Multiple sequence alignment - TraesCS7A01G559800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G559800 chr7A 100.000 1981 0 0 1 1981 731696964 731698944 0.000000e+00 3659.0
1 TraesCS7A01G559800 chr7A 100.000 190 0 0 2292 2481 731699255 731699444 3.930000e-93 351.0
2 TraesCS7A01G559800 chr7A 88.889 54 4 2 1771 1822 238561486 238561433 5.730000e-07 65.8
3 TraesCS7A01G559800 chr7D 89.488 1094 86 10 659 1751 634561939 634560874 0.000000e+00 1356.0
4 TraesCS7A01G559800 chr6A 96.682 663 20 1 1 663 562397974 562397314 0.000000e+00 1101.0
5 TraesCS7A01G559800 chr5A 96.049 658 26 0 3 660 568487247 568486590 0.000000e+00 1072.0
6 TraesCS7A01G559800 chr5A 91.554 663 53 2 3 662 511910433 511909771 0.000000e+00 911.0
7 TraesCS7A01G559800 chr5A 83.710 221 26 5 1771 1981 671516773 671516553 1.500000e-47 200.0
8 TraesCS7A01G559800 chr1B 91.679 661 49 3 3 659 640489738 640490396 0.000000e+00 911.0
9 TraesCS7A01G559800 chr1B 91.377 661 51 3 3 659 377261637 377262295 0.000000e+00 900.0
10 TraesCS7A01G559800 chr1B 91.377 661 51 3 3 659 377262406 377263064 0.000000e+00 900.0
11 TraesCS7A01G559800 chr1B 91.377 661 51 3 3 659 640490672 640491330 0.000000e+00 900.0
12 TraesCS7A01G559800 chr5B 91.502 659 54 1 3 659 239305465 239306123 0.000000e+00 905.0
13 TraesCS7A01G559800 chr5B 91.528 661 50 3 3 659 655134377 655133719 0.000000e+00 905.0
14 TraesCS7A01G559800 chr5B 86.452 155 20 1 1828 1981 272557003 272556849 4.240000e-38 169.0
15 TraesCS7A01G559800 chr1D 86.239 218 21 3 1771 1979 493499906 493500123 6.900000e-56 228.0
16 TraesCS7A01G559800 chr1D 83.645 214 26 4 1771 1975 227341304 227341517 2.520000e-45 193.0
17 TraesCS7A01G559800 chr1D 86.441 118 10 1 2295 2406 366479057 366478940 9.320000e-25 124.0
18 TraesCS7A01G559800 chr1D 82.569 109 15 1 1181 1289 460554650 460554754 2.630000e-15 93.5
19 TraesCS7A01G559800 chr1A 81.081 296 47 7 794 1084 584526524 584526815 6.900000e-56 228.0
20 TraesCS7A01G559800 chr1A 81.696 224 28 9 1771 1981 469434285 469434062 9.120000e-40 174.0
21 TraesCS7A01G559800 chr1A 94.253 87 5 0 2395 2481 5637001 5636915 1.550000e-27 134.0
22 TraesCS7A01G559800 chr5D 83.178 214 27 5 1771 1975 287682390 287682603 1.170000e-43 187.0
23 TraesCS7A01G559800 chr5D 81.595 163 23 3 2292 2448 2583803 2583964 7.200000e-26 128.0
24 TraesCS7A01G559800 chr5D 86.441 118 10 1 2295 2406 37118656 37118539 9.320000e-25 124.0
25 TraesCS7A01G559800 chr5D 86.441 118 10 1 2292 2403 192260614 192260731 9.320000e-25 124.0
26 TraesCS7A01G559800 chr2D 82.805 221 24 8 1771 1981 187649143 187649359 4.210000e-43 185.0
27 TraesCS7A01G559800 chrUn 89.286 140 13 2 1843 1981 101787380 101787242 9.120000e-40 174.0
28 TraesCS7A01G559800 chrUn 87.912 91 8 3 1213 1301 30689825 30689914 1.210000e-18 104.0
29 TraesCS7A01G559800 chr6B 83.163 196 23 5 2292 2481 655853985 655853794 1.180000e-38 171.0
30 TraesCS7A01G559800 chr6B 75.482 363 52 21 979 1314 185357 185709 2.570000e-30 143.0
31 TraesCS7A01G559800 chr6B 94.253 87 5 0 2395 2481 275767624 275767710 1.550000e-27 134.0
32 TraesCS7A01G559800 chr2A 83.696 184 23 4 2304 2481 670675808 670675626 1.530000e-37 167.0
33 TraesCS7A01G559800 chr2B 79.186 221 33 9 1771 1981 110133506 110133723 9.250000e-30 141.0
34 TraesCS7A01G559800 chr2B 94.253 87 5 0 2395 2481 39772579 39772665 1.550000e-27 134.0
35 TraesCS7A01G559800 chr2B 94.253 87 5 0 2395 2481 694628897 694628811 1.550000e-27 134.0
36 TraesCS7A01G559800 chr2B 85.124 121 12 2 2292 2406 699037198 699037318 4.330000e-23 119.0
37 TraesCS7A01G559800 chr4A 95.402 87 3 1 2395 2481 494633327 494633242 1.200000e-28 137.0
38 TraesCS7A01G559800 chr4B 76.692 266 46 14 1233 1492 588551034 588551289 1.550000e-27 134.0
39 TraesCS7A01G559800 chr4B 76.779 267 44 16 1233 1492 588582860 588583115 1.550000e-27 134.0
40 TraesCS7A01G559800 chr4B 94.253 87 4 1 2395 2481 638431891 638431976 5.570000e-27 132.0
41 TraesCS7A01G559800 chr4D 87.288 118 9 1 2292 2403 66509415 66509532 2.000000e-26 130.0
42 TraesCS7A01G559800 chr3B 85.841 113 15 1 2292 2403 46487896 46488008 4.330000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G559800 chr7A 731696964 731699444 2480 False 2005.0 3659 100.000 1 2481 2 chr7A.!!$F1 2480
1 TraesCS7A01G559800 chr7D 634560874 634561939 1065 True 1356.0 1356 89.488 659 1751 1 chr7D.!!$R1 1092
2 TraesCS7A01G559800 chr6A 562397314 562397974 660 True 1101.0 1101 96.682 1 663 1 chr6A.!!$R1 662
3 TraesCS7A01G559800 chr5A 568486590 568487247 657 True 1072.0 1072 96.049 3 660 1 chr5A.!!$R2 657
4 TraesCS7A01G559800 chr5A 511909771 511910433 662 True 911.0 911 91.554 3 662 1 chr5A.!!$R1 659
5 TraesCS7A01G559800 chr1B 640489738 640491330 1592 False 905.5 911 91.528 3 659 2 chr1B.!!$F2 656
6 TraesCS7A01G559800 chr1B 377261637 377263064 1427 False 900.0 900 91.377 3 659 2 chr1B.!!$F1 656
7 TraesCS7A01G559800 chr5B 239305465 239306123 658 False 905.0 905 91.502 3 659 1 chr5B.!!$F1 656
8 TraesCS7A01G559800 chr5B 655133719 655134377 658 True 905.0 905 91.528 3 659 1 chr5B.!!$R2 656

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 118 1.489649 CCTCCCGTGTCTCCTACTCTA 59.51 57.143 0.0 0.0 0.0 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1783 3491 0.035458 ATCGATTCCGCCAATCCCTC 59.965 55.0 0.0 0.0 38.17 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 1.489649 CCTCCCGTGTCTCCTACTCTA 59.510 57.143 0.00 0.00 0.00 2.43
611 2319 6.735678 AATGTATCTGCGTATGTTTTGTGA 57.264 33.333 0.00 0.00 0.00 3.58
673 2381 9.523168 AAGTAGTATAGAGTAGGTGATGATTCC 57.477 37.037 0.00 0.00 0.00 3.01
705 2413 9.646522 ACAATATCTTCCTAATTACCTGCATTT 57.353 29.630 0.00 0.00 0.00 2.32
719 2427 9.664332 ATTACCTGCATTTGTATTTATTTTGCA 57.336 25.926 0.00 0.00 37.13 4.08
722 2430 7.094848 ACCTGCATTTGTATTTATTTTGCAACC 60.095 33.333 0.00 0.00 38.07 3.77
785 2493 2.239654 CCTTGATTTCTGTGCTAGGGGA 59.760 50.000 0.00 0.00 0.00 4.81
817 2525 8.498054 TGAATGAGGCTTCATAGTCTAAAAAG 57.502 34.615 12.23 1.88 43.20 2.27
862 2570 3.008923 TGGATGTTTACTGCAGTGGATCA 59.991 43.478 29.57 20.44 0.00 2.92
871 2579 3.009473 ACTGCAGTGGATCATGGTAAGTT 59.991 43.478 20.97 0.00 0.00 2.66
875 2583 6.524734 TGCAGTGGATCATGGTAAGTTATAG 58.475 40.000 0.00 0.00 0.00 1.31
880 2588 6.425114 GTGGATCATGGTAAGTTATAGCACTG 59.575 42.308 0.00 0.00 0.00 3.66
883 2591 6.747414 TCATGGTAAGTTATAGCACTGGAT 57.253 37.500 0.00 0.00 0.00 3.41
884 2592 6.524734 TCATGGTAAGTTATAGCACTGGATG 58.475 40.000 0.00 0.00 0.00 3.51
905 2613 4.780815 TGTCTTCTCTCATCCTCTCTCTC 58.219 47.826 0.00 0.00 0.00 3.20
911 2619 9.782900 TCTTCTCTCATCCTCTCTCTCTATATA 57.217 37.037 0.00 0.00 0.00 0.86
920 2628 6.555738 TCCTCTCTCTCTATATATACGAGGGG 59.444 46.154 14.22 13.26 38.68 4.79
950 2658 8.755696 TTGTGTTGATTGCTACCAAATATTTC 57.244 30.769 0.00 0.00 34.05 2.17
968 2676 2.765689 TCCCATCAACAACCCAAGTT 57.234 45.000 0.00 0.00 36.33 2.66
973 2681 3.128589 CCATCAACAACCCAAGTTATCGG 59.871 47.826 0.00 0.00 33.27 4.18
992 2700 2.755650 GGCATCCTAGTGTTGTATCGG 58.244 52.381 0.00 0.00 0.00 4.18
1002 2710 1.487142 TGTTGTATCGGGTGGGGTATG 59.513 52.381 0.00 0.00 0.00 2.39
1014 2722 1.910671 TGGGGTATGGACAAGTACACC 59.089 52.381 0.00 0.00 43.29 4.16
1024 2732 2.083774 ACAAGTACACCATTGGCATCG 58.916 47.619 1.54 0.00 0.00 3.84
1044 2752 1.550976 GTTGCACTAGCCCTACTGTCT 59.449 52.381 0.00 0.00 41.13 3.41
1056 2764 4.200874 CCCTACTGTCTCTACATCTCGTT 58.799 47.826 0.00 0.00 34.37 3.85
1061 2769 3.838120 TGTCTCTACATCTCGTTTGCTG 58.162 45.455 0.00 0.00 0.00 4.41
1114 2822 9.476202 GTTATGCAACCTTAATCTTTTTCAGTT 57.524 29.630 0.00 0.00 0.00 3.16
1115 2823 7.951530 ATGCAACCTTAATCTTTTTCAGTTG 57.048 32.000 0.00 0.00 37.12 3.16
1117 2825 6.769608 CAACCTTAATCTTTTTCAGTTGCC 57.230 37.500 0.00 0.00 0.00 4.52
