 1.067635 GGCCCTACGAAGTTTACGTGA 60.068 52.381 0.00 0.00 37.78 4.35
709 1314 1.353076 GGCCCTACGAAGTTTACGTG 58.647 55.000 0.00 0.00 37.78 4.49
710 1315 0.247460 GGGCCCTACGAAGTTTACGT 59.753 55.000 17.04 0.00 37.78 3.57
711 1316 0.247185 TGGGCCCTACGAAGTTTACG 59.753 55.000 25.70 0.00 37.78 3.18
713 1318 2.259012 TCTTGGGCCCTACGAAGTTTA 58.741 47.619 25.70 0.00 37.78 2.01
714 1319 1.061546 TCTTGGGCCCTACGAAGTTT 58.938 50.000 25.70 0.00 37.78 2.66
715 1320 1.061546 TTCTTGGGCCCTACGAAGTT 58.938 50.000 25.70 0.00 37.78 2.66
717 1322 1.209504 TGATTCTTGGGCCCTACGAAG 59.790 52.381 25.70 18.22 0.00 3.79
718 1323 1.281419 TGATTCTTGGGCCCTACGAA 58.719 50.000 25.70 21.47 0.00 3.85
719 1324 1.281419 TTGATTCTTGGGCCCTACGA 58.719 50.000 25.70 13.74 0.00 3.43
722 1327 4.476846 TCACTAATTGATTCTTGGGCCCTA 59.523 41.667 25.70 15.88 0.00 3.53
723 1328 3.269381 TCACTAATTGATTCTTGGGCCCT 59.731 43.478 25.70 0.15 0.00 5.19
724 1329 3.631250 TCACTAATTGATTCTTGGGCCC 58.369 45.455 17.59 17.59 0.00 5.80
728 1333 9.918630 AGAAAACATTCACTAATTGATTCTTGG 57.081 29.630 0.00 0.00 32.84 3.61
730 1335 9.831737 CGAGAAAACATTCACTAATTGATTCTT 57.168 29.630 0.00 0.00 32.84 2.52
731 1336 9.219603 TCGAGAAAACATTCACTAATTGATTCT 57.780 29.630 0.00 0.00 32.84 2.40
732 1337 9.483062 CTCGAGAAAACATTCACTAATTGATTC 57.517 33.333 6.58 0.00 32.84 2.52
733 1338 8.454106 CCTCGAGAAAACATTCACTAATTGATT 58.546 33.333 15.71 0.00 32.84 2.57
734 1339 7.824289 TCCTCGAGAAAACATTCACTAATTGAT 59.176 33.333 15.71 0.00 32.84 2.57
735 1340 7.158697 TCCTCGAGAAAACATTCACTAATTGA 58.841 34.615 15.71 0.00 0.00 2.57
736 1341 7.364522 TCCTCGAGAAAACATTCACTAATTG 57.635 36.000 15.71 0.00 0.00 2.32
737 1342 7.979444 TTCCTCGAGAAAACATTCACTAATT 57.021 32.000 15.71 0.00 0.00 1.40
739 1344 9.496873 TTTATTCCTCGAGAAAACATTCACTAA 57.503 29.630 15.71 0.00 38.21 2.24
741 1346 7.979444 TTTATTCCTCGAGAAAACATTCACT 57.021 32.000 15.71 0.00 38.21 3.41
744 1349 8.587111 GCAAATTTATTCCTCGAGAAAACATTC 58.413 33.333 15.71 0.00 38.21 2.67
745 1350 8.306761 AGCAAATTTATTCCTCGAGAAAACATT 58.693 29.630 15.71 2.12 38.21 2.71
746 1351 7.830739 AGCAAATTTATTCCTCGAGAAAACAT 58.169 30.769 15.71 0.68 38.21 2.71
747 1352 7.214467 AGCAAATTTATTCCTCGAGAAAACA 57.786 32.000 15.71 0.00 38.21 2.83
751 1356 7.083858 CACAAAGCAAATTTATTCCTCGAGAA 58.916 34.615 15.71 6.89 39.32 2.87
753 1358 6.381801 ACACAAAGCAAATTTATTCCTCGAG 58.618 36.000 5.13 5.13 0.00 4.04
755 1360 7.406799 AAACACAAAGCAAATTTATTCCTCG 57.593 32.000 0.00 0.00 0.00 4.63
756 1361 8.825745 TCAAAACACAAAGCAAATTTATTCCTC 58.174 29.630 0.00 0.00 0.00 3.71
