Multiple sequence alignment - TraesCS7A01G563000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G563000 chr7A 100.000 2973 0 0 1 2973 733376151 733373179 0.000000e+00 5491.0
1 TraesCS7A01G563000 chr7A 100.000 319 0 0 3261 3579 733372891 733372573 1.110000e-164 590.0
2 TraesCS7A01G563000 chr7A 92.417 211 13 3 111 318 733389867 733389657 7.510000e-77 298.0
3 TraesCS7A01G563000 chr4D 92.578 2277 126 15 734 2973 288357034 288354764 0.000000e+00 3229.0
4 TraesCS7A01G563000 chr4D 89.865 296 27 3 3262 3555 288354960 288354666 9.380000e-101 377.0
5 TraesCS7A01G563000 chr1B 91.923 2278 137 27 732 2973 661874930 661877196 0.000000e+00 3144.0
6 TraesCS7A01G563000 chr1B 89.297 953 78 13 1675 2605 31153766 31154716 0.000000e+00 1173.0
7 TraesCS7A01G563000 chr1B 84.589 292 26 11 3294 3579 661876982 661877260 4.550000e-69 272.0
8 TraesCS7A01G563000 chr1B 83.832 167 18 7 5 168 430029461 430029301 2.230000e-32 150.0
9 TraesCS7A01G563000 chr6A 92.198 2025 112 25 981 2973 67474593 67472583 0.000000e+00 2822.0
10 TraesCS7A01G563000 chr6A 89.630 270 17 2 728 986 67483234 67482965 2.060000e-87 333.0
11 TraesCS7A01G563000 chr5A 94.444 1440 69 8 1540 2972 678335501 678334066 0.000000e+00 2206.0
12 TraesCS7A01G563000 chr5A 89.189 777 64 7 731 1495 678336264 678335496 0.000000e+00 952.0
13 TraesCS7A01G563000 chr5A 86.646 322 28 9 3261 3579 678333329 678333020 3.420000e-90 342.0
14 TraesCS7A01G563000 chr3B 92.708 1536 94 13 1447 2973 181707707 181706181 0.000000e+00 2200.0
15 TraesCS7A01G563000 chr3B 81.901 1315 162 44 1677 2944 564784353 564785638 0.000000e+00 1040.0
16 TraesCS7A01G563000 chr3B 88.372 301 27 7 3261 3555 181706378 181706080 4.390000e-94 355.0
17 TraesCS7A01G563000 chr3B 89.352 216 15 4 732 939 564907900 564907685 7.620000e-67 265.0
18 TraesCS7A01G563000 chr3B 88.584 219 14 2 733 940 181681864 181682082 4.590000e-64 255.0
19 TraesCS7A01G563000 chr1D 94.369 1101 53 8 1875 2968 69771176 69772274 0.000000e+00 1681.0
20 TraesCS7A01G563000 chr1D 94.288 1103 55 8 1875 2973 261726367 261727465 0.000000e+00 1681.0
21 TraesCS7A01G563000 chr1D 91.265 1099 61 10 733 1802 21320523 21319431 0.000000e+00 1465.0
22 TraesCS7A01G563000 chr1D 90.386 1113 56 16 730 1814 69770089 69771178 0.000000e+00 1415.0
23 TraesCS7A01G563000 chr1D 89.586 749 34 14 732 1460 261725114 261725838 0.000000e+00 911.0
24 TraesCS7A01G563000 chr1D 91.694 602 27 10 733 1312 481168319 481167719 0.000000e+00 813.0
25 TraesCS7A01G563000 chr1D 91.500 600 30 8 733 1312 481315165 481314567 0.000000e+00 806.0
26 TraesCS7A01G563000 chr1D 87.195 328 30 10 3261 3579 21318401 21318077 2.630000e-96 363.0
27 TraesCS7A01G563000 chr2A 90.030 1314 107 18 1675 2973 155776022 155774718 0.000000e+00 1679.0
28 TraesCS7A01G563000 chr2A 91.374 313 23 4 4 313 642588548 642588237 3.300000e-115 425.0
29 TraesCS7A01G563000 chr2A 90.190 316 25 3 4 315 16908563 16908250 1.200000e-109 407.0
30 TraesCS7A01G563000 chr2A 91.827 208 13 4 114 318 642660466 642660260 1.630000e-73 287.0
31 TraesCS7A01G563000 chr2A 89.401 217 12 1 735 940 155768003 155768219 2.740000e-66 263.0
32 TraesCS7A01G563000 chr2D 93.494 1122 60 10 1858 2973 181286199 181287313 0.000000e+00 1655.0
33 TraesCS7A01G563000 chr2D 88.567 726 42 16 730 1443 647863559 647864255 0.000000e+00 843.0
34 TraesCS7A01G563000 chr2D 91.746 315 22 4 4 315 60955265 60954952 5.490000e-118 435.0
35 TraesCS7A01G563000 chr2D 90.431 209 16 4 113 318 61007091 61006884 4.550000e-69 272.0
36 TraesCS7A01G563000 chr2D 89.474 171 16 1 732 900 206635117 206634947 7.780000e-52 215.0
37 TraesCS7A01G563000 chr7D 90.827 1101 66 14 733 1814 562227110 562226026 0.000000e+00 1441.0
38 TraesCS7A01G563000 chr7D 90.390 1103 61 15 733 1814 94461975 94460897 0.000000e+00 1408.0
39 TraesCS7A01G563000 chr7D 89.865 1115 56 26 733 1814 105674032 105675122 0.000000e+00 1380.0
40 TraesCS7A01G563000 chr7D 92.744 317 20 3 1 314 141720213 141720529 4.210000e-124 455.0
41 TraesCS7A01G563000 chr7D 93.455 275 13 5 3285 3555 562225124 562224851 1.550000e-108 403.0
42 TraesCS7A01G563000 chr7D 90.236 297 23 6 3263 3555 94459992 94459698 2.020000e-102 383.0
43 TraesCS7A01G563000 chr7D 90.690 290 20 7 3263 3549 562224997 562224712 2.610000e-101 379.0
44 TraesCS7A01G563000 chr7D 89.865 296 20 8 3261 3550 562225100 562224809 4.360000e-99 372.0
45 TraesCS7A01G563000 chr7D 89.310 290 24 7 3263 3550 45627799 45628083 1.220000e-94 357.0
46 TraesCS7A01G563000 chr7D 92.308 208 13 3 114 318 141649342 141649549 3.490000e-75 292.0
47 TraesCS7A01G563000 chr6D 90.493 1115 60 23 733 1814 17866753 17867854 0.000000e+00 1430.0
48 TraesCS7A01G563000 chr2B 89.927 1102 72 21 733 1807 55923784 55922695 0.000000e+00 1384.0
49 TraesCS7A01G563000 chr2B 87.500 320 30 4 1 318 752391670 752391981 9.450000e-96 361.0
50 TraesCS7A01G563000 chr3D 91.513 978 55 9 733 1687 560368654 560369626 0.000000e+00 1321.0
51 TraesCS7A01G563000 chr3D 91.975 947 49 10 1675 2605 560369510 560370445 0.000000e+00 1303.0
52 TraesCS7A01G563000 chr3D 94.395 785 38 4 1032 1814 609965045 609965825 0.000000e+00 1201.0
53 TraesCS7A01G563000 chr3A 90.073 413 30 7 1676 2078 720611814 720612225 3.170000e-145 525.0
54 TraesCS7A01G563000 chr3A 94.444 54 3 0 416 469 497175862 497175809 2.290000e-12 84.2
55 TraesCS7A01G563000 chr5D 88.889 297 27 6 3263 3555 235204508 235204802 9.450000e-96 361.0
56 TraesCS7A01G563000 chrUn 92.814 167 12 0 4 170 314945832 314945666 3.570000e-60 243.0
57 TraesCS7A01G563000 chrUn 92.353 170 13 0 1 170 326128959 326129128 3.570000e-60 243.0
58 TraesCS7A01G563000 chrUn 92.814 167 12 0 4 170 406869729 406869563 3.570000e-60 243.0
59 TraesCS7A01G563000 chr4A 98.319 119 2 0 733 851 42242348 42242230 3.620000e-50 209.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G563000 chr7A 733372573 733376151 3578 True 3040.500000 5491 100.00000 1 3579 2 chr7A.!!$R2 3578
1 TraesCS7A01G563000 chr4D 288354666 288357034 2368 True 1803.000000 3229 91.22150 734 3555 2 chr4D.!!$R1 2821
2 TraesCS7A01G563000 chr1B 661874930 661877260 2330 False 1708.000000 3144 88.25600 732 3579 2 chr1B.!!$F2 2847
3 TraesCS7A01G563000 chr1B 31153766 31154716 950 False 1173.000000 1173 89.29700 1675 2605 1 chr1B.!!$F1 930
4 TraesCS7A01G563000 chr6A 67472583 67474593 2010 True 2822.000000 2822 92.19800 981 2973 1 chr6A.!!$R1 1992
5 TraesCS7A01G563000 chr5A 678333020 678336264 3244 True 1166.666667 2206 90.09300 731 3579 3 chr5A.!!$R1 2848
6 TraesCS7A01G563000 chr3B 181706080 181707707 1627 True 1277.500000 2200 90.54000 1447 3555 2 chr3B.!!$R2 2108
7 TraesCS7A01G563000 chr3B 564784353 564785638 1285 False 1040.000000 1040 81.90100 1677 2944 1 chr3B.!!$F2 1267
8 TraesCS7A01G563000 chr1D 69770089 69772274 2185 False 1548.000000 1681 92.37750 730 2968 2 chr1D.!!$F1 2238
9 TraesCS7A01G563000 chr1D 261725114 261727465 2351 False 1296.000000 1681 91.93700 732 2973 2 chr1D.!!$F2 2241
10 TraesCS7A01G563000 chr1D 21318077 21320523 2446 True 914.000000 1465 89.23000 733 3579 2 chr1D.!!$R3 2846
11 TraesCS7A01G563000 chr1D 481167719 481168319 600 True 813.000000 813 91.69400 733 1312 1 chr1D.!!$R1 579
12 TraesCS7A01G563000 chr1D 481314567 481315165 598 True 806.000000 806 91.50000 733 1312 1 chr1D.!!$R2 579
13 TraesCS7A01G563000 chr2A 155774718 155776022 1304 True 1679.000000 1679 90.03000 1675 2973 1 chr2A.!!$R2 1298
14 TraesCS7A01G563000 chr2D 181286199 181287313 1114 False 1655.000000 1655 93.49400 1858 2973 1 chr2D.!!$F1 1115
15 TraesCS7A01G563000 chr2D 647863559 647864255 696 False 843.000000 843 88.56700 730 1443 1 chr2D.!!$F2 713
16 TraesCS7A01G563000 chr7D 105674032 105675122 1090 False 1380.000000 1380 89.86500 733 1814 1 chr7D.!!$F2 1081
17 TraesCS7A01G563000 chr7D 94459698 94461975 2277 True 895.500000 1408 90.31300 733 3555 2 chr7D.!!$R1 2822
18 TraesCS7A01G563000 chr7D 562224712 562227110 2398 True 648.750000 1441 91.20925 733 3555 4 chr7D.!!$R2 2822
19 TraesCS7A01G563000 chr6D 17866753 17867854 1101 False 1430.000000 1430 90.49300 733 1814 1 chr6D.!!$F1 1081
20 TraesCS7A01G563000 chr2B 55922695 55923784 1089 True 1384.000000 1384 89.92700 733 1807 1 chr2B.!!$R1 1074
21 TraesCS7A01G563000 chr3D 560368654 560370445 1791 False 1312.000000 1321 91.74400 733 2605 2 chr3D.!!$F2 1872
22 TraesCS7A01G563000 chr3D 609965045 609965825 780 False 1201.000000 1201 94.39500 1032 1814 1 chr3D.!!$F1 782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
391 392 0.030297 AGGGATGGAGGAGCATGAGT 60.030 55.0 0.0 0.0 0.0 3.41 F
1112 1271 0.034896 GTGTCGTGGAGTGATGGGTT 59.965 55.0 0.0 0.0 0.0 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 2670 1.000739 CCTGGGCATCCATTGGTGT 59.999 57.895 1.86 0.0 43.11 4.16 R
2801 3387 0.454600 GTCCTACTTGATGCGTCGGA 59.545 55.000 0.58 0.0 0.00 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.308526 CCTGTGGTGCTGGACATC 57.691 61.111 0.77 0.00 38.33 3.06
18 19 1.742880 CCTGTGGTGCTGGACATCG 60.743 63.158 0.77 0.00 38.33 3.84
19 20 1.742880 CTGTGGTGCTGGACATCGG 60.743 63.158 0.77 0.00 28.88 4.18
20 21 2.436646 GTGGTGCTGGACATCGGG 60.437 66.667 0.77 0.00 28.88 5.14
21 22 3.716195 TGGTGCTGGACATCGGGG 61.716 66.667 0.77 0.00 28.88 5.73
23 24 4.408821 GTGCTGGACATCGGGGCA 62.409 66.667 0.00 0.00 0.00 5.36
24 25 4.100084 TGCTGGACATCGGGGCAG 62.100 66.667 0.00 0.00 0.00 4.85
29 30 4.899239 GACATCGGGGCAGCGGAG 62.899 72.222 0.00 0.00 0.00 4.63
40 41 4.954118 AGCGGAGGTGGTGGTGGA 62.954 66.667 0.00 0.00 36.17 4.02
41 42 4.699522 GCGGAGGTGGTGGTGGAC 62.700 72.222 0.00 0.00 0.00 4.02
42 43 3.238497 CGGAGGTGGTGGTGGACA 61.238 66.667 0.00 0.00 0.00 4.02
43 44 2.592993 CGGAGGTGGTGGTGGACAT 61.593 63.158 0.00 0.00 0.00 3.06
44 45 1.002134 GGAGGTGGTGGTGGACATG 60.002 63.158 0.00 0.00 0.00 3.21
45 46 1.002134 GAGGTGGTGGTGGACATGG 60.002 63.158 0.00 0.00 0.00 3.66
46 47 2.676471 GGTGGTGGTGGACATGGC 60.676 66.667 0.00 0.00 0.00 4.40
47 48 2.436109 GTGGTGGTGGACATGGCT 59.564 61.111 0.00 0.00 0.00 4.75
48 49 1.675641 GTGGTGGTGGACATGGCTC 60.676 63.158 0.00 0.00 0.00 4.70
49 50 2.152729 TGGTGGTGGACATGGCTCA 61.153 57.895 0.00 0.00 0.00 4.26
50 51 1.377725 GGTGGTGGACATGGCTCAG 60.378 63.158 0.00 0.00 0.00 3.35
51 52 1.376466 GTGGTGGACATGGCTCAGT 59.624 57.895 0.00 0.00 0.00 3.41
52 53 0.674895 GTGGTGGACATGGCTCAGTC 60.675 60.000 0.00 0.00 0.00 3.51
53 54 1.448540 GGTGGACATGGCTCAGTCG 60.449 63.158 0.00 0.00 35.63 4.18
54 55 2.103042 GTGGACATGGCTCAGTCGC 61.103 63.158 0.00 0.00 35.63 5.19
73 74 1.867919 CCGGGAGGTAGCTAGATGCG 61.868 65.000 0.00 0.00 46.47 4.73
78 79 3.757745 GAGGTAGCTAGATGCGATCTC 57.242 52.381 0.00 0.00 44.77 2.75
79 80 2.095213 GAGGTAGCTAGATGCGATCTCG 59.905 54.545 0.00 0.00 42.83 4.04
