Multiple sequence alignment - TraesCS7A01G557300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G557300 chr7A 100.000 5651 0 0 1 5651 729402208 729396558 0.000000e+00 10436.0
1 TraesCS7A01G557300 chr7A 96.108 668 23 3 3337 4002 706120015 706119349 0.000000e+00 1086.0
2 TraesCS7A01G557300 chr7A 87.118 621 60 14 4461 5074 729356174 729355567 0.000000e+00 686.0
3 TraesCS7A01G557300 chr7A 86.795 621 62 14 4461 5074 729333254 729332647 0.000000e+00 675.0
4 TraesCS7A01G557300 chr7A 83.191 351 55 4 2979 3326 729334101 729333752 9.140000e-83 318.0
5 TraesCS7A01G557300 chr7A 83.191 351 55 4 2979 3326 729357022 729356673 9.140000e-83 318.0
6 TraesCS7A01G557300 chr7A 84.691 307 37 6 4078 4376 729333679 729333375 1.190000e-76 298.0
7 TraesCS7A01G557300 chr7A 84.691 307 38 5 4078 4376 729356600 729356295 1.190000e-76 298.0
8 TraesCS7A01G557300 chr7D 91.200 2500 129 36 475 2918 636765943 636768407 0.000000e+00 3314.0
9 TraesCS7A01G557300 chr7D 91.800 1378 87 15 4009 5370 636770028 636771395 0.000000e+00 1895.0
10 TraesCS7A01G557300 chr7D 94.256 383 16 3 2960 3336 636769661 636770043 1.060000e-161 580.0
11 TraesCS7A01G557300 chr7D 82.979 705 54 35 988 1675 566310976 566311631 1.370000e-160 577.0
12 TraesCS7A01G557300 chr7D 89.418 189 7 8 210 393 636765710 636765890 5.700000e-55 226.0
13 TraesCS7A01G557300 chr7D 90.385 52 3 1 433 482 636765887 636765938 3.650000e-07 67.6
14 TraesCS7A01G557300 chr7B 89.184 2376 145 43 475 2784 739445990 739443661 0.000000e+00 2861.0
15 TraesCS7A01G557300 chr7B 89.763 1348 92 18 4011 5326 739443154 739441821 0.000000e+00 1683.0
16 TraesCS7A01G557300 chr7B 97.474 673 15 2 3336 4006 51062621 51061949 0.000000e+00 1147.0
17 TraesCS7A01G557300 chr7B 86.541 639 52 12 4421 5048 739415304 739414689 0.000000e+00 673.0
18 TraesCS7A01G557300 chr7B 86.541 639 52 12 4421 5048 739419002 739418387 0.000000e+00 673.0
19 TraesCS7A01G557300 chr7B 89.194 509 41 8 2834 3336 739443641 739443141 1.730000e-174 623.0
20 TraesCS7A01G557300 chr7B 93.668 379 18 3 4013 4387 739415691 739415315 3.820000e-156 562.0
21 TraesCS7A01G557300 chr7B 93.668 379 18 3 4013 4387 739419662 739419286 3.820000e-156 562.0
22 TraesCS7A01G557300 chr7B 96.154 286 11 0 3051 3336 739415965 739415680 8.570000e-128 468.0
23 TraesCS7A01G557300 chr7B 96.154 286 11 0 3051 3336 739419936 739419651 8.570000e-128 468.0
24 TraesCS7A01G557300 chr7B 87.544 281 30 5 5371 5651 739425524 739425249 2.540000e-83 320.0
25 TraesCS7A01G557300 chr7B 91.925 161 8 4 240 400 739446215 739446060 2.650000e-53 220.0
26 TraesCS7A01G557300 chr7B 100.000 45 0 0 5326 5370 739425697 739425653 3.630000e-12 84.2
27 TraesCS7A01G557300 chr6B 85.754 1425 134 29 1447 2839 431161782 431160395 0.000000e+00 1443.0
28 TraesCS7A01G557300 chr6B 85.544 1425 133 30 1447 2839 431205656 431204273 0.000000e+00 1423.0
29 TraesCS7A01G557300 chrUn 96.423 671 20 4 3336 4002 31721387 31720717 0.000000e+00 1103.0
30 TraesCS7A01G557300 chr5A 96.407 668 22 2 3337 4002 40156172 40156839 0.000000e+00 1099.0
31 TraesCS7A01G557300 chr2B 96.257 668 22 3 3338 4002 693229890 693229223 0.000000e+00 1092.0
32 TraesCS7A01G557300 chr1B 96.125 671 22 4 3336 4002 279907074 279906404 0.000000e+00 1092.0
33 TraesCS7A01G557300 chr1A 96.114 669 24 2 3336 4002 586503205 586503873 0.000000e+00 1090.0
34 TraesCS7A01G557300 chr1A 95.536 672 28 2 3333 4002 23065722 23066393 0.000000e+00 1074.0
35 TraesCS7A01G557300 chr6A 96.119 670 20 4 3336 4002 85580222 85580888 0.000000e+00 1088.0
36 TraesCS7A01G557300 chr5B 89.109 202 17 2 1868 2068 483351844 483351647 4.370000e-61 246.0
37 TraesCS7A01G557300 chr4A 81.522 276 40 9 1001 1270 374662364 374662094 3.430000e-52 217.0
38 TraesCS7A01G557300 chr4A 91.367 139 11 1 1133 1270 374662050 374661912 7.470000e-44 189.0
39 TraesCS7A01G557300 chr4D 80.277 289 39 13 988 1267 374779361 374779640 9.600000e-48 202.0
40 TraesCS7A01G557300 chr4D 92.593 135 9 1 1134 1267 374779688 374779822 5.780000e-45 193.0
41 TraesCS7A01G557300 chr2D 78.049 287 50 11 991 1270 389696076 389695796 9.740000e-38 169.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G557300 chr7A 729396558 729402208 5650 True 10436.000000 10436 100.000000 1 5651 1 chr7A.!!$R2 5650
1 TraesCS7A01G557300 chr7A 706119349 706120015 666 True 1086.000000 1086 96.108000 3337 4002 1 chr7A.!!$R1 665
2 TraesCS7A01G557300 chr7A 729355567 729357022 1455 True 434.000000 686 85.000000 2979 5074 3 chr7A.!!$R4 2095
3 TraesCS7A01G557300 chr7A 729332647 729334101 1454 True 430.333333 675 84.892333 2979 5074 3 chr7A.!!$R3 2095
4 TraesCS7A01G557300 chr7D 636765710 636771395 5685 False 1216.520000 3314 91.411800 210 5370 5 chr7D.!!$F2 5160
5 TraesCS7A01G557300 chr7D 566310976 566311631 655 False 577.000000 577 82.979000 988 1675 1 chr7D.!!$F1 687
6 TraesCS7A01G557300 chr7B 739441821 739446215 4394 True 1346.750000 2861 90.016500 240 5326 4 chr7B.!!$R4 5086
7 TraesCS7A01G557300 chr7B 51061949 51062621 672 True 1147.000000 1147 97.474000 3336 4006 1 chr7B.!!$R1 670
8 TraesCS7A01G557300 chr7B 739414689 739419936 5247 True 567.666667 673 92.121000 3051 5048 6 chr7B.!!$R2 1997
9 TraesCS7A01G557300 chr6B 431160395 431161782 1387 True 1443.000000 1443 85.754000 1447 2839 1 chr6B.!!$R1 1392
10 TraesCS7A01G557300 chr6B 431204273 431205656 1383 True 1423.000000 1423 85.544000 1447 2839 1 chr6B.!!$R2 1392
11 TraesCS7A01G557300 chrUn 31720717 31721387 670 True 1103.000000 1103 96.423000 3336 4002 1 chrUn.!!$R1 666
12 TraesCS7A01G557300 chr5A 40156172 40156839 667 False 1099.000000 1099 96.407000 3337 4002 1 chr5A.!!$F1 665
13 TraesCS7A01G557300 chr2B 693229223 693229890 667 True 1092.000000 1092 96.257000 3338 4002 1 chr2B.!!$R1 664
14 TraesCS7A01G557300 chr1B 279906404 279907074 670 True 1092.000000 1092 96.125000 3336 4002 1 chr1B.!!$R1 666
15 TraesCS7A01G557300 chr1A 586503205 586503873 668 False 1090.000000 1090 96.114000 3336 4002 1 chr1A.!!$F2 666
16 TraesCS7A01G557300 chr1A 23065722 23066393 671 False 1074.000000 1074 95.536000 3333 4002 1 chr1A.!!$F1 669
17 TraesCS7A01G557300 chr6A 85580222 85580888 666 False 1088.000000 1088 96.119000 3336 4002 1 chr6A.!!$F1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 115 0.037139 TGCCAAGTCCATGCAAATGC 60.037 50.0 0.0 0.0 42.50 3.56 F
1112 1226 0.036388 CGCCTGCTACCCAAGAAGAA 60.036 55.0 0.0 0.0 31.45 2.52 F
2131 2270 0.039618 TCCTCAAATTGCCTGGGGAC 59.960 55.0 0.0 0.0 38.60 4.46 F
2132 2271 0.251742 CCTCAAATTGCCTGGGGACA 60.252 55.0 0.0 0.0 36.42 4.02 F
3855 5245 0.796312 CACGGCATGTACAAGGTGAC 59.204 55.0 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1846 1977 2.368548 GCCAATTTTCTTGGGGAGTGTT 59.631 45.455 6.16 0.0 39.90 3.32 R
2396 2537 0.539518 TTATGCACCGGCTAAGCTGA 59.460 50.000 0.00 0.0 41.91 4.26 R
3952 5342 0.108585 GCTTGTCTGGTTCCTGGTGA 59.891 55.000 0.00 0.0 0.00 4.02 R
3997 5388 1.654137 TACAAGGGATGGGCATGGGG 61.654 60.000 0.00 0.0 0.00 4.96 R
5382 8614 0.034477 AATTGACCGGCCTACCCAAG 60.034 55.000 0.00 0.0 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.357742 TGATGGTACGTACTACTCCTACA 57.642 43.478 24.07 11.85 0.00 2.74
23 24 5.363101 TGATGGTACGTACTACTCCTACAG 58.637 45.833 24.07 0.00 0.00 2.74
