Multiple sequence alignment - TraesCS7A01G556500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G556500 chr7A 100.000 3109 0 0 1 3109 727786917 727790025 0.000000e+00 5742.0
1 TraesCS7A01G556500 chr7A 90.765 693 45 8 1766 2440 727774510 727775201 0.000000e+00 907.0
2 TraesCS7A01G556500 chr7A 90.199 653 61 1 1080 1729 727773641 727774293 0.000000e+00 848.0
3 TraesCS7A01G556500 chr7A 93.827 324 20 0 635 958 90267538 90267215 3.600000e-134 488.0
4 TraesCS7A01G556500 chr7A 86.194 268 25 6 343 605 727773248 727773508 2.360000e-71 279.0
5 TraesCS7A01G556500 chr7A 81.410 312 34 10 2784 3081 727776247 727776548 1.860000e-57 233.0
6 TraesCS7A01G556500 chr7A 82.500 240 26 7 128 362 727772993 727773221 2.450000e-46 196.0
7 TraesCS7A01G556500 chr7A 80.583 103 15 4 3005 3106 727602973 727603071 1.200000e-09 75.0
8 TraesCS7A01G556500 chr7A 100.000 29 0 0 323 351 727586545 727586573 2.000000e-03 54.7
9 TraesCS7A01G556500 chr7D 89.001 1691 154 18 996 2669 638288603 638286928 0.000000e+00 2063.0
10 TraesCS7A01G556500 chr7D 87.995 808 65 16 963 1766 638297052 638296273 0.000000e+00 926.0
11 TraesCS7A01G556500 chr7D 95.148 371 13 2 2739 3109 638286660 638286295 5.780000e-162 580.0
12 TraesCS7A01G556500 chr7D 86.061 495 40 13 124 605 638297568 638297090 3.580000e-139 505.0
13 TraesCS7A01G556500 chr7D 83.640 489 38 16 130 605 638289068 638288609 3.710000e-114 422.0
14 TraesCS7A01G556500 chr7D 94.650 243 12 1 2733 2975 638295170 638294929 2.930000e-100 375.0
15 TraesCS7A01G556500 chr7D 78.120 617 101 17 989 1590 638274535 638273938 8.200000e-96 361.0
16 TraesCS7A01G556500 chr7D 85.852 311 29 8 1929 2225 638296184 638295875 1.800000e-82 316.0
17 TraesCS7A01G556500 chr7D 88.384 198 22 1 2373 2570 638295666 638295470 1.440000e-58 237.0
18 TraesCS7A01G556500 chr7D 89.610 77 4 2 2563 2639 638295450 638295378 9.180000e-16 95.3
19 TraesCS7A01G556500 chr7D 82.474 97 12 4 3011 3106 638335847 638335755 2.570000e-11 80.5
20 TraesCS7A01G556500 chr7D 100.000 32 0 0 1814 1845 638287838 638287869 3.350000e-05 60.2
21 TraesCS7A01G556500 chr7B 91.047 793 60 6 984 1766 734407634 734408425 0.000000e+00 1061.0
22 TraesCS7A01G556500 chr7B 94.164 377 18 2 2733 3109 734410038 734410410 3.480000e-159 571.0
23 TraesCS7A01G556500 chr7B 81.502 719 105 20 987 1685 734379328 734380038 1.620000e-157 566.0