80 81 4.417198 GAGGTAGCTAGATGCGATCTCGT 61.417 52.174 0.00 0.00 42.83 4.18
81 82 5.861571 GAGGTAGCTAGATGCGATCTCGTT 61.862 50.000 0.00 0.00 42.83 3.85
82 83 7.584650 GAGGTAGCTAGATGCGATCTCGTTC 62.585 52.000 0.00 0.00 42.83 3.95
83 84 1.692296 GCTAGATGCGATCTCGTTCC 58.308 55.000 0.00 0.00 40.76 3.62
84 85 1.957089 CTAGATGCGATCTCGTTCCG 58.043 55.000 1.14 0.00 40.76 4.30
85 86 1.531578 CTAGATGCGATCTCGTTCCGA 59.468 52.381 1.14 0.00 40.76 4.55
86 87 0.955178 AGATGCGATCTCGTTCCGAT 59.045 50.000 1.14 0.00 42.22 4.18
87 88 1.068885 AGATGCGATCTCGTTCCGATC 60.069 52.381 1.14 0.00 42.22 3.69
88 89 0.955178 ATGCGATCTCGTTCCGATCT 59.045 50.000 1.14 0.00 42.22 2.75
89 90 1.589803 TGCGATCTCGTTCCGATCTA 58.410 50.000 1.14 0.00 42.22 1.98
90 91 1.263484 TGCGATCTCGTTCCGATCTAC 59.737 52.381 1.14 0.00 42.22 2.59
91 92 1.532007 GCGATCTCGTTCCGATCTACT 59.468 52.381 1.14 0.00 42.22 2.57
92 93 2.735663 GCGATCTCGTTCCGATCTACTA 59.264 50.000 1.14 0.00 42.22 1.82
93 94 3.186001 GCGATCTCGTTCCGATCTACTAA 59.814 47.826 1.14 0.00 42.22 2.24
94 95 4.667161 GCGATCTCGTTCCGATCTACTAAG 60.667 50.000 1.14 0.00 42.22 2.18
95 96 4.143073 CGATCTCGTTCCGATCTACTAAGG 60.143 50.000 0.00 0.00 36.10 2.69
96 97 4.412796 TCTCGTTCCGATCTACTAAGGA 57.587 45.455 0.00 0.00 34.61 3.36
97 98 4.774124 TCTCGTTCCGATCTACTAAGGAA 58.226 43.478 0.00 0.00 40.12 3.36
98 99 4.815308 TCTCGTTCCGATCTACTAAGGAAG 59.185 45.833 0.00 0.00 42.66 3.46
99 100 4.774124 TCGTTCCGATCTACTAAGGAAGA 58.226 43.478 0.00 0.00 42.66 2.87
100 101 4.815308 TCGTTCCGATCTACTAAGGAAGAG 59.185 45.833 0.00 0.00 42.66 2.85
101 102 4.023878 CGTTCCGATCTACTAAGGAAGAGG 60.024 50.000 0.00 0.00 42.66 3.69
102 103 3.488363 TCCGATCTACTAAGGAAGAGGC 58.512 50.000 0.00 0.00 0.00 4.70
103 104 3.138653 TCCGATCTACTAAGGAAGAGGCT 59.861 47.826 0.00 0.00 0.00 4.58
104 105 3.504520 CCGATCTACTAAGGAAGAGGCTC 59.495 52.174 6.34 6.34 0.00 4.70
105 106 4.394729 CGATCTACTAAGGAAGAGGCTCT 58.605 47.826 12.24 12.24 0.00 4.09
106 107 4.215399 CGATCTACTAAGGAAGAGGCTCTG 59.785 50.000 19.53 6.77 0.00 3.35
107 108 4.594675 TCTACTAAGGAAGAGGCTCTGT 57.405 45.455 19.53 12.70 0.00 3.41
108 109 4.936802 TCTACTAAGGAAGAGGCTCTGTT 58.063 43.478 19.53 14.15 0.00 3.16
109 110 6.075949 TCTACTAAGGAAGAGGCTCTGTTA 57.924 41.667 19.53 14.51 0.00 2.41
110 111 5.887035 TCTACTAAGGAAGAGGCTCTGTTAC 59.113 44.000 19.53 3.72 0.00 2.50
111 112 3.770388 ACTAAGGAAGAGGCTCTGTTACC 59.230 47.826 19.53 17.86 0.00 2.85
112 113 2.327325 AGGAAGAGGCTCTGTTACCA 57.673 50.000 19.53 0.00 0.00 3.25
113 114 2.839228 AGGAAGAGGCTCTGTTACCAT 58.161 47.619 19.53 0.00 0.00 3.55
114 115 2.503356 AGGAAGAGGCTCTGTTACCATG 59.497 50.000 19.53 0.00 0.00 3.66
115 116 2.501723 GGAAGAGGCTCTGTTACCATGA 59.498 50.000 19.53 0.00 0.00 3.07
116 117 3.055094 GGAAGAGGCTCTGTTACCATGAA 60.055 47.826 19.53 0.00 0.00 2.57
117 118 4.565652 GGAAGAGGCTCTGTTACCATGAAA 60.566 45.833 19.53 0.00 0.00 2.69
118 119 4.213564 AGAGGCTCTGTTACCATGAAAG 57.786 45.455 17.96 0.00 0.00 2.62
119 120 3.840666 AGAGGCTCTGTTACCATGAAAGA 59.159 43.478 17.96 0.00 0.00 2.52
120 121 4.472833 AGAGGCTCTGTTACCATGAAAGAT 59.527 41.667 17.96 0.00 0.00 2.40
121 122 5.663106 AGAGGCTCTGTTACCATGAAAGATA 59.337 40.000 17.96 0.00 0.00 1.98
122 123 6.156949 AGAGGCTCTGTTACCATGAAAGATAA 59.843 38.462 17.96 0.00 0.00 1.75
123 124 6.904626 AGGCTCTGTTACCATGAAAGATAAT 58.095 36.000 0.00 0.00 0.00 1.28
124 125 6.769822 AGGCTCTGTTACCATGAAAGATAATG 59.230 38.462 0.00 0.00 0.00 1.90
125 126 6.767902 GGCTCTGTTACCATGAAAGATAATGA 59.232 38.462 0.00 0.00 0.00 2.57
126 127 7.041508 GGCTCTGTTACCATGAAAGATAATGAG 60.042 40.741 0.00 0.00 0.00 2.90
127 128 7.041508 GCTCTGTTACCATGAAAGATAATGAGG 60.042 40.741 0.00 0.00 0.00 3.86
128 129 8.089625 TCTGTTACCATGAAAGATAATGAGGA 57.910 34.615 0.00 0.00 0.00 3.71
129 130 8.548025 TCTGTTACCATGAAAGATAATGAGGAA 58.452 33.333 0.00 0.00 0.00 3.36
130 131 8.737168 TGTTACCATGAAAGATAATGAGGAAG 57.263 34.615 0.00 0.00 0.00 3.46
131 132 7.283127 TGTTACCATGAAAGATAATGAGGAAGC 59.717 37.037 0.00 0.00 0.00 3.86
132 133 4.818546 ACCATGAAAGATAATGAGGAAGCG 59.181 41.667 0.00 0.00 0.00 4.68
133 134 4.818546 CCATGAAAGATAATGAGGAAGCGT 59.181 41.667 0.00 0.00 0.00 5.07
134 135 5.991606 CCATGAAAGATAATGAGGAAGCGTA 59.008 40.000 0.00 0.00 0.00 4.42
135 136 6.146837 CCATGAAAGATAATGAGGAAGCGTAG 59.853 42.308 0.00 0.00 0.00 3.51
136 137 6.465439 TGAAAGATAATGAGGAAGCGTAGA 57.535 37.500 0.00 0.00 0.00 2.59
137 138 6.873997 TGAAAGATAATGAGGAAGCGTAGAA 58.126 36.000 0.00 0.00 0.00 2.10
138 139 6.757010 TGAAAGATAATGAGGAAGCGTAGAAC 59.243 38.462 0.00 0.00 0.00 3.01
139 140 5.203060 AGATAATGAGGAAGCGTAGAACC 57.797 43.478 0.00 0.00 0.00 3.62
140 141 4.896482 AGATAATGAGGAAGCGTAGAACCT 59.104 41.667 0.00 0.00 35.29 3.50
141 142 3.983044 AATGAGGAAGCGTAGAACCTT 57.017 42.857 0.00 0.00 32.53 3.50
142 143 3.983044 ATGAGGAAGCGTAGAACCTTT 57.017 42.857 0.00 0.00 32.53 3.11
143 144 3.314541 TGAGGAAGCGTAGAACCTTTC 57.685 47.619 0.00 0.00 32.53 2.62
144 145 2.260481 GAGGAAGCGTAGAACCTTTCG 58.740 52.381 0.00 0.00 32.53 3.46
145 146 1.617357 AGGAAGCGTAGAACCTTTCGT 59.383 47.619 0.00 0.00 34.02 3.85
146 147 1.991264 GGAAGCGTAGAACCTTTCGTC 59.009 52.381 0.00 0.00 34.02 4.20
147 148 2.352519 GGAAGCGTAGAACCTTTCGTCT 60.353 50.000 0.00 0.00 34.02 4.18
148 149 2.349297 AGCGTAGAACCTTTCGTCTG 57.651 50.000 0.00 0.00 34.02 3.51
149 150 1.067776 AGCGTAGAACCTTTCGTCTGG 60.068 52.381 0.00 0.00 34.02 3.86
150 151 1.992170 CGTAGAACCTTTCGTCTGGG 58.008 55.000 0.00 0.00 34.02 4.45
151 152 1.723220 GTAGAACCTTTCGTCTGGGC 58.277 55.000 0.00 0.00 34.02 5.36
152 153 0.611714 TAGAACCTTTCGTCTGGGCC 59.388 55.000 0.00 0.00 34.02 5.80
153 154 2.032071 AACCTTTCGTCTGGGCCG 59.968 61.111 0.00 0.00 0.00 6.13
154 155 4.699522 ACCTTTCGTCTGGGCCGC 62.700 66.667 0.00 0.00 0.00 6.53
155 156 4.697756 CCTTTCGTCTGGGCCGCA 62.698 66.667 0.00 0.00 0.00 5.69
156 157 2.436646 CTTTCGTCTGGGCCGCAT 60.437 61.111 0.00 0.00 0.00 4.73
157 158 2.033448 TTTCGTCTGGGCCGCATT 59.967 55.556 0.00 0.00 0.00 3.56
158 159 1.586154 CTTTCGTCTGGGCCGCATTT 61.586 55.000 0.00 0.00 0.00 2.32
159 160 1.582610 TTTCGTCTGGGCCGCATTTC 61.583 55.000 0.00 0.00 0.00 2.17
160 161 2.436646 CGTCTGGGCCGCATTTCT 60.437 61.111 0.00 0.00 0.00 2.52
161 162 1.153449 CGTCTGGGCCGCATTTCTA 60.153 57.895 0.00 0.00 0.00 2.10
162 163 0.532862 CGTCTGGGCCGCATTTCTAT 60.533 55.000 0.00 0.00 0.00 1.98
163 164 1.270094 CGTCTGGGCCGCATTTCTATA 60.270 52.381 0.00 0.00 0.00 1.31
164 165 2.612972 CGTCTGGGCCGCATTTCTATAT 60.613 50.000 0.00 0.00 0.00 0.86
165 166 3.368013 CGTCTGGGCCGCATTTCTATATA 60.368 47.826 0.00 0.00 0.00 0.86
166 167 4.680708 CGTCTGGGCCGCATTTCTATATAT 60.681 45.833 0.00 0.00 0.00 0.86
167 168 5.186198 GTCTGGGCCGCATTTCTATATATT 58.814 41.667 0.00 0.00 0.00 1.28
168 169 5.065218 GTCTGGGCCGCATTTCTATATATTG 59.935 44.000 0.00 0.00 0.00 1.90
169 170 5.045942 TCTGGGCCGCATTTCTATATATTGA 60.046 40.000 0.00 0.00 0.00 2.57
170 171 5.565509 TGGGCCGCATTTCTATATATTGAA 58.434 37.500 5.62 5.62 0.00 2.69
171 172 5.647658 TGGGCCGCATTTCTATATATTGAAG 59.352 40.000 9.13 2.00 0.00 3.02
172 173 5.066505 GGGCCGCATTTCTATATATTGAAGG 59.933 44.000 9.13 8.46 0.00 3.46
173 174 5.648092 GGCCGCATTTCTATATATTGAAGGT 59.352 40.000 9.13 1.81 0.00 3.50
174 175 6.151144 GGCCGCATTTCTATATATTGAAGGTT 59.849 38.462 9.13 0.00 0.00 3.50
175 176 7.309194 GGCCGCATTTCTATATATTGAAGGTTT 60.309 37.037 9.13 0.00 0.00 3.27
176 177 7.538678 GCCGCATTTCTATATATTGAAGGTTTG 59.461 37.037 9.13 7.73 0.00 2.93
177 178 8.567948 CCGCATTTCTATATATTGAAGGTTTGT 58.432 33.333 9.13 0.00 0.00 2.83
178 179 9.599322 CGCATTTCTATATATTGAAGGTTTGTC 57.401 33.333 9.13 4.20 0.00 3.18
179 180 9.599322 GCATTTCTATATATTGAAGGTTTGTCG 57.401 33.333 9.13 0.00 0.00 4.35
182 183 8.657074 TTCTATATATTGAAGGTTTGTCGTGG 57.343 34.615 5.62 0.00 0.00 4.94
183 184 5.751243 ATATATTGAAGGTTTGTCGTGGC 57.249 39.130 0.00 0.00 0.00 5.01
184 185 1.981256 ATTGAAGGTTTGTCGTGGCT 58.019 45.000 0.00 0.00 0.00 4.75
185 186 1.757682 TTGAAGGTTTGTCGTGGCTT 58.242 45.000 0.00 0.00 0.00 4.35
186 187 2.623878 TGAAGGTTTGTCGTGGCTTA 57.376 45.000 0.00 0.00 0.00 3.09
187 188 2.215196 TGAAGGTTTGTCGTGGCTTAC 58.785 47.619 0.00 0.00 0.00 2.34
188 189 2.215196 GAAGGTTTGTCGTGGCTTACA 58.785 47.619 0.00 0.00 0.00 2.41
189 190 2.335316 AGGTTTGTCGTGGCTTACAA 57.665 45.000 0.00 0.00 33.92 2.41
190 191 2.218603 AGGTTTGTCGTGGCTTACAAG 58.781 47.619 0.00 0.00 36.96 3.16
191 192 1.265905 GGTTTGTCGTGGCTTACAAGG 59.734 52.381 0.00 0.00 36.96 3.61
192 193 2.215196 GTTTGTCGTGGCTTACAAGGA 58.785 47.619 0.00 0.00 36.96 3.36
193 194 2.614983 GTTTGTCGTGGCTTACAAGGAA 59.385 45.455 0.00 0.00 36.96 3.36
194 195 2.163818 TGTCGTGGCTTACAAGGAAG 57.836 50.000 0.00 0.00 0.00 3.46
195 196 1.689813 TGTCGTGGCTTACAAGGAAGA 59.310 47.619 0.00 0.00 0.00 2.87
196 197 2.301870 TGTCGTGGCTTACAAGGAAGAT 59.698 45.455 0.00 0.00 0.00 2.40
197 198 2.673368 GTCGTGGCTTACAAGGAAGATG 59.327 50.000 0.00 0.00 0.00 2.90
198 199 2.565391 TCGTGGCTTACAAGGAAGATGA 59.435 45.455 0.00 0.00 0.00 2.92
199 200 2.932614 CGTGGCTTACAAGGAAGATGAG 59.067 50.000 0.00 0.00 0.00 2.90
200 201 3.368427 CGTGGCTTACAAGGAAGATGAGA 60.368 47.826 0.00 0.00 0.00 3.27
201 202 4.681781 CGTGGCTTACAAGGAAGATGAGAT 60.682 45.833 0.00 0.00 0.00 2.75
202 203 4.813697 GTGGCTTACAAGGAAGATGAGATC 59.186 45.833 0.00 0.00 0.00 2.75
203 204 4.054671 GGCTTACAAGGAAGATGAGATCG 58.945 47.826 0.00 0.00 0.00 3.69
204 205 4.442192 GGCTTACAAGGAAGATGAGATCGT 60.442 45.833 0.00 0.00 0.00 3.73
205 206 4.742659 GCTTACAAGGAAGATGAGATCGTC 59.257 45.833 0.00 0.00 37.11 4.20
212 213 3.976169 GAAGATGAGATCGTCCAAGAGG 58.024 50.000 0.00 0.00 32.61 3.69
213 214 3.304911 AGATGAGATCGTCCAAGAGGA 57.695 47.619 0.00 0.00 43.21 3.71
214 215 3.221771 AGATGAGATCGTCCAAGAGGAG 58.778 50.000 0.00 0.00 46.92 3.69
215 216 2.808906 TGAGATCGTCCAAGAGGAGA 57.191 50.000 0.00 0.00 46.92 3.71
216 217 2.649190 TGAGATCGTCCAAGAGGAGAG 58.351 52.381 0.00 0.00 46.92 3.20
217 218 2.239907 TGAGATCGTCCAAGAGGAGAGA 59.760 50.000 0.00 0.00 46.92 3.10
218 219 3.117701 TGAGATCGTCCAAGAGGAGAGAT 60.118 47.826 0.00 0.00 46.92 2.75
219 220 3.486383 AGATCGTCCAAGAGGAGAGATC 58.514 50.000 16.08 16.08 46.92 2.75
220 221 1.669604 TCGTCCAAGAGGAGAGATCG 58.330 55.000 0.00 0.00 46.92 3.69
221 222 1.209747 TCGTCCAAGAGGAGAGATCGA 59.790 52.381 0.00 0.00 46.92 3.59
222 223 2.158740 TCGTCCAAGAGGAGAGATCGAT 60.159 50.000 0.00 0.00 46.92 3.59
223 224 2.225491 CGTCCAAGAGGAGAGATCGATC 59.775 54.545 17.91 17.91 46.92 3.69
224 225 3.486383 GTCCAAGAGGAGAGATCGATCT 58.514 50.000 27.63 27.63 46.92 2.75
245 246 8.873215 GATCTCATCGTTTACAGGAGAAATAA 57.127 34.615 0.00 0.00 38.05 1.40
246 247 9.482627 GATCTCATCGTTTACAGGAGAAATAAT 57.517 33.333 0.00 0.00 38.05 1.28