24 25 5.129320 TGATGGTACGTACTACTCCTACAGA 59.871 44.000 24.07 1.25 0.00 3.41
25 26 5.620738 TGGTACGTACTACTCCTACAGAT 57.379 43.478 24.07 0.00 0.00 2.90
26 27 5.363101 TGGTACGTACTACTCCTACAGATG 58.637 45.833 24.07 0.00 0.00 2.90
27 28 4.213059 GGTACGTACTACTCCTACAGATGC 59.787 50.000 24.07 0.00 0.00 3.91
28 29 2.871022 ACGTACTACTCCTACAGATGCG 59.129 50.000 0.00 0.00 0.00 4.73
29 30 2.223611 CGTACTACTCCTACAGATGCGG 59.776 54.545 0.00 0.00 0.00 5.69
30 31 2.730934 ACTACTCCTACAGATGCGGA 57.269 50.000 0.00 0.00 0.00 5.54
48 49 3.466879 GCTTTTGCTTGCATCGCC 58.533 55.556 6.10 0.00 43.35 5.54
49 50 1.080298 GCTTTTGCTTGCATCGCCT 60.080 52.632 6.10 0.00 43.35 5.52
50 51 1.074872 GCTTTTGCTTGCATCGCCTC 61.075 55.000 6.10 0.00 43.35 4.70
51 52 0.241749 CTTTTGCTTGCATCGCCTCA 59.758 50.000 6.10 0.00 0.00 3.86
52 53 0.672889 TTTTGCTTGCATCGCCTCAA 59.327 45.000 6.10 0.00 0.00 3.02
53 54 0.672889 TTTGCTTGCATCGCCTCAAA 59.327 45.000 6.10 0.00 0.00 2.69
54 55 0.241749 TTGCTTGCATCGCCTCAAAG 59.758 50.000 6.10 0.00 0.00 2.77
55 56 0.606130 TGCTTGCATCGCCTCAAAGA 60.606 50.000 6.10 0.00 0.00 2.52
56 57 0.523072 GCTTGCATCGCCTCAAAGAA 59.477 50.000 0.00 0.00 0.00 2.52
57 58 1.068333 GCTTGCATCGCCTCAAAGAAA 60.068 47.619 0.00 0.00 0.00 2.52
58 59 2.607771 GCTTGCATCGCCTCAAAGAAAA 60.608 45.455 0.00 0.00 0.00 2.29
59 60 2.995466 TGCATCGCCTCAAAGAAAAG 57.005 45.000 0.00 0.00 0.00 2.27
60 61 2.503331 TGCATCGCCTCAAAGAAAAGA 58.497 42.857 0.00 0.00 0.00 2.52
61 62 3.084039 TGCATCGCCTCAAAGAAAAGAT 58.916 40.909 0.00 0.00 0.00 2.40
62 63 3.507233 TGCATCGCCTCAAAGAAAAGATT 59.493 39.130 0.00 0.00 0.00 2.40
63 64 4.022068 TGCATCGCCTCAAAGAAAAGATTT 60.022 37.500 0.00 0.00 0.00 2.17
64 65 4.925646 GCATCGCCTCAAAGAAAAGATTTT 59.074 37.500 0.00 0.00 0.00 1.82
65 66 5.406477 GCATCGCCTCAAAGAAAAGATTTTT 59.594 36.000 0.00 0.00 0.00 1.94
66 67 6.617105 GCATCGCCTCAAAGAAAAGATTTTTG 60.617 38.462 0.00 0.00 34.07 2.44
67 68 5.901552 TCGCCTCAAAGAAAAGATTTTTGT 58.098 33.333 0.00 0.00 34.35 2.83
68 69 6.337356 TCGCCTCAAAGAAAAGATTTTTGTT 58.663 32.000 0.00 0.00 34.35 2.83
69 70 6.816140 TCGCCTCAAAGAAAAGATTTTTGTTT 59.184 30.769 4.25 4.25 34.35 2.83
70 71 7.976734 TCGCCTCAAAGAAAAGATTTTTGTTTA 59.023 29.630 8.47 0.56 34.35 2.01
71 72 8.599774 CGCCTCAAAGAAAAGATTTTTGTTTAA 58.400 29.630 8.47 0.00 34.35 1.52
72 73 9.920826 GCCTCAAAGAAAAGATTTTTGTTTAAG 57.079 29.630 8.47 5.12 34.35 1.85
98 99 9.473640 GAAGGTAGTAGTAGTAAAATGTATGCC 57.526 37.037 0.00 0.00 0.00 4.40
99 100 8.543293 AGGTAGTAGTAGTAAAATGTATGCCA 57.457 34.615 0.00 0.00 0.00 4.92
100 101 8.984855 AGGTAGTAGTAGTAAAATGTATGCCAA 58.015 33.333 0.00 0.00 0.00 4.52
101 102 9.257651 GGTAGTAGTAGTAAAATGTATGCCAAG 57.742 37.037 0.00 0.00 0.00 3.61
102 103 9.813446 GTAGTAGTAGTAAAATGTATGCCAAGT 57.187 33.333 0.00 0.00 0.00 3.16
103 104 8.943909 AGTAGTAGTAAAATGTATGCCAAGTC 57.056 34.615 0.00 0.00 0.00 3.01
104 105 7.985752 AGTAGTAGTAAAATGTATGCCAAGTCC 59.014 37.037 0.00 0.00 0.00 3.85
105 106 6.717289 AGTAGTAAAATGTATGCCAAGTCCA 58.283 36.000 0.00 0.00 0.00 4.02
106 107 7.346471 AGTAGTAAAATGTATGCCAAGTCCAT 58.654 34.615 0.00 0.00 0.00 3.41
107 108 6.455360 AGTAAAATGTATGCCAAGTCCATG 57.545 37.500 0.00 0.00 0.00 3.66
108 109 3.806625 AAATGTATGCCAAGTCCATGC 57.193 42.857 0.00 0.00 0.00 4.06
109 110 2.440517 ATGTATGCCAAGTCCATGCA 57.559 45.000 0.00 0.00 39.12 3.96
110 111 2.212812 TGTATGCCAAGTCCATGCAA 57.787 45.000 0.00 0.00 38.69 4.08
111 112 2.523245 TGTATGCCAAGTCCATGCAAA 58.477 42.857 0.00 0.00 38.69 3.68
112 113 3.098377 TGTATGCCAAGTCCATGCAAAT 58.902 40.909 0.00 0.00 38.69 2.32
113 114 2.684001 ATGCCAAGTCCATGCAAATG 57.316 45.000 0.00 0.00 38.69 2.32
114 115 0.037139 TGCCAAGTCCATGCAAATGC 60.037 50.000 0.00 0.00 42.50 3.56
126 127 2.088950 GCAAATGCAAGCAAGATGGT 57.911 45.000 0.00 0.00 41.59 3.55
127 128 2.419667 GCAAATGCAAGCAAGATGGTT 58.580 42.857 0.00 0.00 38.82 3.67
128 129 2.414138 GCAAATGCAAGCAAGATGGTTC 59.586 45.455 0.00 0.00 35.69 3.62
129 130 3.863400 GCAAATGCAAGCAAGATGGTTCT 60.863 43.478 0.00 0.00 35.69 3.01
130 131 3.587797 AATGCAAGCAAGATGGTTCTG 57.412 42.857 0.00 0.00 35.69 3.02
131 132 1.985473 TGCAAGCAAGATGGTTCTGT 58.015 45.000 0.00 0.00 35.69 3.41
132 133 1.881973 TGCAAGCAAGATGGTTCTGTC 59.118 47.619 0.00 0.00 35.69 3.51
133 134 1.881973 GCAAGCAAGATGGTTCTGTCA 59.118 47.619 0.00 0.00 35.69 3.58
134 135 2.351157 GCAAGCAAGATGGTTCTGTCAC 60.351 50.000 0.00 0.00 35.69 3.67
135 136 3.144506 CAAGCAAGATGGTTCTGTCACT 58.855 45.455 0.00 0.00 35.69 3.41
136 137 4.318332 CAAGCAAGATGGTTCTGTCACTA 58.682 43.478 0.00 0.00 35.69 2.74
137 138 4.199432 AGCAAGATGGTTCTGTCACTAG 57.801 45.455 0.00 0.00 30.72 2.57
138 139 3.834813 AGCAAGATGGTTCTGTCACTAGA 59.165 43.478 0.00 0.00 30.72 2.43
139 140 4.284490 AGCAAGATGGTTCTGTCACTAGAA 59.716 41.667 0.00 0.00 34.46 2.10
149 150 5.661056 TCTGTCACTAGAACAAGGTATGG 57.339 43.478 0.00 0.00 0.00 2.74
150 151 5.084519 TCTGTCACTAGAACAAGGTATGGT 58.915 41.667 0.00 0.00 0.00 3.55
151 152 6.250711 TCTGTCACTAGAACAAGGTATGGTA 58.749 40.000 0.00 0.00 0.00 3.25
152 153 6.722590 TCTGTCACTAGAACAAGGTATGGTAA 59.277 38.462 0.00 0.00 0.00 2.85
153 154 7.399191 TCTGTCACTAGAACAAGGTATGGTAAT 59.601 37.037 0.00 0.00 0.00 1.89
154 155 7.327975 TGTCACTAGAACAAGGTATGGTAATG 58.672 38.462 0.00 0.00 0.00 1.90
155 156 6.258068 GTCACTAGAACAAGGTATGGTAATGC 59.742 42.308 0.00 0.00 0.00 3.56
156 157 6.070481 TCACTAGAACAAGGTATGGTAATGCA 60.070 38.462 0.00 0.00 0.00 3.96
157 158 6.597672 CACTAGAACAAGGTATGGTAATGCAA 59.402 38.462 0.00 0.00 0.00 4.08
158 159 7.120579 CACTAGAACAAGGTATGGTAATGCAAA 59.879 37.037 0.00 0.00 0.00 3.68
159 160 6.267496 AGAACAAGGTATGGTAATGCAAAC 57.733 37.500 0.00 0.00 0.00 2.93
160 161 4.695217 ACAAGGTATGGTAATGCAAACG 57.305 40.909 0.00 0.00 0.00 3.60
161 162 4.076394 ACAAGGTATGGTAATGCAAACGT 58.924 39.130 0.00 0.00 0.00 3.99
162 163 4.083003 ACAAGGTATGGTAATGCAAACGTG 60.083 41.667 0.00 0.00 0.00 4.49
163 164 3.945346 AGGTATGGTAATGCAAACGTGA 58.055 40.909 0.00 0.00 0.00 4.35
164 165 4.523083 AGGTATGGTAATGCAAACGTGAT 58.477 39.130 0.00 0.00 0.00 3.06
165 166 4.947388 AGGTATGGTAATGCAAACGTGATT 59.053 37.500 0.00 0.00 0.00 2.57
166 167 5.417580 AGGTATGGTAATGCAAACGTGATTT 59.582 36.000 0.00 0.00 0.00 2.17
167 168 6.071616 AGGTATGGTAATGCAAACGTGATTTT 60.072 34.615 0.00 0.00 0.00 1.82
168 169 6.588373 GGTATGGTAATGCAAACGTGATTTTT 59.412 34.615 0.00 0.00 0.00 1.94
184 185 2.573920 TTTTTGGATGCTACCGCCC 58.426 52.632 0.00 0.00 34.43 6.13
185 186 0.251386 TTTTTGGATGCTACCGCCCA 60.251 50.000 0.00 0.00 34.43 5.36
186 187 0.963355 TTTTGGATGCTACCGCCCAC 60.963 55.000 0.00 0.00 34.43 4.61
187 188 2.130821 TTTGGATGCTACCGCCCACA 62.131 55.000 0.00 0.00 34.43 4.17
188 189 2.513897 GGATGCTACCGCCCACAC 60.514 66.667 0.00 0.00 34.43 3.82
189 190 2.267642 GATGCTACCGCCCACACA 59.732 61.111 0.00 0.00 34.43 3.72
190 191 1.153168 GATGCTACCGCCCACACAT 60.153 57.895 0.00 0.00 34.43 3.21
191 192 1.439353 GATGCTACCGCCCACACATG 61.439 60.000 0.00 0.00 34.43 3.21
192 193 2.046314 GCTACCGCCCACACATGT 60.046 61.111 0.00 0.00 0.00 3.21
193 194 1.674322 GCTACCGCCCACACATGTT 60.674 57.895 0.00 0.00 0.00 2.71
194 195 1.241315 GCTACCGCCCACACATGTTT 61.241 55.000 0.00 0.00 0.00 2.83
195 196 1.946747 GCTACCGCCCACACATGTTTA 60.947 52.381 0.00 0.00 0.00 2.01