757 1362 8.729805 TCAAAACACAAAGCAAATTTATTCCT 57.270 26.923 0.00 0.00 0.00 3.36
766 1371 7.550551 TCCATACATTTCAAAACACAAAGCAAA 59.449 29.630 0.00 0.00 0.00 3.68
767 1372 7.044181 TCCATACATTTCAAAACACAAAGCAA 58.956 30.769 0.00 0.00 0.00 3.91
768 1373 6.577103 TCCATACATTTCAAAACACAAAGCA 58.423 32.000 0.00 0.00 0.00 3.91
769 1374 6.701400 ACTCCATACATTTCAAAACACAAAGC 59.299 34.615 0.00 0.00 0.00 3.51
770 1375 9.912634 ATACTCCATACATTTCAAAACACAAAG 57.087 29.630 0.00 0.00 0.00 2.77
774 1379 8.662141 ACGTATACTCCATACATTTCAAAACAC 58.338 33.333 0.56 0.00 39.71 3.32
775 1380 8.780846 ACGTATACTCCATACATTTCAAAACA 57.219 30.769 0.56 0.00 39.71 2.83
776 1381 9.698617 GAACGTATACTCCATACATTTCAAAAC 57.301 33.333 0.56 0.00 39.71 2.43
778 1383 9.661563 AAGAACGTATACTCCATACATTTCAAA 57.338 29.630 0.56 0.00 39.71 2.69
779 1384 9.661563 AAAGAACGTATACTCCATACATTTCAA 57.338 29.630 0.56 0.00 39.71 2.69
780 1385 9.093970 CAAAGAACGTATACTCCATACATTTCA 57.906 33.333 0.56 0.00 39.71 2.69
781 1386 9.309516 TCAAAGAACGTATACTCCATACATTTC 57.690 33.333 0.56 0.00 39.71 2.17
782 1387 9.095065 GTCAAAGAACGTATACTCCATACATTT 57.905 33.333 0.56 0.00 39.71 2.32
783 1388 8.255206 TGTCAAAGAACGTATACTCCATACATT 58.745 33.333 0.56 0.00 39.71 2.71
784 1389 7.778083 TGTCAAAGAACGTATACTCCATACAT 58.222 34.615 0.56 0.00 39.71 2.29
785 1390 7.160547 TGTCAAAGAACGTATACTCCATACA 57.839 36.000 0.56 0.00 39.71 2.29
786 1391 7.919091 TGATGTCAAAGAACGTATACTCCATAC 59.081 37.037 0.56 0.00 36.85 2.39
787 1392 8.002984 TGATGTCAAAGAACGTATACTCCATA 57.997 34.615 0.56 0.00 0.00 2.74
788 1393 6.873997 TGATGTCAAAGAACGTATACTCCAT 58.126 36.000 0.56 0.00 0.00 3.41
790 1395 5.749109 CCTGATGTCAAAGAACGTATACTCC 59.251 44.000 0.56 0.00 0.00 3.85
791 1396 5.749109 CCCTGATGTCAAAGAACGTATACTC 59.251 44.000 0.56 0.00 0.00 2.59
792 1397 5.661458 CCCTGATGTCAAAGAACGTATACT 58.339 41.667 0.56 0.00 0.00 2.12
793 1398 4.270325 GCCCTGATGTCAAAGAACGTATAC 59.730 45.833 0.00 0.00 0.00 1.47
794 1399 4.439057 GCCCTGATGTCAAAGAACGTATA 58.561 43.478 0.00 0.00 0.00 1.47
795 1400 3.270877 GCCCTGATGTCAAAGAACGTAT 58.729 45.455 0.00 0.00 0.00 3.06
796 1401 2.614481 GGCCCTGATGTCAAAGAACGTA 60.614 50.000 0.00 0.00 0.00 3.57
798 1403 0.804989 GGCCCTGATGTCAAAGAACG 59.195 55.000 0.00 0.00 0.00 3.95
801 1406 1.299648 CCGGCCCTGATGTCAAAGA 59.700 57.895 0.00 0.00 0.00 2.52
802 1407 1.750399 CCCGGCCCTGATGTCAAAG 60.750 63.158 0.00 0.00 0.00 2.77
804 1409 2.609299 TCCCGGCCCTGATGTCAA 60.609 61.111 0.00 0.00 0.00 3.18
806 1411 2.764128 TCTCCCGGCCCTGATGTC 60.764 66.667 0.00 0.00 0.00 3.06