24 TraesCS7A01G556500 chr7B 83.774 567 55 19 2099 2640 734409086 734409640 1.290000e-138 503.0
25 TraesCS7A01G556500 chr7B 79.538 606 102 12 989 1590 734426393 734426980 2.230000e-111 412.0
26 TraesCS7A01G556500 chr7B 81.621 506 38 15 124 605 734407113 734407587 4.900000e-98 368.0
27 TraesCS7A01G556500 chr7B 76.190 525 94 23 1185 1707 734366216 734366711 6.660000e-62 248.0
28 TraesCS7A01G556500 chr7B 88.820 161 18 0 1430 1590 734417022 734417182 6.800000e-47 198.0
29 TraesCS7A01G556500 chr7B 97.368 38 0 1 2469 2505 679930116 679930153 2.590000e-06 63.9
30 TraesCS7A01G556500 chr7B 100.000 29 0 0 323 351 734365724 734365752 2.000000e-03 54.7
31 TraesCS7A01G556500 chr4D 94.817 328 16 1 637 964 46045231 46044905 7.690000e-141 510.0
32 TraesCS7A01G556500 chr4D 94.207 328 18 1 637 964 275788299 275788625 1.660000e-137 499.0
33 TraesCS7A01G556500 chr2A 92.988 328 22 1 637 964 408215798 408216124 7.800000e-131 477.0
34 TraesCS7A01G556500 chr5A 93.210 324 21 1 641 964 585713417 585713739 2.810000e-130 475.0
35 TraesCS7A01G556500 chr5A 92.378 328 24 1 634 960 121042891 121043218 1.690000e-127 466.0
36 TraesCS7A01G556500 chr5A 87.097 62 5 3 2446 2505 454397720 454397780 2.000000e-07 67.6
37 TraesCS7A01G556500 chr6A 92.661 327 23 1 638 964 541289672 541289997 1.310000e-128 470.0
38 TraesCS7A01G556500 chr6A 87.097 62 5 3 2446 2505 41580139 41580199 2.000000e-07 67.6
39 TraesCS7A01G556500 chr3A 92.401 329 24 1 637 964 714233487 714233159 4.690000e-128 468.0
40 TraesCS7A01G556500 chr4A 91.066 347 28 3 621 965 126104416 126104071 1.690000e-127 466.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G556500 chr7A 727786917 727790025 3108 False 5742.000000 5742 100.000000 1 3109 1 chr7A.!!$F3 3108
1 TraesCS7A01G556500 chr7A 727772993 727776548 3555 False 492.600000 907 86.213600 128 3081 5 chr7A.!!$F4 2953
2 TraesCS7A01G556500 chr7D 638286295 638289068 2773 True 1021.666667 2063 89.263000 130 3109 3 chr7D.!!$R3 2979
3 TraesCS7A01G556500 chr7D 638294929 638297568 2639 True 409.050000 926 88.758667 124 2975 6 chr7D.!!$R4 2851
4 TraesCS7A01G556500 chr7D 638273938 638274535 597 True 361.000000 361 78.120000 989 1590 1 chr7D.!!$R1 601
5 TraesCS7A01G556500 chr7B 734407113 734410410 3297 False 625.750000 1061 87.651500 124 3109 4 chr7B.!!$F6 2985