196 197 2.428491 CTACCGCCCACACATGTTTAA 58.572 47.619 0.00 0.00 0.00 1.52
197 198 0.955905 ACCGCCCACACATGTTTAAC 59.044 50.000 0.00 0.00 0.00 2.01
198 199 0.242555 CCGCCCACACATGTTTAACC 59.757 55.000 0.00 0.00 0.00 2.85
199 200 0.955178 CGCCCACACATGTTTAACCA 59.045 50.000 0.00 0.00 0.00 3.67
200 201 1.335506 CGCCCACACATGTTTAACCAC 60.336 52.381 0.00 0.00 0.00 4.16
201 202 1.000394 GCCCACACATGTTTAACCACC 60.000 52.381 0.00 0.00 0.00 4.61
202 203 1.268352 CCCACACATGTTTAACCACCG 59.732 52.381 0.00 0.00 0.00 4.94
203 204 1.268352 CCACACATGTTTAACCACCGG 59.732 52.381 0.00 0.00 0.00 5.28
204 205 0.955905 ACACATGTTTAACCACCGGC 59.044 50.000 0.00 0.00 0.00 6.13
205 206 0.109964 CACATGTTTAACCACCGGCG 60.110 55.000 0.00 0.00 0.00 6.46
206 207 1.154112 CATGTTTAACCACCGGCGC 60.154 57.895 0.00 0.00 0.00 6.53
207 208 2.337246 ATGTTTAACCACCGGCGCC 61.337 57.895 19.07 19.07 0.00 6.53
208 209 2.979120 GTTTAACCACCGGCGCCA 60.979 61.111 28.98 0.53 0.00 5.69
370 381 4.227134 CCCTCATCTCACCGGCCG 62.227 72.222 21.04 21.04 0.00 6.13
371 382 4.227134 CCTCATCTCACCGGCCGG 62.227 72.222 42.17 42.17 42.03 6.13
372 383 4.899239 CTCATCTCACCGGCCGGC 62.899 72.222 43.58 21.18 39.32 6.13
393 404 1.134965 CATTGTCTCCTCCACGTCTCC 60.135 57.143 0.00 0.00 0.00 3.71
396 407 0.612453 GTCTCCTCCACGTCTCCCTT 60.612 60.000 0.00 0.00 0.00 3.95
398 409 0.323908 CTCCTCCACGTCTCCCTTCT 60.324 60.000 0.00 0.00 0.00 2.85
399 410 0.323542 TCCTCCACGTCTCCCTTCTC 60.324 60.000 0.00 0.00 0.00 2.87
400 411 0.323908 CCTCCACGTCTCCCTTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
401 412 1.099689 CTCCACGTCTCCCTTCTCTC 58.900 60.000 0.00 0.00 0.00 3.20
402 413 0.699399 TCCACGTCTCCCTTCTCTCT 59.301 55.000 0.00 0.00 0.00 3.10
403 414 1.099689 CCACGTCTCCCTTCTCTCTC 58.900 60.000 0.00 0.00 0.00 3.20
404 415 1.340600 CCACGTCTCCCTTCTCTCTCT 60.341 57.143 0.00 0.00 0.00 3.10
405 416 2.014128 CACGTCTCCCTTCTCTCTCTC 58.986 57.143 0.00 0.00 0.00 3.20
406 417 1.913419 ACGTCTCCCTTCTCTCTCTCT 59.087 52.381 0.00 0.00 0.00 3.10
407 418 2.093128 ACGTCTCCCTTCTCTCTCTCTC 60.093 54.545 0.00 0.00 0.00 3.20
408 419 2.170607 CGTCTCCCTTCTCTCTCTCTCT 59.829 54.545 0.00 0.00 0.00 3.10
409 420 3.741388 CGTCTCCCTTCTCTCTCTCTCTC 60.741 56.522 0.00 0.00 0.00 3.20
410 421 3.456277 GTCTCCCTTCTCTCTCTCTCTCT 59.544 52.174 0.00 0.00 0.00 3.10
411 422 3.711704 TCTCCCTTCTCTCTCTCTCTCTC 59.288 52.174 0.00 0.00 0.00 3.20
412 423 3.713764 CTCCCTTCTCTCTCTCTCTCTCT 59.286 52.174 0.00 0.00 0.00 3.10
413 424 3.711704 TCCCTTCTCTCTCTCTCTCTCTC 59.288 52.174 0.00 0.00 0.00 3.20
414 425 3.713764 CCCTTCTCTCTCTCTCTCTCTCT 59.286 52.174 0.00 0.00 0.00 3.10
415 426 4.202305 CCCTTCTCTCTCTCTCTCTCTCTC 60.202 54.167 0.00 0.00 0.00 3.20
416 427 4.653341 CCTTCTCTCTCTCTCTCTCTCTCT 59.347 50.000 0.00 0.00 0.00 3.10
417 428 5.221422 CCTTCTCTCTCTCTCTCTCTCTCTC 60.221 52.000 0.00 0.00 0.00 3.20
418 429 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
419 430 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
420 431 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
421 432 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
422 433 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
423 434 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
424 435 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
425 436 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
426 437 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
427 438 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
428 439 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
429 440 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
430 441 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
431 442 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
432 443 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
433 444 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
434 445 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
435 446 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
436 447 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
437 448 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
438 449 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
439 450 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
440 451 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
441 452 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
442 453 4.871822 TCTCTCTCTCTCTCTCTCTCTCA 58.128 47.826 0.00 0.00 0.00 3.27
443 454 5.272402 TCTCTCTCTCTCTCTCTCTCTCAA 58.728 45.833 0.00 0.00 0.00 3.02
444 455 5.721480 TCTCTCTCTCTCTCTCTCTCTCAAA 59.279 44.000 0.00 0.00 0.00 2.69
445 456 5.982356 TCTCTCTCTCTCTCTCTCTCAAAG 58.018 45.833 0.00 0.00 0.00 2.77
446 457 5.102953 TCTCTCTCTCTCTCTCTCAAAGG 57.897 47.826 0.00 0.00 0.00 3.11
447 458 3.620488 TCTCTCTCTCTCTCTCAAAGGC 58.380 50.000 0.00 0.00 0.00 4.35
482 521 1.247419 ACACTGGACGCAGAGAGAGG 61.247 60.000 0.00 0.00 0.00 3.69
560 611 1.391157 GCTCACTCTCAGCGGGATCT 61.391 60.000 0.00 0.00 0.00 2.75
569 620 4.944372 GCGGGATCTGGCCGTACG 62.944 72.222 8.69 8.69 0.00 3.67
579 630 1.587088 GGCCGTACGTGTGTATCGG 60.587 63.158 15.21 4.15 42.74 4.18
582 633 0.864377 CCGTACGTGTGTATCGGCTG 60.864 60.000 15.21 0.00 37.93 4.85
587 638 1.014044 CGTGTGTATCGGCTGCTTGT 61.014 55.000 0.00 0.00 0.00 3.16
744 804 7.293745 CACAAGAGAATTGTCGCCATTATATC 58.706 38.462 0.00 0.00 0.00 1.63
758 818 6.515035 CGCCATTATATCTCACTCACTGTGTA 60.515 42.308 7.79 0.00 46.27 2.90
759 819 6.865726 GCCATTATATCTCACTCACTGTGTAG 59.134 42.308 7.79 6.69 46.27 2.74
761 821 9.067986 CCATTATATCTCACTCACTGTGTAGTA 57.932 37.037 7.79 0.00 46.27 1.82
783 867 4.617556 TGCAGGGGTGCATGGCAA 62.618 61.111 0.00 0.00 41.47 4.52
941 1042 1.448717 GCAGAGCTCCGTTTCCTCC 60.449 63.158 10.93 0.00 0.00 4.30
942 1043 1.893919 GCAGAGCTCCGTTTCCTCCT 61.894 60.000 10.93 0.00 0.00 3.69
944 1045 1.139947 GAGCTCCGTTTCCTCCTCG 59.860 63.158 0.87 0.00 0.00 4.63
945 1046 2.184579 GCTCCGTTTCCTCCTCGG 59.815 66.667 0.00 0.00 44.76 4.63
947 1048 3.701604 CTCCGTTTCCTCCTCGGCG 62.702 68.421 0.00 0.00 43.35 6.46
1101 1215 3.774528 CAGTGCTCCCGCCTGCTA 61.775 66.667 0.00 0.00 34.43 3.49
1112 1226 0.036388 CGCCTGCTACCCAAGAAGAA 60.036 55.000 0.00 0.00 31.45 2.52
1113 1227 1.610624 CGCCTGCTACCCAAGAAGAAA 60.611 52.381 0.00 0.00 31.45 2.52
1349 1467 3.351416 CTCGCAGCAACAGCAGCA 61.351 61.111 5.73 0.00 40.37 4.41
1532 1657 3.670377 GTGCCAAGCCGGTGTTCC 61.670 66.667 1.90 0.00 36.97 3.62
1594 1719 0.393537 CAGGGACCTTGCTGATGACC 60.394 60.000 0.00 0.00 0.00 4.02
1640 1770 4.448210 GGCCATCTACGGTAATCTGAAAA 58.552 43.478 0.00 0.00 0.00 2.29
1641 1771 5.063880 GGCCATCTACGGTAATCTGAAAAT 58.936 41.667 0.00 0.00 0.00 1.82
1686 1816 1.000060 CATTGTTGCTCCCCTGTTGTG 60.000 52.381 0.00 0.00 0.00 3.33
1719 1849 5.106442 TGTGTCACACAGTGTTAGTTAGTG 58.894 41.667 6.50 0.00 39.62 2.74
1874 2005 3.326297 CCCCAAGAAAATTGGCCACTTTA 59.674 43.478 20.21 0.00 38.23 1.85
1875 2011 4.202409 CCCCAAGAAAATTGGCCACTTTAA 60.202 41.667 20.21 0.00 38.23 1.52
1948 2084 2.162809 TGCTGAACTTGCATGCTATGTG 59.837 45.455 20.33 2.12 35.31 3.21
1953 2091 5.698832 TGAACTTGCATGCTATGTGTTTAC 58.301 37.500 20.33 2.51 0.00 2.01
1971 2109 9.565090 TGTGTTTACAGATACTCCTATATACGT 57.435 33.333 0.00 0.00 31.91 3.57