808 1413 0.833834 ATACTCTCCCGGCCCTGATG 60.834 60.000 0.00 0.00 0.00 3.07
809 1414 0.784495 TATACTCTCCCGGCCCTGAT 59.216 55.000 0.00 0.00 0.00 2.90
810 1415 0.178970 GTATACTCTCCCGGCCCTGA 60.179 60.000 0.00 0.00 0.00 3.86
811 1416 0.469331 TGTATACTCTCCCGGCCCTG 60.469 60.000 4.17 0.00 0.00 4.45
812 1417 0.487772 ATGTATACTCTCCCGGCCCT 59.512 55.000 4.17 0.00 0.00 5.19
813 1418 0.608640 CATGTATACTCTCCCGGCCC 59.391 60.000 4.17 0.00 0.00 5.80
814 1419 1.629043 TCATGTATACTCTCCCGGCC 58.371 55.000 4.17 0.00 0.00 6.13
815 1420 3.963428 AATCATGTATACTCTCCCGGC 57.037 47.619 4.17 0.00 0.00 6.13
846 4160 9.822185 AAAATGAAGCAAAAATTCTCTACTTGT 57.178 25.926 0.00 0.00 0.00 3.16
862 4176 2.557924 ACGCATCCAGAAAAATGAAGCA 59.442 40.909 0.00 0.00 0.00 3.91
867 4181 3.922240 CCTTCAACGCATCCAGAAAAATG 59.078 43.478 0.00 0.00 0.00 2.32
870 4184 1.269448 GCCTTCAACGCATCCAGAAAA 59.731 47.619 0.00 0.00 0.00 2.29
876 4190 4.179579 GCCGCCTTCAACGCATCC 62.180 66.667 0.00 0.00 0.00 3.51
890 4204 4.128388 GCCCCCATTTTGACGCCG 62.128 66.667 0.00 0.00 0.00 6.46
892 4206 2.261361 GTGCCCCCATTTTGACGC 59.739 61.111 0.00 0.00 0.00 5.19
900 4214 0.190069 TATCCTACTCGTGCCCCCAT 59.810 55.000 0.00 0.00 0.00 4.00
905 4219 3.911661 AACGTATATCCTACTCGTGCC 57.088 47.619 0.00 0.00 35.00 5.01
913 4227 4.897076 TGCTGGAGGAAAACGTATATCCTA 59.103 41.667 14.57 2.71 43.55 2.94
917 4231 5.353394 TTCTGCTGGAGGAAAACGTATAT 57.647 39.130 0.00 0.00 0.00 0.86
944 4258 3.307410 GGAATGATTGGGGGTTTGGTTTC 60.307 47.826 0.00 0.00 0.00 2.78
952 4266 1.296662 GGAGGGGAATGATTGGGGGT 61.297 60.000 0.00 0.00 0.00 4.95
957 4271 0.480252 GGAGGGGAGGGGAATGATTG 59.520 60.000 0.00 0.00 0.00 2.67
958 4272 1.062488 CGGAGGGGAGGGGAATGATT 61.062 60.000 0.00 0.00 0.00 2.57
959 4273 1.462238 CGGAGGGGAGGGGAATGAT 60.462 63.158 0.00 0.00 0.00 2.45
962 4276 1.693103 GAACGGAGGGGAGGGGAAT 60.693 63.158 0.00 0.00 0.00 3.01
963 4277 2.285144 GAACGGAGGGGAGGGGAA 60.285 66.667 0.00 0.00 0.00 3.97
965 4279 4.416601 AGGAACGGAGGGGAGGGG 62.417 72.222 0.00 0.00 0.00 4.79
967 4281 2.038975 TGAGGAACGGAGGGGAGG 59.961 66.667 0.00 0.00 0.00 4.30
968 4282 1.305381 AGTGAGGAACGGAGGGGAG 60.305 63.158 0.00 0.00 0.00 4.30
969 4283 1.305046 GAGTGAGGAACGGAGGGGA 60.305 63.158 0.00 0.00 0.00 4.81
970 4284 2.359967 GGAGTGAGGAACGGAGGGG 61.360 68.421 0.00 0.00 0.00 4.79
971 4285 1.609501 TGGAGTGAGGAACGGAGGG 60.610 63.158 0.00 0.00 0.00 4.30
972 4286 0.900647 AGTGGAGTGAGGAACGGAGG 60.901 60.000 0.00 0.00 0.00 4.30
973 4287 0.528470 GAGTGGAGTGAGGAACGGAG 59.472 60.000 0.00 0.00 0.00 4.63