248 249 9.967346 TCTCATCGTTTACAGGAGAAATAATAG 57.033 33.333 0.00 0.00 32.10 1.73
249 250 9.967346 CTCATCGTTTACAGGAGAAATAATAGA 57.033 33.333 0.00 0.00 0.00 1.98
257 258 7.996758 ACAGGAGAAATAATAGAAGAAGGGA 57.003 36.000 0.00 0.00 0.00 4.20
258 259 8.574309 ACAGGAGAAATAATAGAAGAAGGGAT 57.426 34.615 0.00 0.00 0.00 3.85
259 260 9.676129 ACAGGAGAAATAATAGAAGAAGGGATA 57.324 33.333 0.00 0.00 0.00 2.59
272 273 8.380742 AGAAGAAGGGATAGAAACAGATTACA 57.619 34.615 0.00 0.00 0.00 2.41
273 274 8.826765 AGAAGAAGGGATAGAAACAGATTACAA 58.173 33.333 0.00 0.00 0.00 2.41
274 275 9.620259 GAAGAAGGGATAGAAACAGATTACAAT 57.380 33.333 0.00 0.00 0.00 2.71
275 276 9.981460 AAGAAGGGATAGAAACAGATTACAATT 57.019 29.630 0.00 0.00 0.00 2.32
276 277 9.620259 AGAAGGGATAGAAACAGATTACAATTC 57.380 33.333 0.00 0.00 0.00 2.17
277 278 9.396022 GAAGGGATAGAAACAGATTACAATTCA 57.604 33.333 0.00 0.00 0.00 2.57
278 279 9.753674 AAGGGATAGAAACAGATTACAATTCAA 57.246 29.630 0.00 0.00 0.00 2.69
279 280 9.753674 AGGGATAGAAACAGATTACAATTCAAA 57.246 29.630 0.00 0.00 0.00 2.69
305 306 9.607333 ATGAGAATCTTATCCCTATACAACAGA 57.393 33.333 0.00 0.00 34.92 3.41
306 307 9.607333 TGAGAATCTTATCCCTATACAACAGAT 57.393 33.333 0.00 0.00 34.92 2.90
315 316 7.973048 TCCCTATACAACAGATTCTAACAGT 57.027 36.000 0.00 0.00 0.00 3.55
316 317 8.008513 TCCCTATACAACAGATTCTAACAGTC 57.991 38.462 0.00 0.00 0.00 3.51
317 318 7.069578 TCCCTATACAACAGATTCTAACAGTCC 59.930 40.741 0.00 0.00 0.00 3.85
318 319 7.147724 CCCTATACAACAGATTCTAACAGTCCA 60.148 40.741 0.00 0.00 0.00 4.02
319 320 7.923344 CCTATACAACAGATTCTAACAGTCCAG 59.077 40.741 0.00 0.00 0.00 3.86
320 321 5.808366 ACAACAGATTCTAACAGTCCAGA 57.192 39.130 0.00 0.00 0.00 3.86
321 322 5.788450 ACAACAGATTCTAACAGTCCAGAG 58.212 41.667 0.00 0.00 0.00 3.35
322 323 5.174395 CAACAGATTCTAACAGTCCAGAGG 58.826 45.833 0.00 0.00 0.00 3.69
323 324 4.421131 ACAGATTCTAACAGTCCAGAGGT 58.579 43.478 0.00 0.00 0.00 3.85
324 325 5.580998 ACAGATTCTAACAGTCCAGAGGTA 58.419 41.667 0.00 0.00 0.00 3.08
325 326 6.198639 ACAGATTCTAACAGTCCAGAGGTAT 58.801 40.000 0.00 0.00 0.00 2.73
326 327 7.355101 ACAGATTCTAACAGTCCAGAGGTATA 58.645 38.462 0.00 0.00 0.00 1.47
327 328 7.504238 ACAGATTCTAACAGTCCAGAGGTATAG 59.496 40.741 0.00 0.00 0.00 1.31
328 329 7.721842 CAGATTCTAACAGTCCAGAGGTATAGA 59.278 40.741 0.00 0.00 0.00 1.98
329 330 8.282982 AGATTCTAACAGTCCAGAGGTATAGAA 58.717 37.037 0.00 0.00 33.97 2.10
330 331 7.642082 TTCTAACAGTCCAGAGGTATAGAAC 57.358 40.000 0.00 0.00 0.00 3.01
331 332 6.728411 TCTAACAGTCCAGAGGTATAGAACA 58.272 40.000 0.00 0.00 0.00 3.18
332 333 5.923733 AACAGTCCAGAGGTATAGAACAG 57.076 43.478 0.00 0.00 0.00 3.16
333 334 3.702045 ACAGTCCAGAGGTATAGAACAGC 59.298 47.826 0.00 0.00 0.00 4.40
334 335 3.701542 CAGTCCAGAGGTATAGAACAGCA 59.298 47.826 0.00 0.00 0.00 4.41
335 336 4.343526 CAGTCCAGAGGTATAGAACAGCAT 59.656 45.833 0.00 0.00 0.00 3.79
336 337 5.536538 CAGTCCAGAGGTATAGAACAGCATA 59.463 44.000 0.00 0.00 0.00 3.14
337 338 5.536916 AGTCCAGAGGTATAGAACAGCATAC 59.463 44.000 0.00 0.00 0.00 2.39
338 339 4.833380 TCCAGAGGTATAGAACAGCATACC 59.167 45.833 3.10 3.10 44.76 2.73
341 342 3.380479 GGTATAGAACAGCATACCGCA 57.620 47.619 0.00 0.00 46.13 5.69
342 343 3.318017 GGTATAGAACAGCATACCGCAG 58.682 50.000 0.00 0.00 46.13 5.18
360 361 3.813724 GAGCTGGGGTGGGGGATG 61.814 72.222 0.00 0.00 0.00 3.51
361 362 4.701437 AGCTGGGGTGGGGGATGT 62.701 66.667 0.00 0.00 0.00 3.06
362 363 4.447342 GCTGGGGTGGGGGATGTG 62.447 72.222 0.00 0.00 0.00 3.21
363 364 2.941025 CTGGGGTGGGGGATGTGT 60.941 66.667 0.00 0.00 0.00 3.72
364 365 1.618143 CTGGGGTGGGGGATGTGTA 60.618 63.158 0.00 0.00 0.00 2.90
365 366 1.618143 TGGGGTGGGGGATGTGTAG 60.618 63.158 0.00 0.00 0.00 2.74
366 367 1.307517 GGGGTGGGGGATGTGTAGA 60.308 63.158 0.00 0.00 0.00 2.59
367 368 1.345715 GGGGTGGGGGATGTGTAGAG 61.346 65.000 0.00 0.00 0.00 2.43
368 369 1.345715 GGGTGGGGGATGTGTAGAGG 61.346 65.000 0.00 0.00 0.00 3.69
369 370 0.326238 GGTGGGGGATGTGTAGAGGA 60.326 60.000 0.00 0.00 0.00 3.71
370 371 1.123928 GTGGGGGATGTGTAGAGGAG 58.876 60.000 0.00 0.00 0.00 3.69
371 372 1.015609 TGGGGGATGTGTAGAGGAGA 58.984 55.000 0.00 0.00 0.00 3.71
372 373 1.364678 TGGGGGATGTGTAGAGGAGAA 59.635 52.381 0.00 0.00 0.00 2.87
373 374 2.043227 GGGGGATGTGTAGAGGAGAAG 58.957 57.143 0.00 0.00 0.00 2.85
374 375 2.043227 GGGGATGTGTAGAGGAGAAGG 58.957 57.143 0.00 0.00 0.00 3.46
375 376 2.043227 GGGATGTGTAGAGGAGAAGGG 58.957 57.143 0.00 0.00 0.00 3.95
376 377 2.359355 GGGATGTGTAGAGGAGAAGGGA 60.359 54.545 0.00 0.00 0.00 4.20
377 378 3.582164 GGATGTGTAGAGGAGAAGGGAT 58.418 50.000 0.00 0.00 0.00 3.85
378 379 3.323403 GGATGTGTAGAGGAGAAGGGATG 59.677 52.174 0.00 0.00 0.00 3.51
379 380 2.752030 TGTGTAGAGGAGAAGGGATGG 58.248 52.381 0.00 0.00 0.00 3.51
380 381 2.314852 TGTGTAGAGGAGAAGGGATGGA 59.685 50.000 0.00 0.00 0.00 3.41
381 382 2.962421 GTGTAGAGGAGAAGGGATGGAG 59.038 54.545 0.00 0.00 0.00 3.86
382 383 2.091055 TGTAGAGGAGAAGGGATGGAGG 60.091 54.545 0.00 0.00 0.00 4.30
383 384 1.324014 AGAGGAGAAGGGATGGAGGA 58.676 55.000 0.00 0.00 0.00 3.71
384 385 1.220236 AGAGGAGAAGGGATGGAGGAG 59.780 57.143 0.00 0.00 0.00 3.69
385 386 0.399806 AGGAGAAGGGATGGAGGAGC 60.400 60.000 0.00 0.00 0.00 4.70
386 387 0.692419 GGAGAAGGGATGGAGGAGCA 60.692 60.000 0.00 0.00 0.00 4.26
387 388 1.433121 GAGAAGGGATGGAGGAGCAT 58.567 55.000 0.00 0.00 0.00 3.79
388 389 1.072015 GAGAAGGGATGGAGGAGCATG 59.928 57.143 0.00 0.00 0.00 4.06
389 390 1.135094 GAAGGGATGGAGGAGCATGA 58.865 55.000 0.00 0.00 0.00 3.07
390 391 1.072015 GAAGGGATGGAGGAGCATGAG 59.928 57.143 0.00 0.00 0.00 2.90
391 392 0.030297 AGGGATGGAGGAGCATGAGT 60.030 55.000 0.00 0.00 0.00 3.41
392 393 0.108207 GGGATGGAGGAGCATGAGTG 59.892 60.000 0.00 0.00 0.00 3.51
401 402 4.950479 GCATGAGTGCCTACTGCT 57.050 55.556 0.00 0.00 45.76 4.24
403 404 1.863267 GCATGAGTGCCTACTGCTAG 58.137 55.000 0.00 0.00 45.76 3.42
404 405 1.137872 GCATGAGTGCCTACTGCTAGT 59.862 52.381 0.00 0.00 45.76 2.57
405 406 2.801342 GCATGAGTGCCTACTGCTAGTC 60.801 54.545 0.00 0.00 45.76 2.59
406 407 1.475403 TGAGTGCCTACTGCTAGTCC 58.525 55.000 0.00 0.00 42.00 3.85
407 408 1.272480 TGAGTGCCTACTGCTAGTCCA 60.272 52.381 0.00 0.00 42.00 4.02
408 409 1.135333 GAGTGCCTACTGCTAGTCCAC 59.865 57.143 0.00 0.00 42.00 4.02
409 410 0.179134 GTGCCTACTGCTAGTCCACG 60.179 60.000 0.00 0.00 42.00 4.94
410 411 1.320344 TGCCTACTGCTAGTCCACGG 61.320 60.000 0.00 0.00 42.00 4.94
411 412 1.321074 GCCTACTGCTAGTCCACGGT 61.321 60.000 0.00 0.00 36.87 4.83
412 413 0.456221 CCTACTGCTAGTCCACGGTG 59.544 60.000 0.00 0.00 0.00 4.94
413 414 0.456221 CTACTGCTAGTCCACGGTGG 59.544 60.000 21.27 21.27 39.43 4.61
414 415 0.251474 TACTGCTAGTCCACGGTGGT 60.251 55.000 25.53 11.08 39.03 4.16
415 416 1.079819 CTGCTAGTCCACGGTGGTG 60.080 63.158 25.53 15.16 43.99 4.17
445 446 4.796231 CCGTCGGGCGTGGAGAAG 62.796 72.222 2.34 0.00 39.32 2.85
446 447 3.744719 CGTCGGGCGTGGAGAAGA 61.745 66.667 0.00 0.00 35.54 2.87
447 448 2.182030 GTCGGGCGTGGAGAAGAG 59.818 66.667 0.00 0.00 0.00 2.85
448 449 3.760035 TCGGGCGTGGAGAAGAGC 61.760 66.667 0.00 0.00 0.00 4.09
449 450 3.764466 CGGGCGTGGAGAAGAGCT 61.764 66.667 0.00 0.00 0.00 4.09
450 451 2.185608 GGGCGTGGAGAAGAGCTC 59.814 66.667 5.27 5.27 43.17 4.09
457 458 4.511636 GAGAAGAGCTCCTTGGCG 57.488 61.111 10.93 0.00 37.69 5.69
458 459 1.153469 GAGAAGAGCTCCTTGGCGG 60.153 63.158 10.93 0.00 37.69 6.13
459 460 2.821810 GAAGAGCTCCTTGGCGGC 60.822 66.667 10.93 0.00 34.68 6.53
460 461 3.612247 GAAGAGCTCCTTGGCGGCA 62.612 63.158 7.97 7.97 34.68 5.69
461 462 3.909086 AAGAGCTCCTTGGCGGCAC 62.909 63.158 12.92 0.00 37.29 5.01
475 476 4.785453 GCACGGAGGGCCTTGAGG 62.785 72.222 7.89 0.00 35.54 3.86
476 477 3.322466 CACGGAGGGCCTTGAGGT 61.322 66.667 7.89 0.08 35.54 3.85
477 478 3.322466 ACGGAGGGCCTTGAGGTG 61.322 66.667 7.89 0.00 37.57 4.00
478 479 4.785453 CGGAGGGCCTTGAGGTGC 62.785 72.222 7.89 0.00 37.57 5.01
479 480 3.334054 GGAGGGCCTTGAGGTGCT 61.334 66.667 7.89 0.00 37.57 4.40
480 481 2.045536 GAGGGCCTTGAGGTGCTG 60.046 66.667 7.89 0.00 37.57 4.41
481 482 3.635268 GAGGGCCTTGAGGTGCTGG 62.635 68.421 7.89 0.00 37.57 4.85
482 483 3.650950 GGGCCTTGAGGTGCTGGA 61.651 66.667 0.84 0.00 37.57 3.86
483 484 2.045536 GGCCTTGAGGTGCTGGAG 60.046 66.667 0.00 0.00 37.57 3.86
484 485 2.045536 GCCTTGAGGTGCTGGAGG 60.046 66.667 0.00 0.00 37.57 4.30
485 486 2.045536 CCTTGAGGTGCTGGAGGC 60.046 66.667 0.00 0.00 42.22 4.70
486 487 2.435586 CTTGAGGTGCTGGAGGCG 60.436 66.667 0.00 0.00 45.43 5.52
487 488 3.965539 CTTGAGGTGCTGGAGGCGG 62.966 68.421 0.00 0.00 45.43 6.13
506 507 3.112075 CGGCGGCGTATGGCATAG 61.112 66.667 24.74 3.70 46.16 2.23
507 508 2.742372 GGCGGCGTATGGCATAGG 60.742 66.667 20.01 20.01 46.16 2.57
508 509 2.742372 GCGGCGTATGGCATAGGG 60.742 66.667 24.01 13.50 46.16 3.53
509 510 2.741092 CGGCGTATGGCATAGGGT 59.259 61.111 24.01 0.00 46.16 4.34
510 511 1.667830 CGGCGTATGGCATAGGGTG 60.668 63.158 24.01 9.66 46.16 4.61
520 521 3.212377 CATAGGGTGCAATGGGCTT 57.788 52.632 0.00 0.00 45.15 4.35
521 522 1.488390 CATAGGGTGCAATGGGCTTT 58.512 50.000 0.00 0.00 45.15 3.51
522 523 1.832998 CATAGGGTGCAATGGGCTTTT 59.167 47.619 0.00 0.00 45.15 2.27
523 524 2.022718 TAGGGTGCAATGGGCTTTTT 57.977 45.000 0.00 0.00 45.15 1.94
524 525 0.686789 AGGGTGCAATGGGCTTTTTC 59.313 50.000 0.00 0.00 45.15 2.29
525 526 0.686789 GGGTGCAATGGGCTTTTTCT 59.313 50.000 0.00 0.00 45.15 2.52
526 527 1.608801 GGGTGCAATGGGCTTTTTCTG 60.609 52.381 0.00 0.00 45.15 3.02
527 528 1.608801 GGTGCAATGGGCTTTTTCTGG 60.609 52.381 0.00 0.00 45.15 3.86
528 529 0.035176 TGCAATGGGCTTTTTCTGGC 59.965 50.000 0.00 0.00 45.15 4.85
533 534 3.278157 GGCTTTTTCTGGCCCGAG 58.722 61.111 0.00 0.00 42.30 4.63
534 535 1.303317 GGCTTTTTCTGGCCCGAGA 60.303 57.895 0.00 0.00 42.30 4.04
535 536 0.893727 GGCTTTTTCTGGCCCGAGAA 60.894 55.000 0.00 0.00 42.30 2.87
536 537 0.523519 GCTTTTTCTGGCCCGAGAAG 59.476 55.000 14.20 14.20 33.50 2.85
537 538 1.882352 GCTTTTTCTGGCCCGAGAAGA 60.882 52.381 19.61 8.67 33.50 2.87
538 539 2.716217 CTTTTTCTGGCCCGAGAAGAT 58.284 47.619 13.62 0.00 33.50 2.40
539 540 2.879103 TTTTCTGGCCCGAGAAGATT 57.121 45.000 0.00 0.00 33.50 2.40
540 541 2.879103 TTTCTGGCCCGAGAAGATTT 57.121 45.000 0.00 0.00 33.50 2.17
541 542 2.403252 TTCTGGCCCGAGAAGATTTC 57.597 50.000 0.00 0.00 0.00 2.17
542 543 1.275666 TCTGGCCCGAGAAGATTTCA 58.724 50.000 0.00 0.00 0.00 2.69
543 544 1.208052 TCTGGCCCGAGAAGATTTCAG 59.792 52.381 0.00 0.00 0.00 3.02
544 545 1.208052 CTGGCCCGAGAAGATTTCAGA 59.792 52.381 0.00 0.00 0.00 3.27
545 546 1.208052 TGGCCCGAGAAGATTTCAGAG 59.792 52.381 0.00 0.00 0.00 3.35
546 547 1.208293 GGCCCGAGAAGATTTCAGAGT 59.792 52.381 0.00 0.00 0.00 3.24