1996 2134 9.968870 GTAGTATAGTCAGTGAAGAATAAAGGG 57.031 37.037 0.00 0.00 0.00 3.95
1997 2135 8.611051 AGTATAGTCAGTGAAGAATAAAGGGT 57.389 34.615 0.00 0.00 0.00 4.34
2000 2138 5.238583 AGTCAGTGAAGAATAAAGGGTTCG 58.761 41.667 0.00 0.00 0.00 3.95
2088 2227 5.880332 TGGCTTCAATAGGATCAAAGTACAC 59.120 40.000 0.00 0.00 0.00 2.90
2122 2261 7.063780 GGTTGCAAGAACATATTCCTCAAATTG 59.936 37.037 0.00 0.00 35.18 2.32
2124 2263 5.521372 GCAAGAACATATTCCTCAAATTGCC 59.479 40.000 0.00 0.00 34.69 4.52
2126 2265 6.461110 AGAACATATTCCTCAAATTGCCTG 57.539 37.500 0.00 0.00 35.18 4.85
2127 2266 5.361857 AGAACATATTCCTCAAATTGCCTGG 59.638 40.000 0.00 0.00 35.18 4.45
2131 2270 0.039618 TCCTCAAATTGCCTGGGGAC 59.960 55.000 0.00 0.00 38.60 4.46
2132 2271 0.251742 CCTCAAATTGCCTGGGGACA 60.252 55.000 0.00 0.00 36.42 4.02
2146 2286 2.293519 TGGGGACATGAATCTGAGGGTA 60.294 50.000 0.00 0.00 33.40 3.69
2181 2321 9.981460 TCTAAATGAGATATACTCTAGGCATCA 57.019 33.333 0.00 0.00 45.13 3.07
2396 2537 7.037297 CCAAGTTCCCCATAGATATTCAGGTAT 60.037 40.741 0.00 0.00 0.00 2.73
2482 2626 3.459227 TGGATATTCCCTGTCAGCATCAA 59.541 43.478 0.00 0.00 35.03 2.57
2565 2732 1.202200 TGTTTCGTTTGTCGGCCTTTG 60.202 47.619 0.00 0.00 40.32 2.77
2630 2797 2.280308 TTGTAGTGGGGGCTTATCCT 57.720 50.000 0.00 0.00 34.39 3.24
2729 2896 8.943909 ACTTTTCAGTAAGTATTATTCCCGAG 57.056 34.615 0.00 0.00 36.62 4.63
2805 2972 2.498078 GGGAGAGTCCAAGTAACTCCAG 59.502 54.545 0.00 0.00 46.00 3.86
2843 3010 5.245531 TCATGAAAATGTACCTGGTCACTC 58.754 41.667 0.63 1.21 0.00 3.51
2901 3068 3.985925 CCCATATAAACCGCGTTACTCTC 59.014 47.826 4.92 0.00 0.00 3.20
2939 3106 3.447229 TCTCATAGTGAAATCGGCAGTGA 59.553 43.478 0.00 0.00 0.00 3.41
2941 3108 4.371786 TCATAGTGAAATCGGCAGTGATC 58.628 43.478 0.00 0.00 0.00 2.92
2956 3123 2.025981 AGTGATCCTGCCTTGCATTGTA 60.026 45.455 0.00 0.00 38.13 2.41
2998 4382 8.733458 TCGTTCTTAGCACTACTACTTATGAAA 58.267 33.333 0.00 0.00 0.00 2.69
2999 4383 9.350357 CGTTCTTAGCACTACTACTTATGAAAA 57.650 33.333 0.00 0.00 0.00 2.29
3310 4696 5.582269 CCACTCACTCACTACCAATACAATG 59.418 44.000 0.00 0.00 0.00 2.82
3311 4697 5.063944 CACTCACTCACTACCAATACAATGC 59.936 44.000 0.00 0.00 0.00 3.56
3312 4698 5.159273 TCACTCACTACCAATACAATGCA 57.841 39.130 0.00 0.00 0.00 3.96
3314 4700 6.179756 TCACTCACTACCAATACAATGCAAT 58.820 36.000 0.00 0.00 0.00 3.56
3315 4701 7.334858 TCACTCACTACCAATACAATGCAATA 58.665 34.615 0.00 0.00 0.00 1.90
3317 4703 7.280876 CACTCACTACCAATACAATGCAATAGT 59.719 37.037 0.00 0.00 0.00 2.12
3318 4704 7.829211 ACTCACTACCAATACAATGCAATAGTT 59.171 33.333 0.00 0.00 0.00 2.24
3319 4705 8.574251 TCACTACCAATACAATGCAATAGTTT 57.426 30.769 0.00 0.00 0.00 2.66
3321 4707 9.289303 CACTACCAATACAATGCAATAGTTTTC 57.711 33.333 0.00 0.00 0.00 2.29
3322 4708 8.466798 ACTACCAATACAATGCAATAGTTTTCC 58.533 33.333 0.00 0.00 0.00 3.13
3323 4709 6.639563 ACCAATACAATGCAATAGTTTTCCC 58.360 36.000 0.00 0.00 0.00 3.97
3326 4712 7.278424 CCAATACAATGCAATAGTTTTCCCTTG 59.722 37.037 0.00 0.00 0.00 3.61
3327 4713 5.806654 ACAATGCAATAGTTTTCCCTTGT 57.193 34.783 0.00 0.00 0.00 3.16
3328 4714 6.909550 ACAATGCAATAGTTTTCCCTTGTA 57.090 33.333 0.00 0.00 0.00 2.41
3329 4715 7.296628 ACAATGCAATAGTTTTCCCTTGTAA 57.703 32.000 0.00 0.00 0.00 2.41
3330 4716 7.731054 ACAATGCAATAGTTTTCCCTTGTAAA 58.269 30.769 0.00 0.00 0.00 2.01
3331 4717 8.207545 ACAATGCAATAGTTTTCCCTTGTAAAA 58.792 29.630 0.00 0.00 0.00 1.52
3334 4720 7.957002 TGCAATAGTTTTCCCTTGTAAAATCA 58.043 30.769 0.00 0.00 0.00 2.57
3377 4763 3.473647 CCCGGCCTCTGCATCTGA 61.474 66.667 0.00 0.00 40.13 3.27
3530 4917 1.142060 CACTACCCAAACCACTCACCA 59.858 52.381 0.00 0.00 0.00 4.17
3855 5245 0.796312 CACGGCATGTACAAGGTGAC 59.204 55.000 0.00 0.00 0.00 3.67
3885 5275 3.849951 CCCCATCGGAGACACGGG 61.850 72.222 0.00 0.00 42.51 5.28
3952 5342 3.537874 GTAGATCAGGCGGGCCGT 61.538 66.667 28.82 6.77 41.95 5.68
3997 5388 2.196776 CACCCCAGCATCCCCATC 59.803 66.667 0.00 0.00 0.00 3.51
4002 5393 2.476078 CCAGCATCCCCATCCCCAT 61.476 63.158 0.00 0.00 0.00 4.00
4006 5397 3.195632 ATCCCCATCCCCATGCCC 61.196 66.667 0.00 0.00 0.00 5.36
4007 5398 4.795107 TCCCCATCCCCATGCCCA 62.795 66.667 0.00 0.00 0.00 5.36
4017 5416 0.261402 CCCATGCCCATCCCTTGTAA 59.739 55.000 0.00 0.00 0.00 2.41
4184 5586 0.820482 TCGTCACCGACAAGTGGAGA 60.820 55.000 0.00 0.00 38.40 3.71
4376 5785 5.450376 AAAATGATGCTACGTGTAGTTCG 57.550 39.130 0.00 0.00 35.65 3.95
4512 6232 0.981183 TGTTGTACCGGCAGATCCTT 59.019 50.000 0.00 0.00 0.00 3.36
4575 6295 1.953311 GCCTATGTTGGGAAGGCGAAA 60.953 52.381 0.00 0.00 45.82 3.46
4657 6378 8.314751 TGAGAAATAACCAGACCTAGAAGAAAG 58.685 37.037 0.00 0.00 0.00 2.62
4699 6420 5.716979 TGGTCAGGTTAGGCTAGATAGAAT 58.283 41.667 0.00 0.00 0.00 2.40
4706 6427 8.153550 CAGGTTAGGCTAGATAGAATGAAACAT 58.846 37.037 0.00 0.00 0.00 2.71
4715 6436 3.928727 AGAATGAAACATGGCAGTGTG 57.071 42.857 0.00 0.00 31.49 3.82
4738 6459 0.252479 ACATCTGCCTTGGAGCTCTG 59.748 55.000 14.64 2.87 0.00 3.35
4774 6502 0.179202 CAAACAATGCGGCGAATCGA 60.179 50.000 12.98 0.00 0.00 3.59
4783 6511 1.835121 CGGCGAATCGATCAGTACAA 58.165 50.000 6.91 0.00 0.00 2.41
4791 6519 5.506483 CGAATCGATCAGTACAATCCTCAGT 60.506 44.000 0.00 0.00 0.00 3.41
4803 6539 5.319453 ACAATCCTCAGTGATCAATGTTGT 58.681 37.500 21.49 19.80 0.00 3.32
4805 6541 6.596888 ACAATCCTCAGTGATCAATGTTGTAG 59.403 38.462 21.21 13.09 0.00 2.74
4825 6561 1.133790 GGCATGACATGAAGTTCTGGC 59.866 52.381 19.76 3.07 32.95 4.85
4826 6562 1.814394 GCATGACATGAAGTTCTGGCA 59.186 47.619 19.76 11.66 34.23 4.92
4863 6599 1.078918 CTGCAGCCAACCGAGATGA 60.079 57.895 0.00 0.00 0.00 2.92
5031 6768 6.847956 TTGGAATGCAAAACTGAGAAAATG 57.152 33.333 0.00 0.00 0.00 2.32
5037 6774 4.142491 TGCAAAACTGAGAAAATGTGACGT 60.142 37.500 0.00 0.00 0.00 4.34
5048 6785 7.908082 TGAGAAAATGTGACGTTGTTTCTAAAG 59.092 33.333 4.87 0.00 38.36 1.85
5159 8363 8.907685 GCGAGTAACTAATATCTGAGATTTCAC 58.092 37.037 0.00 0.00 0.00 3.18
5175 8379 5.773176 AGATTTCACACCGGATTAGGTTTTT 59.227 36.000 9.46 0.00 43.00 1.94
5177 8381 3.150767 TCACACCGGATTAGGTTTTTGG 58.849 45.455 9.46 0.00 43.00 3.28
5203 8407 2.040278 TGATTGCAGCCTTGTAGGAAGT 59.960 45.455 0.00 0.00 37.67 3.01
5297 8507 4.456566 GCTGACCCTTTTCGGTGTAAAATA 59.543 41.667 0.00 0.00 35.79 1.40
5374 8606 9.926158 AGAACATGTTGAATTTTAATATGCACA 57.074 25.926 17.58 0.00 32.07 4.57
5377 8609 9.709495 ACATGTTGAATTTTAATATGCACAACT 57.291 25.926 9.56 0.00 37.71 3.16
5381 8613 9.726034 GTTGAATTTTAATATGCACAACTTTCG 57.274 29.630 0.00 0.00 35.20 3.46
5382 8614 7.948137 TGAATTTTAATATGCACAACTTTCGC 58.052 30.769 0.00 0.00 0.00 4.70
5383 8615 7.812191 TGAATTTTAATATGCACAACTTTCGCT 59.188 29.630 0.00 0.00 0.00 4.93
5384 8616 8.532977 AATTTTAATATGCACAACTTTCGCTT 57.467 26.923 0.00 0.00 0.00 4.68
5385 8617 6.926280 TTTAATATGCACAACTTTCGCTTG 57.074 33.333 0.00 0.00 0.00 4.01
5386 8618 2.987413 TATGCACAACTTTCGCTTGG 57.013 45.000 0.00 0.00 0.00 3.61
5387 8619 0.314935 ATGCACAACTTTCGCTTGGG 59.685 50.000 0.00 0.00 0.00 4.12
5388 8620 1.034838 TGCACAACTTTCGCTTGGGT 61.035 50.000 0.00 0.00 0.00 4.51
5390 8622 1.069227 GCACAACTTTCGCTTGGGTAG 60.069 52.381 0.00 0.00 0.00 3.18
5393 8625 0.608308 AACTTTCGCTTGGGTAGGCC 60.608 55.000 0.00 0.00 0.00 5.19
5397 8629 4.832608 CGCTTGGGTAGGCCGGTC 62.833 72.222 0.00 0.00 34.97 4.79