1118 2826 5.468540 ACCTTAATCTTTTTCAGTTGCCC 57.531 39.130 0.00 0.00 0.00 5.36
1119 2827 5.147767 ACCTTAATCTTTTTCAGTTGCCCT 58.852 37.500 0.00 0.00 0.00 5.19
1120 2828 5.011023 ACCTTAATCTTTTTCAGTTGCCCTG 59.989 40.000 0.00 0.00 42.97 4.45
1121 2829 5.467035 TTAATCTTTTTCAGTTGCCCTGG 57.533 39.130 1.13 0.00 41.83 4.45
1122 2830 2.746279 TCTTTTTCAGTTGCCCTGGA 57.254 45.000 0.00 0.00 41.83 3.86
1123 2831 3.025322 TCTTTTTCAGTTGCCCTGGAA 57.975 42.857 0.00 0.00 41.83 3.53
1124 2832 2.958355 TCTTTTTCAGTTGCCCTGGAAG 59.042 45.455 0.00 4.20 39.86 3.46
1125 2833 2.452600 TTTTCAGTTGCCCTGGAAGT 57.547 45.000 0.00 0.00 39.86 3.01
1126 2834 3.586470 TTTTCAGTTGCCCTGGAAGTA 57.414 42.857 0.00 0.00 39.86 2.24
1127 2835 3.806949 TTTCAGTTGCCCTGGAAGTAT 57.193 42.857 0.00 0.00 41.83 2.12
1128 2836 4.919774 TTTCAGTTGCCCTGGAAGTATA 57.080 40.909 0.00 0.00 41.83 1.47
1129 2837 4.919774 TTCAGTTGCCCTGGAAGTATAA 57.080 40.909 0.00 0.00 41.83 0.98
1130 2838 4.487714 TCAGTTGCCCTGGAAGTATAAG 57.512 45.455 0.00 0.00 41.83 1.73
1141 2849 7.255766 GCCCTGGAAGTATAAGGTTAGTACTAC 60.256 44.444 0.91 0.00 0.00 2.73
1155 2863 9.813826 AGGTTAGTACTACAACTAGTAAAGGAA 57.186 33.333 0.91 0.00 37.24 3.36
1173 2881 6.553953 AAGGAAGCCTTTTTCTTTTGGTTA 57.446 33.333 0.00 0.00 41.69 2.85
1175 2883 7.136822 AGGAAGCCTTTTTCTTTTGGTTATT 57.863 32.000 0.00 0.00 0.00 1.40
1178 2886 8.682710 GGAAGCCTTTTTCTTTTGGTTATTTTT 58.317 29.630 0.00 0.00 0.00 1.94
1191 2899 7.630470 TTGGTTATTTTTAATCTGTTGTGCG 57.370 32.000 0.00 0.00 0.00 5.34
1209 2917 9.642327 TGTTGTGCGTTTATTTATTCTACTCTA 57.358 29.630 0.00 0.00 0.00 2.43
1260 2968 5.067153 TGTTCATTTGTTATTCCATAGGCCG 59.933 40.000 0.00 0.00 0.00 6.13
1276 2984 3.157727 CCGAATCATGGCTGACACA 57.842 52.632 0.00 0.00 33.22 3.72
1284 2992 1.114627 ATGGCTGACACAGATAGCGA 58.885 50.000 2.81 0.00 38.31 4.93
1293 3001 4.082245 TGACACAGATAGCGACAAGATCAA 60.082 41.667 0.00 0.00 0.00 2.57
1301 3009 4.946784 AGCGACAAGATCAATTTACCAC 57.053 40.909 0.00 0.00 0.00 4.16
1358 3066 0.391661 AAATCCTGATGCGTGCGTCT 60.392 50.000 14.57 0.00 33.41 4.18
1366 3074 1.289109 ATGCGTGCGTCTGTTGTACC 61.289 55.000 0.00 0.00 0.00 3.34
1367 3075 2.995450 GCGTGCGTCTGTTGTACCG 61.995 63.158 0.00 0.00 0.00 4.02
1376 3084 3.119743 CGTCTGTTGTACCGTAGATGGAA 60.120 47.826 0.00 0.00 0.00 3.53
1403 3111 3.079960 ACGTAACTATGGATGAGTGCG 57.920 47.619 0.00 0.00 34.40 5.34
1407 3115 4.497507 CGTAACTATGGATGAGTGCGAGAA 60.498 45.833 0.00 0.00 31.72 2.87
1418 3126 4.689071 TGAGTGCGAGAAAGAGTGTAAAA 58.311 39.130 0.00 0.00 0.00 1.52
1445 3153 9.823647 AAACGTCATCTTCAGAAGACATATTAT 57.176 29.630 15.41 0.00 41.36 1.28
1457 3165 6.425114 AGAAGACATATTATTGGCGATGACAC 59.575 38.462 0.00 0.00 0.00 3.67
1461 3169 0.106918 TTATTGGCGATGACACCCCC 60.107 55.000 0.00 0.00 0.00 5.40
1462 3170 0.986019 TATTGGCGATGACACCCCCT 60.986 55.000 0.00 0.00 0.00 4.79
1463 3171 2.270874 ATTGGCGATGACACCCCCTC 62.271 60.000 0.00 0.00 0.00 4.30
1464 3172 4.176752 GGCGATGACACCCCCTCC 62.177 72.222 0.00 0.00 0.00 4.30
1465 3173 3.083997 GCGATGACACCCCCTCCT 61.084 66.667 0.00 0.00 0.00 3.69
1466 3174 2.670148 GCGATGACACCCCCTCCTT 61.670 63.158 0.00 0.00 0.00 3.36
1467 3175 1.991230 CGATGACACCCCCTCCTTT 59.009 57.895 0.00 0.00 0.00 3.11
1468 3176 1.200519 CGATGACACCCCCTCCTTTA 58.799 55.000 0.00 0.00 0.00 1.85
1469 3177 1.768870 CGATGACACCCCCTCCTTTAT 59.231 52.381 0.00 0.00 0.00 1.40
1470 3178 2.224305 CGATGACACCCCCTCCTTTATC 60.224 54.545 0.00 0.00 0.00 1.75
1471 3179 2.661176 TGACACCCCCTCCTTTATCT 57.339 50.000 0.00 0.00 0.00 1.98
1472 3180 2.196595 TGACACCCCCTCCTTTATCTG 58.803 52.381 0.00 0.00 0.00 2.90
1494 3202 3.763897 GCTCCTTAATTTTCCAGCCTTGA 59.236 43.478 0.00 0.00 0.00 3.02
1527 3235 7.480760 AGCATATTTACTTGTCCCAACAAAT 57.519 32.000 0.00 0.00 44.53 2.32
1540 3248 6.048509 GTCCCAACAAATAAATAATGCCTGG 58.951 40.000 0.00 0.00 0.00 4.45
1542 3250 5.130145 CCCAACAAATAAATAATGCCTGGGA 59.870 40.000 0.00 0.00 40.48 4.37
1571 3279 6.363065 AGATCATCATTGCTGAGTATTTGGT 58.637 36.000 0.00 0.00 34.12 3.67
1585 3293 7.957002 TGAGTATTTGGTTTGGCAAAAGAATA 58.043 30.769 15.29 14.88 0.00 1.75
1622 3330 8.533657 AGAATTTATTTGCAATCATGTTCTCCA 58.466 29.630 0.00 0.00 0.00 3.86
1623 3331 8.483307 AATTTATTTGCAATCATGTTCTCCAC 57.517 30.769 0.00 0.00 0.00 4.02
1624 3332 6.587206 TTATTTGCAATCATGTTCTCCACA 57.413 33.333 0.00 0.00 40.71 4.17
1693 3401 5.684550 AGGAAAATAGAACAACCACGTTC 57.315 39.130 0.00 0.00 44.63 3.95
1706 3414 4.724074 ACCACGTTCGTCCAAATAGATA 57.276 40.909 0.00 0.00 0.00 1.98
1751 3459 8.682936 ATTTAGATATGAACAGCCGAGATTTT 57.317 30.769 0.00 0.00 0.00 1.82
1752 3460 7.715265 TTAGATATGAACAGCCGAGATTTTC 57.285 36.000 0.00 0.00 0.00 2.29
1753 3461 5.059833 AGATATGAACAGCCGAGATTTTCC 58.940 41.667 0.00 0.00 0.00 3.13
1754 3462 2.559698 TGAACAGCCGAGATTTTCCA 57.440 45.000 0.00 0.00 0.00 3.53
1755 3463 2.426522 TGAACAGCCGAGATTTTCCAG 58.573 47.619 0.00 0.00 0.00 3.86
1756 3464 2.224523 TGAACAGCCGAGATTTTCCAGT 60.225 45.455 0.00 0.00 0.00 4.00
1757 3465 2.568623 ACAGCCGAGATTTTCCAGTT 57.431 45.000 0.00 0.00 0.00 3.16
1758 3466 2.863809 ACAGCCGAGATTTTCCAGTTT 58.136 42.857 0.00 0.00 0.00 2.66
1759 3467 2.554032 ACAGCCGAGATTTTCCAGTTTG 59.446 45.455 0.00 0.00 0.00 2.93
1760 3468 2.095059 CAGCCGAGATTTTCCAGTTTGG 60.095 50.000 0.00 0.00 39.43 3.28
1761 3469 1.202348 GCCGAGATTTTCCAGTTTGGG 59.798 52.381 0.00 0.00 38.32 4.12
1762 3470 1.202348 CCGAGATTTTCCAGTTTGGGC 59.798 52.381 0.00 0.00 38.32 5.36
1763 3471 1.885887 CGAGATTTTCCAGTTTGGGCA 59.114 47.619 0.00 0.00 38.32 5.36
1764 3472 2.493278 CGAGATTTTCCAGTTTGGGCAT 59.507 45.455 0.00 0.00 38.32 4.40
1765 3473 3.674138 CGAGATTTTCCAGTTTGGGCATG 60.674 47.826 0.00 0.00 38.32 4.06
1766 3474 3.242011 AGATTTTCCAGTTTGGGCATGT 58.758 40.909 0.00 0.00 38.32 3.21
1767 3475 3.647590 AGATTTTCCAGTTTGGGCATGTT 59.352 39.130 0.00 0.00 38.32 2.71
1768 3476 3.922171 TTTTCCAGTTTGGGCATGTTT 57.078 38.095 0.00 0.00 38.32 2.83
1769 3477 2.906691 TTCCAGTTTGGGCATGTTTG 57.093 45.000 0.00 0.00 38.32 2.93
1770 3478 1.786937 TCCAGTTTGGGCATGTTTGT 58.213 45.000 0.00 0.00 38.32 2.83
1771 3479 2.950781 TCCAGTTTGGGCATGTTTGTA 58.049 42.857 0.00 0.00 38.32 2.41
1772 3480 2.890311 TCCAGTTTGGGCATGTTTGTAG 59.110 45.455 0.00 0.00 38.32 2.74
1773 3481 2.890311 CCAGTTTGGGCATGTTTGTAGA 59.110 45.455 0.00 0.00 32.67 2.59
1774 3482 3.320541 CCAGTTTGGGCATGTTTGTAGAA 59.679 43.478 0.00 0.00 32.67 2.10
1775 3483 4.549458 CAGTTTGGGCATGTTTGTAGAAG 58.451 43.478 0.00 0.00 0.00 2.85
1776 3484 3.573967 AGTTTGGGCATGTTTGTAGAAGG 59.426 43.478 0.00 0.00 0.00 3.46
1777 3485 2.214376 TGGGCATGTTTGTAGAAGGG 57.786 50.000 0.00 0.00 0.00 3.95
1778 3486 1.707989 TGGGCATGTTTGTAGAAGGGA 59.292 47.619 0.00 0.00 0.00 4.20
1779 3487 2.311542 TGGGCATGTTTGTAGAAGGGAT 59.688 45.455 0.00 0.00 0.00 3.85
1780 3488 3.525609 TGGGCATGTTTGTAGAAGGGATA 59.474 43.478 0.00 0.00 0.00 2.59
1781 3489 4.137543 GGGCATGTTTGTAGAAGGGATAG 58.862 47.826 0.00 0.00 0.00 2.08
1782 3490 4.141482 GGGCATGTTTGTAGAAGGGATAGA 60.141 45.833 0.00 0.00 0.00 1.98
1783 3491 5.059833 GGCATGTTTGTAGAAGGGATAGAG 58.940 45.833 0.00 0.00 0.00 2.43
1784 3492 5.163301 GGCATGTTTGTAGAAGGGATAGAGA 60.163 44.000 0.00 0.00 0.00 3.10
1785 3493 5.988561 GCATGTTTGTAGAAGGGATAGAGAG 59.011 44.000 0.00 0.00 0.00 3.20
1786 3494 6.520272 CATGTTTGTAGAAGGGATAGAGAGG 58.480 44.000 0.00 0.00 0.00 3.69
1787 3495 4.962995 TGTTTGTAGAAGGGATAGAGAGGG 59.037 45.833 0.00 0.00 0.00 4.30
1788 3496 5.209659 GTTTGTAGAAGGGATAGAGAGGGA 58.790 45.833 0.00 0.00 0.00 4.20
1789 3497 5.688220 TTGTAGAAGGGATAGAGAGGGAT 57.312 43.478 0.00 0.00 0.00 3.85
1790 3498 5.688220 TGTAGAAGGGATAGAGAGGGATT 57.312 43.478 0.00 0.00 0.00 3.01
1791 3499 5.398236 TGTAGAAGGGATAGAGAGGGATTG 58.602 45.833 0.00 0.00 0.00 2.67