547 548 2.275318 GCCCGAGAAGATTTCAGAGTG 58.725 52.381 0.00 0.00 0.00 3.51
548 549 2.354203 GCCCGAGAAGATTTCAGAGTGT 60.354 50.000 0.00 0.00 0.00 3.55
549 550 3.119101 GCCCGAGAAGATTTCAGAGTGTA 60.119 47.826 0.00 0.00 0.00 2.90
550 551 4.677584 CCCGAGAAGATTTCAGAGTGTAG 58.322 47.826 0.00 0.00 0.00 2.74
551 552 4.440802 CCCGAGAAGATTTCAGAGTGTAGG 60.441 50.000 0.00 0.00 0.00 3.18
552 553 4.109050 CGAGAAGATTTCAGAGTGTAGGC 58.891 47.826 0.00 0.00 0.00 3.93
553 554 4.380973 CGAGAAGATTTCAGAGTGTAGGCA 60.381 45.833 0.00 0.00 0.00 4.75
554 555 5.083533 AGAAGATTTCAGAGTGTAGGCAG 57.916 43.478 0.00 0.00 0.00 4.85
555 556 4.530161 AGAAGATTTCAGAGTGTAGGCAGT 59.470 41.667 0.00 0.00 0.00 4.40
556 557 4.199432 AGATTTCAGAGTGTAGGCAGTG 57.801 45.455 0.00 0.00 0.00 3.66
557 558 3.580458 AGATTTCAGAGTGTAGGCAGTGT 59.420 43.478 0.00 0.00 0.00 3.55
558 559 3.386768 TTTCAGAGTGTAGGCAGTGTC 57.613 47.619 0.00 0.00 0.00 3.67
559 560 2.294449 TCAGAGTGTAGGCAGTGTCT 57.706 50.000 1.28 1.28 0.00 3.41
560 561 2.598565 TCAGAGTGTAGGCAGTGTCTT 58.401 47.619 0.72 0.00 0.00 3.01
561 562 2.558795 TCAGAGTGTAGGCAGTGTCTTC 59.441 50.000 0.72 0.00 0.00 2.87
562 563 2.560542 CAGAGTGTAGGCAGTGTCTTCT 59.439 50.000 0.72 0.00 0.00 2.85
563 564 2.823154 AGAGTGTAGGCAGTGTCTTCTC 59.177 50.000 0.72 9.13 0.00 2.87
564 565 2.558795 GAGTGTAGGCAGTGTCTTCTCA 59.441 50.000 0.72 0.00 0.00 3.27
565 566 2.297597 AGTGTAGGCAGTGTCTTCTCAC 59.702 50.000 0.72 10.53 38.46 3.51
567 568 2.558795 TGTAGGCAGTGTCTTCTCACTC 59.441 50.000 0.72 0.00 45.37 3.51
568 569 0.972883 AGGCAGTGTCTTCTCACTCC 59.027 55.000 0.00 0.00 45.37 3.85
569 570 0.681733 GGCAGTGTCTTCTCACTCCA 59.318 55.000 0.00 0.00 45.37 3.86
570 571 1.337635 GGCAGTGTCTTCTCACTCCAG 60.338 57.143 0.00 0.00 45.37 3.86
571 572 1.342819 GCAGTGTCTTCTCACTCCAGT 59.657 52.381 0.00 0.00 45.37 4.00
572 573 2.865670 GCAGTGTCTTCTCACTCCAGTG 60.866 54.545 0.00 0.00 45.37 3.66
573 574 1.342819 AGTGTCTTCTCACTCCAGTGC 59.657 52.381 1.49 0.00 44.07 4.40
574 575 1.342819 GTGTCTTCTCACTCCAGTGCT 59.657 52.381 1.49 0.00 45.25 4.40
575 576 1.615883 TGTCTTCTCACTCCAGTGCTC 59.384 52.381 1.49 0.00 45.25 4.26
576 577 1.067213 GTCTTCTCACTCCAGTGCTCC 60.067 57.143 1.49 0.00 45.25 4.70
577 578 0.972134 CTTCTCACTCCAGTGCTCCA 59.028 55.000 1.49 0.00 45.25 3.86
578 579 0.972134 TTCTCACTCCAGTGCTCCAG 59.028 55.000 1.49 0.00 45.25 3.86
579 580 0.902048 TCTCACTCCAGTGCTCCAGG 60.902 60.000 1.49 0.00 45.25 4.45
580 581 2.046507 CACTCCAGTGCTCCAGGC 60.047 66.667 0.00 0.00 39.39 4.85
581 582 3.325753 ACTCCAGTGCTCCAGGCC 61.326 66.667 0.00 0.00 40.92 5.19
582 583 4.106925 CTCCAGTGCTCCAGGCCC 62.107 72.222 0.00 0.00 40.92 5.80
583 584 4.980592 TCCAGTGCTCCAGGCCCA 62.981 66.667 0.00 0.00 40.92 5.36
584 585 4.421515 CCAGTGCTCCAGGCCCAG 62.422 72.222 0.00 0.00 40.92 4.45
585 586 3.324930 CAGTGCTCCAGGCCCAGA 61.325 66.667 0.00 0.00 40.92 3.86
586 587 3.325753 AGTGCTCCAGGCCCAGAC 61.326 66.667 0.00 0.00 40.92 3.51
587 588 3.640407 GTGCTCCAGGCCCAGACA 61.640 66.667 0.00 0.00 40.92 3.41
588 589 2.853542 TGCTCCAGGCCCAGACAA 60.854 61.111 0.00 0.00 40.92 3.18
589 590 2.233566 TGCTCCAGGCCCAGACAAT 61.234 57.895 0.00 0.00 40.92 2.71
590 591 1.452833 GCTCCAGGCCCAGACAATC 60.453 63.158 0.00 0.00 34.27 2.67
591 592 1.153289 CTCCAGGCCCAGACAATCG 60.153 63.158 0.00 0.00 0.00 3.34
592 593 1.612146 TCCAGGCCCAGACAATCGA 60.612 57.895 0.00 0.00 0.00 3.59
593 594 1.198094 TCCAGGCCCAGACAATCGAA 61.198 55.000 0.00 0.00 0.00 3.71
594 595 1.026718 CCAGGCCCAGACAATCGAAC 61.027 60.000 0.00 0.00 0.00 3.95
595 596 1.079127 AGGCCCAGACAATCGAACG 60.079 57.895 0.00 0.00 0.00 3.95
596 597 2.750888 GGCCCAGACAATCGAACGC 61.751 63.158 0.00 0.00 0.00 4.84
597 598 2.032634 GCCCAGACAATCGAACGCA 61.033 57.895 0.00 0.00 0.00 5.24
598 599 1.573829 GCCCAGACAATCGAACGCAA 61.574 55.000 0.00 0.00 0.00 4.85
600 601 0.179215 CCAGACAATCGAACGCAAGC 60.179 55.000 0.00 0.00 45.62 4.01
601 602 0.179215 CAGACAATCGAACGCAAGCC 60.179 55.000 0.00 0.00 45.62 4.35
602 603 0.320771 AGACAATCGAACGCAAGCCT 60.321 50.000 0.00 0.00 45.62 4.58
603 604 0.095417 GACAATCGAACGCAAGCCTC 59.905 55.000 0.00 0.00 45.62 4.70
604 605 1.298859 ACAATCGAACGCAAGCCTCC 61.299 55.000 0.00 0.00 45.62 4.30
605 606 1.021390 CAATCGAACGCAAGCCTCCT 61.021 55.000 0.00 0.00 45.62 3.69
606 607 1.021390 AATCGAACGCAAGCCTCCTG 61.021 55.000 0.00 0.00 45.62 3.86
607 608 2.859273 ATCGAACGCAAGCCTCCTGG 62.859 60.000 0.00 0.00 45.62 4.45
608 609 2.032681 GAACGCAAGCCTCCTGGT 59.967 61.111 0.00 0.00 45.62 4.00
609 610 1.600916 GAACGCAAGCCTCCTGGTT 60.601 57.895 0.00 0.00 45.62 3.67
613 614 2.846532 CAAGCCTCCTGGTTGGGT 59.153 61.111 7.22 7.22 46.34 4.51
614 615 1.303643 CAAGCCTCCTGGTTGGGTC 60.304 63.158 12.00 3.04 46.34 4.46
615 616 2.895424 AAGCCTCCTGGTTGGGTCG 61.895 63.158 12.00 0.00 36.20 4.79
616 617 4.410400 GCCTCCTGGTTGGGTCGG 62.410 72.222 9.70 0.00 36.20 4.79
617 618 3.717294 CCTCCTGGTTGGGTCGGG 61.717 72.222 0.00 0.00 36.20 5.14
618 619 3.717294 CTCCTGGTTGGGTCGGGG 61.717 72.222 0.00 0.00 36.20 5.73
619 620 4.585216 TCCTGGTTGGGTCGGGGT 62.585 66.667 0.00 0.00 36.20 4.95
620 621 4.344865 CCTGGTTGGGTCGGGGTG 62.345 72.222 0.00 0.00 0.00 4.61
621 622 4.344865 CTGGTTGGGTCGGGGTGG 62.345 72.222 0.00 0.00 0.00 4.61
623 624 4.653888 GGTTGGGTCGGGGTGGTG 62.654 72.222 0.00 0.00 0.00 4.17
624 625 4.653888 GTTGGGTCGGGGTGGTGG 62.654 72.222 0.00 0.00 0.00 4.61
625 626 4.902258 TTGGGTCGGGGTGGTGGA 62.902 66.667 0.00 0.00 0.00 4.02
626 627 4.902258 TGGGTCGGGGTGGTGGAA 62.902 66.667 0.00 0.00 0.00 3.53
627 628 3.572222 GGGTCGGGGTGGTGGAAA 61.572 66.667 0.00 0.00 0.00 3.13
628 629 2.281970 GGTCGGGGTGGTGGAAAC 60.282 66.667 0.00 0.00 0.00 2.78
629 630 2.667199 GTCGGGGTGGTGGAAACG 60.667 66.667 0.00 0.00 0.00 3.60
630 631 3.943691 TCGGGGTGGTGGAAACGG 61.944 66.667 0.00 0.00 0.00 4.44
631 632 3.943691 CGGGGTGGTGGAAACGGA 61.944 66.667 0.00 0.00 0.00 4.69
632 633 2.761160 GGGGTGGTGGAAACGGAT 59.239 61.111 0.00 0.00 0.00 4.18
633 634 1.677633 GGGGTGGTGGAAACGGATG 60.678 63.158 0.00 0.00 0.00 3.51
634 635 1.677633 GGGTGGTGGAAACGGATGG 60.678 63.158 0.00 0.00 0.00 3.51
635 636 1.377229 GGTGGTGGAAACGGATGGA 59.623 57.895 0.00 0.00 0.00 3.41
636 637 0.250989 GGTGGTGGAAACGGATGGAA 60.251 55.000 0.00 0.00 0.00 3.53
637 638 1.165270 GTGGTGGAAACGGATGGAAG 58.835 55.000 0.00 0.00 0.00 3.46
638 639 1.060729 TGGTGGAAACGGATGGAAGA 58.939 50.000 0.00 0.00 0.00 2.87
639 640 1.422024 TGGTGGAAACGGATGGAAGAA 59.578 47.619 0.00 0.00 0.00 2.52
640 641 2.158593 TGGTGGAAACGGATGGAAGAAA 60.159 45.455 0.00 0.00 0.00 2.52
641 642 2.228103 GGTGGAAACGGATGGAAGAAAC 59.772 50.000 0.00 0.00 0.00 2.78
642 643 3.146847 GTGGAAACGGATGGAAGAAACT 58.853 45.455 0.00 0.00 0.00 2.66
643 644 3.568430 GTGGAAACGGATGGAAGAAACTT 59.432 43.478 0.00 0.00 0.00 2.66
644 645 3.818773 TGGAAACGGATGGAAGAAACTTC 59.181 43.478 0.00 0.00 0.00 3.01
645 646 3.818773 GGAAACGGATGGAAGAAACTTCA 59.181 43.478 12.46 1.40 0.00 3.02
646 647 4.320275 GGAAACGGATGGAAGAAACTTCAC 60.320 45.833 12.46 4.20 0.00 3.18
647 648 3.485463 ACGGATGGAAGAAACTTCACA 57.515 42.857 12.46 8.72 0.00 3.58
648 649 3.815809 ACGGATGGAAGAAACTTCACAA 58.184 40.909 12.46 0.13 0.00 3.33
649 650 3.815401 ACGGATGGAAGAAACTTCACAAG 59.185 43.478 12.46 7.41 0.00 3.16
650 651 3.815401 CGGATGGAAGAAACTTCACAAGT 59.185 43.478 12.46 0.00 45.46 3.16
664 665 7.793927 ACTTCACAAGTTTTTGTTTTGGAAA 57.206 28.000 0.00 0.00 45.01 3.13
665 666 8.214721 ACTTCACAAGTTTTTGTTTTGGAAAA 57.785 26.923 0.00 0.00 45.01 2.29
666 667 8.678199 ACTTCACAAGTTTTTGTTTTGGAAAAA 58.322 25.926 0.00 0.00 45.01 1.94
687 688 6.449830 AAAATGAGGGTAGAAACTACACCT 57.550 37.500 14.18 14.18 32.66 4.00
688 689 6.449830 AAATGAGGGTAGAAACTACACCTT 57.550 37.500 14.91 4.16 32.66 3.50
689 690 7.563724 AAATGAGGGTAGAAACTACACCTTA 57.436 36.000 14.91 12.71 32.66 2.69
690 691 7.750947 AATGAGGGTAGAAACTACACCTTAT 57.249 36.000 14.91 13.81 32.66 1.73
691 692 8.849543 AATGAGGGTAGAAACTACACCTTATA 57.150 34.615 15.96 9.86 32.66 0.98
692 693 7.893124 TGAGGGTAGAAACTACACCTTATAG 57.107 40.000 14.91 0.00 32.66 1.31
693 694 7.645942 TGAGGGTAGAAACTACACCTTATAGA 58.354 38.462 14.91 2.66 32.66 1.98
694 695 8.117956 TGAGGGTAGAAACTACACCTTATAGAA 58.882 37.037 14.91 2.66 32.66 2.10
695 696 8.906238 AGGGTAGAAACTACACCTTATAGAAA 57.094 34.615 7.44 0.00 32.66 2.52
696 697 9.503369 AGGGTAGAAACTACACCTTATAGAAAT 57.497 33.333 7.44 0.00 32.66 2.17
708 709 8.812972 ACACCTTATAGAAATACTCTGTTGTCA 58.187 33.333 0.00 0.00 35.41 3.58
709 710 9.653287 CACCTTATAGAAATACTCTGTTGTCAA 57.347 33.333 0.00 0.00 35.41 3.18
713 714 9.701098 TTATAGAAATACTCTGTTGTCAAACGT 57.299 29.630 0.00 0.00 39.30 3.99
715 716 7.639162 AGAAATACTCTGTTGTCAAACGTAG 57.361 36.000 0.00 0.00 39.30 3.51
716 717 5.840940 AATACTCTGTTGTCAAACGTAGC 57.159 39.130 0.00 0.00 39.30 3.58
717 718 2.480845 ACTCTGTTGTCAAACGTAGCC 58.519 47.619 0.00 0.00 39.30 3.93
718 719 2.102588 ACTCTGTTGTCAAACGTAGCCT 59.897 45.455 0.00 0.00 39.30 4.58
719 720 3.319972 ACTCTGTTGTCAAACGTAGCCTA 59.680 43.478 0.00 0.00 39.30 3.93
720 721 4.202182 ACTCTGTTGTCAAACGTAGCCTAA 60.202 41.667 0.00 0.00 39.30 2.69
721 722 4.695396 TCTGTTGTCAAACGTAGCCTAAA 58.305 39.130 0.00 0.00 39.30 1.85
722 723 4.748102 TCTGTTGTCAAACGTAGCCTAAAG 59.252 41.667 0.00 0.00 39.30 1.85
723 724 3.810941 TGTTGTCAAACGTAGCCTAAAGG 59.189 43.478 0.00 0.00 39.30 3.11
724 725 4.060205 GTTGTCAAACGTAGCCTAAAGGA 58.940 43.478 0.00 0.00 37.39 3.36
725 726 4.339872 TGTCAAACGTAGCCTAAAGGAA 57.660 40.909 0.00 0.00 37.39 3.36
726 727 4.060205 TGTCAAACGTAGCCTAAAGGAAC 58.940 43.478 0.00 0.00 37.39 3.62
727 728 9.939466 TGTTGTCAAACGTAGCCTAAAGGAACT 62.939 40.741 0.00 0.00 39.10 3.01
728 729 4.151867 GTCAAACGTAGCCTAAAGGAACTG 59.848 45.833 0.00 0.00 40.86 3.16
729 730 3.329929 AACGTAGCCTAAAGGAACTGG 57.670 47.619 0.00 0.00 40.86 4.00
791 793 4.914312 TTGCGAAAAACACTAGGATACG 57.086 40.909 0.00 0.00 46.39 3.06
870 883 4.929808 CGGCAGTTAAGTGAGTTTATGACT 59.070 41.667 14.64 0.00 42.70 3.41
876 889 4.974645 AAGTGAGTTTATGACTGGTGGA 57.025 40.909 0.00 0.00 39.19 4.02
940 963 2.261671 CAGCTGGCGTTAGACGGT 59.738 61.111 5.57 0.00 42.82 4.83
942 965 3.488090 GCTGGCGTTAGACGGTGC 61.488 66.667 2.48 0.00 42.82 5.01
947 970 2.202570 CGTTAGACGGTGCCCTCG 60.203 66.667 0.00 0.00 38.08 4.63
976 1053 1.608025 CGGTCCTAGCAGTCAAAAGCA 60.608 52.381 0.00 0.00 0.00 3.91
1112 1271 0.034896 GTGTCGTGGAGTGATGGGTT 59.965 55.000 0.00 0.00 0.00 4.11
1115 1274 1.377202 CGTGGAGTGATGGGTTGGG 60.377 63.158 0.00 0.00 0.00 4.12
1146 1305 2.029020 GCACACTGTGGAGTACATGAGA 60.029 50.000 13.09 0.00 38.92 3.27
1225 1384 7.896383 TTGATATTTGGGGATTTCTCGAATT 57.104 32.000 0.00 0.00 0.00 2.17
1361 1521 3.537206 GACACGGGAAGGCAGCAGT 62.537 63.158 0.00 0.00 0.00 4.40