5398 8630 3.712907 GCTTGGGTAGGCCGGTCA 61.713 66.667 9.71 0.00 34.97 4.02
5400 8632 1.607612 CTTGGGTAGGCCGGTCAAT 59.392 57.895 9.71 0.00 34.97 2.57
5401 8633 0.034477 CTTGGGTAGGCCGGTCAATT 60.034 55.000 9.71 0.00 34.97 2.32
5402 8634 1.210967 CTTGGGTAGGCCGGTCAATTA 59.789 52.381 9.71 0.00 34.97 1.40
5404 8636 1.634459 TGGGTAGGCCGGTCAATTAAA 59.366 47.619 9.71 0.00 34.97 1.52
5405 8637 2.294979 GGGTAGGCCGGTCAATTAAAG 58.705 52.381 9.71 0.00 34.97 1.85
5407 8639 2.361789 GTAGGCCGGTCAATTAAAGCA 58.638 47.619 9.71 0.00 0.00 3.91
5409 8641 1.544246 AGGCCGGTCAATTAAAGCAAC 59.456 47.619 9.71 0.00 0.00 4.17
5410 8642 1.271102 GGCCGGTCAATTAAAGCAACA 59.729 47.619 0.00 0.00 0.00 3.33
5411 8643 2.324860 GCCGGTCAATTAAAGCAACAC 58.675 47.619 1.90 0.00 0.00 3.32
5412 8644 2.287909 GCCGGTCAATTAAAGCAACACA 60.288 45.455 1.90 0.00 0.00 3.72
5413 8645 3.797184 GCCGGTCAATTAAAGCAACACAA 60.797 43.478 1.90 0.00 0.00 3.33
5415 8647 4.444056 CCGGTCAATTAAAGCAACACAAAG 59.556 41.667 0.00 0.00 0.00 2.77
5416 8648 5.040635 CGGTCAATTAAAGCAACACAAAGT 58.959 37.500 0.00 0.00 0.00 2.66
5417 8649 5.173131 CGGTCAATTAAAGCAACACAAAGTC 59.827 40.000 0.00 0.00 0.00 3.01
5420 8652 2.376915 TAAAGCAACACAAAGTCGCG 57.623 45.000 0.00 0.00 0.00 5.87
5422 8654 0.304705 AAGCAACACAAAGTCGCGAG 59.695 50.000 10.24 0.00 0.00 5.03
5423 8655 1.722507 GCAACACAAAGTCGCGAGC 60.723 57.895 10.24 1.35 0.00 5.03
5424 8656 1.437089 CAACACAAAGTCGCGAGCG 60.437 57.895 10.24 11.64 41.35 5.03
5467 10595 7.954666 TTTCTTTTCCTATGTTATTCTGGGG 57.045 36.000 0.00 0.00 0.00 4.96
5468 10596 6.652205 TCTTTTCCTATGTTATTCTGGGGT 57.348 37.500 0.00 0.00 0.00 4.95
5469 10597 7.039722 TCTTTTCCTATGTTATTCTGGGGTT 57.960 36.000 0.00 0.00 0.00 4.11
5470 10598 7.475299 TCTTTTCCTATGTTATTCTGGGGTTT 58.525 34.615 0.00 0.00 0.00 3.27
5471 10599 7.614192 TCTTTTCCTATGTTATTCTGGGGTTTC 59.386 37.037 0.00 0.00 0.00 2.78
5472 10600 6.652205 TTCCTATGTTATTCTGGGGTTTCT 57.348 37.500 0.00 0.00 0.00 2.52
5473 10601 7.758820 TTCCTATGTTATTCTGGGGTTTCTA 57.241 36.000 0.00 0.00 0.00 2.10
5474 10602 7.947782 TCCTATGTTATTCTGGGGTTTCTAT 57.052 36.000 0.00 0.00 0.00 1.98
5476 10604 8.787818 TCCTATGTTATTCTGGGGTTTCTATTT 58.212 33.333 0.00 0.00 0.00 1.40
5479 10607 8.893563 ATGTTATTCTGGGGTTTCTATTTTGA 57.106 30.769 0.00 0.00 0.00 2.69
5480 10608 8.893563 TGTTATTCTGGGGTTTCTATTTTGAT 57.106 30.769 0.00 0.00 0.00 2.57
5481 10609 9.320295 TGTTATTCTGGGGTTTCTATTTTGATT 57.680 29.630 0.00 0.00 0.00 2.57
5485 10613 8.491045 TTCTGGGGTTTCTATTTTGATTTTCT 57.509 30.769 0.00 0.00 0.00 2.52
5486 10614 9.594936 TTCTGGGGTTTCTATTTTGATTTTCTA 57.405 29.630 0.00 0.00 0.00 2.10
5487 10615 9.243105 TCTGGGGTTTCTATTTTGATTTTCTAG 57.757 33.333 0.00 0.00 0.00 2.43
5488 10616 9.243105 CTGGGGTTTCTATTTTGATTTTCTAGA 57.757 33.333 0.00 0.00 0.00 2.43
5551 10679 9.438228 TTTTAAAACTTAAGAACCCCTTTTGTG 57.562 29.630 10.09 0.00 36.34 3.33
5552 10680 6.860790 AAAACTTAAGAACCCCTTTTGTGA 57.139 33.333 10.09 0.00 36.34 3.58
5553 10681 6.860790 AAACTTAAGAACCCCTTTTGTGAA 57.139 33.333 10.09 0.00 36.34 3.18
5554 10682 6.860790 AACTTAAGAACCCCTTTTGTGAAA 57.139 33.333 10.09 0.00 36.34 2.69
5555 10683 7.432148 AACTTAAGAACCCCTTTTGTGAAAT 57.568 32.000 10.09 0.00 36.34 2.17
5556 10684 6.816136 ACTTAAGAACCCCTTTTGTGAAATG 58.184 36.000 10.09 0.00 36.34 2.32
5557 10685 6.382859 ACTTAAGAACCCCTTTTGTGAAATGT 59.617 34.615 10.09 0.00 36.34 2.71
5558 10686 5.692115 AAGAACCCCTTTTGTGAAATGTT 57.308 34.783 0.00 0.00 0.00 2.71
5559 10687 6.800072 AAGAACCCCTTTTGTGAAATGTTA 57.200 33.333 0.00 0.00 0.00 2.41
5560 10688 6.405278 AGAACCCCTTTTGTGAAATGTTAG 57.595 37.500 0.00 0.00 0.00 2.34
5561 10689 4.600692 ACCCCTTTTGTGAAATGTTAGC 57.399 40.909 0.00 0.00 0.00 3.09
5562 10690 3.964031 ACCCCTTTTGTGAAATGTTAGCA 59.036 39.130 0.00 0.00 0.00 3.49
5563 10691 4.592778 ACCCCTTTTGTGAAATGTTAGCAT 59.407 37.500 0.00 0.00 36.80 3.79
5564 10692 5.777732 ACCCCTTTTGTGAAATGTTAGCATA 59.222 36.000 0.00 0.00 34.39 3.14
5565 10693 6.440328 ACCCCTTTTGTGAAATGTTAGCATAT 59.560 34.615 0.00 0.00 34.39 1.78
5566 10694 7.038373 ACCCCTTTTGTGAAATGTTAGCATATT 60.038 33.333 0.00 0.00 34.39 1.28
5567 10695 7.823799 CCCCTTTTGTGAAATGTTAGCATATTT 59.176 33.333 0.00 0.00 34.39 1.40
5568 10696 9.218440 CCCTTTTGTGAAATGTTAGCATATTTT 57.782 29.630 0.00 0.00 34.39 1.82
5618 10746 9.793252 ATCAGAGAACATTTATTGAAATTTCGG 57.207 29.630 13.34 0.29 32.73 4.30
5619 10747 9.008965 TCAGAGAACATTTATTGAAATTTCGGA 57.991 29.630 13.34 5.23 32.73 4.55
5620 10748 9.624697 CAGAGAACATTTATTGAAATTTCGGAA 57.375 29.630 13.34 3.74 32.73 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.129320 TCTGTAGGAGTAGTACGTACCATCA 59.871 44.000 21.80 8.59 31.06 3.07
1 2 5.605534 TCTGTAGGAGTAGTACGTACCATC 58.394 45.833 21.80 16.08 31.06 3.51
2 3 5.620738 TCTGTAGGAGTAGTACGTACCAT 57.379 43.478 21.80 8.30 31.06 3.55
3 4 5.363101 CATCTGTAGGAGTAGTACGTACCA 58.637 45.833 21.80 5.84 31.06 3.25
4 5 4.213059 GCATCTGTAGGAGTAGTACGTACC 59.787 50.000 21.80 7.94 31.06 3.34
5 6 4.084641 CGCATCTGTAGGAGTAGTACGTAC 60.085 50.000 18.10 18.10 0.00 3.67
6 7 4.053983 CGCATCTGTAGGAGTAGTACGTA 58.946 47.826 0.00 0.00 0.00 3.57
7 8 2.871022 CGCATCTGTAGGAGTAGTACGT 59.129 50.000 0.00 0.00 0.00 3.57
8 9 2.223611 CCGCATCTGTAGGAGTAGTACG 59.776 54.545 0.00 0.00 0.00 3.67
9 10 3.474600 TCCGCATCTGTAGGAGTAGTAC 58.525 50.000 0.00 0.00 0.00 2.73
10 11 3.741249 CTCCGCATCTGTAGGAGTAGTA 58.259 50.000 12.61 0.00 44.79 1.82
11 12 2.577700 CTCCGCATCTGTAGGAGTAGT 58.422 52.381 12.61 0.00 44.79 2.73
16 17 1.195115 AAAGCTCCGCATCTGTAGGA 58.805 50.000 0.00 0.00 0.00 2.94
17 18 1.667724 CAAAAGCTCCGCATCTGTAGG 59.332 52.381 0.00 0.00 0.00 3.18
18 19 1.063174 GCAAAAGCTCCGCATCTGTAG 59.937 52.381 0.00 0.00 0.00 2.74
19 20 1.086696 GCAAAAGCTCCGCATCTGTA 58.913 50.000 0.00 0.00 0.00 2.74
20 21 0.607489 AGCAAAAGCTCCGCATCTGT 60.607 50.000 4.96 0.00 0.00 3.41
21 22 0.524862 AAGCAAAAGCTCCGCATCTG 59.475 50.000 4.96 0.00 0.00 2.90
22 23 0.524862 CAAGCAAAAGCTCCGCATCT 59.475 50.000 4.96 0.00 0.00 2.90
23 24 1.074872 GCAAGCAAAAGCTCCGCATC 61.075 55.000 4.96 0.00 0.00 3.91
24 25 1.080298 GCAAGCAAAAGCTCCGCAT 60.080 52.632 4.96 0.00 0.00 4.73
25 26 1.808531 ATGCAAGCAAAAGCTCCGCA 61.809 50.000 14.25 14.25 34.33 5.69
26 27 1.074872 GATGCAAGCAAAAGCTCCGC 61.075 55.000 0.00 0.00 0.00 5.54
27 28 0.795735 CGATGCAAGCAAAAGCTCCG 60.796 55.000 0.00 0.00 0.00 4.63
28 29 1.074872 GCGATGCAAGCAAAAGCTCC 61.075 55.000 11.95 0.00 34.19 4.70
29 30 1.074872 GGCGATGCAAGCAAAAGCTC 61.075 55.000 17.43 2.19 36.08 4.09
30 31 1.080298 GGCGATGCAAGCAAAAGCT 60.080 52.632 17.43 0.00 36.08 3.74
31 32 1.074872 GAGGCGATGCAAGCAAAAGC 61.075 55.000 17.43 5.10 36.08 3.51
32 33 0.241749 TGAGGCGATGCAAGCAAAAG 59.758 50.000 17.43 0.00 36.08 2.27
33 34 0.672889 TTGAGGCGATGCAAGCAAAA 59.327 45.000 17.43 7.12 36.08 2.44
34 35 0.672889 TTTGAGGCGATGCAAGCAAA 59.327 45.000 17.43 8.19 36.08 3.68
35 36 0.241749 CTTTGAGGCGATGCAAGCAA 59.758 50.000 17.43 2.97 36.08 3.91
36 37 0.606130 TCTTTGAGGCGATGCAAGCA 60.606 50.000 17.43 0.00 36.08 3.91
37 38 0.523072 TTCTTTGAGGCGATGCAAGC 59.477 50.000 8.80 8.80 0.00 4.01
38 39 2.995466 TTTCTTTGAGGCGATGCAAG 57.005 45.000 0.00 0.00 0.00 4.01
39 40 2.884012 TCTTTTCTTTGAGGCGATGCAA 59.116 40.909 0.00 0.00 0.00 4.08
40 41 2.503331 TCTTTTCTTTGAGGCGATGCA 58.497 42.857 0.00 0.00 0.00 3.96