1792 3500 3.868062 AGAAGGGATAGAGAGGGATTGG 58.132 50.000 0.00 0.00 0.00 3.16
1793 3501 2.037385 AGGGATAGAGAGGGATTGGC 57.963 55.000 0.00 0.00 0.00 4.52
1794 3502 0.610687 GGGATAGAGAGGGATTGGCG 59.389 60.000 0.00 0.00 0.00 5.69
1795 3503 0.610687 GGATAGAGAGGGATTGGCGG 59.389 60.000 0.00 0.00 0.00 6.13
1796 3504 1.633774 GATAGAGAGGGATTGGCGGA 58.366 55.000 0.00 0.00 0.00 5.54
1797 3505 1.971357 GATAGAGAGGGATTGGCGGAA 59.029 52.381 0.00 0.00 0.00 4.30
1798 3506 2.103153 TAGAGAGGGATTGGCGGAAT 57.897 50.000 0.00 0.00 0.00 3.01
1799 3507 0.761802 AGAGAGGGATTGGCGGAATC 59.238 55.000 0.00 0.00 40.00 2.52
1800 3508 0.601311 GAGAGGGATTGGCGGAATCG 60.601 60.000 2.07 0.00 41.45 3.34
1801 3509 1.048724 AGAGGGATTGGCGGAATCGA 61.049 55.000 0.00 0.00 41.45 3.59
1802 3510 0.035458 GAGGGATTGGCGGAATCGAT 59.965 55.000 0.00 0.00 41.45 3.59
1803 3511 0.250467 AGGGATTGGCGGAATCGATG 60.250 55.000 0.00 0.00 41.45 3.84
1804 3512 0.535102 GGGATTGGCGGAATCGATGT 60.535 55.000 0.00 0.00 41.45 3.06
1805 3513 1.308998 GGATTGGCGGAATCGATGTT 58.691 50.000 0.00 0.00 41.45 2.71
1806 3514 1.676006 GGATTGGCGGAATCGATGTTT 59.324 47.619 0.00 0.00 41.45 2.83
1807 3515 2.875933 GGATTGGCGGAATCGATGTTTA 59.124 45.455 0.00 0.00 41.45 2.01
1808 3516 3.502211 GGATTGGCGGAATCGATGTTTAT 59.498 43.478 0.00 0.00 41.45 1.40
1809 3517 4.023193 GGATTGGCGGAATCGATGTTTATT 60.023 41.667 0.00 0.00 41.45 1.40
1810 3518 3.961477 TGGCGGAATCGATGTTTATTG 57.039 42.857 0.00 0.00 39.00 1.90
1811 3519 3.536570 TGGCGGAATCGATGTTTATTGA 58.463 40.909 0.00 0.00 39.00 2.57
1812 3520 4.133820 TGGCGGAATCGATGTTTATTGAT 58.866 39.130 0.00 0.00 38.77 2.57
1813 3521 4.578516 TGGCGGAATCGATGTTTATTGATT 59.421 37.500 0.00 3.10 45.78 2.57
1814 3522 4.911610 GGCGGAATCGATGTTTATTGATTG 59.088 41.667 0.00 0.00 44.04 2.67
1815 3523 5.277779 GGCGGAATCGATGTTTATTGATTGA 60.278 40.000 0.00 0.00 44.04 2.57
1816 3524 5.848036 GCGGAATCGATGTTTATTGATTGAG 59.152 40.000 0.00 3.58 44.04 3.02
1817 3525 6.292865 GCGGAATCGATGTTTATTGATTGAGA 60.293 38.462 0.00 0.00 44.04 3.27
1818 3526 7.065894 CGGAATCGATGTTTATTGATTGAGAC 58.934 38.462 0.00 0.00 44.04 3.36
1819 3527 7.042456 CGGAATCGATGTTTATTGATTGAGACT 60.042 37.037 0.00 0.00 44.04 3.24
1820 3528 8.279103 GGAATCGATGTTTATTGATTGAGACTC 58.721 37.037 0.00 0.00 44.04 3.36
1821 3529 6.812481 TCGATGTTTATTGATTGAGACTCG 57.188 37.500 0.00 0.00 0.00 4.18
1822 3530 6.330278 TCGATGTTTATTGATTGAGACTCGT 58.670 36.000 0.00 0.00 0.00 4.18
1823 3531 6.253512 TCGATGTTTATTGATTGAGACTCGTG 59.746 38.462 0.00 0.00 0.00 4.35
1824 3532 6.508563 CGATGTTTATTGATTGAGACTCGTGG 60.509 42.308 0.00 0.00 0.00 4.94
1825 3533 5.789521 TGTTTATTGATTGAGACTCGTGGA 58.210 37.500 0.00 0.00 0.00 4.02
1826 3534 5.637810 TGTTTATTGATTGAGACTCGTGGAC 59.362 40.000 0.00 0.00 0.00 4.02
1827 3535 3.961480 ATTGATTGAGACTCGTGGACA 57.039 42.857 0.00 0.00 0.00 4.02
1828 3536 3.961480 TTGATTGAGACTCGTGGACAT 57.039 42.857 0.00 0.00 0.00 3.06
1829 3537 5.598416 ATTGATTGAGACTCGTGGACATA 57.402 39.130 0.00 0.00 0.00 2.29
1830 3538 4.639135 TGATTGAGACTCGTGGACATAG 57.361 45.455 0.00 0.00 0.00 2.23
1831 3539 3.381590 TGATTGAGACTCGTGGACATAGG 59.618 47.826 0.00 0.00 0.00 2.57
1832 3540 2.801077 TGAGACTCGTGGACATAGGA 57.199 50.000 0.00 0.00 0.00 2.94
1833 3541 2.644676 TGAGACTCGTGGACATAGGAG 58.355 52.381 0.00 0.00 38.26 3.69
1834 3542 2.026169 TGAGACTCGTGGACATAGGAGT 60.026 50.000 0.00 0.00 45.44 3.85
1835 3543 3.199289 TGAGACTCGTGGACATAGGAGTA 59.801 47.826 0.00 0.00 43.53 2.59
1836 3544 3.543665 AGACTCGTGGACATAGGAGTAC 58.456 50.000 0.00 0.00 43.53 2.73
1837 3545 3.054582 AGACTCGTGGACATAGGAGTACA 60.055 47.826 0.00 0.00 43.53 2.90
1838 3546 3.884091 GACTCGTGGACATAGGAGTACAT 59.116 47.826 0.00 0.00 43.53 2.29
1839 3547 3.632604 ACTCGTGGACATAGGAGTACATG 59.367 47.826 0.00 0.00 42.20 3.21
1840 3548 2.956333 TCGTGGACATAGGAGTACATGG 59.044 50.000 0.00 0.00 39.37 3.66
1841 3549 2.693591 CGTGGACATAGGAGTACATGGT 59.306 50.000 0.00 0.00 36.02 3.55
1842 3550 3.243434 CGTGGACATAGGAGTACATGGTC 60.243 52.174 0.00 0.00 36.02 4.02
1843 3551 3.704566 GTGGACATAGGAGTACATGGTCA 59.295 47.826 0.00 0.00 34.27 4.02
1844 3552 4.161565 GTGGACATAGGAGTACATGGTCAA 59.838 45.833 0.00 0.00 34.27 3.18
1845 3553 4.968719 TGGACATAGGAGTACATGGTCAAT 59.031 41.667 0.00 0.00 0.00 2.57
1846 3554 5.428457 TGGACATAGGAGTACATGGTCAATT 59.572 40.000 0.00 0.00 0.00 2.32
1847 3555 6.069673 TGGACATAGGAGTACATGGTCAATTT 60.070 38.462 0.00 0.00 0.00 1.82
1848 3556 6.260936 GGACATAGGAGTACATGGTCAATTTG 59.739 42.308 0.00 0.00 0.00 2.32
1849 3557 6.122277 ACATAGGAGTACATGGTCAATTTGG 58.878 40.000 0.00 0.00 0.00 3.28
1850 3558 4.927267 AGGAGTACATGGTCAATTTGGA 57.073 40.909 0.00 0.00 0.00 3.53
1851 3559 4.848357 AGGAGTACATGGTCAATTTGGAG 58.152 43.478 0.00 0.00 0.00 3.86
1852 3560 4.289672 AGGAGTACATGGTCAATTTGGAGT 59.710 41.667 0.00 0.00 0.00 3.85
1853 3561 5.487488 AGGAGTACATGGTCAATTTGGAGTA 59.513 40.000 0.00 0.00 0.00 2.59
1854 3562 5.585047 GGAGTACATGGTCAATTTGGAGTAC 59.415 44.000 0.00 0.00 0.00 2.73
1855 3563 6.121776 AGTACATGGTCAATTTGGAGTACA 57.878 37.500 0.00 0.00 34.58 2.90
1856 3564 6.539173 AGTACATGGTCAATTTGGAGTACAA 58.461 36.000 0.00 0.00 37.28 2.41
1857 3565 5.964958 ACATGGTCAATTTGGAGTACAAG 57.035 39.130 0.00 0.00 40.82 3.16
1858 3566 5.630121 ACATGGTCAATTTGGAGTACAAGA 58.370 37.500 0.00 0.00 40.82 3.02
1859 3567 6.248433 ACATGGTCAATTTGGAGTACAAGAT 58.752 36.000 0.00 0.00 40.82 2.40
1860 3568 7.402054 ACATGGTCAATTTGGAGTACAAGATA 58.598 34.615 0.00 0.00 40.82 1.98
1861 3569 7.888021 ACATGGTCAATTTGGAGTACAAGATAA 59.112 33.333 0.00 0.00 40.82 1.75
1862 3570 7.921786 TGGTCAATTTGGAGTACAAGATAAG 57.078 36.000 0.00 0.00 40.82 1.73
1863 3571 6.884295 TGGTCAATTTGGAGTACAAGATAAGG 59.116 38.462 0.00 0.00 40.82 2.69
1864 3572 6.183360 GGTCAATTTGGAGTACAAGATAAGGC 60.183 42.308 0.00 0.00 40.82 4.35
1865 3573 6.374333 GTCAATTTGGAGTACAAGATAAGGCA 59.626 38.462 0.00 0.00 40.82 4.75
1866 3574 6.599244 TCAATTTGGAGTACAAGATAAGGCAG 59.401 38.462 0.00 0.00 40.82 4.85
1867 3575 4.487714 TTGGAGTACAAGATAAGGCAGG 57.512 45.455 0.00 0.00 33.18 4.85
1868 3576 3.719871 TGGAGTACAAGATAAGGCAGGA 58.280 45.455 0.00 0.00 0.00 3.86
1869 3577 4.101114 TGGAGTACAAGATAAGGCAGGAA 58.899 43.478 0.00 0.00 0.00 3.36
1870 3578 4.081087 TGGAGTACAAGATAAGGCAGGAAC 60.081 45.833 0.00 0.00 0.00 3.62
1871 3579 4.081087 GGAGTACAAGATAAGGCAGGAACA 60.081 45.833 0.00 0.00 0.00 3.18
1872 3580 5.488341 GAGTACAAGATAAGGCAGGAACAA 58.512 41.667 0.00 0.00 0.00 2.83
1873 3581 5.876357 AGTACAAGATAAGGCAGGAACAAA 58.124 37.500 0.00 0.00 0.00 2.83
1874 3582 6.485171 AGTACAAGATAAGGCAGGAACAAAT 58.515 36.000 0.00 0.00 0.00 2.32
1875 3583 5.904362 ACAAGATAAGGCAGGAACAAATC 57.096 39.130 0.00 0.00 0.00 2.17
1892 3600 8.738645 GAACAAATCCAAGTCTATCCTACAAT 57.261 34.615 0.00 0.00 0.00 2.71
1893 3601 9.178758 GAACAAATCCAAGTCTATCCTACAATT 57.821 33.333 0.00 0.00 0.00 2.32
1894 3602 8.738645 ACAAATCCAAGTCTATCCTACAATTC 57.261 34.615 0.00 0.00 0.00 2.17
1895 3603 7.775561 ACAAATCCAAGTCTATCCTACAATTCC 59.224 37.037 0.00 0.00 0.00 3.01
1896 3604 7.698163 AATCCAAGTCTATCCTACAATTCCT 57.302 36.000 0.00 0.00 0.00 3.36
1897 3605 8.798975 AATCCAAGTCTATCCTACAATTCCTA 57.201 34.615 0.00 0.00 0.00 2.94
1898 3606 8.798975 ATCCAAGTCTATCCTACAATTCCTAA 57.201 34.615 0.00 0.00 0.00 2.69
1899 3607 8.798975 TCCAAGTCTATCCTACAATTCCTAAT 57.201 34.615 0.00 0.00 0.00 1.73
1900 3608 9.892444 TCCAAGTCTATCCTACAATTCCTAATA 57.108 33.333 0.00 0.00 0.00 0.98
1923 3631 6.529084 AATCATAATACTCAACATCCCCCA 57.471 37.500 0.00 0.00 0.00 4.96
1924 3632 6.725101 ATCATAATACTCAACATCCCCCAT 57.275 37.500 0.00 0.00 0.00 4.00
1925 3633 7.829224 ATCATAATACTCAACATCCCCCATA 57.171 36.000 0.00 0.00 0.00 2.74