1516 1852 0.983467 TAATGTGGCACTCCAGCAGA 59.017 50.000 19.83 0.00 44.48 4.26
1583 1919 5.476599 TGTTTACTCTGCCAGCATTGTTTAT 59.523 36.000 0.00 0.00 0.00 1.40
1590 1926 3.193267 TGCCAGCATTGTTTATTCTGGTC 59.807 43.478 8.19 2.38 46.01 4.02
1772 2180 9.447279 TTTAGGATAGAAGATTCATGGGTTAGA 57.553 33.333 0.00 0.00 0.00 2.10
1802 2210 8.015658 CCAGCATTGTTTACTTAGTAGTTGTTC 58.984 37.037 0.00 0.00 35.78 3.18
1813 2298 7.723324 ACTTAGTAGTTGTTCACTTTAGAGCA 58.277 34.615 0.00 0.00 36.88 4.26
1814 2299 8.202137 ACTTAGTAGTTGTTCACTTTAGAGCAA 58.798 33.333 0.00 0.00 36.56 3.91
1815 2300 8.951787 TTAGTAGTTGTTCACTTTAGAGCAAA 57.048 30.769 0.00 0.00 39.80 3.68
1816 2301 7.247929 AGTAGTTGTTCACTTTAGAGCAAAC 57.752 36.000 0.00 0.00 39.80 2.93
1817 2302 5.500645 AGTTGTTCACTTTAGAGCAAACC 57.499 39.130 0.00 0.00 39.80 3.27
1818 2303 4.947388 AGTTGTTCACTTTAGAGCAAACCA 59.053 37.500 0.00 0.00 39.80 3.67
1819 2304 5.594317 AGTTGTTCACTTTAGAGCAAACCAT 59.406 36.000 0.00 0.00 39.80 3.55
1820 2305 6.096846 AGTTGTTCACTTTAGAGCAAACCATT 59.903 34.615 0.00 0.00 39.80 3.16
1821 2306 5.830912 TGTTCACTTTAGAGCAAACCATTG 58.169 37.500 0.00 0.00 39.65 2.82
1822 2307 5.359576 TGTTCACTTTAGAGCAAACCATTGT 59.640 36.000 0.00 0.00 38.85 2.71
1823 2308 6.127479 TGTTCACTTTAGAGCAAACCATTGTT 60.127 34.615 0.00 0.00 38.85 2.83
1824 2309 6.463995 TCACTTTAGAGCAAACCATTGTTT 57.536 33.333 0.00 0.00 45.46 2.83
1825 2310 6.872920 TCACTTTAGAGCAAACCATTGTTTT 58.127 32.000 0.00 0.00 41.92 2.43
1826 2311 7.327214 TCACTTTAGAGCAAACCATTGTTTTT 58.673 30.769 0.00 0.00 41.92 1.94
1827 2312 7.491048 TCACTTTAGAGCAAACCATTGTTTTTC 59.509 33.333 0.00 0.00 41.92 2.29
1828 2313 7.492344 CACTTTAGAGCAAACCATTGTTTTTCT 59.508 33.333 9.69 9.69 41.92 2.52
1829 2314 8.691797 ACTTTAGAGCAAACCATTGTTTTTCTA 58.308 29.630 8.32 8.32 41.92 2.10
1830 2315 9.185192 CTTTAGAGCAAACCATTGTTTTTCTAG 57.815 33.333 10.68 0.00 41.92 2.43
1831 2316 6.089249 AGAGCAAACCATTGTTTTTCTAGG 57.911 37.500 5.03 0.00 41.92 3.02
1832 2317 5.833131 AGAGCAAACCATTGTTTTTCTAGGA 59.167 36.000 5.03 0.00 41.92 2.94
1833 2318 6.494835 AGAGCAAACCATTGTTTTTCTAGGAT 59.505 34.615 5.03 0.00 41.92 3.24
1834 2319 6.458210 AGCAAACCATTGTTTTTCTAGGATG 58.542 36.000 0.00 0.00 41.92 3.51
1835 2320 6.041979 AGCAAACCATTGTTTTTCTAGGATGT 59.958 34.615 0.00 0.00 41.92 3.06
1836 2321 6.705825 GCAAACCATTGTTTTTCTAGGATGTT 59.294 34.615 0.00 0.00 41.92 2.71
1837 2322 7.226523 GCAAACCATTGTTTTTCTAGGATGTTT 59.773 33.333 0.00 0.00 41.92 2.83
1838 2323 9.757227 CAAACCATTGTTTTTCTAGGATGTTTA 57.243 29.630 0.00 0.00 41.92 2.01
1839 2324 9.758651 AAACCATTGTTTTTCTAGGATGTTTAC 57.241 29.630 0.00 0.00 41.92 2.01
1840 2325 8.706322 ACCATTGTTTTTCTAGGATGTTTACT 57.294 30.769 0.00 0.00 0.00 2.24
1841 2326 9.143155 ACCATTGTTTTTCTAGGATGTTTACTT 57.857 29.630 0.00 0.00 0.00 2.24
1842 2327 9.981114 CCATTGTTTTTCTAGGATGTTTACTTT 57.019 29.630 0.00 0.00 0.00 2.66
1850 2335 9.667107 TTTCTAGGATGTTTACTTTAGGACATG 57.333 33.333 0.00 0.00 33.21 3.21
1851 2336 8.375493 TCTAGGATGTTTACTTTAGGACATGT 57.625 34.615 0.00 0.00 33.21 3.21
1852 2337 8.822805 TCTAGGATGTTTACTTTAGGACATGTT 58.177 33.333 0.00 0.00 33.21 2.71
1853 2338 9.449719 CTAGGATGTTTACTTTAGGACATGTTT 57.550 33.333 0.00 0.00 33.21 2.83
1855 2340 9.802039 AGGATGTTTACTTTAGGACATGTTTAA 57.198 29.630 0.00 0.00 33.21 1.52
1984 2478 5.319043 TCAGGAAGGTAAAAACTGTGGAT 57.681 39.130 0.00 0.00 0.00 3.41
1986 2480 5.534654 TCAGGAAGGTAAAAACTGTGGATTG 59.465 40.000 0.00 0.00 0.00 2.67
2221 2715 4.289672 AGAGGGCAGTGATAGAAAGGAAAA 59.710 41.667 0.00 0.00 0.00 2.29
2243 2737 1.199624 GCTGAAACAACCAAGTTGCG 58.800 50.000 7.36 0.00 46.20 4.85
2322 2816 4.841422 ACATGAAGTTGAAGCTAGCTGAT 58.159 39.130 20.16 2.53 0.00 2.90
2508 3021 9.801873 GTTTGGCATTTGTTGTAATGATAGTAT 57.198 29.630 0.00 0.00 37.65 2.12
2546 3059 9.696572 TTAACTATGAGTACTCCTGAACTATGT 57.303 33.333 20.11 3.81 0.00 2.29
2585 3098 8.621532 AGTAAGATGTTTGCATTTGAACTAGA 57.378 30.769 0.00 0.00 35.07 2.43
2662 3175 4.156556 TGGATTTGAACTAGTGCTGAATGC 59.843 41.667 1.64 8.42 43.25 3.56
2754 3338 9.725019 AGTATGTTTCTGTTCAACTGATGATTA 57.275 29.630 0.00 0.00 38.03 1.75
2775 3360 3.695830 TGAGTTAAGTAGGGCAAGTGG 57.304 47.619 0.00 0.00 0.00 4.00
2834 3469 6.665695 TCAAGTAGGACAAGTTAGGGTTTTT 58.334 36.000 0.00 0.00 0.00 1.94
2836 3471 5.382616 AGTAGGACAAGTTAGGGTTTTTGG 58.617 41.667 0.00 0.00 0.00 3.28
2837 3472 2.963101 AGGACAAGTTAGGGTTTTTGGC 59.037 45.455 0.00 0.00 0.00 4.52
2909 3593 3.220222 TCGATGCCGAGGCTTCAT 58.780 55.556 23.74 7.78 42.94 2.57
2923 4440 5.041191 AGGCTTCATGTAGGGTCAATTAG 57.959 43.478 1.21 0.00 0.00 1.73
2932 4449 5.954757 TGTAGGGTCAATTAGGGTTTTTGA 58.045 37.500 0.00 0.00 0.00 2.69
3281 4851 3.462982 GGGTTTTTGGCTTTTTGTCGAT 58.537 40.909 0.00 0.00 0.00 3.59
3283 4853 3.868661 GGTTTTTGGCTTTTTGTCGATGT 59.131 39.130 0.00 0.00 0.00 3.06
3331 4903 3.172824 GTTTTTGGCTTTTTGTCGACGA 58.827 40.909 11.62 6.16 0.00 4.20
3346 4918 1.790838 CGACGACGAGGCTTCAAGTAG 60.791 57.143 0.00 0.00 42.66 2.57
3359 4931 2.257207 TCAAGTAGGGTCAAGTGAGGG 58.743 52.381 0.00 0.00 0.00 4.30
3373 4945 3.872696 AGTGAGGGTTTTTGGCTTTTTG 58.127 40.909 0.00 0.00 0.00 2.44
3378 4950 3.133901 AGGGTTTTTGGCTTTTTGTCGAT 59.866 39.130 0.00 0.00 0.00 3.59
3379 4951 3.247411 GGGTTTTTGGCTTTTTGTCGATG 59.753 43.478 0.00 0.00 0.00 3.84
3380 4952 3.868661 GGTTTTTGGCTTTTTGTCGATGT 59.131 39.130 0.00 0.00 0.00 3.06
3446 5069 2.033424 CGATGTCGAGGCATCAAGTAGA 59.967 50.000 16.57 0.00 43.92 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.742880 CGATGTCCAGCACCACAGG 60.743 63.158 0.00 0.00 0.00 4.00
1 2 1.742880 CCGATGTCCAGCACCACAG 60.743 63.158 0.00 0.00 0.00 3.66
3 4 2.436646 CCCGATGTCCAGCACCAC 60.437 66.667 0.00 0.00 0.00 4.16
6 7 4.408821 TGCCCCGATGTCCAGCAC 62.409 66.667 0.00 0.00 0.00 4.40
12 13 4.899239 CTCCGCTGCCCCGATGTC 62.899 72.222 0.00 0.00 0.00 3.06
22 23 4.704833 CCACCACCACCTCCGCTG 62.705 72.222 0.00 0.00 0.00 5.18
23 24 4.954118 TCCACCACCACCTCCGCT 62.954 66.667 0.00 0.00 0.00 5.52
24 25 4.699522 GTCCACCACCACCTCCGC 62.700 72.222 0.00 0.00 0.00 5.54
25 26 2.592993 ATGTCCACCACCACCTCCG 61.593 63.158 0.00 0.00 0.00 4.63
26 27 1.002134 CATGTCCACCACCACCTCC 60.002 63.158 0.00 0.00 0.00 4.30
27 28 1.002134 CCATGTCCACCACCACCTC 60.002 63.158 0.00 0.00 0.00 3.85
28 29 3.170362 CCATGTCCACCACCACCT 58.830 61.111 0.00 0.00 0.00 4.00
29 30 2.676471 GCCATGTCCACCACCACC 60.676 66.667 0.00 0.00 0.00 4.61
30 31 1.675641 GAGCCATGTCCACCACCAC 60.676 63.158 0.00 0.00 0.00 4.16
31 32 2.128290 CTGAGCCATGTCCACCACCA 62.128 60.000 0.00 0.00 0.00 4.17
32 33 1.377725 CTGAGCCATGTCCACCACC 60.378 63.158 0.00 0.00 0.00 4.61
33 34 0.674895 GACTGAGCCATGTCCACCAC 60.675 60.000 0.00 0.00 0.00 4.16
34 35 1.679311 GACTGAGCCATGTCCACCA 59.321 57.895 0.00 0.00 0.00 4.17
35 36 1.448540 CGACTGAGCCATGTCCACC 60.449 63.158 0.00 0.00 0.00 4.61
36 37 2.103042 GCGACTGAGCCATGTCCAC 61.103 63.158 0.00 0.00 0.00 4.02
37 38 2.265739 GCGACTGAGCCATGTCCA 59.734 61.111 0.00 0.00 0.00 4.02
46 47 2.439701 TACCTCCCGGCGACTGAG 60.440 66.667 9.30 11.20 0.00 3.35
47 48 2.439701 CTACCTCCCGGCGACTGA 60.440 66.667 9.30 0.36 0.00 3.41
48 49 4.208686 GCTACCTCCCGGCGACTG 62.209 72.222 9.30 0.00 0.00 3.51
49 50 2.962142 CTAGCTACCTCCCGGCGACT 62.962 65.000 9.30 0.00 0.00 4.18
50 51 2.517875 TAGCTACCTCCCGGCGAC 60.518 66.667 9.30 0.00 0.00 5.19
51 52 2.065470 ATCTAGCTACCTCCCGGCGA 62.065 60.000 9.30 0.00 0.00 5.54
52 53 1.604023 ATCTAGCTACCTCCCGGCG 60.604 63.158 0.00 0.00 0.00 6.46
53 54 1.968310 CATCTAGCTACCTCCCGGC 59.032 63.158 0.00 0.00 0.00 6.13
54 55 1.867919 CGCATCTAGCTACCTCCCGG 61.868 65.000 0.00 0.00 42.61 5.73
55 56 0.889638 TCGCATCTAGCTACCTCCCG 60.890 60.000 0.00 0.00 42.61 5.14
56 57 1.474879 GATCGCATCTAGCTACCTCCC 59.525 57.143 0.00 0.00 42.61 4.30
57 58 2.422127 GAGATCGCATCTAGCTACCTCC 59.578 54.545 0.00 0.00 40.38 4.30
58 59 2.095213 CGAGATCGCATCTAGCTACCTC 59.905 54.545 0.00 0.00 40.38 3.85
59 60 2.080693 CGAGATCGCATCTAGCTACCT 58.919 52.381 0.00 0.00 40.38 3.08
60 61 1.807742 ACGAGATCGCATCTAGCTACC 59.192 52.381 1.39 0.00 44.43 3.18
61 62 3.484683 GAACGAGATCGCATCTAGCTAC 58.515 50.000 1.39 0.00 44.43 3.58
62 63 2.484651 GGAACGAGATCGCATCTAGCTA 59.515 50.000 1.39 0.00 44.43 3.32
63 64 1.268352 GGAACGAGATCGCATCTAGCT 59.732 52.381 1.39 0.00 44.43 3.32
64 65 1.692296 GGAACGAGATCGCATCTAGC 58.308 55.000 1.39 0.00 44.43 3.42
79 80 4.261698 GCCTCTTCCTTAGTAGATCGGAAC 60.262 50.000 0.00 0.00 32.49 3.62
80 81 3.890147 GCCTCTTCCTTAGTAGATCGGAA 59.110 47.826 0.00 0.00 34.59 4.30
81 82 3.138653 AGCCTCTTCCTTAGTAGATCGGA 59.861 47.826 0.00 0.00 0.00 4.55
82 83 3.492337 AGCCTCTTCCTTAGTAGATCGG 58.508 50.000 0.00 0.00 0.00 4.18
83 84 4.215399 CAGAGCCTCTTCCTTAGTAGATCG 59.785 50.000 0.00 0.00 0.00 3.69
84 85 5.137551 ACAGAGCCTCTTCCTTAGTAGATC 58.862 45.833 0.00 0.00 0.00 2.75
85 86 5.137412 ACAGAGCCTCTTCCTTAGTAGAT 57.863 43.478 0.00 0.00 0.00 1.98
86 87 4.594675 ACAGAGCCTCTTCCTTAGTAGA 57.405 45.455 0.00 0.00 0.00 2.59
87 88 5.068067 GGTAACAGAGCCTCTTCCTTAGTAG 59.932 48.000 0.00 0.00 0.00 2.57
88 89 4.954826 GGTAACAGAGCCTCTTCCTTAGTA 59.045 45.833 0.00 0.00 0.00 1.82
89 90 3.770388 GGTAACAGAGCCTCTTCCTTAGT 59.230 47.826 0.00 0.00 0.00 2.24
90 91 3.769844 TGGTAACAGAGCCTCTTCCTTAG 59.230 47.826 0.00 0.00 46.17 2.18
91 92 3.786553 TGGTAACAGAGCCTCTTCCTTA 58.213 45.455 0.00 0.00 46.17 2.69
92 93 2.621070 TGGTAACAGAGCCTCTTCCTT 58.379 47.619 0.00 0.00 46.17 3.36
93 94 2.327325 TGGTAACAGAGCCTCTTCCT 57.673 50.000 0.00 0.00 46.17 3.36
106 107 7.519008 CGCTTCCTCATTATCTTTCATGGTAAC 60.519 40.741 0.00 0.00 0.00 2.50
107 108 6.483307 CGCTTCCTCATTATCTTTCATGGTAA 59.517 38.462 0.00 0.00 0.00 2.85
108 109 5.991606 CGCTTCCTCATTATCTTTCATGGTA 59.008 40.000 0.00 0.00 0.00 3.25
109 110 4.818546 CGCTTCCTCATTATCTTTCATGGT 59.181 41.667 0.00 0.00 0.00 3.55
110 111 4.818546 ACGCTTCCTCATTATCTTTCATGG 59.181 41.667 0.00 0.00 0.00 3.66
111 112 5.998454 ACGCTTCCTCATTATCTTTCATG 57.002 39.130 0.00 0.00 0.00 3.07
112 113 7.055667 TCTACGCTTCCTCATTATCTTTCAT 57.944 36.000 0.00 0.00 0.00 2.57
113 114 6.465439 TCTACGCTTCCTCATTATCTTTCA 57.535 37.500 0.00 0.00 0.00 2.69
114 115 6.201234 GGTTCTACGCTTCCTCATTATCTTTC 59.799 42.308 0.00 0.00 0.00 2.62
115 116 6.049790 GGTTCTACGCTTCCTCATTATCTTT 58.950 40.000 0.00 0.00 0.00 2.52
116 117 5.364157 AGGTTCTACGCTTCCTCATTATCTT 59.636 40.000 0.00 0.00 0.00 2.40
117 118 4.896482 AGGTTCTACGCTTCCTCATTATCT 59.104 41.667 0.00 0.00 0.00 1.98
118 119 5.203060 AGGTTCTACGCTTCCTCATTATC 57.797 43.478 0.00 0.00 0.00 1.75
119 120 5.615925 AAGGTTCTACGCTTCCTCATTAT 57.384 39.130 0.00 0.00 0.00 1.28
120 121 5.416271 AAAGGTTCTACGCTTCCTCATTA 57.584 39.130 0.00 0.00 0.00 1.90