41 42 3.772060 ATCTTTTCTTTGAGGCGATGC 57.228 42.857 0.00 0.00 0.00 3.91
42 43 6.421801 ACAAAAATCTTTTCTTTGAGGCGATG 59.578 34.615 1.08 0.00 34.76 3.84
43 44 6.515832 ACAAAAATCTTTTCTTTGAGGCGAT 58.484 32.000 1.08 0.00 34.76 4.58
44 45 5.901552 ACAAAAATCTTTTCTTTGAGGCGA 58.098 33.333 1.08 0.00 34.76 5.54
45 46 6.588348 AACAAAAATCTTTTCTTTGAGGCG 57.412 33.333 1.08 0.00 34.76 5.52
46 47 9.920826 CTTAAACAAAAATCTTTTCTTTGAGGC 57.079 29.630 1.08 0.00 34.76 4.70
72 73 9.473640 GGCATACATTTTACTACTACTACCTTC 57.526 37.037 0.00 0.00 0.00 3.46
73 74 8.984855 TGGCATACATTTTACTACTACTACCTT 58.015 33.333 0.00 0.00 0.00 3.50
74 75 8.543293 TGGCATACATTTTACTACTACTACCT 57.457 34.615 0.00 0.00 0.00 3.08
75 76 9.257651 CTTGGCATACATTTTACTACTACTACC 57.742 37.037 0.00 0.00 0.00 3.18
76 77 9.813446 ACTTGGCATACATTTTACTACTACTAC 57.187 33.333 0.00 0.00 0.00 2.73
78 79 7.985752 GGACTTGGCATACATTTTACTACTACT 59.014 37.037 0.00 0.00 0.00 2.57
79 80 7.767198 TGGACTTGGCATACATTTTACTACTAC 59.233 37.037 0.00 0.00 0.00 2.73
80 81 7.853299 TGGACTTGGCATACATTTTACTACTA 58.147 34.615 0.00 0.00 0.00 1.82
81 82 6.717289 TGGACTTGGCATACATTTTACTACT 58.283 36.000 0.00 0.00 0.00 2.57
82 83 6.995511 TGGACTTGGCATACATTTTACTAC 57.004 37.500 0.00 0.00 0.00 2.73
83 84 6.039270 GCATGGACTTGGCATACATTTTACTA 59.961 38.462 0.00 0.00 0.00 1.82
84 85 5.163519 GCATGGACTTGGCATACATTTTACT 60.164 40.000 0.00 0.00 0.00 2.24
85 86 5.043248 GCATGGACTTGGCATACATTTTAC 58.957 41.667 0.00 0.00 0.00 2.01
86 87 4.708909 TGCATGGACTTGGCATACATTTTA 59.291 37.500 0.00 0.00 31.58 1.52
87 88 3.514706 TGCATGGACTTGGCATACATTTT 59.485 39.130 0.00 0.00 31.58 1.82
88 89 3.098377 TGCATGGACTTGGCATACATTT 58.902 40.909 0.00 0.00 31.58 2.32
89 90 2.737544 TGCATGGACTTGGCATACATT 58.262 42.857 0.00 0.00 31.58 2.71
90 91 2.440517 TGCATGGACTTGGCATACAT 57.559 45.000 0.00 0.00 31.58 2.29
91 92 2.212812 TTGCATGGACTTGGCATACA 57.787 45.000 0.00 0.00 37.39 2.29
92 93 3.450578 CATTTGCATGGACTTGGCATAC 58.549 45.455 0.00 0.00 37.39 2.39
93 94 2.159071 GCATTTGCATGGACTTGGCATA 60.159 45.455 0.00 0.00 41.59 3.14
94 95 1.406341 GCATTTGCATGGACTTGGCAT 60.406 47.619 0.00 0.00 41.59 4.40
95 96 0.037139 GCATTTGCATGGACTTGGCA 60.037 50.000 0.00 0.00 41.59 4.92
96 97 2.758497 GCATTTGCATGGACTTGGC 58.242 52.632 0.00 0.00 41.59 4.52
105 106 7.539304 AGAACCATCTTGCTTGCATTTGCAT 62.539 40.000 6.00 0.00 41.42 3.96
106 107 6.307454 AGAACCATCTTGCTTGCATTTGCA 62.307 41.667 0.05 0.05 40.53 4.08
107 108 2.088950 ACCATCTTGCTTGCATTTGC 57.911 45.000 0.00 0.00 42.50 3.68
108 109 3.678072 CAGAACCATCTTGCTTGCATTTG 59.322 43.478 0.00 0.00 32.03 2.32
109 110 3.322828 ACAGAACCATCTTGCTTGCATTT 59.677 39.130 0.00 0.00 32.03 2.32
110 111 2.895404 ACAGAACCATCTTGCTTGCATT 59.105 40.909 0.00 0.00 32.03 3.56
111 112 2.490903 GACAGAACCATCTTGCTTGCAT 59.509 45.455 0.00 0.00 32.03 3.96
112 113 1.881973 GACAGAACCATCTTGCTTGCA 59.118 47.619 0.00 0.00 32.03 4.08
113 114 1.881973 TGACAGAACCATCTTGCTTGC 59.118 47.619 0.00 0.00 32.03 4.01
114 115 3.144506 AGTGACAGAACCATCTTGCTTG 58.855 45.455 0.00 0.00 32.03 4.01
115 116 3.498774 AGTGACAGAACCATCTTGCTT 57.501 42.857 0.00 0.00 32.03 3.91
116 117 3.834813 TCTAGTGACAGAACCATCTTGCT 59.165 43.478 0.00 0.00 32.03 3.91
117 118 4.193826 TCTAGTGACAGAACCATCTTGC 57.806 45.455 0.00 0.00 32.03 4.01
126 127 5.542635 ACCATACCTTGTTCTAGTGACAGAA 59.457 40.000 0.00 0.00 32.11 3.02
127 128 5.084519 ACCATACCTTGTTCTAGTGACAGA 58.915 41.667 0.00 0.00 0.00 3.41
128 129 5.407407 ACCATACCTTGTTCTAGTGACAG 57.593 43.478 0.00 0.00 0.00 3.51
129 130 6.921486 TTACCATACCTTGTTCTAGTGACA 57.079 37.500 0.00 0.00 0.00 3.58
130 131 6.258068 GCATTACCATACCTTGTTCTAGTGAC 59.742 42.308 0.00 0.00 0.00 3.67
131 132 6.070481 TGCATTACCATACCTTGTTCTAGTGA 60.070 38.462 0.00 0.00 0.00 3.41
132 133 6.112734 TGCATTACCATACCTTGTTCTAGTG 58.887 40.000 0.00 0.00 0.00 2.74
133 134 6.308015 TGCATTACCATACCTTGTTCTAGT 57.692 37.500 0.00 0.00 0.00 2.57
134 135 7.472543 GTTTGCATTACCATACCTTGTTCTAG 58.527 38.462 0.00 0.00 0.00 2.43
135 136 6.092944 CGTTTGCATTACCATACCTTGTTCTA 59.907 38.462 0.00 0.00 0.00 2.10
136 137 5.106317 CGTTTGCATTACCATACCTTGTTCT 60.106 40.000 0.00 0.00 0.00 3.01
137 138 5.092781 CGTTTGCATTACCATACCTTGTTC 58.907 41.667 0.00 0.00 0.00 3.18
138 139 4.521256 ACGTTTGCATTACCATACCTTGTT 59.479 37.500 0.00 0.00 0.00 2.83
139 140 4.076394 ACGTTTGCATTACCATACCTTGT 58.924 39.130 0.00 0.00 0.00 3.16
140 141 4.155099 TCACGTTTGCATTACCATACCTTG 59.845 41.667 0.00 0.00 0.00 3.61
141 142 4.328536 TCACGTTTGCATTACCATACCTT 58.671 39.130 0.00 0.00 0.00 3.50
142 143 3.945346 TCACGTTTGCATTACCATACCT 58.055 40.909 0.00 0.00 0.00 3.08
143 144 4.893424 ATCACGTTTGCATTACCATACC 57.107 40.909 0.00 0.00 0.00 2.73
144 145 7.575332 AAAAATCACGTTTGCATTACCATAC 57.425 32.000 0.00 0.00 0.00 2.39
175 176 1.241315 AAACATGTGTGGGCGGTAGC 61.241 55.000 0.00 0.00 44.18 3.58
176 177 2.102070 TAAACATGTGTGGGCGGTAG 57.898 50.000 0.00 0.00 0.00 3.18
177 178 2.152830 GTTAAACATGTGTGGGCGGTA 58.847 47.619 0.00 0.00 0.00 4.02
178 179 0.955905 GTTAAACATGTGTGGGCGGT 59.044 50.000 0.00 0.00 0.00 5.68
179 180 0.242555 GGTTAAACATGTGTGGGCGG 59.757 55.000 0.00 0.00 0.00 6.13
180 181 0.955178 TGGTTAAACATGTGTGGGCG 59.045 50.000 0.00 0.00 0.00 6.13
181 182 1.000394 GGTGGTTAAACATGTGTGGGC 60.000 52.381 0.00 0.00 0.00 5.36
182 183 1.268352 CGGTGGTTAAACATGTGTGGG 59.732 52.381 0.00 0.00 0.00 4.61
183 184 1.268352 CCGGTGGTTAAACATGTGTGG 59.732 52.381 0.00 0.00 0.00 4.17
184 185 1.335506 GCCGGTGGTTAAACATGTGTG 60.336 52.381 1.90 0.00 0.00 3.82
185 186 0.955905 GCCGGTGGTTAAACATGTGT 59.044 50.000 1.90 0.00 0.00 3.72
186 187 0.109964 CGCCGGTGGTTAAACATGTG 60.110 55.000 7.26 0.00 0.00 3.21
187 188 1.858372 GCGCCGGTGGTTAAACATGT 61.858 55.000 18.41 0.00 0.00 3.21
188 189 1.154112 GCGCCGGTGGTTAAACATG 60.154 57.895 18.41 0.00 0.00 3.21
189 190 2.337246 GGCGCCGGTGGTTAAACAT 61.337 57.895 18.41 0.00 0.00 2.71
190 191 2.979120 GGCGCCGGTGGTTAAACA 60.979 61.111 18.41 0.00 0.00 2.83
191 192 2.973316 CTGGCGCCGGTGGTTAAAC 61.973 63.158 27.83 0.00 0.00 2.01
192 193 2.670251 CTGGCGCCGGTGGTTAAA 60.670 61.111 27.83 1.51 0.00 1.52
193 194 4.708386 CCTGGCGCCGGTGGTTAA 62.708 66.667 32.63 6.59 0.00 2.01
201 202 4.260355 CATGCATTCCTGGCGCCG 62.260 66.667 23.90 16.52 0.00 6.46
202 203 2.829914 TCATGCATTCCTGGCGCC 60.830 61.111 22.73 22.73 0.00 6.53
203 204 2.410469 GTCATGCATTCCTGGCGC 59.590 61.111 0.00 0.00 0.00 6.53
204 205 2.711311 CGTCATGCATTCCTGGCG 59.289 61.111 0.00 0.00 33.84 5.69
205 206 2.410469 GCGTCATGCATTCCTGGC 59.590 61.111 0.00 0.00 45.45 4.85
237 238 4.554363 CTCCTACGTGGCGCCTCG 62.554 72.222 40.17 40.17 38.64 4.63
238 239 4.874977 GCTCCTACGTGGCGCCTC 62.875 72.222 29.70 23.91 40.51 4.70
370 381 1.450312 CGTGGAGGAGACAATGGCC 60.450 63.158 0.00 0.00 0.00 5.36
371 382 0.741221 GACGTGGAGGAGACAATGGC 60.741 60.000 0.00 0.00 0.00 4.40
372 383 0.898320 AGACGTGGAGGAGACAATGG 59.102 55.000 0.00 0.00 0.00 3.16
373 384 1.134965 GGAGACGTGGAGGAGACAATG 60.135 57.143 0.00 0.00 0.00 2.82
374 385 1.187087 GGAGACGTGGAGGAGACAAT 58.813 55.000 0.00 0.00 0.00 2.71
393 404 4.653341 AGAGAGAGAGAGAGAGAGAGAAGG 59.347 50.000 0.00 0.00 0.00 3.46
396 407 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