1926 3634 7.257790 TCATAATACTCAACATCCCCCATAG 57.742 40.000 0.00 0.00 0.00 2.23
1927 3635 6.792473 TCATAATACTCAACATCCCCCATAGT 59.208 38.462 0.00 0.00 0.00 2.12
1928 3636 5.568620 AATACTCAACATCCCCCATAGTC 57.431 43.478 0.00 0.00 0.00 2.59
1929 3637 2.845659 ACTCAACATCCCCCATAGTCA 58.154 47.619 0.00 0.00 0.00 3.41
1930 3638 3.397527 ACTCAACATCCCCCATAGTCAT 58.602 45.455 0.00 0.00 0.00 3.06
1931 3639 4.566837 ACTCAACATCCCCCATAGTCATA 58.433 43.478 0.00 0.00 0.00 2.15
1932 3640 4.975147 ACTCAACATCCCCCATAGTCATAA 59.025 41.667 0.00 0.00 0.00 1.90
1933 3641 5.163195 ACTCAACATCCCCCATAGTCATAAC 60.163 44.000 0.00 0.00 0.00 1.89
1934 3642 4.104102 TCAACATCCCCCATAGTCATAACC 59.896 45.833 0.00 0.00 0.00 2.85
1935 3643 2.637872 ACATCCCCCATAGTCATAACCG 59.362 50.000 0.00 0.00 0.00 4.44
1936 3644 2.482414 TCCCCCATAGTCATAACCGT 57.518 50.000 0.00 0.00 0.00 4.83
1937 3645 3.616343 TCCCCCATAGTCATAACCGTA 57.384 47.619 0.00 0.00 0.00 4.02
1938 3646 3.503365 TCCCCCATAGTCATAACCGTAG 58.497 50.000 0.00 0.00 0.00 3.51
1939 3647 3.117016 TCCCCCATAGTCATAACCGTAGT 60.117 47.826 0.00 0.00 0.00 2.73
1940 3648 3.006537 CCCCCATAGTCATAACCGTAGTG 59.993 52.174 0.00 0.00 0.00 2.74
1941 3649 3.893200 CCCCATAGTCATAACCGTAGTGA 59.107 47.826 0.00 0.00 0.00 3.41
1942 3650 4.261909 CCCCATAGTCATAACCGTAGTGAC 60.262 50.000 7.72 7.72 41.88 3.67
1952 3660 3.947279 CGTAGTGACGCAAATGGTG 57.053 52.632 0.00 0.00 43.21 4.17
1953 3661 1.424403 CGTAGTGACGCAAATGGTGA 58.576 50.000 0.00 0.00 43.21 4.02
1954 3662 1.390123 CGTAGTGACGCAAATGGTGAG 59.610 52.381 0.00 0.00 43.21 3.51
1955 3663 2.683968 GTAGTGACGCAAATGGTGAGA 58.316 47.619 0.00 0.00 0.00 3.27
1956 3664 1.512926 AGTGACGCAAATGGTGAGAC 58.487 50.000 0.00 0.00 0.00 3.36
1957 3665 1.070758 AGTGACGCAAATGGTGAGACT 59.929 47.619 0.00 0.00 0.00 3.24
1958 3666 2.299013 AGTGACGCAAATGGTGAGACTA 59.701 45.455 0.00 0.00 0.00 2.59
1959 3667 2.668457 GTGACGCAAATGGTGAGACTAG 59.332 50.000 0.00 0.00 0.00 2.57
1960 3668 2.560981 TGACGCAAATGGTGAGACTAGA 59.439 45.455 0.00 0.00 0.00 2.43
1961 3669 3.182967 GACGCAAATGGTGAGACTAGAG 58.817 50.000 0.00 0.00 0.00 2.43
1962 3670 2.826128 ACGCAAATGGTGAGACTAGAGA 59.174 45.455 0.00 0.00 0.00 3.10
1963 3671 3.258372 ACGCAAATGGTGAGACTAGAGAA 59.742 43.478 0.00 0.00 0.00 2.87
1964 3672 3.862267 CGCAAATGGTGAGACTAGAGAAG 59.138 47.826 0.00 0.00 0.00 2.85
1965 3673 4.380973 CGCAAATGGTGAGACTAGAGAAGA 60.381 45.833 0.00 0.00 0.00 2.87
1966 3674 5.482908 GCAAATGGTGAGACTAGAGAAGAA 58.517 41.667 0.00 0.00 0.00 2.52
1967 3675 6.112058 GCAAATGGTGAGACTAGAGAAGAAT 58.888 40.000 0.00 0.00 0.00 2.40
1968 3676 6.257630 GCAAATGGTGAGACTAGAGAAGAATC 59.742 42.308 0.00 0.00 0.00 2.52
1969 3677 6.478512 AATGGTGAGACTAGAGAAGAATCC 57.521 41.667 0.00 0.00 0.00 3.01
1970 3678 3.948473 TGGTGAGACTAGAGAAGAATCCG 59.052 47.826 0.00 0.00 0.00 4.18
1971 3679 4.200874 GGTGAGACTAGAGAAGAATCCGA 58.799 47.826 0.00 0.00 0.00 4.55
1972 3680 4.641094 GGTGAGACTAGAGAAGAATCCGAA 59.359 45.833 0.00 0.00 0.00 4.30
1973 3681 5.220970 GGTGAGACTAGAGAAGAATCCGAAG 60.221 48.000 0.00 0.00 0.00 3.79
2311 4019 3.541191 GCATTGCGCAAGTTGTGG 58.459 55.556 28.62 13.49 41.79 4.17
2312 4020 1.007502 GCATTGCGCAAGTTGTGGA 60.008 52.632 28.62 12.58 41.79 4.02
2313 4021 0.388907 GCATTGCGCAAGTTGTGGAT 60.389 50.000 28.62 5.83 41.79 3.41
2314 4022 1.342555 CATTGCGCAAGTTGTGGATG 58.657 50.000 28.62 14.89 41.68 3.51
2315 4023 0.244450 ATTGCGCAAGTTGTGGATGG 59.756 50.000 28.62 0.00 41.68 3.51
2316 4024 0.821301 TTGCGCAAGTTGTGGATGGA 60.821 50.000 21.02 0.00 41.68 3.41
2317 4025 1.236616 TGCGCAAGTTGTGGATGGAG 61.237 55.000 8.16 0.00 41.68 3.86
2318 4026 1.237285 GCGCAAGTTGTGGATGGAGT 61.237 55.000 17.72 0.00 41.68 3.85
2319 4027 0.518636 CGCAAGTTGTGGATGGAGTG 59.481 55.000 8.61 0.00 0.00 3.51
2320 4028 0.883833 GCAAGTTGTGGATGGAGTGG 59.116 55.000 4.48 0.00 0.00 4.00
2321 4029 1.819305 GCAAGTTGTGGATGGAGTGGT 60.819 52.381 4.48 0.00 0.00 4.16
2322 4030 2.552155 GCAAGTTGTGGATGGAGTGGTA 60.552 50.000 4.48 0.00 0.00 3.25
2323 4031 3.750371 CAAGTTGTGGATGGAGTGGTAA 58.250 45.455 0.00 0.00 0.00 2.85
2324 4032 3.418684 AGTTGTGGATGGAGTGGTAAC 57.581 47.619 0.00 0.00 0.00 2.50
2325 4033 2.073816 GTTGTGGATGGAGTGGTAACG 58.926 52.381 0.00 0.00 42.51 3.18
2326 4034 0.611200 TGTGGATGGAGTGGTAACGG 59.389 55.000 0.00 0.00 42.51 4.44
2327 4035 0.899720 GTGGATGGAGTGGTAACGGA 59.100 55.000 0.00 0.00 42.51 4.69
2328 4036 0.899720 TGGATGGAGTGGTAACGGAC 59.100 55.000 0.00 0.00 42.51 4.79
2329 4037 0.179119 GGATGGAGTGGTAACGGACG 60.179 60.000 0.00 0.00 42.51 4.79
2330 4038 0.813184 GATGGAGTGGTAACGGACGA 59.187 55.000 0.00 0.00 42.51 4.20
2331 4039 0.815734 ATGGAGTGGTAACGGACGAG 59.184 55.000 0.00 0.00 42.51 4.18
2332 4040 1.246056 TGGAGTGGTAACGGACGAGG 61.246 60.000 0.00 0.00 42.51 4.63
2333 4041 1.246737 GGAGTGGTAACGGACGAGGT 61.247 60.000 0.00 0.00 42.51 3.85
2334 4042 0.600057 GAGTGGTAACGGACGAGGTT 59.400 55.000 0.00 0.00 42.51 3.50
2335 4043 0.316204 AGTGGTAACGGACGAGGTTG 59.684 55.000 0.00 0.00 42.51 3.77
2336 4044 1.005867 TGGTAACGGACGAGGTTGC 60.006 57.895 0.00 0.00 42.51 4.17
2337 4045 1.291272 GGTAACGGACGAGGTTGCT 59.709 57.895 0.00 0.00 31.73 3.91
2338 4046 0.735287 GGTAACGGACGAGGTTGCTC 60.735 60.000 0.00 0.00 31.73 4.26
2339 4047 0.038892 GTAACGGACGAGGTTGCTCA 60.039 55.000 0.00 0.00 0.00 4.26
2340 4048 0.675083 TAACGGACGAGGTTGCTCAA 59.325 50.000 0.00 0.00 0.00 3.02
2341 4049 0.600255 AACGGACGAGGTTGCTCAAG 60.600 55.000 0.00 0.00 0.00 3.02
2342 4050 2.383527 CGGACGAGGTTGCTCAAGC 61.384 63.158 3.81 3.81 42.50 4.01
2352 4060 3.490890 GCTCAAGCAAGGCGGTAG 58.509 61.111 0.00 0.00 41.59 3.18
2353 4061 2.754995 GCTCAAGCAAGGCGGTAGC 61.755 63.158 0.00 0.00 41.59 3.58
2363 4071 3.574780 GCGGTAGCCCTTTGTGTC 58.425 61.111 0.00 0.00 37.42 3.67
2364 4072 2.388232 GCGGTAGCCCTTTGTGTCG 61.388 63.158 0.00 0.00 37.42 4.35
2365 4073 1.290955 CGGTAGCCCTTTGTGTCGA 59.709 57.895 0.00 0.00 0.00 4.20
2366 4074 0.108329 CGGTAGCCCTTTGTGTCGAT 60.108 55.000 0.00 0.00 0.00 3.59
2367 4075 1.369625 GGTAGCCCTTTGTGTCGATG 58.630 55.000 0.00 0.00 0.00 3.84
2368 4076 1.338769 GGTAGCCCTTTGTGTCGATGT 60.339 52.381 0.00 0.00 0.00 3.06
2369 4077 2.093869 GGTAGCCCTTTGTGTCGATGTA 60.094 50.000 0.00 0.00 0.00 2.29
2370 4078 2.386661 AGCCCTTTGTGTCGATGTAG 57.613 50.000 0.00 0.00 0.00 2.74
2371 4079 0.727398 GCCCTTTGTGTCGATGTAGC 59.273 55.000 0.00 0.00 0.00 3.58
2372 4080 1.369625 CCCTTTGTGTCGATGTAGCC 58.630 55.000 0.00 0.00 0.00 3.93
2373 4081 0.999406 CCTTTGTGTCGATGTAGCCG 59.001 55.000 0.00 0.00 0.00 5.52
2374 4082 1.403647 CCTTTGTGTCGATGTAGCCGA 60.404 52.381 0.00 0.00 0.00 5.54
2375 4083 1.920574 CTTTGTGTCGATGTAGCCGAG 59.079 52.381 0.00 0.00 36.66 4.63
2376 4084 1.170442 TTGTGTCGATGTAGCCGAGA 58.830 50.000 0.00 0.00 36.66 4.04
2377 4085 0.733150 TGTGTCGATGTAGCCGAGAG 59.267 55.000 0.00 0.00 36.66 3.20
2378 4086 0.592754 GTGTCGATGTAGCCGAGAGC 60.593 60.000 0.00 0.00 44.25 4.09
2387 4095 2.336809 GCCGAGAGCATAGGGTCG 59.663 66.667 0.32 0.00 46.06 4.79
2388 4096 2.491022 GCCGAGAGCATAGGGTCGT 61.491 63.158 0.32 0.00 46.06 4.34
2389 4097 1.360551 CCGAGAGCATAGGGTCGTG 59.639 63.158 0.32 0.00 46.06 4.35
2390 4098 1.384989 CCGAGAGCATAGGGTCGTGT 61.385 60.000 0.32 0.00 46.06 4.49
2391 4099 1.306148 CGAGAGCATAGGGTCGTGTA 58.694 55.000 0.32 0.00 46.06 2.90
2392 4100 1.264557 CGAGAGCATAGGGTCGTGTAG 59.735 57.143 0.32 0.00 46.06 2.74
2393 4101 2.573369 GAGAGCATAGGGTCGTGTAGA 58.427 52.381 0.32 0.00 46.06 2.59
2401 4109 4.429561 GTCGTGTAGACGTGGTCG 57.570 61.111 12.54 0.00 46.20 4.79
2402 4110 1.862123 GTCGTGTAGACGTGGTCGA 59.138 57.895 12.54 0.00 46.20 4.20
2403 4111 0.445436 GTCGTGTAGACGTGGTCGAT 59.555 55.000 12.54 0.00 46.20 3.59