6 TraesCS7A01G556500 chr7B 734379328 734380038 710 False 566.000000 566 81.502000 987 1685 1 chr7B.!!$F2 698
7 TraesCS7A01G556500 chr7B 734426393 734426980 587 False 412.000000 412 79.538000 989 1590 1 chr7B.!!$F4 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.036164 TGGAGCACGGCAAATGTAGT 59.964 50.0 0.0 0.0 0.0 2.73 F
1059 1183 0.108585 GTCCACAGTCCACACACCAT 59.891 55.0 0.0 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 2397 0.313672 TTTTGCTGGGTCGAATGCAC 59.686 50.0 0.0 0.0 35.01 4.57 R
2603 3323 0.035439 TTCTTCCCCGACCAGATTGC 60.035 55.0 0.0 0.0 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.402798 TGTACCATGGCAAATATAGTTTATGG 57.597 34.615 13.04 14.36 39.66 2.74
28 29 8.221251 TGTACCATGGCAAATATAGTTTATGGA 58.779 33.333 13.04 7.52 37.75 3.41
29 30 7.765695 ACCATGGCAAATATAGTTTATGGAG 57.234 36.000 13.04 3.65 37.75 3.86
30 31 6.209391 ACCATGGCAAATATAGTTTATGGAGC 59.791 38.462 13.04 5.30 37.75 4.70
31 32 6.209192 CCATGGCAAATATAGTTTATGGAGCA 59.791 38.462 0.00 0.00 36.75 4.26
32 33 6.633500 TGGCAAATATAGTTTATGGAGCAC 57.367 37.500 0.00 0.00 0.00 4.40
33 34 5.238432 TGGCAAATATAGTTTATGGAGCACG 59.762 40.000 0.00 0.00 0.00 5.34
34 35 5.334879 GGCAAATATAGTTTATGGAGCACGG 60.335 44.000 0.00 0.00 0.00 4.94
35 36 5.689819 CAAATATAGTTTATGGAGCACGGC 58.310 41.667 0.00 0.00 0.00 5.68
36 37 4.617253 ATATAGTTTATGGAGCACGGCA 57.383 40.909 0.00 0.00 0.00 5.69
37 38 2.772077 TAGTTTATGGAGCACGGCAA 57.228 45.000 0.00 0.00 0.00 4.52
38 39 1.904287 AGTTTATGGAGCACGGCAAA 58.096 45.000 0.00 0.00 0.00 3.68
39 40 2.446435 AGTTTATGGAGCACGGCAAAT 58.554 42.857 0.00 0.00 0.00 2.32
40 41 2.164219 AGTTTATGGAGCACGGCAAATG 59.836 45.455 0.00 0.00 0.00 2.32
41 42 1.832883 TTATGGAGCACGGCAAATGT 58.167 45.000 0.00 0.00 0.00 2.71
42 43 2.700722 TATGGAGCACGGCAAATGTA 57.299 45.000 0.00 0.00 0.00 2.29
43 44 1.382522 ATGGAGCACGGCAAATGTAG 58.617 50.000 0.00 0.00 0.00 2.74
44 45 0.036164 TGGAGCACGGCAAATGTAGT 59.964 50.000 0.00 0.00 0.00 2.73
45 46 1.165270 GGAGCACGGCAAATGTAGTT 58.835 50.000 0.00 0.00 0.00 2.24
46 47 1.539827 GGAGCACGGCAAATGTAGTTT 59.460 47.619 0.00 0.00 0.00 2.66
47 48 2.745281 GGAGCACGGCAAATGTAGTTTA 59.255 45.455 0.00 0.00 0.00 2.01
48 49 3.377172 GGAGCACGGCAAATGTAGTTTAT 59.623 43.478 0.00 0.00 0.00 1.40
49 50 4.342772 GAGCACGGCAAATGTAGTTTATG 58.657 43.478 0.00 0.00 0.00 1.90
50 51 3.128589 AGCACGGCAAATGTAGTTTATGG 59.871 43.478 0.00 0.00 0.00 2.74