398 409 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
399 410 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
400 411 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
401 412 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
402 413 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
403 414 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
404 415 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
405 416 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
406 417 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
407 418 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
408 419 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
409 420 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
410 421 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
411 422 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
412 423 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
413 424 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
414 425 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
415 426 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
416 427 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
417 428 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
418 429 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
419 430 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
420 431 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
421 432 5.604758 TTGAGAGAGAGAGAGAGAGAGAG 57.395 47.826 0.00 0.00 0.00 3.20
422 433 5.104776 CCTTTGAGAGAGAGAGAGAGAGAGA 60.105 48.000 0.00 0.00 0.00 3.10
423 434 5.121811 CCTTTGAGAGAGAGAGAGAGAGAG 58.878 50.000 0.00 0.00 0.00 3.20
424 435 4.626287 GCCTTTGAGAGAGAGAGAGAGAGA 60.626 50.000 0.00 0.00 0.00 3.10
425 436 3.629398 GCCTTTGAGAGAGAGAGAGAGAG 59.371 52.174 0.00 0.00 0.00 3.20
426 437 3.010027 TGCCTTTGAGAGAGAGAGAGAGA 59.990 47.826 0.00 0.00 0.00 3.10
427 438 3.355378 TGCCTTTGAGAGAGAGAGAGAG 58.645 50.000 0.00 0.00 0.00 3.20
428 439 3.010027 TCTGCCTTTGAGAGAGAGAGAGA 59.990 47.826 0.00 0.00 0.00 3.10
429 440 3.355378 TCTGCCTTTGAGAGAGAGAGAG 58.645 50.000 0.00 0.00 0.00 3.20
430 441 3.355378 CTCTGCCTTTGAGAGAGAGAGA 58.645 50.000 0.00 0.00 39.58 3.10
431 442 2.428171 CCTCTGCCTTTGAGAGAGAGAG 59.572 54.545 0.00 0.00 39.58 3.20
432 443 2.042297 TCCTCTGCCTTTGAGAGAGAGA 59.958 50.000 0.00 0.00 39.58 3.10
433 444 2.455557 TCCTCTGCCTTTGAGAGAGAG 58.544 52.381 0.00 0.00 39.58 3.20
434 445 2.612285 TCCTCTGCCTTTGAGAGAGA 57.388 50.000 0.00 0.00 39.58 3.10
435 446 2.677613 GCTTCCTCTGCCTTTGAGAGAG 60.678 54.545 0.00 0.00 39.58 3.20
436 447 1.277557 GCTTCCTCTGCCTTTGAGAGA 59.722 52.381 0.00 0.00 39.58 3.10
437 448 1.002888 TGCTTCCTCTGCCTTTGAGAG 59.997 52.381 0.00 0.00 37.33 3.20
438 449 1.059098 TGCTTCCTCTGCCTTTGAGA 58.941 50.000 0.00 0.00 33.68 3.27
439 450 1.811359 CTTGCTTCCTCTGCCTTTGAG 59.189 52.381 0.00 0.00 0.00 3.02
440 451 1.421268 TCTTGCTTCCTCTGCCTTTGA 59.579 47.619 0.00 0.00 0.00 2.69
441 452 1.811359 CTCTTGCTTCCTCTGCCTTTG 59.189 52.381 0.00 0.00 0.00 2.77
442 453 1.271817 CCTCTTGCTTCCTCTGCCTTT 60.272 52.381 0.00 0.00 0.00 3.11
443 454 0.327591 CCTCTTGCTTCCTCTGCCTT 59.672 55.000 0.00 0.00 0.00 4.35
444 455 0.546267 TCCTCTTGCTTCCTCTGCCT 60.546 55.000 0.00 0.00 0.00 4.75
445 456 0.392327 GTCCTCTTGCTTCCTCTGCC 60.392 60.000 0.00 0.00 0.00 4.85
446 457 0.322975 TGTCCTCTTGCTTCCTCTGC 59.677 55.000 0.00 0.00 0.00 4.26
447 458 1.622811 AGTGTCCTCTTGCTTCCTCTG 59.377 52.381 0.00 0.00 0.00 3.35
560 611 1.137194 CGATACACACGTACGGCCA 59.863 57.895 21.06 0.00 0.00 5.36
569 620 1.156736 AACAAGCAGCCGATACACAC 58.843 50.000 0.00 0.00 0.00 3.82
579 630 2.187599 ATCGCCGTCAAACAAGCAGC 62.188 55.000 0.00 0.00 0.00 5.25
582 633 1.052287 CAAATCGCCGTCAAACAAGC 58.948 50.000 0.00 0.00 0.00 4.01
587 638 2.558821 CGCCAAATCGCCGTCAAA 59.441 55.556 0.00 0.00 0.00 2.69
777 861 0.690762 ACCGACCACTAGTTTGCCAT 59.309 50.000 0.00 0.00 0.00 4.40
778 862 1.274167 CTACCGACCACTAGTTTGCCA 59.726 52.381 0.00 0.00 0.00 4.92
783 867 0.524862 CGCACTACCGACCACTAGTT 59.475 55.000 0.00 0.00 0.00 2.24
820 904 1.492319 GGACACGCACACGCTTTGTA 61.492 55.000 0.00 0.00 45.53 2.41
1101 1215 2.487986 CCTCTGCTGTTTCTTCTTGGGT 60.488 50.000 0.00 0.00 0.00 4.51
1475 1597 5.106515 GGCTCAAGAAAAACAGAGTATCCAC 60.107 44.000 0.00 0.00 33.66 4.02
1686 1816 4.864806 CACTGTGTGACACATACTGATACC 59.135 45.833 19.77 0.00 43.71 2.73
1740 1870 6.015095 TCTGAAGTGAGAATGAAACTAGCTGA 60.015 38.462 0.00 0.00 0.00 4.26
1741 1871 6.090628 GTCTGAAGTGAGAATGAAACTAGCTG 59.909 42.308 0.00 0.00 0.00 4.24
1755 1885 3.312828 CTTTCTGACGGTCTGAAGTGAG 58.687 50.000 23.51 17.14 36.07 3.51
1845 1976 3.803368 GCCAATTTTCTTGGGGAGTGTTG 60.803 47.826 6.16 0.00 39.90 3.33
1846 1977 2.368548 GCCAATTTTCTTGGGGAGTGTT 59.631 45.455 6.16 0.00 39.90 3.32
1874 2005 7.228706 CCAGAACTAGTTCACACCATTAACTTT 59.771 37.037 31.80 8.16 41.84 2.66
1875 2011 6.710744 CCAGAACTAGTTCACACCATTAACTT 59.289 38.462 31.80 8.56 41.84 2.66
1969 2107 9.666626 CCTTTATTCTTCACTGACTATACTACG 57.333 37.037 0.00 0.00 0.00 3.51
1970 2108 9.968870 CCCTTTATTCTTCACTGACTATACTAC 57.031 37.037 0.00 0.00 0.00 2.73
1971 2109 9.710818 ACCCTTTATTCTTCACTGACTATACTA 57.289 33.333 0.00 0.00 0.00 1.82
2088 2227 3.691049 TGTTCTTGCAACCTTTTCTCG 57.309 42.857 0.00 0.00 0.00 4.04
2122 2261 0.548031 TCAGATTCATGTCCCCAGGC 59.452 55.000 0.00 0.00 0.00 4.85
2124 2263 1.142465 CCCTCAGATTCATGTCCCCAG 59.858 57.143 0.00 0.00 0.00 4.45
2126 2265 1.216990 ACCCTCAGATTCATGTCCCC 58.783 55.000 0.00 0.00 0.00 4.81
2127 2266 2.104963 GGTACCCTCAGATTCATGTCCC 59.895 54.545 0.00 0.00 0.00 4.46
2131 2270 2.430694 TGACGGTACCCTCAGATTCATG 59.569 50.000 9.29 0.00 0.00 3.07
2132 2271 2.695666 CTGACGGTACCCTCAGATTCAT 59.304 50.000 27.65 0.00 36.75 2.57
2146 2286 8.466617 AGTATATCTCATTTAGAACTGACGGT 57.533 34.615 0.00 0.00 37.89 4.83
2181 2321 9.270640 GCTATACATCAGATTCTGAAAGTGATT 57.729 33.333 24.21 15.73 44.04 2.57
2221 2362 1.892819 CGTCTGTCCTCCTGCACCAT 61.893 60.000 0.00 0.00 0.00 3.55
2359 2500 1.202879 GGGAACTTGGTGATGGTGTCA 60.203 52.381 0.00 0.00 0.00 3.58
2396 2537 0.539518 TTATGCACCGGCTAAGCTGA 59.460 50.000 0.00 0.00 41.91 4.26
2482 2626 1.668826 TGTGAGGTCTAGGGGCAATT 58.331 50.000 0.00 0.00 0.00 2.32
2565 2732 3.931578 ACAACAGCATCAGAGACTAACC 58.068 45.455 0.00 0.00 0.00 2.85
2630 2797 3.630769 CCCACTATAGCGTCTAGTCAACA 59.369 47.826 0.00 0.00 0.00 3.33
2729 2896 5.246307 AGTTCCTGTTTGTTCTAGGTATGC 58.754 41.667 0.00 0.00 33.30 3.14
2918 3085 3.785486 TCACTGCCGATTTCACTATGAG 58.215 45.455 0.00 0.00 0.00 2.90
2919 3086 3.885724 TCACTGCCGATTTCACTATGA 57.114 42.857 0.00 0.00 0.00 2.15
2920 3087 3.496130 GGATCACTGCCGATTTCACTATG 59.504 47.826 0.00 0.00 0.00 2.23
2921 3088 3.389329 AGGATCACTGCCGATTTCACTAT 59.611 43.478 0.00 0.00 0.00 2.12
2924 3091 1.667724 CAGGATCACTGCCGATTTCAC 59.332 52.381 0.00 0.00 40.97 3.18
2939 3106 4.888326 TTTTTACAATGCAAGGCAGGAT 57.112 36.364 0.00 0.00 43.65 3.24
3188 4574 1.447489 CTCAGCTGTCGCCTTGGAG 60.447 63.158 14.67 0.00 36.60 3.86
3310 4696 9.435688 AATGATTTTACAAGGGAAAACTATTGC 57.564 29.630 0.00 0.00 0.00 3.56
3353 4739 4.181010 CAGAGGCCGGGGGTCATG 62.181 72.222 2.18 0.00 0.00 3.07
3377 4763 0.833287 AAGTGGCCGTATGCATCTCT 59.167 50.000 0.19 0.00 43.89 3.10