121 122 3.983044 AAGGTTCTACGCTTCCTCATT 57.017 42.857 0.00 0.00 0.00 2.57
122 123 3.676324 CGAAAGGTTCTACGCTTCCTCAT 60.676 47.826 0.00 0.00 0.00 2.90
123 124 2.352421 CGAAAGGTTCTACGCTTCCTCA 60.352 50.000 0.00 0.00 0.00 3.86
124 125 2.260481 CGAAAGGTTCTACGCTTCCTC 58.740 52.381 0.00 0.00 0.00 3.71
125 126 1.617357 ACGAAAGGTTCTACGCTTCCT 59.383 47.619 0.00 0.00 0.00 3.36
126 127 1.991264 GACGAAAGGTTCTACGCTTCC 59.009 52.381 0.00 0.00 0.00 3.46
127 128 2.662156 CAGACGAAAGGTTCTACGCTTC 59.338 50.000 0.00 0.00 0.00 3.86
128 129 2.609737 CCAGACGAAAGGTTCTACGCTT 60.610 50.000 0.00 0.00 0.00 4.68
129 130 1.067776 CCAGACGAAAGGTTCTACGCT 60.068 52.381 0.00 0.00 0.00 5.07
130 131 1.347320 CCAGACGAAAGGTTCTACGC 58.653 55.000 0.00 0.00 0.00 4.42
131 132 1.992170 CCCAGACGAAAGGTTCTACG 58.008 55.000 0.00 0.00 0.00 3.51
132 133 1.675116 GGCCCAGACGAAAGGTTCTAC 60.675 57.143 0.00 0.00 0.00 2.59
133 134 0.611714 GGCCCAGACGAAAGGTTCTA 59.388 55.000 0.00 0.00 0.00 2.10
134 135 1.375326 GGCCCAGACGAAAGGTTCT 59.625 57.895 0.00 0.00 0.00 3.01
135 136 2.033194 CGGCCCAGACGAAAGGTTC 61.033 63.158 0.00 0.00 35.20 3.62
136 137 2.032071 CGGCCCAGACGAAAGGTT 59.968 61.111 0.00 0.00 35.20 3.50
137 138 4.699522 GCGGCCCAGACGAAAGGT 62.700 66.667 0.00 0.00 35.20 3.50
138 139 3.976701 ATGCGGCCCAGACGAAAGG 62.977 63.158 0.00 0.00 35.20 3.11
139 140 1.586154 AAATGCGGCCCAGACGAAAG 61.586 55.000 0.00 0.00 35.20 2.62
140 141 1.582610 GAAATGCGGCCCAGACGAAA 61.583 55.000 0.00 0.00 35.20 3.46
141 142 2.033448 AAATGCGGCCCAGACGAA 59.967 55.556 0.00 0.00 35.20 3.85
142 143 1.609635 TAGAAATGCGGCCCAGACGA 61.610 55.000 0.00 0.00 35.20 4.20
143 144 0.532862 ATAGAAATGCGGCCCAGACG 60.533 55.000 0.00 0.00 36.98 4.18
144 145 2.543777 TATAGAAATGCGGCCCAGAC 57.456 50.000 0.00 0.00 0.00 3.51
145 146 5.045942 TCAATATATAGAAATGCGGCCCAGA 60.046 40.000 0.00 0.00 0.00 3.86
146 147 5.185454 TCAATATATAGAAATGCGGCCCAG 58.815 41.667 0.00 0.00 0.00 4.45
147 148 5.172687 TCAATATATAGAAATGCGGCCCA 57.827 39.130 0.00 0.00 0.00 5.36
148 149 5.066505 CCTTCAATATATAGAAATGCGGCCC 59.933 44.000 0.00 0.00 0.00 5.80
149 150 5.648092 ACCTTCAATATATAGAAATGCGGCC 59.352 40.000 0.00 0.00 0.00 6.13
150 151 6.743575 ACCTTCAATATATAGAAATGCGGC 57.256 37.500 0.00 0.00 0.00 6.53
151 152 8.567948 ACAAACCTTCAATATATAGAAATGCGG 58.432 33.333 0.00 0.00 0.00 5.69
152 153 9.599322 GACAAACCTTCAATATATAGAAATGCG 57.401 33.333 0.00 0.00 0.00 4.73
153 154 9.599322 CGACAAACCTTCAATATATAGAAATGC 57.401 33.333 0.00 0.00 0.00 3.56
156 157 9.104965 CCACGACAAACCTTCAATATATAGAAA 57.895 33.333 0.00 0.00 0.00 2.52
157 158 7.225931 GCCACGACAAACCTTCAATATATAGAA 59.774 37.037 0.00 0.00 0.00 2.10
158 159 6.704493 GCCACGACAAACCTTCAATATATAGA 59.296 38.462 0.00 0.00 0.00 1.98
159 160 6.706270 AGCCACGACAAACCTTCAATATATAG 59.294 38.462 0.00 0.00 0.00 1.31
160 161 6.588204 AGCCACGACAAACCTTCAATATATA 58.412 36.000 0.00 0.00 0.00 0.86
161 162 5.437060 AGCCACGACAAACCTTCAATATAT 58.563 37.500 0.00 0.00 0.00 0.86
162 163 4.839121 AGCCACGACAAACCTTCAATATA 58.161 39.130 0.00 0.00 0.00 0.86
163 164 3.686016 AGCCACGACAAACCTTCAATAT 58.314 40.909 0.00 0.00 0.00 1.28
164 165 3.134574 AGCCACGACAAACCTTCAATA 57.865 42.857 0.00 0.00 0.00 1.90
165 166 1.981256 AGCCACGACAAACCTTCAAT 58.019 45.000 0.00 0.00 0.00 2.57
166 167 1.757682 AAGCCACGACAAACCTTCAA 58.242 45.000 0.00 0.00 0.00 2.69
167 168 2.215196 GTAAGCCACGACAAACCTTCA 58.785 47.619 0.00 0.00 0.00 3.02
168 169 2.215196 TGTAAGCCACGACAAACCTTC 58.785 47.619 0.00 0.00 0.00 3.46
169 170 2.335316 TGTAAGCCACGACAAACCTT 57.665 45.000 0.00 0.00 0.00 3.50
170 171 2.218603 CTTGTAAGCCACGACAAACCT 58.781 47.619 0.00 0.00 35.24 3.50
171 172 1.265905 CCTTGTAAGCCACGACAAACC 59.734 52.381 0.00 0.00 35.24 3.27
172 173 2.215196 TCCTTGTAAGCCACGACAAAC 58.785 47.619 0.00 0.00 35.24 2.93
173 174 2.623878 TCCTTGTAAGCCACGACAAA 57.376 45.000 0.00 0.00 35.24 2.83
174 175 2.103432 TCTTCCTTGTAAGCCACGACAA 59.897 45.455 0.00 0.00 34.49 3.18
175 176 1.689813 TCTTCCTTGTAAGCCACGACA 59.310 47.619 0.00 0.00 0.00 4.35
176 177 2.450609 TCTTCCTTGTAAGCCACGAC 57.549 50.000 0.00 0.00 0.00 4.34
177 178 2.565391 TCATCTTCCTTGTAAGCCACGA 59.435 45.455 0.00 0.00 0.00 4.35
178 179 2.932614 CTCATCTTCCTTGTAAGCCACG 59.067 50.000 0.00 0.00 0.00 4.94
179 180 4.207891 TCTCATCTTCCTTGTAAGCCAC 57.792 45.455 0.00 0.00 0.00 5.01
180 181 4.442052 CGATCTCATCTTCCTTGTAAGCCA 60.442 45.833 0.00 0.00 0.00 4.75
181 182 4.054671 CGATCTCATCTTCCTTGTAAGCC 58.945 47.826 0.00 0.00 0.00 4.35
182 183 4.688021 ACGATCTCATCTTCCTTGTAAGC 58.312 43.478 0.00 0.00 0.00 3.09
183 184 5.163509 TGGACGATCTCATCTTCCTTGTAAG 60.164 44.000 9.69 0.00 45.26 2.34
184 185 4.709886 TGGACGATCTCATCTTCCTTGTAA 59.290 41.667 9.69 0.00 45.26 2.41
185 186 4.278310 TGGACGATCTCATCTTCCTTGTA 58.722 43.478 9.69 0.00 45.26 2.41
186 187 3.099905 TGGACGATCTCATCTTCCTTGT 58.900 45.455 9.69 0.00 45.26 3.16
187 188 3.808466 TGGACGATCTCATCTTCCTTG 57.192 47.619 9.69 0.00 45.26 3.61
188 189 4.026744 TCTTGGACGATCTCATCTTCCTT 58.973 43.478 9.69 0.00 45.26 3.36
189 190 3.636300 CTCTTGGACGATCTCATCTTCCT 59.364 47.826 9.69 0.00 45.26 3.36
190 191 3.243704 CCTCTTGGACGATCTCATCTTCC 60.244 52.174 2.72 2.72 45.25 3.46
191 192 3.634448 TCCTCTTGGACGATCTCATCTTC 59.366 47.826 0.00 0.00 37.46 2.87
192 193 3.636300 CTCCTCTTGGACGATCTCATCTT 59.364 47.826 0.00 0.00 37.46 2.40
193 194 3.117701 TCTCCTCTTGGACGATCTCATCT 60.118 47.826 0.00 0.00 37.46 2.90
194 195 3.218453 TCTCCTCTTGGACGATCTCATC 58.782 50.000 0.00 0.00 37.46 2.92
195 196 3.117701 TCTCTCCTCTTGGACGATCTCAT 60.118 47.826 0.00 0.00 37.46 2.90
196 197 2.239907 TCTCTCCTCTTGGACGATCTCA 59.760 50.000 0.00 0.00 37.46 3.27
197 198 2.925724 TCTCTCCTCTTGGACGATCTC 58.074 52.381 0.00 0.00 37.46 2.75
198 199 3.486383 GATCTCTCCTCTTGGACGATCT 58.514 50.000 0.00 0.00 39.12 2.75
199 200 2.225491 CGATCTCTCCTCTTGGACGATC 59.775 54.545 0.00 0.00 38.98 3.69
200 201 2.158740 TCGATCTCTCCTCTTGGACGAT 60.159 50.000 0.00 0.00 37.46 3.73
201 202 1.209747 TCGATCTCTCCTCTTGGACGA 59.790 52.381 0.00 0.00 37.46 4.20
202 203 1.669604 TCGATCTCTCCTCTTGGACG 58.330 55.000 0.00 0.00 37.46 4.79
203 204 3.486383 AGATCGATCTCTCCTCTTGGAC 58.514 50.000 22.32 0.00 38.26 4.02
204 205 3.874383 AGATCGATCTCTCCTCTTGGA 57.126 47.619 22.32 0.00 40.95 3.53
220 221 8.873215 TTATTTCTCCTGTAAACGATGAGATC 57.127 34.615 0.00 0.00 32.54 2.75
222 223 9.967346 CTATTATTTCTCCTGTAAACGATGAGA 57.033 33.333 0.00 0.00 0.00 3.27
223 224 9.967346 TCTATTATTTCTCCTGTAAACGATGAG 57.033 33.333 0.00 0.00 0.00 2.90
231 232 9.502035 TCCCTTCTTCTATTATTTCTCCTGTAA 57.498 33.333 0.00 0.00 0.00 2.41
232 233 9.676129 ATCCCTTCTTCTATTATTTCTCCTGTA 57.324 33.333 0.00 0.00 0.00 2.74
233 234 7.996758 TCCCTTCTTCTATTATTTCTCCTGT 57.003 36.000 0.00 0.00 0.00 4.00
246 247 9.488762 TGTAATCTGTTTCTATCCCTTCTTCTA 57.511 33.333 0.00 0.00 0.00 2.10
247 248 8.380742 TGTAATCTGTTTCTATCCCTTCTTCT 57.619 34.615 0.00 0.00 0.00 2.85
248 249 9.620259 ATTGTAATCTGTTTCTATCCCTTCTTC 57.380 33.333 0.00 0.00 0.00 2.87
249 250 9.981460 AATTGTAATCTGTTTCTATCCCTTCTT 57.019 29.630 0.00 0.00 0.00 2.52
250 251 9.620259 GAATTGTAATCTGTTTCTATCCCTTCT 57.380 33.333 0.00 0.00 0.00 2.85
251 252 9.396022 TGAATTGTAATCTGTTTCTATCCCTTC 57.604 33.333 0.00 0.00 0.00 3.46
252 253 9.753674 TTGAATTGTAATCTGTTTCTATCCCTT 57.246 29.630 0.00 0.00 0.00 3.95
253 254 9.753674 TTTGAATTGTAATCTGTTTCTATCCCT 57.246 29.630 0.00 0.00 0.00 4.20
279 280 9.607333 TCTGTTGTATAGGGATAAGATTCTCAT 57.393 33.333 0.00 0.00 0.00 2.90
280 281 9.607333 ATCTGTTGTATAGGGATAAGATTCTCA 57.393 33.333 0.00 0.00 0.00 3.27
289 290 9.656323 ACTGTTAGAATCTGTTGTATAGGGATA 57.344 33.333 0.00 0.00 0.00 2.59
290 291 8.554490 ACTGTTAGAATCTGTTGTATAGGGAT 57.446 34.615 0.00 0.00 0.00 3.85
291 292 7.069578 GGACTGTTAGAATCTGTTGTATAGGGA 59.930 40.741 0.00 0.00 0.00 4.20
292 293 7.147724 TGGACTGTTAGAATCTGTTGTATAGGG 60.148 40.741 0.00 0.00 0.00 3.53
293 294 7.782049 TGGACTGTTAGAATCTGTTGTATAGG 58.218 38.462 0.00 0.00 0.00 2.57
294 295 8.687242 TCTGGACTGTTAGAATCTGTTGTATAG 58.313 37.037 0.00 0.00 0.00 1.31
295 296 8.589701 TCTGGACTGTTAGAATCTGTTGTATA 57.410 34.615 0.00 0.00 0.00 1.47
296 297 7.364232 CCTCTGGACTGTTAGAATCTGTTGTAT 60.364 40.741 0.00 0.00 0.00 2.29
297 298 6.071334 CCTCTGGACTGTTAGAATCTGTTGTA 60.071 42.308 0.00 0.00 0.00 2.41
298 299 5.279708 CCTCTGGACTGTTAGAATCTGTTGT 60.280 44.000 0.00 0.00 0.00 3.32
299 300 5.174395 CCTCTGGACTGTTAGAATCTGTTG 58.826 45.833 0.00 0.00 0.00 3.33
300 301 4.841246 ACCTCTGGACTGTTAGAATCTGTT 59.159 41.667 0.00 0.00 0.00 3.16
301 302 4.421131 ACCTCTGGACTGTTAGAATCTGT 58.579 43.478 0.00 0.00 0.00 3.41
302 303 6.723298 ATACCTCTGGACTGTTAGAATCTG 57.277 41.667 0.00 0.00 0.00 2.90
303 304 7.817440 TCTATACCTCTGGACTGTTAGAATCT 58.183 38.462 0.00 0.00 0.00 2.40
304 305 8.354426 GTTCTATACCTCTGGACTGTTAGAATC 58.646 40.741 0.00 0.00 29.98 2.52
305 306 7.839705 TGTTCTATACCTCTGGACTGTTAGAAT 59.160 37.037 0.00 0.00 29.98 2.40
306 307 7.179966 TGTTCTATACCTCTGGACTGTTAGAA 58.820 38.462 0.00 0.00 0.00 2.10
307 308 6.728411 TGTTCTATACCTCTGGACTGTTAGA 58.272 40.000 0.00 0.00 0.00 2.10
308 309 6.460399 GCTGTTCTATACCTCTGGACTGTTAG 60.460 46.154 0.00 0.00 0.00 2.34
309 310 5.360144 GCTGTTCTATACCTCTGGACTGTTA 59.640 44.000 0.00 0.00 0.00 2.41
310 311 4.160626 GCTGTTCTATACCTCTGGACTGTT 59.839 45.833 0.00 0.00 0.00 3.16
311 312 3.702045 GCTGTTCTATACCTCTGGACTGT 59.298 47.826 0.00 0.00 0.00 3.55
312 313 3.701542 TGCTGTTCTATACCTCTGGACTG 59.298 47.826 0.00 0.00 0.00 3.51
313 314 3.982516 TGCTGTTCTATACCTCTGGACT 58.017 45.455 0.00 0.00 0.00 3.85
314 315 4.946478 ATGCTGTTCTATACCTCTGGAC 57.054 45.455 0.00 0.00 0.00 4.02
315 316 4.833380 GGTATGCTGTTCTATACCTCTGGA 59.167 45.833 0.00 0.00 43.46 3.86
316 317 4.321304 CGGTATGCTGTTCTATACCTCTGG 60.321 50.000 10.62 0.00 44.23 3.86
317 318 4.799678 CGGTATGCTGTTCTATACCTCTG 58.200 47.826 10.62 0.00 44.23 3.35
318 319 3.256136 GCGGTATGCTGTTCTATACCTCT 59.744 47.826 10.62 0.00 44.23 3.69
319 320 3.005472 TGCGGTATGCTGTTCTATACCTC 59.995 47.826 10.62 4.66 44.23 3.85
320 321 2.963101 TGCGGTATGCTGTTCTATACCT 59.037 45.455 10.62 0.00 44.23 3.08
321 322 3.318017 CTGCGGTATGCTGTTCTATACC 58.682 50.000 0.00 0.00 46.63 2.73
322 323 3.005472 TCCTGCGGTATGCTGTTCTATAC 59.995 47.826 0.00 0.00 46.63 1.47
323 324 3.227614 TCCTGCGGTATGCTGTTCTATA 58.772 45.455 0.00 0.00 46.63 1.31
324 325 2.036475 CTCCTGCGGTATGCTGTTCTAT 59.964 50.000 0.00 0.00 46.63 1.98
325 326 1.409064 CTCCTGCGGTATGCTGTTCTA 59.591 52.381 0.00 0.00 46.63 2.10
326 327 0.176680 CTCCTGCGGTATGCTGTTCT 59.823 55.000 0.00 0.00 46.63 3.01
327 328 1.432270 GCTCCTGCGGTATGCTGTTC 61.432 60.000 0.00 0.00 46.63 3.18
328 329 1.450312 GCTCCTGCGGTATGCTGTT 60.450 57.895 0.00 0.00 46.63 3.16