2404 4112 0.445043 TCGTGTAGACGTGGTCGATG 59.555 55.000 12.54 0.00 46.20 3.84
2405 4113 0.167470 CGTGTAGACGTGGTCGATGT 59.833 55.000 3.89 0.00 40.91 3.06
2406 4114 1.789410 CGTGTAGACGTGGTCGATGTC 60.789 57.143 3.89 0.00 40.91 3.06
2407 4115 0.445043 TGTAGACGTGGTCGATGTCG 59.555 55.000 0.00 0.00 44.34 4.35
2408 4116 0.723414 GTAGACGTGGTCGATGTCGA 59.277 55.000 0.00 0.21 44.34 4.20
2416 4124 4.736739 TCGATGTCGAGTCAGGGT 57.263 55.556 0.21 0.00 44.22 4.34
2417 4125 3.867549 TCGATGTCGAGTCAGGGTA 57.132 52.632 0.21 0.00 44.22 3.69
2418 4126 1.664873 TCGATGTCGAGTCAGGGTAG 58.335 55.000 0.21 0.00 44.22 3.18
2419 4127 0.029567 CGATGTCGAGTCAGGGTAGC 59.970 60.000 0.00 0.00 43.02 3.58
2420 4128 0.386113 GATGTCGAGTCAGGGTAGCC 59.614 60.000 1.60 1.60 0.00 3.93
2421 4129 1.384989 ATGTCGAGTCAGGGTAGCCG 61.385 60.000 5.06 0.71 0.00 5.52
2422 4130 2.439701 TCGAGTCAGGGTAGCCGG 60.440 66.667 5.06 4.80 0.00 6.13
2423 4131 2.754658 CGAGTCAGGGTAGCCGGT 60.755 66.667 10.97 0.00 0.00 5.28
2424 4132 2.893398 GAGTCAGGGTAGCCGGTG 59.107 66.667 10.97 2.40 0.00 4.94
2425 4133 1.982938 GAGTCAGGGTAGCCGGTGT 60.983 63.158 10.97 0.00 0.00 4.16
2426 4134 1.946475 GAGTCAGGGTAGCCGGTGTC 61.946 65.000 10.97 5.51 0.00 3.67
2427 4135 3.066190 TCAGGGTAGCCGGTGTCG 61.066 66.667 10.97 0.00 0.00 4.35
2428 4136 3.066190 CAGGGTAGCCGGTGTCGA 61.066 66.667 1.90 0.00 39.00 4.20
2429 4137 2.754658 AGGGTAGCCGGTGTCGAG 60.755 66.667 1.90 0.00 39.00 4.04
2430 4138 2.753043 GGGTAGCCGGTGTCGAGA 60.753 66.667 1.90 0.00 39.00 4.04
2431 4139 2.345760 GGGTAGCCGGTGTCGAGAA 61.346 63.158 1.90 0.00 39.00 2.87
2432 4140 1.588082 GGTAGCCGGTGTCGAGAAA 59.412 57.895 1.90 0.00 39.00 2.52
2433 4141 0.458025 GGTAGCCGGTGTCGAGAAAG 60.458 60.000 1.90 0.00 39.00 2.62
2434 4142 0.243095 GTAGCCGGTGTCGAGAAAGT 59.757 55.000 1.90 0.00 39.00 2.66
2435 4143 0.524862 TAGCCGGTGTCGAGAAAGTC 59.475 55.000 1.90 0.00 39.00 3.01
2443 4151 4.910956 CGAGAAAGTCGCCATGGA 57.089 55.556 18.40 0.00 43.03 3.41
2444 4152 2.670635 CGAGAAAGTCGCCATGGAG 58.329 57.895 18.40 13.80 43.03 3.86
2445 4153 1.424493 CGAGAAAGTCGCCATGGAGC 61.424 60.000 18.40 8.91 43.03 4.70
2446 4154 1.078143 AGAAAGTCGCCATGGAGCC 60.078 57.895 18.40 0.63 0.00 4.70
2447 4155 2.436646 AAAGTCGCCATGGAGCCG 60.437 61.111 18.40 10.19 0.00 5.52
2474 4182 2.508663 GGCGGTGCCGAGTTAGTC 60.509 66.667 15.45 0.00 39.62 2.59
2475 4183 2.260434 GCGGTGCCGAGTTAGTCA 59.740 61.111 15.45 0.00 42.83 3.41
2476 4184 1.153628 GCGGTGCCGAGTTAGTCAT 60.154 57.895 15.45 0.00 42.83 3.06
2477 4185 1.421410 GCGGTGCCGAGTTAGTCATG 61.421 60.000 15.45 0.00 42.83 3.07
2478 4186 0.806102 CGGTGCCGAGTTAGTCATGG 60.806 60.000 4.35 0.00 42.83 3.66
2479 4187 0.462047 GGTGCCGAGTTAGTCATGGG 60.462 60.000 0.00 0.00 0.00 4.00
2480 4188 1.090052 GTGCCGAGTTAGTCATGGGC 61.090 60.000 0.00 0.00 40.88 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 3.033764 GTGTCGTCGCCGCTTTCA 61.034 61.111 0.00 0.00 0.00 2.69
117 118 4.082523 CCACCACCCACGCGAGAT 62.083 66.667 15.93 0.00 0.00 2.75
521 1460 1.289160 AGCCTAATCTGTTCCCTGCA 58.711 50.000 0.00 0.00 0.00 4.41
526 1465 3.847671 AGCCTTAGCCTAATCTGTTCC 57.152 47.619 0.00 0.00 41.25 3.62
611 2319 8.299570 CAAACATTATTTTCTCTAAGTGCACCT 58.700 33.333 14.63 2.32 0.00 4.00
673 2381 9.326413 AGGTAATTAGGAAGATATTGTTTGTCG 57.674 33.333 0.00 0.00 0.00 4.35
705 2413 9.956720 CCAAAATTTGGTTGCAAAATAAATACA 57.043 25.926 16.24 0.00 45.93 2.29
773 2481 1.134280 CAAGGACATCCCCTAGCACAG 60.134 57.143 0.00 0.00 34.95 3.66
776 2484 1.965414 TTCAAGGACATCCCCTAGCA 58.035 50.000 0.00 0.00 34.95 3.49
785 2493 3.726557 TGAAGCCTCATTCAAGGACAT 57.273 42.857 0.00 0.00 38.87 3.06
841 2549 3.609853 TGATCCACTGCAGTAAACATCC 58.390 45.455 21.20 5.97 0.00 3.51
862 2570 6.327626 AGACATCCAGTGCTATAACTTACCAT 59.672 38.462 0.00 0.00 0.00 3.55
871 2579 5.449553 TGAGAGAAGACATCCAGTGCTATA 58.550 41.667 0.00 0.00 0.00 1.31
875 2583 3.456280 GATGAGAGAAGACATCCAGTGC 58.544 50.000 0.00 0.00 37.50 4.40
883 2591 4.474651 AGAGAGAGAGGATGAGAGAAGACA 59.525 45.833 0.00 0.00 0.00 3.41
884 2592 5.041191 AGAGAGAGAGGATGAGAGAAGAC 57.959 47.826 0.00 0.00 0.00 3.01
905 2613 6.433404 ACACAAGACACCCCTCGTATATATAG 59.567 42.308 0.00 0.00 0.00 1.31
911 2619 1.640917 ACACAAGACACCCCTCGTAT 58.359 50.000 0.00 0.00 0.00 3.06
920 2628 3.563808 TGGTAGCAATCAACACAAGACAC 59.436 43.478 0.00 0.00 0.00 3.67
950 2658 3.128589 CGATAACTTGGGTTGTTGATGGG 59.871 47.826 0.00 0.00 36.92 4.00
968 2676 4.082949 CGATACAACACTAGGATGCCGATA 60.083 45.833 0.00 0.00 0.00 2.92
973 2681 2.102588 ACCCGATACAACACTAGGATGC 59.897 50.000 0.00 0.00 0.00 3.91
992 2700 1.910671 TGTACTTGTCCATACCCCACC 59.089 52.381 0.00 0.00 0.00 4.61
1002 2710 1.904287 TGCCAATGGTGTACTTGTCC 58.096 50.000 0.00 0.00 0.00 4.02
1024 2732 1.550976 AGACAGTAGGGCTAGTGCAAC 59.449 52.381 0.00 0.00 39.49 4.17
1031 2739 4.503469 CGAGATGTAGAGACAGTAGGGCTA 60.503 50.000 0.00 0.00 39.50 3.93
1044 2752 2.029020 AGCACAGCAAACGAGATGTAGA 60.029 45.455 0.00 0.00 35.69 2.59
1056 2764 3.333029 TGAGCAATAGTAGCACAGCAA 57.667 42.857 0.00 0.00 0.00 3.91
1061 2769 6.291849 CGACTTACATTGAGCAATAGTAGCAC 60.292 42.308 0.00 0.00 0.00 4.40
1114 2822 4.368067 ACTAACCTTATACTTCCAGGGCA 58.632 43.478 0.00 0.00 31.19 5.36
1115 2823 5.601729 AGTACTAACCTTATACTTCCAGGGC 59.398 44.000 0.00 0.00 31.19 5.19
1116 2824 7.781693 TGTAGTACTAACCTTATACTTCCAGGG 59.218 40.741 3.61 0.00 31.65 4.45
1117 2825 8.757982 TGTAGTACTAACCTTATACTTCCAGG 57.242 38.462 3.61 0.00 31.65 4.45
1119 2827 9.759473 AGTTGTAGTACTAACCTTATACTTCCA 57.241 33.333 3.61 0.00 31.65 3.53
1128 2836 9.813826 TCCTTTACTAGTTGTAGTACTAACCTT 57.186 33.333 3.61 0.00 40.76 3.50
1129 2837 9.813826 TTCCTTTACTAGTTGTAGTACTAACCT 57.186 33.333 3.61 3.58 40.76 3.50
1260 2968 3.497640 GCTATCTGTGTCAGCCATGATTC 59.502 47.826 0.00 0.00 37.87 2.52
1276 2984 6.480320 GTGGTAAATTGATCTTGTCGCTATCT 59.520 38.462 0.00 0.00 0.00 1.98
1284 2992 4.160252 GCCCATGTGGTAAATTGATCTTGT 59.840 41.667 0.00 0.00 36.04 3.16
1328 3036 3.852205 GCATCAGGATTTGTGCATCGATG 60.852 47.826 21.27 21.27 35.36 3.84
1329 3037 2.292569 GCATCAGGATTTGTGCATCGAT 59.707 45.455 0.00 0.00 35.36 3.59
1332 3040 1.402968 ACGCATCAGGATTTGTGCATC 59.597 47.619 0.00 0.00 35.14 3.91
1339 3047 0.391661 AGACGCACGCATCAGGATTT 60.392 50.000 0.00 0.00 0.00 2.17
1348 3056 1.952133 GGTACAACAGACGCACGCA 60.952 57.895 0.00 0.00 0.00 5.24
1358 3066 5.069914 AGCATATTCCATCTACGGTACAACA 59.930 40.000 0.00 0.00 0.00 3.33
1367 3075 9.504710 CATAGTTACGTAGCATATTCCATCTAC 57.495 37.037 12.18 0.00 0.00 2.59
1376 3084 7.539436 CACTCATCCATAGTTACGTAGCATAT 58.461 38.462 12.18 4.32 0.00 1.78
1418 3126 8.553459 AATATGTCTTCTGAAGATGACGTTTT 57.447 30.769 21.86 16.58 46.23 2.43
1445 3153 2.933287 AGGGGGTGTCATCGCCAA 60.933 61.111 20.50 0.00 45.25 4.52
1457 3165 0.767998 GGAGCAGATAAAGGAGGGGG 59.232 60.000 0.00 0.00 0.00 5.40
1461 3169 7.557719 TGGAAAATTAAGGAGCAGATAAAGGAG 59.442 37.037 0.00 0.00 0.00 3.69
1462 3170 7.410174 TGGAAAATTAAGGAGCAGATAAAGGA 58.590 34.615 0.00 0.00 0.00 3.36
1463 3171 7.645058 TGGAAAATTAAGGAGCAGATAAAGG 57.355 36.000 0.00 0.00 0.00 3.11
1464 3172 7.199078 GCTGGAAAATTAAGGAGCAGATAAAG 58.801 38.462 0.00 0.00 0.00 1.85
1465 3173 6.096846 GGCTGGAAAATTAAGGAGCAGATAAA 59.903 38.462 0.00 0.00 0.00 1.40
1466 3174 5.594317 GGCTGGAAAATTAAGGAGCAGATAA 59.406 40.000 0.00 0.00 0.00 1.75
1467 3175 5.103940 AGGCTGGAAAATTAAGGAGCAGATA 60.104 40.000 0.00 0.00 0.00 1.98
1468 3176 3.956848 GGCTGGAAAATTAAGGAGCAGAT 59.043 43.478 0.00 0.00 0.00 2.90
1469 3177 3.010584 AGGCTGGAAAATTAAGGAGCAGA 59.989 43.478 0.00 0.00 0.00 4.26
1470 3178 3.359950 AGGCTGGAAAATTAAGGAGCAG 58.640 45.455 0.00 0.00 0.00 4.24
1471 3179 3.456380 AGGCTGGAAAATTAAGGAGCA 57.544 42.857 0.00 0.00 0.00 4.26
1472 3180 3.763897 TCAAGGCTGGAAAATTAAGGAGC 59.236 43.478 0.00 0.00 0.00 4.70