51 52 3.127895 GCACGGCAAATGTAGTTTATGGA 59.872 43.478 0.00 0.00 0.00 3.41
52 53 4.202010 GCACGGCAAATGTAGTTTATGGAT 60.202 41.667 0.00 0.00 0.00 3.41
53 54 5.510671 CACGGCAAATGTAGTTTATGGATC 58.489 41.667 0.00 0.00 0.00 3.36
54 55 4.272504 ACGGCAAATGTAGTTTATGGATCG 59.727 41.667 0.00 0.00 0.00 3.69
55 56 4.272504 CGGCAAATGTAGTTTATGGATCGT 59.727 41.667 0.00 0.00 0.00 3.73
56 57 5.510671 GGCAAATGTAGTTTATGGATCGTG 58.489 41.667 0.00 0.00 0.00 4.35
57 58 5.295787 GGCAAATGTAGTTTATGGATCGTGA 59.704 40.000 0.00 0.00 0.00 4.35
58 59 6.192360 GCAAATGTAGTTTATGGATCGTGAC 58.808 40.000 0.00 0.00 0.00 3.67
59 60 6.183360 GCAAATGTAGTTTATGGATCGTGACA 60.183 38.462 0.00 0.00 0.00 3.58
60 61 7.401860 CAAATGTAGTTTATGGATCGTGACAG 58.598 38.462 0.00 0.00 0.00 3.51
61 62 5.654603 TGTAGTTTATGGATCGTGACAGT 57.345 39.130 0.00 0.00 0.00 3.55
62 63 6.032956 TGTAGTTTATGGATCGTGACAGTT 57.967 37.500 0.00 0.00 0.00 3.16
63 64 6.460781 TGTAGTTTATGGATCGTGACAGTTT 58.539 36.000 0.00 0.00 0.00 2.66
64 65 6.932400 TGTAGTTTATGGATCGTGACAGTTTT 59.068 34.615 0.00 0.00 0.00 2.43
65 66 8.089597 TGTAGTTTATGGATCGTGACAGTTTTA 58.910 33.333 0.00 0.00 0.00 1.52
66 67 7.360575 AGTTTATGGATCGTGACAGTTTTAC 57.639 36.000 0.00 0.00 0.00 2.01
67 68 7.159372 AGTTTATGGATCGTGACAGTTTTACT 58.841 34.615 0.00 0.00 0.00 2.24
68 69 8.308931 AGTTTATGGATCGTGACAGTTTTACTA 58.691 33.333 0.00 0.00 0.00 1.82
69 70 9.095065 GTTTATGGATCGTGACAGTTTTACTAT 57.905 33.333 0.00 0.00 0.00 2.12
72 73 8.818141 ATGGATCGTGACAGTTTTACTATATG 57.182 34.615 0.00 0.00 0.00 1.78
73 74 7.207383 TGGATCGTGACAGTTTTACTATATGG 58.793 38.462 0.00 0.00 0.00 2.74
74 75 7.068962 TGGATCGTGACAGTTTTACTATATGGA 59.931 37.037 0.00 0.00 0.00 3.41
75 76 7.381678 GGATCGTGACAGTTTTACTATATGGAC 59.618 40.741 0.00 0.00 0.00 4.02
76 77 6.567050 TCGTGACAGTTTTACTATATGGACC 58.433 40.000 0.00 0.00 0.00 4.46
77 78 6.153170 TCGTGACAGTTTTACTATATGGACCA 59.847 38.462 0.00 0.00 0.00 4.02
78 79 6.984474 CGTGACAGTTTTACTATATGGACCAT 59.016 38.462 12.67 12.67 0.00 3.55
79 80 7.042725 CGTGACAGTTTTACTATATGGACCATG 60.043 40.741 17.73 2.89 0.00 3.66
80 81 7.226720 GTGACAGTTTTACTATATGGACCATGG 59.773 40.741 17.73 11.19 0.00 3.66
81 82 6.062095 ACAGTTTTACTATATGGACCATGGC 58.938 40.000 17.73 4.47 0.00 4.40
82 83 6.061441 CAGTTTTACTATATGGACCATGGCA 58.939 40.000 17.73 2.49 0.00 4.92