329 330 2.187946 GCTCCTGCGGTATGCTGT 59.812 61.111 0.00 0.00 46.63 4.40
330 331 1.886313 CAGCTCCTGCGGTATGCTG 60.886 63.158 14.32 14.32 46.63 4.41
331 332 2.503061 CAGCTCCTGCGGTATGCT 59.497 61.111 0.00 0.00 46.63 3.79
332 333 2.590007 CCAGCTCCTGCGGTATGC 60.590 66.667 0.00 0.00 45.42 3.14
333 334 2.109799 CCCAGCTCCTGCGGTATG 59.890 66.667 0.00 0.00 45.42 2.39
334 335 3.164269 CCCCAGCTCCTGCGGTAT 61.164 66.667 0.00 0.00 45.42 2.73
335 336 4.715130 ACCCCAGCTCCTGCGGTA 62.715 66.667 0.00 0.00 40.40 4.02
343 344 3.813724 CATCCCCCACCCCAGCTC 61.814 72.222 0.00 0.00 0.00 4.09
344 345 4.701437 ACATCCCCCACCCCAGCT 62.701 66.667 0.00 0.00 0.00 4.24
345 346 4.447342 CACATCCCCCACCCCAGC 62.447 72.222 0.00 0.00 0.00 4.85
346 347 1.618143 TACACATCCCCCACCCCAG 60.618 63.158 0.00 0.00 0.00 4.45
347 348 1.618143 CTACACATCCCCCACCCCA 60.618 63.158 0.00 0.00 0.00 4.96
348 349 1.307517 TCTACACATCCCCCACCCC 60.308 63.158 0.00 0.00 0.00 4.95
349 350 1.345715 CCTCTACACATCCCCCACCC 61.346 65.000 0.00 0.00 0.00 4.61
350 351 0.326238 TCCTCTACACATCCCCCACC 60.326 60.000 0.00 0.00 0.00 4.61
351 352 1.123928 CTCCTCTACACATCCCCCAC 58.876 60.000 0.00 0.00 0.00 4.61
352 353 1.015609 TCTCCTCTACACATCCCCCA 58.984 55.000 0.00 0.00 0.00 4.96
353 354 2.043227 CTTCTCCTCTACACATCCCCC 58.957 57.143 0.00 0.00 0.00 5.40
354 355 2.043227 CCTTCTCCTCTACACATCCCC 58.957 57.143 0.00 0.00 0.00 4.81
355 356 2.043227 CCCTTCTCCTCTACACATCCC 58.957 57.143 0.00 0.00 0.00 3.85
356 357 3.033659 TCCCTTCTCCTCTACACATCC 57.966 52.381 0.00 0.00 0.00 3.51
357 358 3.323403 CCATCCCTTCTCCTCTACACATC 59.677 52.174 0.00 0.00 0.00 3.06
358 359 3.051803 TCCATCCCTTCTCCTCTACACAT 60.052 47.826 0.00 0.00 0.00 3.21
359 360 2.314852 TCCATCCCTTCTCCTCTACACA 59.685 50.000 0.00 0.00 0.00 3.72
360 361 2.962421 CTCCATCCCTTCTCCTCTACAC 59.038 54.545 0.00 0.00 0.00 2.90
361 362 2.091055 CCTCCATCCCTTCTCCTCTACA 60.091 54.545 0.00 0.00 0.00 2.74
362 363 2.178106 TCCTCCATCCCTTCTCCTCTAC 59.822 54.545 0.00 0.00 0.00 2.59
363 364 2.448961 CTCCTCCATCCCTTCTCCTCTA 59.551 54.545 0.00 0.00 0.00 2.43
364 365 1.220236 CTCCTCCATCCCTTCTCCTCT 59.780 57.143 0.00 0.00 0.00 3.69
365 366 1.715785 CTCCTCCATCCCTTCTCCTC 58.284 60.000 0.00 0.00 0.00 3.71
366 367 0.399806 GCTCCTCCATCCCTTCTCCT 60.400 60.000 0.00 0.00 0.00 3.69
367 368 0.692419 TGCTCCTCCATCCCTTCTCC 60.692 60.000 0.00 0.00 0.00 3.71
368 369 1.072015 CATGCTCCTCCATCCCTTCTC 59.928 57.143 0.00 0.00 0.00 2.87
369 370 1.138568 CATGCTCCTCCATCCCTTCT 58.861 55.000 0.00 0.00 0.00 2.85
370 371 1.072015 CTCATGCTCCTCCATCCCTTC 59.928 57.143 0.00 0.00 0.00 3.46
371 372 1.138568 CTCATGCTCCTCCATCCCTT 58.861 55.000 0.00 0.00 0.00 3.95
372 373 0.030297 ACTCATGCTCCTCCATCCCT 60.030 55.000 0.00 0.00 0.00 4.20
373 374 0.108207 CACTCATGCTCCTCCATCCC 59.892 60.000 0.00 0.00 0.00 3.85
374 375 3.702147 CACTCATGCTCCTCCATCC 57.298 57.895 0.00 0.00 0.00 3.51
392 393 1.321074 ACCGTGGACTAGCAGTAGGC 61.321 60.000 0.00 0.00 45.30 3.93
393 394 0.456221 CACCGTGGACTAGCAGTAGG 59.544 60.000 0.00 0.00 0.00 3.18
394 395 0.456221 CCACCGTGGACTAGCAGTAG 59.544 60.000 12.68 0.00 40.96 2.57
395 396 0.251474 ACCACCGTGGACTAGCAGTA 60.251 55.000 24.80 0.00 40.96 2.74
396 397 1.533273 ACCACCGTGGACTAGCAGT 60.533 57.895 24.80 0.00 40.96 4.40
397 398 1.079819 CACCACCGTGGACTAGCAG 60.080 63.158 24.80 1.32 40.96 4.24
398 399 3.056458 CACCACCGTGGACTAGCA 58.944 61.111 24.80 0.00 40.96 3.49
430 431 2.182030 CTCTTCTCCACGCCCGAC 59.818 66.667 0.00 0.00 0.00 4.79
431 432 3.760035 GCTCTTCTCCACGCCCGA 61.760 66.667 0.00 0.00 0.00 5.14
432 433 3.708220 GAGCTCTTCTCCACGCCCG 62.708 68.421 6.43 0.00 35.77 6.13
433 434 2.185608 GAGCTCTTCTCCACGCCC 59.814 66.667 6.43 0.00 35.77 6.13
440 441 1.153469 CCGCCAAGGAGCTCTTCTC 60.153 63.158 14.64 0.00 45.00 2.87
441 442 2.985456 CCGCCAAGGAGCTCTTCT 59.015 61.111 14.64 0.00 45.00 2.85
442 443 2.821810 GCCGCCAAGGAGCTCTTC 60.822 66.667 14.64 0.00 45.00 2.87
443 444 3.640407 TGCCGCCAAGGAGCTCTT 61.640 61.111 14.64 2.08 45.00 2.85
444 445 4.400961 GTGCCGCCAAGGAGCTCT 62.401 66.667 14.64 0.00 45.00 4.09
458 459 4.785453 CCTCAAGGCCCTCCGTGC 62.785 72.222 0.00 0.00 40.95 5.34
459 460 3.322466 ACCTCAAGGCCCTCCGTG 61.322 66.667 0.00 0.00 42.27 4.94
460 461 3.322466 CACCTCAAGGCCCTCCGT 61.322 66.667 0.00 0.00 39.32 4.69
461 462 4.785453 GCACCTCAAGGCCCTCCG 62.785 72.222 0.00 0.00 39.32 4.63
462 463 3.334054 AGCACCTCAAGGCCCTCC 61.334 66.667 0.00 0.00 39.32 4.30
463 464 2.045536 CAGCACCTCAAGGCCCTC 60.046 66.667 0.00 0.00 39.32 4.30
464 465 3.655211 CCAGCACCTCAAGGCCCT 61.655 66.667 0.00 0.00 39.32 5.19
465 466 3.635268 CTCCAGCACCTCAAGGCCC 62.635 68.421 0.00 0.00 39.32 5.80
466 467 2.045536 CTCCAGCACCTCAAGGCC 60.046 66.667 0.00 0.00 39.32 5.19
467 468 2.045536 CCTCCAGCACCTCAAGGC 60.046 66.667 0.00 0.00 39.32 4.35
468 469 2.045536 GCCTCCAGCACCTCAAGG 60.046 66.667 0.00 0.00 42.97 3.61
469 470 2.435586 CGCCTCCAGCACCTCAAG 60.436 66.667 0.00 0.00 44.04 3.02
470 471 4.020617 CCGCCTCCAGCACCTCAA 62.021 66.667 0.00 0.00 44.04 3.02
489 490 3.112075 CTATGCCATACGCCGCCG 61.112 66.667 0.00 0.00 41.14 6.46
490 491 2.742372 CCTATGCCATACGCCGCC 60.742 66.667 0.00 0.00 36.24 6.13
491 492 2.742372 CCCTATGCCATACGCCGC 60.742 66.667 0.00 0.00 36.24 6.53
492 493 1.667830 CACCCTATGCCATACGCCG 60.668 63.158 0.00 0.00 36.24 6.46
493 494 4.379174 CACCCTATGCCATACGCC 57.621 61.111 0.00 0.00 36.24 5.68
502 503 1.488390 AAAGCCCATTGCACCCTATG 58.512 50.000 0.00 0.00 44.83 2.23
503 504 2.252535 AAAAGCCCATTGCACCCTAT 57.747 45.000 0.00 0.00 44.83 2.57
504 505 1.899142 GAAAAAGCCCATTGCACCCTA 59.101 47.619 0.00 0.00 44.83 3.53
505 506 0.686789 GAAAAAGCCCATTGCACCCT 59.313 50.000 0.00 0.00 44.83 4.34
506 507 0.686789 AGAAAAAGCCCATTGCACCC 59.313 50.000 0.00 0.00 44.83 4.61
507 508 1.608801 CCAGAAAAAGCCCATTGCACC 60.609 52.381 0.00 0.00 44.83 5.01
508 509 1.799544 CCAGAAAAAGCCCATTGCAC 58.200 50.000 0.00 0.00 44.83 4.57
509 510 0.035176 GCCAGAAAAAGCCCATTGCA 59.965 50.000 0.00 0.00 44.83 4.08
510 511 0.674581 GGCCAGAAAAAGCCCATTGC 60.675 55.000 0.00 0.00 43.76 3.56
511 512 3.538379 GGCCAGAAAAAGCCCATTG 57.462 52.632 0.00 0.00 43.76 2.82
517 518 0.523519 CTTCTCGGGCCAGAAAAAGC 59.476 55.000 7.12 0.00 31.86 3.51
518 519 2.185004 TCTTCTCGGGCCAGAAAAAG 57.815 50.000 16.76 16.76 31.86 2.27
519 520 2.879103 ATCTTCTCGGGCCAGAAAAA 57.121 45.000 7.12 3.73 31.86 1.94
520 521 2.879103 AATCTTCTCGGGCCAGAAAA 57.121 45.000 7.12 0.00 31.86 2.29
521 522 2.039746 TGAAATCTTCTCGGGCCAGAAA 59.960 45.455 7.12 3.94 31.86 2.52
522 523 1.628340 TGAAATCTTCTCGGGCCAGAA 59.372 47.619 7.12 10.97 0.00 3.02
523 524 1.208052 CTGAAATCTTCTCGGGCCAGA 59.792 52.381 4.39 4.83 0.00 3.86
524 525 1.208052 TCTGAAATCTTCTCGGGCCAG 59.792 52.381 4.39 0.00 0.00 4.85
525 526 1.208052 CTCTGAAATCTTCTCGGGCCA 59.792 52.381 4.39 0.00 0.00 5.36
526 527 1.208293 ACTCTGAAATCTTCTCGGGCC 59.792 52.381 0.00 0.00 0.00 5.80
527 528 2.275318 CACTCTGAAATCTTCTCGGGC 58.725 52.381 0.00 0.00 0.00 6.13
528 529 3.601443 ACACTCTGAAATCTTCTCGGG 57.399 47.619 0.00 0.00 0.00 5.14
529 530 4.677584 CCTACACTCTGAAATCTTCTCGG 58.322 47.826 0.00 0.00 0.00 4.63
530 531 4.109050 GCCTACACTCTGAAATCTTCTCG 58.891 47.826 0.00 0.00 0.00 4.04
531 532 5.078411 TGCCTACACTCTGAAATCTTCTC 57.922 43.478 0.00 0.00 0.00 2.87
532 533 4.530161 ACTGCCTACACTCTGAAATCTTCT 59.470 41.667 0.00 0.00 0.00 2.85
533 534 4.629200 CACTGCCTACACTCTGAAATCTTC 59.371 45.833 0.00 0.00 0.00 2.87
534 535 4.040952 ACACTGCCTACACTCTGAAATCTT 59.959 41.667 0.00 0.00 0.00 2.40
535 536 3.580458 ACACTGCCTACACTCTGAAATCT 59.420 43.478 0.00 0.00 0.00 2.40
536 537 3.929610 GACACTGCCTACACTCTGAAATC 59.070 47.826 0.00 0.00 0.00 2.17
537 538 3.580458 AGACACTGCCTACACTCTGAAAT 59.420 43.478 0.00 0.00 0.00 2.17
538 539 2.965831 AGACACTGCCTACACTCTGAAA 59.034 45.455 0.00 0.00 0.00 2.69
539 540 2.598565 AGACACTGCCTACACTCTGAA 58.401 47.619 0.00 0.00 0.00 3.02
540 541 2.294449 AGACACTGCCTACACTCTGA 57.706 50.000 0.00 0.00 0.00 3.27
541 542 2.560542 AGAAGACACTGCCTACACTCTG 59.439 50.000 0.00 0.00 0.00 3.35
542 543 2.823154 GAGAAGACACTGCCTACACTCT 59.177 50.000 0.00 0.00 0.00 3.24
543 544 2.558795 TGAGAAGACACTGCCTACACTC 59.441 50.000 0.00 0.00 0.00 3.51
544 545 2.297597 GTGAGAAGACACTGCCTACACT 59.702 50.000 0.00 0.00 37.73 3.55
545 546 2.678324 GTGAGAAGACACTGCCTACAC 58.322 52.381 0.00 0.00 37.73 2.90
563 564 3.618780 GGCCTGGAGCACTGGAGTG 62.619 68.421 0.00 2.19 46.50 3.51
564 565 3.325753 GGCCTGGAGCACTGGAGT 61.326 66.667 0.00 0.00 46.50 3.85
565 566 4.106925 GGGCCTGGAGCACTGGAG 62.107 72.222 0.84 0.00 43.83 3.86
571 572 2.202236 GATTGTCTGGGCCTGGAGCA 62.202 60.000 10.79 5.05 46.50 4.26
572 573 1.452833 GATTGTCTGGGCCTGGAGC 60.453 63.158 10.79 2.54 42.60 4.70
573 574 1.153289 CGATTGTCTGGGCCTGGAG 60.153 63.158 10.79 0.00 0.00 3.86
574 575 1.198094 TTCGATTGTCTGGGCCTGGA 61.198 55.000 10.79 3.09 0.00 3.86
575 576 1.026718 GTTCGATTGTCTGGGCCTGG 61.027 60.000 10.79 0.45 0.00 4.45
576 577 1.361668 CGTTCGATTGTCTGGGCCTG 61.362 60.000 4.53 4.06 0.00 4.85
577 578 1.079127 CGTTCGATTGTCTGGGCCT 60.079 57.895 4.53 0.00 0.00 5.19
578 579 2.750888 GCGTTCGATTGTCTGGGCC 61.751 63.158 0.00 0.00 0.00 5.80
579 580 1.573829 TTGCGTTCGATTGTCTGGGC 61.574 55.000 0.00 0.00 0.00 5.36
580 581 0.443869 CTTGCGTTCGATTGTCTGGG 59.556 55.000 0.00 0.00 0.00 4.45
581 582 0.179215 GCTTGCGTTCGATTGTCTGG 60.179 55.000 0.00 0.00 0.00 3.86
582 583 0.179215 GGCTTGCGTTCGATTGTCTG 60.179 55.000 0.00 0.00 0.00 3.51
583 584 0.320771 AGGCTTGCGTTCGATTGTCT 60.321 50.000 0.00 0.00 0.00 3.41
584 585 0.095417 GAGGCTTGCGTTCGATTGTC 59.905 55.000 0.00 0.00 0.00 3.18
585 586 1.298859 GGAGGCTTGCGTTCGATTGT 61.299 55.000 0.00 0.00 0.00 2.71
586 587 1.021390 AGGAGGCTTGCGTTCGATTG 61.021 55.000 0.00 0.00 0.00 2.67
587 588 1.021390 CAGGAGGCTTGCGTTCGATT 61.021 55.000 0.00 0.00 0.00 3.34
588 589 1.448540 CAGGAGGCTTGCGTTCGAT 60.449 57.895 0.00 0.00 0.00 3.59
589 590 2.048222 CAGGAGGCTTGCGTTCGA 60.048 61.111 0.00 0.00 0.00 3.71
590 591 3.121030 CCAGGAGGCTTGCGTTCG 61.121 66.667 0.00 0.00 0.00 3.95
591 592 1.600916 AACCAGGAGGCTTGCGTTC 60.601 57.895 0.00 0.00 39.06 3.95
592 593 1.898574 CAACCAGGAGGCTTGCGTT 60.899 57.895 0.00 0.00 39.06 4.84
593 594 2.281761 CAACCAGGAGGCTTGCGT 60.282 61.111 0.00 0.00 39.06 5.24
594 595 3.058160 CCAACCAGGAGGCTTGCG 61.058 66.667 0.00 0.00 41.22 4.85
595 596 2.677875 CCCAACCAGGAGGCTTGC 60.678 66.667 0.00 0.00 41.22 4.01
596 597 1.303643 GACCCAACCAGGAGGCTTG 60.304 63.158 0.00 0.00 41.22 4.01
597 598 2.895424 CGACCCAACCAGGAGGCTT 61.895 63.158 0.00 0.00 41.22 4.35
598 599 3.322466 CGACCCAACCAGGAGGCT 61.322 66.667 0.00 0.00 41.22 4.58
599 600 4.410400 CCGACCCAACCAGGAGGC 62.410 72.222 0.00 0.00 41.22 4.70