3530 4917 2.231235 CCGGCTTTTGATGTTAGGCTTT 59.769 45.455 0.00 0.00 32.77 3.51
3722 5111 1.073897 GCAGGAGGAGGTTGCTGTT 59.926 57.895 0.00 0.00 38.61 3.16
3952 5342 0.108585 GCTTGTCTGGTTCCTGGTGA 59.891 55.000 0.00 0.00 0.00 4.02
3997 5388 1.654137 TACAAGGGATGGGCATGGGG 61.654 60.000 0.00 0.00 0.00 4.96
4002 5393 3.464720 TGATTTTACAAGGGATGGGCA 57.535 42.857 0.00 0.00 0.00 5.36
4006 5397 8.517878 GTCCATATCATGATTTTACAAGGGATG 58.482 37.037 14.65 7.11 0.00 3.51
4007 5398 8.226810 TGTCCATATCATGATTTTACAAGGGAT 58.773 33.333 14.65 0.00 0.00 3.85
4017 5416 8.859236 ATCTCGAAATGTCCATATCATGATTT 57.141 30.769 14.65 2.68 0.00 2.17
4037 5436 7.721286 AAAAATTCAGGATAGTGCTATCTCG 57.279 36.000 16.07 9.44 41.20 4.04
4184 5586 6.662234 TCTTGATCTGCCTCTTCATGAATTTT 59.338 34.615 8.96 0.00 0.00 1.82
4512 6232 1.400494 TCATTCGCTTCGATCTCGTCA 59.600 47.619 0.00 0.00 40.80 4.35
4657 6378 5.048504 TGACCATCTTCATCTTGCTTTGTTC 60.049 40.000 0.00 0.00 0.00 3.18
4699 6420 1.794151 CGCCACACTGCCATGTTTCA 61.794 55.000 0.00 0.00 0.00 2.69
4706 6427 2.358615 GATGTCGCCACACTGCCA 60.359 61.111 0.00 0.00 34.48 4.92
4738 6459 1.544724 TTGGCCAACTAACTGGATGC 58.455 50.000 16.05 0.00 38.96 3.91
4774 6502 6.550938 TTGATCACTGAGGATTGTACTGAT 57.449 37.500 0.00 0.00 0.00 2.90
4783 6511 5.678583 CCTACAACATTGATCACTGAGGAT 58.321 41.667 18.94 4.97 0.00 3.24
4791 6519 4.587891 TGTCATGCCTACAACATTGATCA 58.412 39.130 0.00 0.00 0.00 2.92
4803 6539 3.877559 CCAGAACTTCATGTCATGCCTA 58.122 45.455 8.03 0.00 0.00 3.93
4805 6541 1.133790 GCCAGAACTTCATGTCATGCC 59.866 52.381 8.03 0.00 0.00 4.40
4825 6561 3.817647 CAGTGTTCTTCTCCCTTCCTTTG 59.182 47.826 0.00 0.00 0.00 2.77
4826 6562 3.748989 GCAGTGTTCTTCTCCCTTCCTTT 60.749 47.826 0.00 0.00 0.00 3.11
4999 6736 7.901029 TCAGTTTTGCATTCCAAACCATATTA 58.099 30.769 7.87 0.00 42.81 0.98
5031 6768 6.256321 TGTCCTTACTTTAGAAACAACGTCAC 59.744 38.462 0.00 0.00 0.00 3.67
5037 6774 5.180492 CGGCATGTCCTTACTTTAGAAACAA 59.820 40.000 0.00 0.00 0.00 2.83
5048 6785 1.398390 CTTTGAGCGGCATGTCCTTAC 59.602 52.381 1.45 0.00 0.00 2.34
5146 8350 4.494091 AATCCGGTGTGAAATCTCAGAT 57.506 40.909 0.00 0.00 30.14 2.90
5159 8363 4.594123 AAACCAAAAACCTAATCCGGTG 57.406 40.909 0.00 0.00 37.36 4.94
5161 8365 6.518208 TCATAAACCAAAAACCTAATCCGG 57.482 37.500 0.00 0.00 0.00 5.14
5175 8379 3.164268 ACAAGGCTGCAATCATAAACCA 58.836 40.909 0.50 0.00 0.00 3.67
5177 8381 4.640201 TCCTACAAGGCTGCAATCATAAAC 59.360 41.667 0.50 0.00 34.61 2.01
5203 8407 0.755079 CTCGCATCCATTCCTCTCCA 59.245 55.000 0.00 0.00 0.00 3.86
5251 8456 4.340097 CCTCCGTGATTAATTTTAACCCCC 59.660 45.833 0.00 0.00 0.00 5.40
5256 8464 5.355910 GGTCAGCCTCCGTGATTAATTTTAA 59.644 40.000 0.00 0.00 0.00 1.52
5258 8466 3.694566 GGTCAGCCTCCGTGATTAATTTT 59.305 43.478 0.00 0.00 0.00 1.82
5259 8467 3.279434 GGTCAGCCTCCGTGATTAATTT 58.721 45.455 0.00 0.00 0.00 1.82
5260 8468 2.421529 GGGTCAGCCTCCGTGATTAATT 60.422 50.000 0.00 0.00 34.45 1.40
5261 8469 1.141053 GGGTCAGCCTCCGTGATTAAT 59.859 52.381 0.00 0.00 34.45 1.40
5262 8470 0.539986 GGGTCAGCCTCCGTGATTAA 59.460 55.000 0.00 0.00 34.45 1.40
5263 8471 0.325296 AGGGTCAGCCTCCGTGATTA 60.325 55.000 0.00 0.00 34.45 1.75
5371 8603 1.535462 CCTACCCAAGCGAAAGTTGTG 59.465 52.381 0.00 0.00 0.00 3.33
5372 8604 1.892209 CCTACCCAAGCGAAAGTTGT 58.108 50.000 0.00 0.00 0.00 3.32
5373 8605 0.521735 GCCTACCCAAGCGAAAGTTG 59.478 55.000 0.00 0.00 0.00 3.16
5374 8606 0.608308 GGCCTACCCAAGCGAAAGTT 60.608 55.000 0.00 0.00 0.00 2.66
5375 8607 1.002502 GGCCTACCCAAGCGAAAGT 60.003 57.895 0.00 0.00 0.00 2.66
5376 8608 2.106683 CGGCCTACCCAAGCGAAAG 61.107 63.158 0.00 0.00 0.00 2.62
5377 8609 2.046700 CGGCCTACCCAAGCGAAA 60.047 61.111 0.00 0.00 0.00 3.46
5380 8612 4.832608 GACCGGCCTACCCAAGCG 62.833 72.222 0.00 0.00 0.00 4.68
5381 8613 2.552231 ATTGACCGGCCTACCCAAGC 62.552 60.000 0.00 0.00 0.00 4.01
5382 8614 0.034477 AATTGACCGGCCTACCCAAG 60.034 55.000 0.00 0.00 0.00 3.61
5383 8615 1.287217 TAATTGACCGGCCTACCCAA 58.713 50.000 0.00 0.00 0.00 4.12
5384 8616 1.287217 TTAATTGACCGGCCTACCCA 58.713 50.000 0.00 0.00 0.00 4.51
5385 8617 2.294979 CTTTAATTGACCGGCCTACCC 58.705 52.381 0.00 0.00 0.00 3.69
5386 8618 1.674441 GCTTTAATTGACCGGCCTACC 59.326 52.381 0.00 0.00 0.00 3.18
5387 8619 2.361789 TGCTTTAATTGACCGGCCTAC 58.638 47.619 0.00 0.00 0.00 3.18
5388 8620 2.750712 GTTGCTTTAATTGACCGGCCTA 59.249 45.455 0.00 0.00 0.00 3.93
5390 8622 1.271102 TGTTGCTTTAATTGACCGGCC 59.729 47.619 0.00 0.00 0.00 6.13
5393 8625 5.040635 ACTTTGTGTTGCTTTAATTGACCG 58.959 37.500 0.00 0.00 0.00 4.79
5407 8639 1.548973 CTCGCTCGCGACTTTGTGTT 61.549 55.000 3.71 0.00 44.01 3.32
5409 8641 2.765785 CTCGCTCGCGACTTTGTG 59.234 61.111 3.71 1.79 44.01 3.33
5410 8642 3.106407 GCTCGCTCGCGACTTTGT 61.106 61.111 3.71 0.00 44.01 2.83
5411 8643 2.783064 GAGCTCGCTCGCGACTTTG 61.783 63.158 3.71 0.00 44.01 2.77
5412 8644 1.645704 TAGAGCTCGCTCGCGACTTT 61.646 55.000 3.71 10.14 46.90 2.66
5413 8645 2.042520 CTAGAGCTCGCTCGCGACTT 62.043 60.000 3.71 1.21 46.90 3.01
5415 8647 2.052590 CTAGAGCTCGCTCGCGAC 60.053 66.667 3.71 7.70 46.90 5.19
5416 8648 3.943034 GCTAGAGCTCGCTCGCGA 61.943 66.667 9.26 9.26 46.90 5.87
5441 8673 8.811994 CCCCAGAATAACATAGGAAAAGAAAAA 58.188 33.333 0.00 0.00 0.00 1.94
5442 8674 7.953493 ACCCCAGAATAACATAGGAAAAGAAAA 59.047 33.333 0.00 0.00 0.00 2.29
5444 8676 7.039722 ACCCCAGAATAACATAGGAAAAGAA 57.960 36.000 0.00 0.00 0.00 2.52
5445 8677 6.652205 ACCCCAGAATAACATAGGAAAAGA 57.348 37.500 0.00 0.00 0.00 2.52
5446 8678 7.615757 AGAAACCCCAGAATAACATAGGAAAAG 59.384 37.037 0.00 0.00 0.00 2.27
5447 8679 7.475299 AGAAACCCCAGAATAACATAGGAAAA 58.525 34.615 0.00 0.00 0.00 2.29
5448 8680 7.039722 AGAAACCCCAGAATAACATAGGAAA 57.960 36.000 0.00 0.00 0.00 3.13
5449 8681 6.652205 AGAAACCCCAGAATAACATAGGAA 57.348 37.500 0.00 0.00 0.00 3.36
5450 8682 7.947782 ATAGAAACCCCAGAATAACATAGGA 57.052 36.000 0.00 0.00 0.00 2.94
5451 8683 8.996651 AAATAGAAACCCCAGAATAACATAGG 57.003 34.615 0.00 0.00 0.00 2.57
5527 10655 8.363761 TCACAAAAGGGGTTCTTAAGTTTTAA 57.636 30.769 1.63 0.00 34.78 1.52
5532 10660 6.382859 ACATTTCACAAAAGGGGTTCTTAAGT 59.617 34.615 1.63 0.00 34.78 2.24
5533 10661 6.816136 ACATTTCACAAAAGGGGTTCTTAAG 58.184 36.000 0.00 0.00 34.78 1.85
5534 10662 6.800072 ACATTTCACAAAAGGGGTTCTTAA 57.200 33.333 0.00 0.00 34.78 1.85
5535 10663 6.800072 AACATTTCACAAAAGGGGTTCTTA 57.200 33.333 0.00 0.00 34.78 2.10
5536 10664 5.692115 AACATTTCACAAAAGGGGTTCTT 57.308 34.783 0.00 0.00 37.28 2.52
5537 10665 5.221441 GCTAACATTTCACAAAAGGGGTTCT 60.221 40.000 0.00 0.00 30.53 3.01
5538 10666 4.988540 GCTAACATTTCACAAAAGGGGTTC 59.011 41.667 0.00 0.00 30.53 3.62
5539 10667 4.407296 TGCTAACATTTCACAAAAGGGGTT 59.593 37.500 0.00 0.00 30.53 4.11
5540 10668 3.964031 TGCTAACATTTCACAAAAGGGGT 59.036 39.130 0.00 0.00 30.53 4.95
5541 10669 4.599047 TGCTAACATTTCACAAAAGGGG 57.401 40.909 0.00 0.00 30.53 4.79
5542 10670 8.776376 AAATATGCTAACATTTCACAAAAGGG 57.224 30.769 0.00 0.00 37.74 3.95
5592 10720 9.793252 CCGAAATTTCAATAAATGTTCTCTGAT 57.207 29.630 17.99 0.00 35.46 2.90
5593 10721 9.008965 TCCGAAATTTCAATAAATGTTCTCTGA 57.991 29.630 17.99 0.00 35.46 3.27
5594 10722 9.624697 TTCCGAAATTTCAATAAATGTTCTCTG 57.375 29.630 17.99 0.00 35.46 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.