83 84 6.545666 CAGTTTTACTATATGGACCATGGCAA 59.454 38.462 17.73 0.00 0.00 4.52
84 85 7.068103 CAGTTTTACTATATGGACCATGGCAAA 59.932 37.037 17.73 7.53 0.00 3.68
85 86 7.784550 AGTTTTACTATATGGACCATGGCAAAT 59.215 33.333 17.73 5.23 0.00 2.32
86 87 8.421002 GTTTTACTATATGGACCATGGCAAATT 58.579 33.333 17.73 0.00 0.00 1.82
87 88 8.546083 TTTACTATATGGACCATGGCAAATTT 57.454 30.769 17.73 0.66 0.00 1.82
88 89 6.655078 ACTATATGGACCATGGCAAATTTC 57.345 37.500 17.73 0.00 0.00 2.17
89 90 6.376248 ACTATATGGACCATGGCAAATTTCT 58.624 36.000 17.73 0.00 0.00 2.52
90 91 6.840705 ACTATATGGACCATGGCAAATTTCTT 59.159 34.615 17.73 0.00 0.00 2.52
91 92 4.914177 ATGGACCATGGCAAATTTCTTT 57.086 36.364 13.04 0.00 0.00 2.52
92 93 4.005487 TGGACCATGGCAAATTTCTTTG 57.995 40.909 13.04 0.00 43.81 2.77
93 94 3.390639 TGGACCATGGCAAATTTCTTTGT 59.609 39.130 13.04 0.00 43.07 2.83
94 95 3.996363 GGACCATGGCAAATTTCTTTGTC 59.004 43.478 13.04 0.00 45.28 3.18
95 96 4.262592 GGACCATGGCAAATTTCTTTGTCT 60.263 41.667 13.04 0.00 45.29 3.41
96 97 5.294734 ACCATGGCAAATTTCTTTGTCTT 57.705 34.783 13.04 0.00 45.29 3.01
97 98 5.683681 ACCATGGCAAATTTCTTTGTCTTT 58.316 33.333 13.04 0.00 45.29 2.52
98 99 5.528320 ACCATGGCAAATTTCTTTGTCTTTG 59.472 36.000 13.04 2.94 45.29 2.77
99 100 5.445845 CATGGCAAATTTCTTTGTCTTTGC 58.554 37.500 9.68 9.68 45.29 3.68
106 107 7.349711 CAAATTTCTTTGTCTTTGCAAGATGG 58.650 34.615 0.00 0.00 40.18 3.51
107 108 3.648339 TCTTTGTCTTTGCAAGATGGC 57.352 42.857 0.00 0.00 40.18 4.40
108 109 2.957680 TCTTTGTCTTTGCAAGATGGCA 59.042 40.909 0.00 0.00 43.19 4.92
109 110 3.575256 TCTTTGTCTTTGCAAGATGGCAT 59.425 39.130 0.00 0.00 44.48 4.40
110 111 4.039488 TCTTTGTCTTTGCAAGATGGCATT 59.961 37.500 0.00 0.00 44.48 3.56
111 112 4.339872 TTGTCTTTGCAAGATGGCATTT 57.660 36.364 0.00 0.00 44.48 2.32
112 113 4.339872 TGTCTTTGCAAGATGGCATTTT 57.660 36.364 0.00 0.00 44.48 1.82
113 114 4.706035 TGTCTTTGCAAGATGGCATTTTT 58.294 34.783 0.00 0.00 44.48 1.94
141 142 9.675464 TCAACGGGACAATATTATAAATATCCC 57.325 33.333 11.13 11.13 0.00 3.85
258 264 5.048713 CCAGTCCACTTTACCACAAGAAATC 60.049 44.000 0.00 0.00 0.00 2.17
267 273 4.895668 ACCACAAGAAATCAATTGGCAT 57.104 36.364 5.42 0.00 0.00 4.40
272 278 3.431922 AGAAATCAATTGGCATCGCAG 57.568 42.857 5.42 0.00 0.00 5.18
298 304 5.930837 TTCTTCTTCTTTGGGAGCAAAAA 57.069 34.783 0.00 0.00 0.00 1.94