974 4288 0.898789 GGAGTGGAGTGAGGAACGGA 60.899 60.000 0.00 0.00 0.00 4.69
975 4289 1.185618 TGGAGTGGAGTGAGGAACGG 61.186 60.000 0.00 0.00 0.00 4.44
976 4290 0.038159 GTGGAGTGGAGTGAGGAACG 60.038 60.000 0.00 0.00 0.00 3.95
977 4291 0.321996 GGTGGAGTGGAGTGAGGAAC 59.678 60.000 0.00 0.00 0.00 3.62
978 4292 0.836400 GGGTGGAGTGGAGTGAGGAA 60.836 60.000 0.00 0.00 0.00 3.36
979 4293 1.229209 GGGTGGAGTGGAGTGAGGA 60.229 63.158 0.00 0.00 0.00 3.71
980 4294 2.294078 GGGGTGGAGTGGAGTGAGG 61.294 68.421 0.00 0.00 0.00 3.86
981 4295 1.127567 TTGGGGTGGAGTGGAGTGAG 61.128 60.000 0.00 0.00 0.00 3.51
982 4296 0.475632 ATTGGGGTGGAGTGGAGTGA 60.476 55.000 0.00 0.00 0.00 3.41
1162 4911 1.609794 GGAGGAAGGAGTGGTCGGT 60.610 63.158 0.00 0.00 0.00 4.69
1950 12026 1.097547 CCATTAGCGACAGCCTTGGG 61.098 60.000 0.00 0.00 46.67 4.12
1951 12027 1.097547 CCCATTAGCGACAGCCTTGG 61.098 60.000 0.00 0.00 46.67 3.61
1952 12028 1.097547 CCCCATTAGCGACAGCCTTG 61.098 60.000 0.00 0.00 46.67 3.61
2000 12076 6.464322 CCCAGCTACACCAATGATGTAATAGA 60.464 42.308 0.00 0.00 32.27 1.98
2030 12109 5.783360 TCTTGAAACCCATGTAGGAGTAAGA 59.217 40.000 0.00 0.00 41.22 2.10
2078 12160 1.281867 AGTCCGGATCTGGCATTTCAA 59.718 47.619 16.48 0.00 0.00 2.69
2091 12185 2.992124 TCAGTGAAAAACAGTCCGGA 57.008 45.000 0.00 0.00 0.00 5.14
2139 12236 1.351076 TCATGAGCTCAGTCCCACAA 58.649 50.000 22.96 0.00 0.00 3.33
2239 12340 4.211125 TGGACAACACAGGCAAAAATAGA 58.789 39.130 0.00 0.00 0.00 1.98
2268 12391 2.159544 GCAGCGTCGATCCTACCTATAC 60.160 54.545 0.00 0.00 0.00 1.47
2363 15419 2.730090 GCGTCAGCATCATTGGAAACAG 60.730 50.000 0.00 0.00 42.62 3.16
2420 15480 7.721402 TCTAACCAAGTTAACTAACCACGTAA 58.279 34.615 8.92 0.00 36.88 3.18
2504 15564 0.179059 TGGCCCACATACACGCTATG 60.179 55.000 0.00 0.23 0.00 2.23
2552 15612 6.610741 TGTTAATTGGATGCAACAAAAACC 57.389 33.333 20.63 9.81 31.85 3.27
2558 15618 6.647334 TTCTCTTGTTAATTGGATGCAACA 57.353 33.333 0.12 0.00 0.00 3.33
2592 15652 1.376037 GCCAGAGCTACGCAAGGTT 60.376 57.895 0.00 0.00 35.60 3.50
2599 15659 1.226717 GACGAAGGCCAGAGCTACG 60.227 63.158 5.01 2.04 39.73 3.51
2627 15687 2.325082 GGACGACCAAATGCAGCGT 61.325 57.895 0.00 0.00 37.97 5.07
2629 15689 0.955428 TCAGGACGACCAAATGCAGC 60.955 55.000 6.71 0.00 38.94 5.25
2642 15702 5.886960 ATACACATTCTTGCTTTCAGGAC 57.113 39.130 0.00 0.00 0.00 3.85
2781 15931 4.081406 AGCAGCAAAATGAGTCCAATACA 58.919 39.130 0.00 0.00 0.00 2.29
2811 15985 3.084039 TGTGTCATCCTTCCTTGCAATC 58.916 45.455 0.00 0.00 0.00 2.67
2959 16175 5.546499 ACGACCCATGTACCCATCTAATATT 59.454 40.000 0.00 0.00 0.00 1.28