1527 3235 9.827198 ATGATCTTATTTCCCAGGCATTATTTA 57.173 29.630 0.00 0.00 0.00 1.40
1540 3248 7.507733 ACTCAGCAATGATGATCTTATTTCC 57.492 36.000 0.29 0.00 0.00 3.13
1614 3322 9.987726 ATAGATAGATAGATCATGTGGAGAACA 57.012 33.333 0.00 0.00 44.79 3.18
1662 3370 9.362151 TGGTTGTTCTATTTTCCTTCTGTATTT 57.638 29.630 0.00 0.00 0.00 1.40
1668 3376 5.374071 ACGTGGTTGTTCTATTTTCCTTCT 58.626 37.500 0.00 0.00 0.00 2.85
1671 3379 4.212636 CGAACGTGGTTGTTCTATTTTCCT 59.787 41.667 0.00 0.00 44.76 3.36
1678 3386 1.408340 TGGACGAACGTGGTTGTTCTA 59.592 47.619 4.19 0.00 44.76 2.10
1726 3434 8.682936 AAAATCTCGGCTGTTCATATCTAAAT 57.317 30.769 0.00 0.00 0.00 1.40
1740 3448 2.162681 CCAAACTGGAAAATCTCGGCT 58.837 47.619 0.00 0.00 40.96 5.52
1743 3451 1.885887 TGCCCAAACTGGAAAATCTCG 59.114 47.619 0.00 0.00 40.96 4.04
1751 3459 1.786937 ACAAACATGCCCAAACTGGA 58.213 45.000 0.00 0.00 40.96 3.86
1752 3460 2.890311 TCTACAAACATGCCCAAACTGG 59.110 45.455 0.00 0.00 37.25 4.00
1753 3461 4.549458 CTTCTACAAACATGCCCAAACTG 58.451 43.478 0.00 0.00 0.00 3.16
1754 3462 3.573967 CCTTCTACAAACATGCCCAAACT 59.426 43.478 0.00 0.00 0.00 2.66
1755 3463 3.306019 CCCTTCTACAAACATGCCCAAAC 60.306 47.826 0.00 0.00 0.00 2.93
1756 3464 2.896685 CCCTTCTACAAACATGCCCAAA 59.103 45.455 0.00 0.00 0.00 3.28
1757 3465 2.109128 TCCCTTCTACAAACATGCCCAA 59.891 45.455 0.00 0.00 0.00 4.12
1758 3466 1.707989 TCCCTTCTACAAACATGCCCA 59.292 47.619 0.00 0.00 0.00 5.36
1759 3467 2.507407 TCCCTTCTACAAACATGCCC 57.493 50.000 0.00 0.00 0.00 5.36
1760 3468 5.036117 TCTATCCCTTCTACAAACATGCC 57.964 43.478 0.00 0.00 0.00 4.40
1761 3469 5.918608 TCTCTATCCCTTCTACAAACATGC 58.081 41.667 0.00 0.00 0.00 4.06
1762 3470 6.463614 CCCTCTCTATCCCTTCTACAAACATG 60.464 46.154 0.00 0.00 0.00 3.21
1763 3471 5.604650 CCCTCTCTATCCCTTCTACAAACAT 59.395 44.000 0.00 0.00 0.00 2.71
1764 3472 4.962995 CCCTCTCTATCCCTTCTACAAACA 59.037 45.833 0.00 0.00 0.00 2.83
1765 3473 5.209659 TCCCTCTCTATCCCTTCTACAAAC 58.790 45.833 0.00 0.00 0.00 2.93
1766 3474 5.483174 TCCCTCTCTATCCCTTCTACAAA 57.517 43.478 0.00 0.00 0.00 2.83
1767 3475 5.688220 ATCCCTCTCTATCCCTTCTACAA 57.312 43.478 0.00 0.00 0.00 2.41
1768 3476 5.398236 CAATCCCTCTCTATCCCTTCTACA 58.602 45.833 0.00 0.00 0.00 2.74
1769 3477 4.775253 CCAATCCCTCTCTATCCCTTCTAC 59.225 50.000 0.00 0.00 0.00 2.59
1770 3478 4.757645 GCCAATCCCTCTCTATCCCTTCTA 60.758 50.000 0.00 0.00 0.00 2.10
1771 3479 3.868062 CCAATCCCTCTCTATCCCTTCT 58.132 50.000 0.00 0.00 0.00 2.85
1772 3480 2.304470 GCCAATCCCTCTCTATCCCTTC 59.696 54.545 0.00 0.00 0.00 3.46
1773 3481 2.343625 GCCAATCCCTCTCTATCCCTT 58.656 52.381 0.00 0.00 0.00 3.95
1774 3482 1.829261 CGCCAATCCCTCTCTATCCCT 60.829 57.143 0.00 0.00 0.00 4.20
1775 3483 0.610687 CGCCAATCCCTCTCTATCCC 59.389 60.000 0.00 0.00 0.00 3.85
1776 3484 0.610687 CCGCCAATCCCTCTCTATCC 59.389 60.000 0.00 0.00 0.00 2.59
1777 3485 1.633774 TCCGCCAATCCCTCTCTATC 58.366 55.000 0.00 0.00 0.00 2.08
1778 3486 2.103153 TTCCGCCAATCCCTCTCTAT 57.897 50.000 0.00 0.00 0.00 1.98
1779 3487 1.971357 GATTCCGCCAATCCCTCTCTA 59.029 52.381 0.00 0.00 35.66 2.43
1780 3488 0.761802 GATTCCGCCAATCCCTCTCT 59.238 55.000 0.00 0.00 35.66 3.10
1781 3489 0.601311 CGATTCCGCCAATCCCTCTC 60.601 60.000 1.01 0.00 38.17 3.20
1782 3490 1.048724 TCGATTCCGCCAATCCCTCT 61.049 55.000 0.00 0.00 38.17 3.69
1783 3491 0.035458 ATCGATTCCGCCAATCCCTC 59.965 55.000 0.00 0.00 38.17 4.30
1784 3492 0.250467 CATCGATTCCGCCAATCCCT 60.250 55.000 0.00 0.00 38.17 4.20
1785 3493 0.535102 ACATCGATTCCGCCAATCCC 60.535 55.000 0.00 0.00 38.17 3.85
1786 3494 1.308998 AACATCGATTCCGCCAATCC 58.691 50.000 0.00 0.00 38.17 3.01
1787 3495 4.749245 ATAAACATCGATTCCGCCAATC 57.251 40.909 0.00 0.00 38.06 2.67
1788 3496 4.578516 TCAATAAACATCGATTCCGCCAAT 59.421 37.500 0.00 0.00 35.37 3.16
1789 3497 3.942115 TCAATAAACATCGATTCCGCCAA 59.058 39.130 0.00 0.00 35.37 4.52
1790 3498 3.536570 TCAATAAACATCGATTCCGCCA 58.463 40.909 0.00 0.00 35.37 5.69
1791 3499 4.749245 ATCAATAAACATCGATTCCGCC 57.251 40.909 0.00 0.00 35.37 6.13
1792 3500 5.747565 TCAATCAATAAACATCGATTCCGC 58.252 37.500 0.00 0.00 35.37 5.54
1793 3501 7.042456 AGTCTCAATCAATAAACATCGATTCCG 60.042 37.037 0.00 0.00 37.07 4.30
1794 3502 8.147642 AGTCTCAATCAATAAACATCGATTCC 57.852 34.615 0.00 0.00 0.00 3.01
1795 3503 8.000991 CGAGTCTCAATCAATAAACATCGATTC 58.999 37.037 0.00 0.00 0.00 2.52
1796 3504 7.492669 ACGAGTCTCAATCAATAAACATCGATT 59.507 33.333 0.00 0.00 0.00 3.34
1797 3505 6.980978 ACGAGTCTCAATCAATAAACATCGAT 59.019 34.615 0.00 0.00 0.00 3.59
1798 3506 6.253512 CACGAGTCTCAATCAATAAACATCGA 59.746 38.462 0.00 0.00 0.00 3.59
1799 3507 6.406018 CACGAGTCTCAATCAATAAACATCG 58.594 40.000 0.00 0.00 0.00 3.84
1800 3508 6.535150 TCCACGAGTCTCAATCAATAAACATC 59.465 38.462 0.00 0.00 0.00 3.06
1801 3509 6.313905 GTCCACGAGTCTCAATCAATAAACAT 59.686 38.462 0.00 0.00 0.00 2.71
1802 3510 5.637810 GTCCACGAGTCTCAATCAATAAACA 59.362 40.000 0.00 0.00 0.00 2.83
1803 3511 5.637810 TGTCCACGAGTCTCAATCAATAAAC 59.362 40.000 0.00 0.00 0.00 2.01
1804 3512 5.789521 TGTCCACGAGTCTCAATCAATAAA 58.210 37.500 0.00 0.00 0.00 1.40
1805 3513 5.400066 TGTCCACGAGTCTCAATCAATAA 57.600 39.130 0.00 0.00 0.00 1.40
1806 3514 5.598416 ATGTCCACGAGTCTCAATCAATA 57.402 39.130 0.00 0.00 0.00 1.90
1807 3515 3.961480 TGTCCACGAGTCTCAATCAAT 57.039 42.857 0.00 0.00 0.00 2.57
1808 3516 3.961480 ATGTCCACGAGTCTCAATCAA 57.039 42.857 0.00 0.00 0.00 2.57
1809 3517 3.381590 CCTATGTCCACGAGTCTCAATCA 59.618 47.826 0.00 0.00 0.00 2.57
1810 3518 3.632604 TCCTATGTCCACGAGTCTCAATC 59.367 47.826 0.00 0.00 0.00 2.67
1811 3519 3.632333 TCCTATGTCCACGAGTCTCAAT 58.368 45.455 0.00 0.00 0.00 2.57
1812 3520 3.017442 CTCCTATGTCCACGAGTCTCAA 58.983 50.000 0.00 0.00 0.00 3.02
1813 3521 2.026169 ACTCCTATGTCCACGAGTCTCA 60.026 50.000 0.00 0.00 29.62 3.27
1814 3522 2.645802 ACTCCTATGTCCACGAGTCTC 58.354 52.381 0.00 0.00 29.62 3.36
1815 3523 2.810870 ACTCCTATGTCCACGAGTCT 57.189 50.000 0.00 0.00 29.62 3.24
1816 3524 3.276857 TGTACTCCTATGTCCACGAGTC 58.723 50.000 0.00 0.00 36.91 3.36
1817 3525 3.361281 TGTACTCCTATGTCCACGAGT 57.639 47.619 0.00 0.00 38.97 4.18
1818 3526 3.004839 CCATGTACTCCTATGTCCACGAG 59.995 52.174 0.00 0.00 0.00 4.18
1819 3527 2.956333 CCATGTACTCCTATGTCCACGA 59.044 50.000 0.00 0.00 0.00 4.35
1820 3528 2.693591 ACCATGTACTCCTATGTCCACG 59.306 50.000 0.00 0.00 0.00 4.94
1821 3529 3.704566 TGACCATGTACTCCTATGTCCAC 59.295 47.826 0.00 0.00 0.00 4.02
1822 3530 3.989056 TGACCATGTACTCCTATGTCCA 58.011 45.455 0.00 0.00 0.00 4.02
1823 3531 5.552870 ATTGACCATGTACTCCTATGTCC 57.447 43.478 0.00 0.00 0.00 4.02
1824 3532 6.260936 CCAAATTGACCATGTACTCCTATGTC 59.739 42.308 0.00 0.00 0.00 3.06
1825 3533 6.069673 TCCAAATTGACCATGTACTCCTATGT 60.070 38.462 0.00 0.00 0.00 2.29
1826 3534 6.356556 TCCAAATTGACCATGTACTCCTATG 58.643 40.000 0.00 0.00 0.00 2.23
1827 3535 6.158695 ACTCCAAATTGACCATGTACTCCTAT 59.841 38.462 0.00 0.00 0.00 2.57
1828 3536 5.487488 ACTCCAAATTGACCATGTACTCCTA 59.513 40.000 0.00 0.00 0.00 2.94
1829 3537 4.289672 ACTCCAAATTGACCATGTACTCCT 59.710 41.667 0.00 0.00 0.00 3.69
1830 3538 4.589908 ACTCCAAATTGACCATGTACTCC 58.410 43.478 0.00 0.00 0.00 3.85
1831 3539 6.170506 TGTACTCCAAATTGACCATGTACTC 58.829 40.000 0.00 0.00 32.76 2.59
1832 3540 6.121776 TGTACTCCAAATTGACCATGTACT 57.878 37.500 0.00 0.00 32.76 2.73
1833 3541 6.653320 TCTTGTACTCCAAATTGACCATGTAC 59.347 38.462 0.00 0.00 31.20 2.90
1834 3542 6.774673 TCTTGTACTCCAAATTGACCATGTA 58.225 36.000 0.00 0.00 31.20 2.29
1835 3543 5.630121 TCTTGTACTCCAAATTGACCATGT 58.370 37.500 0.00 0.00 31.20 3.21
1836 3544 6.764308 ATCTTGTACTCCAAATTGACCATG 57.236 37.500 0.00 0.00 31.20 3.66
1837 3545 7.557719 CCTTATCTTGTACTCCAAATTGACCAT 59.442 37.037 0.00 0.00 31.20 3.55