348 354 3.187227 GCGTGTCTCATCTTTTCACACAT 59.813 43.478 0.00 0.00 37.76 3.21
354 408 6.765512 TGTCTCATCTTTTCACACATACACAA 59.234 34.615 0.00 0.00 0.00 3.33
370 424 1.136695 CACAAACACACATGGCTGGTT 59.863 47.619 0.00 0.00 0.00 3.67
375 429 1.271054 ACACACATGGCTGGTTCTCTC 60.271 52.381 0.00 0.00 0.00 3.20
394 448 0.442699 CGGAAAGCAGACGTTTAGCC 59.557 55.000 0.00 0.00 0.00 3.93
408 462 5.045872 ACGTTTAGCCGATATTTCTACCAC 58.954 41.667 0.00 0.00 0.00 4.16
419 473 7.040340 CCGATATTTCTACCACTGATCACTACT 60.040 40.741 0.00 0.00 0.00 2.57
421 475 5.661056 TTTCTACCACTGATCACTACTGG 57.339 43.478 0.00 0.00 0.00 4.00
422 476 4.317530 TCTACCACTGATCACTACTGGT 57.682 45.455 12.16 12.16 38.75 4.00
463 528 3.389925 TTTCCACGAATCCACGTAGTT 57.610 42.857 0.00 0.00 41.61 2.24
464 529 2.642139 TCCACGAATCCACGTAGTTC 57.358 50.000 0.00 0.00 41.61 3.01
465 530 2.165167 TCCACGAATCCACGTAGTTCT 58.835 47.619 0.00 0.00 41.61 3.01
466 531 2.094906 TCCACGAATCCACGTAGTTCTG 60.095 50.000 0.00 0.00 41.61 3.02
468 533 3.314553 CACGAATCCACGTAGTTCTGTT 58.685 45.455 0.00 0.00 41.61 3.16
469 534 4.478699 CACGAATCCACGTAGTTCTGTTA 58.521 43.478 0.00 0.00 41.61 2.41
470 535 4.322804 CACGAATCCACGTAGTTCTGTTAC 59.677 45.833 0.00 0.00 41.61 2.50
471 536 4.217118 ACGAATCCACGTAGTTCTGTTACT 59.783 41.667 0.00 0.00 41.61 2.24
472 537 5.412594 ACGAATCCACGTAGTTCTGTTACTA 59.587 40.000 0.00 0.00 41.61 1.82
473 538 6.072508 ACGAATCCACGTAGTTCTGTTACTAA 60.073 38.462 0.00 0.00 41.61 2.24
474 539 6.803320 CGAATCCACGTAGTTCTGTTACTAAA 59.197 38.462 0.00 0.00 41.61 1.85
475 540 7.326789 CGAATCCACGTAGTTCTGTTACTAAAA 59.673 37.037 0.00 0.00 41.61 1.52
476 541 8.891671 AATCCACGTAGTTCTGTTACTAAAAA 57.108 30.769 0.00 0.00 41.61 1.94
477 542 7.935338 TCCACGTAGTTCTGTTACTAAAAAG 57.065 36.000 0.00 0.00 41.61 2.27
534 599 1.601759 AAAGTGGCATGCACGAGCT 60.602 52.632 21.36 6.46 42.74 4.09
535 600 1.859427 AAAGTGGCATGCACGAGCTG 61.859 55.000 21.36 3.35 42.74 4.24
587 652 2.663196 GTTACCTGTCCGCTGGCT 59.337 61.111 0.00 0.00 37.23 4.75
636 716 2.092592 ACCCCCTCCACGCTATAAAAAG 60.093 50.000 0.00 0.00 0.00 2.27
637 717 2.572290 CCCCTCCACGCTATAAAAAGG 58.428 52.381 0.00 0.00 0.00 3.11
638 718 2.572290 CCCTCCACGCTATAAAAAGGG 58.428 52.381 0.00 0.00 36.32 3.95
640 720 3.371166 CCCTCCACGCTATAAAAAGGGAA 60.371 47.826 0.00 0.00 43.93 3.97
641 721 4.266714 CCTCCACGCTATAAAAAGGGAAA 58.733 43.478 0.00 0.00 33.83 3.13