2974 16190 1.740296 GACCGGTTGACGACCCATG 60.740 63.158 9.42 0.00 46.35 3.66
2985 16201 3.692406 GAGGCAGGTCGACCGGTT 61.692 66.667 31.08 21.47 42.08 4.44
2991 16207 7.574607 TCTCTAATATATATGAGGCAGGTCGA 58.425 38.462 7.18 0.00 0.00 4.20
3028 16244 3.312421 CAGTAGCTAGAGAGACTGCAGTC 59.688 52.174 34.82 34.82 45.08 3.51
3029 16245 3.278574 CAGTAGCTAGAGAGACTGCAGT 58.721 50.000 21.88 21.88 33.48 4.40
3058 16281 5.338381 GGAGACTACATGGAAGGAAACATGA 60.338 44.000 11.17 0.00 45.55 3.07
3066 16294 2.840651 ACAAGGGAGACTACATGGAAGG 59.159 50.000 0.00 0.00 0.00 3.46
3082 16310 3.980775 CCAAATAACAGCAACGAACAAGG 59.019 43.478 0.00 0.00 0.00 3.61
3089 16317 2.652941 ATGGCCAAATAACAGCAACG 57.347 45.000 10.96 0.00 0.00 4.10
3124 16352 1.222113 GCCTCTAGGACTTGGCACC 59.778 63.158 0.00 0.00 44.34 5.01
3151 16673 3.576550 CACCTCTCTAAGCTTAGGATCCC 59.423 52.174 28.81 0.00 33.16 3.85
3153 16675 4.038642 CACCACCTCTCTAAGCTTAGGATC 59.961 50.000 28.81 0.00 33.16 3.36
3154 16676 3.964031 CACCACCTCTCTAAGCTTAGGAT 59.036 47.826 28.81 11.43 33.16 3.24
3155 16677 3.366396 CACCACCTCTCTAAGCTTAGGA 58.634 50.000 28.81 22.79 33.16 2.94
3156 16678 2.432510 CCACCACCTCTCTAAGCTTAGG 59.567 54.545 28.81 20.13 35.14 2.69
3157 16679 2.432510 CCCACCACCTCTCTAAGCTTAG 59.567 54.545 24.90 24.90 0.00 2.18
3158 16680 2.225547 ACCCACCACCTCTCTAAGCTTA 60.226 50.000 5.94 5.94 0.00 3.09
3160 16682 0.117340 ACCCACCACCTCTCTAAGCT 59.883 55.000 0.00 0.00 0.00 3.74
3161 16683 0.984995 AACCCACCACCTCTCTAAGC 59.015 55.000 0.00 0.00 0.00 3.09
3162 16684 1.204941 CGAACCCACCACCTCTCTAAG 59.795 57.143 0.00 0.00 0.00 2.18
3165 16687 0.471211 TTCGAACCCACCACCTCTCT 60.471 55.000 0.00 0.00 0.00 3.10
3166 16688 0.037232 CTTCGAACCCACCACCTCTC 60.037 60.000 0.00 0.00 0.00 3.20
3167 16689 1.481056 CCTTCGAACCCACCACCTCT 61.481 60.000 0.00 0.00 0.00 3.69
3168 16690 1.003718 CCTTCGAACCCACCACCTC 60.004 63.158 0.00 0.00 0.00 3.85
3169 16691 0.840722 ATCCTTCGAACCCACCACCT 60.841 55.000 0.00 0.00 0.00 4.00
3170 16692 0.037734 AATCCTTCGAACCCACCACC 59.962 55.000 0.00 0.00 0.00 4.61
3171 16693 1.003233 AGAATCCTTCGAACCCACCAC 59.997 52.381 0.00 0.00 34.02 4.16
3172 16694 1.358152 AGAATCCTTCGAACCCACCA 58.642 50.000 0.00 0.00 34.02 4.17
3173 16695 2.491675 AAGAATCCTTCGAACCCACC 57.508 50.000 0.00 0.00 34.02 4.61
3174 16696 2.747989 GGAAAGAATCCTTCGAACCCAC 59.252 50.000 0.00 0.00 45.56 4.61
3202 16724 0.179045 CCTCCCGTTAGGCATCAAGG 60.179 60.000 0.00 0.00 35.76 3.61
3203 16725 3.386543 CCTCCCGTTAGGCATCAAG 57.613 57.895 0.00 0.00 35.76 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.