1838 3546 6.884295 CCTTATCTTGTACTCCAAATTGACCA 59.116 38.462 0.00 0.00 31.20 4.02
1839 3547 6.183360 GCCTTATCTTGTACTCCAAATTGACC 60.183 42.308 0.00 0.00 31.20 4.02
1840 3548 6.374333 TGCCTTATCTTGTACTCCAAATTGAC 59.626 38.462 0.00 0.00 31.20 3.18
1841 3549 6.480763 TGCCTTATCTTGTACTCCAAATTGA 58.519 36.000 0.00 0.00 31.20 2.57
1842 3550 6.183360 CCTGCCTTATCTTGTACTCCAAATTG 60.183 42.308 0.00 0.00 31.20 2.32
1843 3551 5.888161 CCTGCCTTATCTTGTACTCCAAATT 59.112 40.000 0.00 0.00 31.20 1.82
1844 3552 5.191722 TCCTGCCTTATCTTGTACTCCAAAT 59.808 40.000 0.00 0.00 31.20 2.32
1845 3553 4.534500 TCCTGCCTTATCTTGTACTCCAAA 59.466 41.667 0.00 0.00 31.20 3.28
1846 3554 4.101114 TCCTGCCTTATCTTGTACTCCAA 58.899 43.478 0.00 0.00 0.00 3.53
1847 3555 3.719871 TCCTGCCTTATCTTGTACTCCA 58.280 45.455 0.00 0.00 0.00 3.86
1848 3556 4.081087 TGTTCCTGCCTTATCTTGTACTCC 60.081 45.833 0.00 0.00 0.00 3.85
1849 3557 5.086104 TGTTCCTGCCTTATCTTGTACTC 57.914 43.478 0.00 0.00 0.00 2.59
1850 3558 5.499004 TTGTTCCTGCCTTATCTTGTACT 57.501 39.130 0.00 0.00 0.00 2.73
1851 3559 6.183360 GGATTTGTTCCTGCCTTATCTTGTAC 60.183 42.308 0.00 0.00 41.78 2.90
1852 3560 5.885912 GGATTTGTTCCTGCCTTATCTTGTA 59.114 40.000 0.00 0.00 41.78 2.41
1853 3561 4.706962 GGATTTGTTCCTGCCTTATCTTGT 59.293 41.667 0.00 0.00 41.78 3.16
1854 3562 4.706476 TGGATTTGTTCCTGCCTTATCTTG 59.294 41.667 0.00 0.00 45.68 3.02
1855 3563 4.934356 TGGATTTGTTCCTGCCTTATCTT 58.066 39.130 0.00 0.00 45.68 2.40
1856 3564 4.591321 TGGATTTGTTCCTGCCTTATCT 57.409 40.909 0.00 0.00 45.68 1.98
1857 3565 4.706962 ACTTGGATTTGTTCCTGCCTTATC 59.293 41.667 0.00 0.00 45.68 1.75
1858 3566 4.677182 ACTTGGATTTGTTCCTGCCTTAT 58.323 39.130 0.00 0.00 45.68 1.73
1859 3567 4.079253 GACTTGGATTTGTTCCTGCCTTA 58.921 43.478 0.00 0.00 45.68 2.69
1860 3568 2.893489 GACTTGGATTTGTTCCTGCCTT 59.107 45.455 0.00 0.00 45.68 4.35
1861 3569 2.108952 AGACTTGGATTTGTTCCTGCCT 59.891 45.455 0.00 0.00 45.68 4.75
1862 3570 2.519013 AGACTTGGATTTGTTCCTGCC 58.481 47.619 0.00 0.00 45.68 4.85
1863 3571 4.336713 GGATAGACTTGGATTTGTTCCTGC 59.663 45.833 0.00 0.00 45.68 4.85
1864 3572 5.749462 AGGATAGACTTGGATTTGTTCCTG 58.251 41.667 0.00 0.00 45.68 3.86
1865 3573 6.443849 TGTAGGATAGACTTGGATTTGTTCCT 59.556 38.462 0.00 0.00 45.68 3.36
1866 3574 6.650120 TGTAGGATAGACTTGGATTTGTTCC 58.350 40.000 0.00 0.00 45.69 3.62
1867 3575 8.738645 ATTGTAGGATAGACTTGGATTTGTTC 57.261 34.615 0.00 0.00 0.00 3.18
1868 3576 9.178758 GAATTGTAGGATAGACTTGGATTTGTT 57.821 33.333 0.00 0.00 0.00 2.83
1869 3577 7.775561 GGAATTGTAGGATAGACTTGGATTTGT 59.224 37.037 0.00 0.00 0.00 2.83
1870 3578 7.995488 AGGAATTGTAGGATAGACTTGGATTTG 59.005 37.037 0.00 0.00 0.00 2.32
1871 3579 8.107196 AGGAATTGTAGGATAGACTTGGATTT 57.893 34.615 0.00 0.00 0.00 2.17
1872 3580 7.698163 AGGAATTGTAGGATAGACTTGGATT 57.302 36.000 0.00 0.00 0.00 3.01
1873 3581 8.798975 TTAGGAATTGTAGGATAGACTTGGAT 57.201 34.615 0.00 0.00 0.00 3.41
1874 3582 8.798975 ATTAGGAATTGTAGGATAGACTTGGA 57.201 34.615 0.00 0.00 0.00 3.53
1897 3605 8.677871 TGGGGGATGTTGAGTATTATGATTATT 58.322 33.333 0.00 0.00 0.00 1.40
1898 3606 8.230848 TGGGGGATGTTGAGTATTATGATTAT 57.769 34.615 0.00 0.00 0.00 1.28
1899 3607 7.640577 TGGGGGATGTTGAGTATTATGATTA 57.359 36.000 0.00 0.00 0.00 1.75
1900 3608 6.529084 TGGGGGATGTTGAGTATTATGATT 57.471 37.500 0.00 0.00 0.00 2.57
1901 3609 6.725101 ATGGGGGATGTTGAGTATTATGAT 57.275 37.500 0.00 0.00 0.00 2.45
1902 3610 6.792473 ACTATGGGGGATGTTGAGTATTATGA 59.208 38.462 0.00 0.00 0.00 2.15
1903 3611 7.020827 ACTATGGGGGATGTTGAGTATTATG 57.979 40.000 0.00 0.00 0.00 1.90
1904 3612 6.792473 TGACTATGGGGGATGTTGAGTATTAT 59.208 38.462 0.00 0.00 0.00 1.28
1905 3613 6.147473 TGACTATGGGGGATGTTGAGTATTA 58.853 40.000 0.00 0.00 0.00 0.98
1906 3614 4.975147 TGACTATGGGGGATGTTGAGTATT 59.025 41.667 0.00 0.00 0.00 1.89
1907 3615 4.566837 TGACTATGGGGGATGTTGAGTAT 58.433 43.478 0.00 0.00 0.00 2.12
1908 3616 4.002256 TGACTATGGGGGATGTTGAGTA 57.998 45.455 0.00 0.00 0.00 2.59
1909 3617 2.845659 TGACTATGGGGGATGTTGAGT 58.154 47.619 0.00 0.00 0.00 3.41
1910 3618 5.308825 GTTATGACTATGGGGGATGTTGAG 58.691 45.833 0.00 0.00 0.00 3.02
1911 3619 4.104102 GGTTATGACTATGGGGGATGTTGA 59.896 45.833 0.00 0.00 0.00 3.18
1912 3620 4.398319 GGTTATGACTATGGGGGATGTTG 58.602 47.826 0.00 0.00 0.00 3.33
1913 3621 3.072476 CGGTTATGACTATGGGGGATGTT 59.928 47.826 0.00 0.00 0.00 2.71
1914 3622 2.637872 CGGTTATGACTATGGGGGATGT 59.362 50.000 0.00 0.00 0.00 3.06
1915 3623 2.637872 ACGGTTATGACTATGGGGGATG 59.362 50.000 0.00 0.00 0.00 3.51
1916 3624 2.986050 ACGGTTATGACTATGGGGGAT 58.014 47.619 0.00 0.00 0.00 3.85
1917 3625 2.482414 ACGGTTATGACTATGGGGGA 57.518 50.000 0.00 0.00 0.00 4.81
1918 3626 3.006537 CACTACGGTTATGACTATGGGGG 59.993 52.174 0.00 0.00 0.00 5.40
1919 3627 3.893200 TCACTACGGTTATGACTATGGGG 59.107 47.826 0.00 0.00 0.00 4.96
1920 3628 4.556104 CGTCACTACGGTTATGACTATGGG 60.556 50.000 17.24 3.74 45.50 4.00
1921 3629 4.534168 CGTCACTACGGTTATGACTATGG 58.466 47.826 17.24 4.00 45.50 2.74
1935 3643 2.412089 GTCTCACCATTTGCGTCACTAC 59.588 50.000 0.00 0.00 0.00 2.73
1936 3644 2.299013 AGTCTCACCATTTGCGTCACTA 59.701 45.455 0.00 0.00 0.00 2.74
1937 3645 1.070758 AGTCTCACCATTTGCGTCACT 59.929 47.619 0.00 0.00 0.00 3.41
1938 3646 1.512926 AGTCTCACCATTTGCGTCAC 58.487 50.000 0.00 0.00 0.00 3.67
1939 3647 2.560981 TCTAGTCTCACCATTTGCGTCA 59.439 45.455 0.00 0.00 0.00 4.35
1940 3648 3.119459 TCTCTAGTCTCACCATTTGCGTC 60.119 47.826 0.00 0.00 0.00 5.19
1941 3649 2.826128 TCTCTAGTCTCACCATTTGCGT 59.174 45.455 0.00 0.00 0.00 5.24
1942 3650 3.510388 TCTCTAGTCTCACCATTTGCG 57.490 47.619 0.00 0.00 0.00 4.85
1943 3651 5.078411 TCTTCTCTAGTCTCACCATTTGC 57.922 43.478 0.00 0.00 0.00 3.68
1944 3652 6.760770 GGATTCTTCTCTAGTCTCACCATTTG 59.239 42.308 0.00 0.00 0.00 2.32
1945 3653 6.406400 CGGATTCTTCTCTAGTCTCACCATTT 60.406 42.308 0.00 0.00 0.00 2.32
1946 3654 5.068460 CGGATTCTTCTCTAGTCTCACCATT 59.932 44.000 0.00 0.00 0.00 3.16
1947 3655 4.582656 CGGATTCTTCTCTAGTCTCACCAT 59.417 45.833 0.00 0.00 0.00 3.55
1948 3656 3.948473 CGGATTCTTCTCTAGTCTCACCA 59.052 47.826 0.00 0.00 0.00 4.17
1949 3657 4.200874 TCGGATTCTTCTCTAGTCTCACC 58.799 47.826 0.00 0.00 0.00 4.02
1950 3658 5.220970 CCTTCGGATTCTTCTCTAGTCTCAC 60.221 48.000 0.00 0.00 0.00 3.51
1951 3659 4.884744 CCTTCGGATTCTTCTCTAGTCTCA 59.115 45.833 0.00 0.00 0.00 3.27
1952 3660 4.885325 ACCTTCGGATTCTTCTCTAGTCTC 59.115 45.833 0.00 0.00 0.00 3.36
1953 3661 4.862371 ACCTTCGGATTCTTCTCTAGTCT 58.138 43.478 0.00 0.00 0.00 3.24
1954 3662 6.696441 TTACCTTCGGATTCTTCTCTAGTC 57.304 41.667 0.00 0.00 0.00 2.59
1955 3663 5.068067 GCTTACCTTCGGATTCTTCTCTAGT 59.932 44.000 0.00 0.00 0.00 2.57
1956 3664 5.508320 GGCTTACCTTCGGATTCTTCTCTAG 60.508 48.000 0.00 0.00 0.00 2.43
1957 3665 4.341520 GGCTTACCTTCGGATTCTTCTCTA 59.658 45.833 0.00 0.00 0.00 2.43
1958 3666 3.133183 GGCTTACCTTCGGATTCTTCTCT 59.867 47.826 0.00 0.00 0.00 3.10
1959 3667 3.459145 GGCTTACCTTCGGATTCTTCTC 58.541 50.000 0.00 0.00 0.00 2.87
1960 3668 3.545366 GGCTTACCTTCGGATTCTTCT 57.455 47.619 0.00 0.00 0.00 2.85
2294 4002 0.388907 ATCCACAACTTGCGCAATGC 60.389 50.000 25.26 0.00 46.70 3.56
2295 4003 1.342555 CATCCACAACTTGCGCAATG 58.657 50.000 25.26 21.93 0.00 2.82
2296 4004 0.244450 CCATCCACAACTTGCGCAAT 59.756 50.000 25.26 6.90 0.00 3.56
2297 4005 0.821301 TCCATCCACAACTTGCGCAA 60.821 50.000 23.48 23.48 0.00 4.85
2298 4006 1.228094 TCCATCCACAACTTGCGCA 60.228 52.632 5.66 5.66 0.00 6.09
2299 4007 1.237285 ACTCCATCCACAACTTGCGC 61.237 55.000 0.00 0.00 0.00 6.09
2300 4008 0.518636 CACTCCATCCACAACTTGCG 59.481 55.000 0.00 0.00 0.00 4.85
2301 4009 0.883833 CCACTCCATCCACAACTTGC 59.116 55.000 0.00 0.00 0.00 4.01