642 722 4.703093 CCTCCACGCTATAAAAAGGGAAAA 59.297 41.667 0.00 0.00 33.83 2.29
643 723 5.359860 CCTCCACGCTATAAAAAGGGAAAAT 59.640 40.000 0.00 0.00 33.83 1.82
644 724 6.127451 CCTCCACGCTATAAAAAGGGAAAATT 60.127 38.462 0.00 0.00 33.83 1.82
645 725 7.234661 TCCACGCTATAAAAAGGGAAAATTT 57.765 32.000 0.00 0.00 33.83 1.82
646 726 7.672240 TCCACGCTATAAAAAGGGAAAATTTT 58.328 30.769 2.28 2.28 33.83 1.82
647 727 8.804204 TCCACGCTATAAAAAGGGAAAATTTTA 58.196 29.630 2.75 0.00 35.96 1.52
648 728 9.594478 CCACGCTATAAAAAGGGAAAATTTTAT 57.406 29.630 2.75 8.15 41.83 1.40
658 738 5.621197 GGGAAAATTTTATTTTTGCCGCT 57.379 34.783 2.75 0.00 43.94 5.52
659 739 5.627172 GGGAAAATTTTATTTTTGCCGCTC 58.373 37.500 2.75 0.00 43.94 5.03
660 740 5.411361 GGGAAAATTTTATTTTTGCCGCTCT 59.589 36.000 2.75 0.00 43.94 4.09
661 741 6.592220 GGGAAAATTTTATTTTTGCCGCTCTA 59.408 34.615 2.75 0.00 43.94 2.43
662 742 7.118535 GGGAAAATTTTATTTTTGCCGCTCTAA 59.881 33.333 2.75 0.00 43.94 2.10
663 743 8.168626 GGAAAATTTTATTTTTGCCGCTCTAAG 58.831 33.333 2.75 0.00 32.62 2.18
664 744 8.601845 AAAATTTTATTTTTGCCGCTCTAAGT 57.398 26.923 0.37 0.00 0.00 2.24
665 745 8.601845 AAATTTTATTTTTGCCGCTCTAAGTT 57.398 26.923 0.00 0.00 0.00 2.66
666 746 8.601845 AATTTTATTTTTGCCGCTCTAAGTTT 57.398 26.923 0.00 0.00 0.00 2.66
667 747 8.601845 ATTTTATTTTTGCCGCTCTAAGTTTT 57.398 26.923 0.00 0.00 0.00 2.43
668 748 7.401484 TTTATTTTTGCCGCTCTAAGTTTTG 57.599 32.000 0.00 0.00 0.00 2.44
669 749 2.415697 TTTGCCGCTCTAAGTTTTGC 57.584 45.000 0.00 0.00 0.00 3.68
670 750 0.596082 TTGCCGCTCTAAGTTTTGCC 59.404 50.000 0.00 0.00 0.00 4.52
671 751 0.536233 TGCCGCTCTAAGTTTTGCCA 60.536 50.000 0.00 0.00 0.00 4.92
672 752 0.596082 GCCGCTCTAAGTTTTGCCAA 59.404 50.000 0.00 0.00 0.00 4.52
673 753 1.202348 GCCGCTCTAAGTTTTGCCAAT 59.798 47.619 0.00 0.00 0.00 3.16
674 754 2.352715 GCCGCTCTAAGTTTTGCCAATT 60.353 45.455 0.00 0.00 0.00 2.32
675 755 3.860754 GCCGCTCTAAGTTTTGCCAATTT 60.861 43.478 0.00 0.00 0.00 1.82
676 756 4.306600 CCGCTCTAAGTTTTGCCAATTTT 58.693 39.130 0.00 0.00 0.00 1.82
677 757 4.385748 CCGCTCTAAGTTTTGCCAATTTTC 59.614 41.667 0.00 0.00 0.00 2.29
678 758 4.385748 CGCTCTAAGTTTTGCCAATTTTCC 59.614 41.667 0.00 0.00 0.00 3.13
679 759 5.541845 GCTCTAAGTTTTGCCAATTTTCCT 58.458 37.500 0.00 0.00 0.00 3.36
680 760 5.991606 GCTCTAAGTTTTGCCAATTTTCCTT 59.008 36.000 0.00 0.00 0.00 3.36