600 601 3.717294 CCCGACCCAACCAGGAGG 61.717 72.222 0.00 0.00 41.22 4.30
601 602 3.717294 CCCCGACCCAACCAGGAG 61.717 72.222 0.00 0.00 41.22 3.69
602 603 4.585216 ACCCCGACCCAACCAGGA 62.585 66.667 0.00 0.00 41.22 3.86
603 604 4.344865 CACCCCGACCCAACCAGG 62.345 72.222 0.00 0.00 37.03 4.45
604 605 4.344865 CCACCCCGACCCAACCAG 62.345 72.222 0.00 0.00 0.00 4.00
606 607 4.653888 CACCACCCCGACCCAACC 62.654 72.222 0.00 0.00 0.00 3.77
607 608 4.653888 CCACCACCCCGACCCAAC 62.654 72.222 0.00 0.00 0.00 3.77
608 609 4.902258 TCCACCACCCCGACCCAA 62.902 66.667 0.00 0.00 0.00 4.12
609 610 4.902258 TTCCACCACCCCGACCCA 62.902 66.667 0.00 0.00 0.00 4.51
610 611 3.572222 TTTCCACCACCCCGACCC 61.572 66.667 0.00 0.00 0.00 4.46
611 612 2.281970 GTTTCCACCACCCCGACC 60.282 66.667 0.00 0.00 0.00 4.79
612 613 2.667199 CGTTTCCACCACCCCGAC 60.667 66.667 0.00 0.00 0.00 4.79
613 614 3.943691 CCGTTTCCACCACCCCGA 61.944 66.667 0.00 0.00 0.00 5.14
614 615 3.262448 ATCCGTTTCCACCACCCCG 62.262 63.158 0.00 0.00 0.00 5.73
615 616 1.677633 CATCCGTTTCCACCACCCC 60.678 63.158 0.00 0.00 0.00 4.95
616 617 1.677633 CCATCCGTTTCCACCACCC 60.678 63.158 0.00 0.00 0.00 4.61
617 618 0.250989 TTCCATCCGTTTCCACCACC 60.251 55.000 0.00 0.00 0.00 4.61
618 619 1.165270 CTTCCATCCGTTTCCACCAC 58.835 55.000 0.00 0.00 0.00 4.16
619 620 1.060729 TCTTCCATCCGTTTCCACCA 58.939 50.000 0.00 0.00 0.00 4.17
620 621 2.194201 TTCTTCCATCCGTTTCCACC 57.806 50.000 0.00 0.00 0.00 4.61
621 622 3.146847 AGTTTCTTCCATCCGTTTCCAC 58.853 45.455 0.00 0.00 0.00 4.02
622 623 3.502123 AGTTTCTTCCATCCGTTTCCA 57.498 42.857 0.00 0.00 0.00 3.53
623 624 3.818773 TGAAGTTTCTTCCATCCGTTTCC 59.181 43.478 6.98 0.00 0.00 3.13
624 625 4.274950 TGTGAAGTTTCTTCCATCCGTTTC 59.725 41.667 6.98 0.00 0.00 2.78
625 626 4.204012 TGTGAAGTTTCTTCCATCCGTTT 58.796 39.130 6.98 0.00 0.00 3.60
626 627 3.815809 TGTGAAGTTTCTTCCATCCGTT 58.184 40.909 6.98 0.00 0.00 4.44
627 628 3.485463 TGTGAAGTTTCTTCCATCCGT 57.515 42.857 6.98 0.00 0.00 4.69
628 629 3.815401 ACTTGTGAAGTTTCTTCCATCCG 59.185 43.478 6.98 0.00 39.04 4.18
640 641 7.793927 TTTCCAAAACAAAAACTTGTGAAGT 57.206 28.000 0.00 0.00 45.46 3.01
663 664 6.849151 AGGTGTAGTTTCTACCCTCATTTTT 58.151 36.000 4.77 0.00 35.03 1.94
664 665 6.449830 AGGTGTAGTTTCTACCCTCATTTT 57.550 37.500 4.77 0.00 35.03 1.82
665 666 6.449830 AAGGTGTAGTTTCTACCCTCATTT 57.550 37.500 13.25 1.80 35.03 2.32
666 667 7.750947 ATAAGGTGTAGTTTCTACCCTCATT 57.249 36.000 13.25 7.57 35.03 2.57
667 668 8.287350 TCTATAAGGTGTAGTTTCTACCCTCAT 58.713 37.037 13.25 9.49 35.03 2.90
668 669 7.645942 TCTATAAGGTGTAGTTTCTACCCTCA 58.354 38.462 13.25 4.61 35.03 3.86
669 670 8.530804 TTCTATAAGGTGTAGTTTCTACCCTC 57.469 38.462 13.25 3.20 35.03 4.30
670 671 8.906238 TTTCTATAAGGTGTAGTTTCTACCCT 57.094 34.615 4.77 7.48 35.03 4.34
682 683 8.812972 TGACAACAGAGTATTTCTATAAGGTGT 58.187 33.333 0.00 0.00 30.98 4.16
683 684 9.653287 TTGACAACAGAGTATTTCTATAAGGTG 57.347 33.333 0.00 0.00 33.83 4.00
687 688 9.701098 ACGTTTGACAACAGAGTATTTCTATAA 57.299 29.630 0.00 0.00 33.83 0.98
689 690 9.355215 CTACGTTTGACAACAGAGTATTTCTAT 57.645 33.333 0.00 0.00 33.83 1.98
690 691 7.327761 GCTACGTTTGACAACAGAGTATTTCTA 59.672 37.037 0.00 0.00 33.83 2.10
691 692 6.145696 GCTACGTTTGACAACAGAGTATTTCT 59.854 38.462 0.00 0.00 36.25 2.52
692 693 6.297353 GCTACGTTTGACAACAGAGTATTTC 58.703 40.000 0.00 0.00 32.54 2.17
693 694 5.178809 GGCTACGTTTGACAACAGAGTATTT 59.821 40.000 0.00 0.00 32.54 1.40
694 695 4.689345 GGCTACGTTTGACAACAGAGTATT 59.311 41.667 0.00 0.00 32.54 1.89
695 696 4.021368 AGGCTACGTTTGACAACAGAGTAT 60.021 41.667 0.00 0.00 32.54 2.12
696 697 3.319972 AGGCTACGTTTGACAACAGAGTA 59.680 43.478 0.00 0.00 32.54 2.59
697 698 2.102588 AGGCTACGTTTGACAACAGAGT 59.897 45.455 0.00 0.00 32.54 3.24
698 699 2.755650 AGGCTACGTTTGACAACAGAG 58.244 47.619 0.00 0.00 32.54 3.35
699 700 2.902705 AGGCTACGTTTGACAACAGA 57.097 45.000 0.00 0.00 32.54 3.41
700 701 4.084013 CCTTTAGGCTACGTTTGACAACAG 60.084 45.833 0.00 0.00 32.54 3.16
701 702 3.810941 CCTTTAGGCTACGTTTGACAACA 59.189 43.478 0.00 0.00 32.54 3.33
702 703 4.060205 TCCTTTAGGCTACGTTTGACAAC 58.940 43.478 0.00 0.00 34.44 3.32
703 704 4.339872 TCCTTTAGGCTACGTTTGACAA 57.660 40.909 0.00 0.00 34.44 3.18
704 705 4.060205 GTTCCTTTAGGCTACGTTTGACA 58.940 43.478 0.00 0.00 34.44 3.58
705 706 4.151867 CAGTTCCTTTAGGCTACGTTTGAC 59.848 45.833 0.00 0.00 34.44 3.18
706 707 4.312443 CAGTTCCTTTAGGCTACGTTTGA 58.688 43.478 0.00 0.00 34.44 2.69
707 708 3.435671 CCAGTTCCTTTAGGCTACGTTTG 59.564 47.826 0.00 0.00 34.44 2.93
708 709 3.072038 ACCAGTTCCTTTAGGCTACGTTT 59.928 43.478 0.00 0.00 34.44 3.60
709 710 2.636403 ACCAGTTCCTTTAGGCTACGTT 59.364 45.455 0.00 0.00 34.44 3.99
710 711 2.254508 ACCAGTTCCTTTAGGCTACGT 58.745 47.619 0.00 0.00 34.44 3.57
711 712 3.000727 CAACCAGTTCCTTTAGGCTACG 58.999 50.000 0.00 0.00 34.44 3.51
712 713 4.254492 CTCAACCAGTTCCTTTAGGCTAC 58.746 47.826 0.00 0.00 34.44 3.58
713 714 3.908103 ACTCAACCAGTTCCTTTAGGCTA 59.092 43.478 0.00 0.00 34.44 3.93
714 715 2.711547 ACTCAACCAGTTCCTTTAGGCT 59.288 45.455 0.00 0.00 34.44 4.58
715 716 3.141767 ACTCAACCAGTTCCTTTAGGC 57.858 47.619 0.00 0.00 34.44 3.93
716 717 7.593825 CAATTTACTCAACCAGTTCCTTTAGG 58.406 38.462 0.00 0.00 36.43 2.69
717 718 7.084486 GCAATTTACTCAACCAGTTCCTTTAG 58.916 38.462 0.00 0.00 36.43 1.85
718 719 6.547880 TGCAATTTACTCAACCAGTTCCTTTA 59.452 34.615 0.00 0.00 36.43 1.85
719 720 5.362430 TGCAATTTACTCAACCAGTTCCTTT 59.638 36.000 0.00 0.00 36.43 3.11
720 721 4.892934 TGCAATTTACTCAACCAGTTCCTT 59.107 37.500 0.00 0.00 36.43 3.36
721 722 4.469657 TGCAATTTACTCAACCAGTTCCT 58.530 39.130 0.00 0.00 36.43 3.36
722 723 4.846779 TGCAATTTACTCAACCAGTTCC 57.153 40.909 0.00 0.00 36.43 3.62
723 724 8.699749 GTTTTATGCAATTTACTCAACCAGTTC 58.300 33.333 0.00 0.00 36.43 3.01
724 725 7.655732 GGTTTTATGCAATTTACTCAACCAGTT 59.344 33.333 0.00 0.00 36.43 3.16
725 726 7.151976 GGTTTTATGCAATTTACTCAACCAGT 58.848 34.615 0.00 0.00 39.41 4.00
726 727 7.116233 GTGGTTTTATGCAATTTACTCAACCAG 59.884 37.037 0.00 0.00 41.31 4.00
727 728 6.926272 GTGGTTTTATGCAATTTACTCAACCA 59.074 34.615 0.00 0.00 39.02 3.67
728 729 6.367695 GGTGGTTTTATGCAATTTACTCAACC 59.632 38.462 0.00 0.00 33.20 3.77
729 730 6.926272 TGGTGGTTTTATGCAATTTACTCAAC 59.074 34.615 0.00 0.00 0.00 3.18
870 883 1.104577 GTGAAAAACGGGCTCCACCA 61.105 55.000 0.00 0.00 42.05 4.17
876 889 0.107268 ACGTAGGTGAAAAACGGGCT 59.893 50.000 0.00 0.00 40.81 5.19
926 949 2.813908 GGCACCGTCTAACGCCAG 60.814 66.667 0.00 0.00 44.25 4.85
947 970 2.202756 CTAGGACCGAACGGCAGC 60.203 66.667 13.32 3.27 39.32 5.25
976 1053 1.523758 GAGAAGTGGCAACGGTTCAT 58.476 50.000 0.00 0.00 42.51 2.57
1112 1271 3.310307 TGTGCTCGCTGCTACCCA 61.310 61.111 0.00 0.00 43.37 4.51
1115 1274 3.468007 CAGTGTGCTCGCTGCTAC 58.532 61.111 15.63 0.00 43.64 3.58
1131 1290 3.369175 AGCTGATCTCATGTACTCCACA 58.631 45.455 0.00 0.00 42.69 4.17
1225 1384 6.539173 TGGTCCATAGTTTGAAAAGAAGCTA 58.461 36.000 0.00 0.00 0.00 3.32
1361 1521 1.529438 CTTCGAAAGCAACACGCCTTA 59.471 47.619 0.00 0.00 44.04 2.69
1545 1881 8.416329 GGCAGAGTAAACAATTAATGAATCCAT 58.584 33.333 0.00 0.00 33.66 3.41
1583 1919 1.133513 ACAATGTTGCCAGGACCAGAA 60.134 47.619 0.00 0.00 0.00 3.02
1590 1926 4.522789 ACCTAACTAAACAATGTTGCCAGG 59.477 41.667 0.00 5.34 0.00 4.45
1772 2180 6.996282 ACTACTAAGTAAACAATGCTGGTGTT 59.004 34.615 0.00 0.00 40.92 3.32
1802 2210 7.492344 AGAAAAACAATGGTTTGCTCTAAAGTG 59.508 33.333 0.00 0.00 46.20 3.16
1814 2299 9.143155 AGTAAACATCCTAGAAAAACAATGGTT 57.857 29.630 0.00 0.00 39.43 3.67
1815 2300 8.706322 AGTAAACATCCTAGAAAAACAATGGT 57.294 30.769 0.00 0.00 0.00 3.55
1816 2301 9.981114 AAAGTAAACATCCTAGAAAAACAATGG 57.019 29.630 0.00 0.00 0.00 3.16
1824 2309 9.667107 CATGTCCTAAAGTAAACATCCTAGAAA 57.333 33.333 0.00 0.00 30.16 2.52
1825 2310 8.822805 ACATGTCCTAAAGTAAACATCCTAGAA 58.177 33.333 0.00 0.00 30.16 2.10
1826 2311 8.375493 ACATGTCCTAAAGTAAACATCCTAGA 57.625 34.615 0.00 0.00 30.16 2.43
1827 2312 9.449719 AAACATGTCCTAAAGTAAACATCCTAG 57.550 33.333 0.00 0.00 30.16 3.02
1829 2314 9.802039 TTAAACATGTCCTAAAGTAAACATCCT 57.198 29.630 0.00 0.00 30.16 3.24
1858 2343 9.955102 TCATATCATGCAAGCTAAAGATAGAAT 57.045 29.630 0.00 0.00 0.00 2.40
1859 2344 9.783081 TTCATATCATGCAAGCTAAAGATAGAA 57.217 29.630 0.00 0.00 0.00 2.10
1860 2345 9.955102 ATTCATATCATGCAAGCTAAAGATAGA 57.045 29.630 0.00 0.00 0.00 1.98
2176 2670 1.000739 CCTGGGCATCCATTGGTGT 59.999 57.895 1.86 0.00 43.11 4.16
2180 2674 1.076559 TGCTCCTGGGCATCCATTG 60.077 57.895 5.85 0.00 43.11 2.82
2181 2675 1.229359 CTGCTCCTGGGCATCCATT 59.771 57.895 9.75 0.00 43.11 3.16
2221 2715 3.197265 GCAACTTGGTTGTTTCAGCATT 58.803 40.909 11.27 0.00 44.40 3.56
2243 2737 4.220821 TCTTCACAGTGTCATACTTCTCCC 59.779 45.833 0.00 0.00 37.60 4.30
2290 2784 6.716628 AGCTTCAACTTCATGTTCCTAATGAA 59.283 34.615 0.00 0.00 40.77 2.57
2322 2816 4.019051 TGGATCTGCAAATTCTTCCTCTCA 60.019 41.667 0.00 0.00 0.00 3.27
2585 3098 4.032960 TCAAATACCACCACATTCAGCT 57.967 40.909 0.00 0.00 0.00 4.24
2662 3175 8.964476 ACATTAACCATCTCTAAATACCACTG 57.036 34.615 0.00 0.00 0.00 3.66
2754 3338 3.054361 CCCACTTGCCCTACTTAACTCAT 60.054 47.826 0.00 0.00 0.00 2.90
2801 3387 0.454600 GTCCTACTTGATGCGTCGGA 59.545 55.000 0.58 0.00 0.00 4.55
2806 3392 3.865745 CCTAACTTGTCCTACTTGATGCG 59.134 47.826 0.00 0.00 0.00 4.73
2902 3586 4.137543 CCTAATTGACCCTACATGAAGCC 58.862 47.826 0.00 0.00 0.00 4.35
2905 3589 5.789574 AACCCTAATTGACCCTACATGAA 57.210 39.130 0.00 0.00 0.00 2.57
2909 3593 5.771165 GTCAAAAACCCTAATTGACCCTACA 59.229 40.000 6.61 0.00 44.42 2.74
2923 4440 5.688621 GGTGTCGATAAAAAGTCAAAAACCC 59.311 40.000 0.00 0.00 0.00 4.11
2932 4449 2.028385 AGCCTCGGTGTCGATAAAAAGT 60.028 45.455 0.00 0.00 45.04 2.66
3260 4828 2.894902 TCGACAAAAAGCCAAAAACCC 58.105 42.857 0.00 0.00 0.00 4.11
3281 4851 0.895530 CCCTACTTGAAGCCTCGACA 59.104 55.000 0.00 0.00 0.00 4.35
3283 4853 1.183549 GACCCTACTTGAAGCCTCGA 58.816 55.000 0.00 0.00 0.00 4.04
3290 4860 5.853572 AACCCTAATTGACCCTACTTGAA 57.146 39.130 0.00 0.00 0.00 2.69
3331 4903 0.896226 GACCCTACTTGAAGCCTCGT 59.104 55.000 0.00 0.00 0.00 4.18
3346 4918 1.686587 CCAAAAACCCTCACTTGACCC 59.313 52.381 0.00 0.00 0.00 4.46
3359 4931 4.317069 CGACATCGACAAAAAGCCAAAAAC 60.317 41.667 0.00 0.00 43.02 2.43
3373 4945 1.272781 CTTGAAGCCTCGACATCGAC 58.727 55.000 0.00 0.00 44.22 4.20
3378 4950 0.895530 CCCTACTTGAAGCCTCGACA 59.104 55.000 0.00 0.00 0.00 4.35
3379 4951 0.896226 ACCCTACTTGAAGCCTCGAC 59.104 55.000 0.00 0.00 0.00 4.20
3380 4952 1.183549 GACCCTACTTGAAGCCTCGA 58.816 55.000 0.00 0.00 0.00 4.04
3446 5069 1.219469 AGCCCAAAACCCTAACTTGGT 59.781 47.619 0.00 0.00 38.35 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.