2302 4010 2.276732 ACCACTCCATCCACAACTTG 57.723 50.000 0.00 0.00 0.00 3.16
2303 4011 3.751518 GTTACCACTCCATCCACAACTT 58.248 45.455 0.00 0.00 0.00 2.66
2304 4012 2.289444 CGTTACCACTCCATCCACAACT 60.289 50.000 0.00 0.00 0.00 3.16
2305 4013 2.073816 CGTTACCACTCCATCCACAAC 58.926 52.381 0.00 0.00 0.00 3.32
2306 4014 1.002659 CCGTTACCACTCCATCCACAA 59.997 52.381 0.00 0.00 0.00 3.33
2307 4015 0.611200 CCGTTACCACTCCATCCACA 59.389 55.000 0.00 0.00 0.00 4.17
2308 4016 0.899720 TCCGTTACCACTCCATCCAC 59.100 55.000 0.00 0.00 0.00 4.02
2309 4017 0.899720 GTCCGTTACCACTCCATCCA 59.100 55.000 0.00 0.00 0.00 3.41
2310 4018 0.179119 CGTCCGTTACCACTCCATCC 60.179 60.000 0.00 0.00 0.00 3.51
2311 4019 0.813184 TCGTCCGTTACCACTCCATC 59.187 55.000 0.00 0.00 0.00 3.51
2312 4020 0.815734 CTCGTCCGTTACCACTCCAT 59.184 55.000 0.00 0.00 0.00 3.41
2313 4021 1.246056 CCTCGTCCGTTACCACTCCA 61.246 60.000 0.00 0.00 0.00 3.86
2314 4022 1.246737 ACCTCGTCCGTTACCACTCC 61.247 60.000 0.00 0.00 0.00 3.85
2315 4023 0.600057 AACCTCGTCCGTTACCACTC 59.400 55.000 0.00 0.00 0.00 3.51
2316 4024 0.316204 CAACCTCGTCCGTTACCACT 59.684 55.000 0.00 0.00 0.00 4.00
2317 4025 1.287041 GCAACCTCGTCCGTTACCAC 61.287 60.000 0.00 0.00 0.00 4.16
2318 4026 1.005867 GCAACCTCGTCCGTTACCA 60.006 57.895 0.00 0.00 0.00 3.25
2319 4027 0.735287 GAGCAACCTCGTCCGTTACC 60.735 60.000 0.00 0.00 0.00 2.85
2320 4028 0.038892 TGAGCAACCTCGTCCGTTAC 60.039 55.000 0.00 0.00 41.13 2.50
2321 4029 0.675083 TTGAGCAACCTCGTCCGTTA 59.325 50.000 0.00 0.00 41.13 3.18
2322 4030 0.600255 CTTGAGCAACCTCGTCCGTT 60.600 55.000 0.00 0.00 41.13 4.44
2323 4031 1.006102 CTTGAGCAACCTCGTCCGT 60.006 57.895 0.00 0.00 41.13 4.69
2324 4032 2.383527 GCTTGAGCAACCTCGTCCG 61.384 63.158 0.00 0.00 41.13 4.79
2325 4033 3.567473 GCTTGAGCAACCTCGTCC 58.433 61.111 0.00 0.00 41.13 4.79
2335 4043 2.754995 GCTACCGCCTTGCTTGAGC 61.755 63.158 0.00 0.00 42.50 4.26
2336 4044 3.490890 GCTACCGCCTTGCTTGAG 58.509 61.111 0.00 0.00 0.00 3.02
2346 4054 2.388232 CGACACAAAGGGCTACCGC 61.388 63.158 0.00 0.00 43.47 5.68
2347 4055 0.108329 ATCGACACAAAGGGCTACCG 60.108 55.000 0.00 0.00 43.47 4.02
2348 4056 1.338769 ACATCGACACAAAGGGCTACC 60.339 52.381 0.00 0.00 0.00 3.18
2349 4057 2.094762 ACATCGACACAAAGGGCTAC 57.905 50.000 0.00 0.00 0.00 3.58
2350 4058 2.418197 GCTACATCGACACAAAGGGCTA 60.418 50.000 0.00 0.00 0.00 3.93
2351 4059 1.676014 GCTACATCGACACAAAGGGCT 60.676 52.381 0.00 0.00 0.00 5.19
2352 4060 0.727398 GCTACATCGACACAAAGGGC 59.273 55.000 0.00 0.00 0.00 5.19
2353 4061 1.369625 GGCTACATCGACACAAAGGG 58.630 55.000 0.00 0.00 0.00 3.95
2354 4062 0.999406 CGGCTACATCGACACAAAGG 59.001 55.000 0.00 0.00 0.00 3.11
2355 4063 1.920574 CTCGGCTACATCGACACAAAG 59.079 52.381 0.00 0.00 32.86 2.77
2356 4064 1.542472 TCTCGGCTACATCGACACAAA 59.458 47.619 0.00 0.00 32.86 2.83
2357 4065 1.132453 CTCTCGGCTACATCGACACAA 59.868 52.381 0.00 0.00 32.86 3.33
2358 4066 0.733150 CTCTCGGCTACATCGACACA 59.267 55.000 0.00 0.00 32.86 3.72
2359 4067 0.592754 GCTCTCGGCTACATCGACAC 60.593 60.000 0.00 0.00 38.06 3.67
2360 4068 1.029947 TGCTCTCGGCTACATCGACA 61.030 55.000 0.00 0.00 42.39 4.35
2361 4069 0.312416 ATGCTCTCGGCTACATCGAC 59.688 55.000 0.00 0.00 42.39 4.20
2362 4070 1.807142 CTATGCTCTCGGCTACATCGA 59.193 52.381 0.00 0.00 42.39 3.59
2363 4071 1.135546 CCTATGCTCTCGGCTACATCG 60.136 57.143 0.00 0.00 42.39 3.84
2364 4072 1.203523 CCCTATGCTCTCGGCTACATC 59.796 57.143 0.00 0.00 42.39 3.06
2365 4073 1.261480 CCCTATGCTCTCGGCTACAT 58.739 55.000 0.00 0.00 42.39 2.29
2366 4074 0.106167 ACCCTATGCTCTCGGCTACA 60.106 55.000 0.00 0.00 42.39 2.74
2367 4075 0.599060 GACCCTATGCTCTCGGCTAC 59.401 60.000 0.00 0.00 42.39 3.58
2368 4076 0.889638 CGACCCTATGCTCTCGGCTA 60.890 60.000 0.00 0.00 42.39 3.93
2369 4077 2.196925 CGACCCTATGCTCTCGGCT 61.197 63.158 0.00 0.00 42.39 5.52
2370 4078 2.336809 CGACCCTATGCTCTCGGC 59.663 66.667 0.00 0.00 42.22 5.54
2371 4079 1.360551 CACGACCCTATGCTCTCGG 59.639 63.158 0.00 0.00 0.00 4.63
2372 4080 1.264557 CTACACGACCCTATGCTCTCG 59.735 57.143 0.00 0.00 0.00 4.04
2373 4081 2.291190 GTCTACACGACCCTATGCTCTC 59.709 54.545 0.00 0.00 36.62 3.20
2374 4082 2.299521 GTCTACACGACCCTATGCTCT 58.700 52.381 0.00 0.00 36.62 4.09
2375 4083 2.778187 GTCTACACGACCCTATGCTC 57.222 55.000 0.00 0.00 36.62 4.26
2387 4095 1.789410 CGACATCGACCACGTCTACAC 60.789 57.143 0.00 0.00 43.02 2.90
2388 4096 0.445043 CGACATCGACCACGTCTACA 59.555 55.000 0.00 0.00 43.02 2.74
2389 4097 0.723414 TCGACATCGACCACGTCTAC 59.277 55.000 0.00 0.00 44.22 2.59
2390 4098 1.004595 CTCGACATCGACCACGTCTA 58.995 55.000 0.00 0.00 44.22 2.59
2391 4099 0.954449 ACTCGACATCGACCACGTCT 60.954 55.000 0.00 0.00 44.22 4.18
2392 4100 0.520827 GACTCGACATCGACCACGTC 60.521 60.000 0.00 3.01 44.22 4.34
2393 4101 1.232621 TGACTCGACATCGACCACGT 61.233 55.000 0.00 0.00 44.22 4.49
2394 4102 0.521450 CTGACTCGACATCGACCACG 60.521 60.000 0.00 0.00 44.22 4.94
2395 4103 0.179161 CCTGACTCGACATCGACCAC 60.179 60.000 0.00 0.00 44.22 4.16
2396 4104 1.313091 CCCTGACTCGACATCGACCA 61.313 60.000 0.00 1.17 44.22 4.02
2397 4105 1.313812 ACCCTGACTCGACATCGACC 61.314 60.000 0.00 0.00 44.22 4.79
2398 4106 1.331138 CTACCCTGACTCGACATCGAC 59.669 57.143 0.00 0.00 44.22 4.20
2400 4108 0.029567 GCTACCCTGACTCGACATCG 59.970 60.000 0.00 0.00 41.45 3.84
2401 4109 0.386113 GGCTACCCTGACTCGACATC 59.614 60.000 0.00 0.00 0.00 3.06
2402 4110 1.384989 CGGCTACCCTGACTCGACAT 61.385 60.000 0.00 0.00 0.00 3.06
2403 4111 2.044555 CGGCTACCCTGACTCGACA 61.045 63.158 0.00 0.00 0.00 4.35
2404 4112 2.772691 CCGGCTACCCTGACTCGAC 61.773 68.421 0.00 0.00 0.00 4.20
2405 4113 2.439701 CCGGCTACCCTGACTCGA 60.440 66.667 0.00 0.00 0.00 4.04
2406 4114 2.754658 ACCGGCTACCCTGACTCG 60.755 66.667 0.00 0.00 0.00 4.18
2407 4115 1.946475 GACACCGGCTACCCTGACTC 61.946 65.000 0.00 0.00 0.00 3.36
2408 4116 1.982938 GACACCGGCTACCCTGACT 60.983 63.158 0.00 0.00 0.00 3.41
2409 4117 2.577593 GACACCGGCTACCCTGAC 59.422 66.667 0.00 0.00 0.00 3.51
2410 4118 3.066190 CGACACCGGCTACCCTGA 61.066 66.667 0.00 0.00 0.00 3.86
2411 4119 3.064987 CTCGACACCGGCTACCCTG 62.065 68.421 0.00 0.00 36.24 4.45
2412 4120 2.754658 CTCGACACCGGCTACCCT 60.755 66.667 0.00 0.00 36.24 4.34
2413 4121 1.880819 TTTCTCGACACCGGCTACCC 61.881 60.000 0.00 0.00 36.24 3.69
2414 4122 0.458025 CTTTCTCGACACCGGCTACC 60.458 60.000 0.00 0.00 36.24 3.18
2415 4123 0.243095 ACTTTCTCGACACCGGCTAC 59.757 55.000 0.00 0.00 36.24 3.58
2416 4124 0.524862 GACTTTCTCGACACCGGCTA 59.475 55.000 0.00 0.00 36.24 3.93
2417 4125 1.289380 GACTTTCTCGACACCGGCT 59.711 57.895 0.00 0.00 36.24 5.52
2418 4126 2.087009 CGACTTTCTCGACACCGGC 61.087 63.158 0.00 0.00 46.14 6.13
2419 4127 2.087009 GCGACTTTCTCGACACCGG 61.087 63.158 0.00 0.00 46.14 5.28
2420 4128 3.449042 GCGACTTTCTCGACACCG 58.551 61.111 0.00 0.00 46.14 4.94
2425 4133 0.173481 CTCCATGGCGACTTTCTCGA 59.827 55.000 6.96 0.00 46.14 4.04
2426 4134 1.424493 GCTCCATGGCGACTTTCTCG 61.424 60.000 6.96 0.00 45.97 4.04
2427 4135 1.092345 GGCTCCATGGCGACTTTCTC 61.092 60.000 6.96 0.00 0.00 2.87
2428 4136 1.078143 GGCTCCATGGCGACTTTCT 60.078 57.895 6.96 0.00 0.00 2.52
2429 4137 3.502572 GGCTCCATGGCGACTTTC 58.497 61.111 6.96 0.00 0.00 2.62
2457 4165 2.508663 GACTAACTCGGCACCGCC 60.509 66.667 3.66 0.00 46.75 6.13
2458 4166 1.153628 ATGACTAACTCGGCACCGC 60.154 57.895 3.66 0.00 39.59 5.68
2459 4167 0.806102 CCATGACTAACTCGGCACCG 60.806 60.000 1.73 1.73 41.35 4.94
2460 4168 0.462047 CCCATGACTAACTCGGCACC 60.462 60.000 0.00 0.00 0.00 5.01
2461 4169 1.090052 GCCCATGACTAACTCGGCAC 61.090 60.000 0.00 0.00 36.38 5.01
2462 4170 1.220749 GCCCATGACTAACTCGGCA 59.779 57.895 0.00 0.00 36.38 5.69
2463 4171 4.126524 GCCCATGACTAACTCGGC 57.873 61.111 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.