681 761 7.151976 GCTCTAAGTTTTGCCAATTTTCCTTA 58.848 34.615 0.00 0.00 0.00 2.69
682 762 7.819415 GCTCTAAGTTTTGCCAATTTTCCTTAT 59.181 33.333 0.00 0.00 0.00 1.73
683 763 9.143631 CTCTAAGTTTTGCCAATTTTCCTTATG 57.856 33.333 0.00 0.00 0.00 1.90
684 764 6.558771 AAGTTTTGCCAATTTTCCTTATGC 57.441 33.333 0.00 0.00 0.00 3.14
685 765 5.003160 AGTTTTGCCAATTTTCCTTATGCC 58.997 37.500 0.00 0.00 0.00 4.40
686 766 4.630644 TTTGCCAATTTTCCTTATGCCA 57.369 36.364 0.00 0.00 0.00 4.92
687 767 3.608316 TGCCAATTTTCCTTATGCCAC 57.392 42.857 0.00 0.00 0.00 5.01
688 768 3.172339 TGCCAATTTTCCTTATGCCACT 58.828 40.909 0.00 0.00 0.00 4.00
689 769 3.195396 TGCCAATTTTCCTTATGCCACTC 59.805 43.478 0.00 0.00 0.00 3.51
690 770 3.448660 GCCAATTTTCCTTATGCCACTCT 59.551 43.478 0.00 0.00 0.00 3.24
691 771 4.644685 GCCAATTTTCCTTATGCCACTCTA 59.355 41.667 0.00 0.00 0.00 2.43
692 772 5.221126 GCCAATTTTCCTTATGCCACTCTAG 60.221 44.000 0.00 0.00 0.00 2.43
693 773 6.122277 CCAATTTTCCTTATGCCACTCTAGA 58.878 40.000 0.00 0.00 0.00 2.43
694 774 6.774656 CCAATTTTCCTTATGCCACTCTAGAT 59.225 38.462 0.00 0.00 0.00 1.98
695 775 7.286316 CCAATTTTCCTTATGCCACTCTAGATT 59.714 37.037 0.00 0.00 0.00 2.40
696 776 8.689972 CAATTTTCCTTATGCCACTCTAGATTT 58.310 33.333 0.00 0.00 0.00 2.17
697 777 8.829373 ATTTTCCTTATGCCACTCTAGATTTT 57.171 30.769 0.00 0.00 0.00 1.82
698 778 7.630242 TTTCCTTATGCCACTCTAGATTTTG 57.370 36.000 0.00 0.00 0.00 2.44
699 779 6.560003 TCCTTATGCCACTCTAGATTTTGA 57.440 37.500 0.00 0.00 0.00 2.69
700 780 6.349300 TCCTTATGCCACTCTAGATTTTGAC 58.651 40.000 0.00 0.00 0.00 3.18
701 781 6.070251 TCCTTATGCCACTCTAGATTTTGACA 60.070 38.462 0.00 0.00 0.00 3.58
702 782 6.769822 CCTTATGCCACTCTAGATTTTGACAT 59.230 38.462 0.00 0.00 0.00 3.06
703 783 7.284034 CCTTATGCCACTCTAGATTTTGACATT 59.716 37.037 0.00 0.00 0.00 2.71
704 784 8.579850 TTATGCCACTCTAGATTTTGACATTT 57.420 30.769 0.00 0.00 0.00 2.32
705 785 6.500684 TGCCACTCTAGATTTTGACATTTC 57.499 37.500 0.00 0.00 0.00 2.17
706 786 6.003326 TGCCACTCTAGATTTTGACATTTCA 58.997 36.000 0.00 0.00 0.00 2.69
707 787 6.149973 TGCCACTCTAGATTTTGACATTTCAG 59.850 38.462 0.00 0.00 31.71 3.02
708 788 6.150140 GCCACTCTAGATTTTGACATTTCAGT 59.850 38.462 0.00 0.00 31.71 3.41
709 789 7.308830 GCCACTCTAGATTTTGACATTTCAGTT 60.309 37.037 0.00 0.00 31.71 3.16
710 790 8.571336 CCACTCTAGATTTTGACATTTCAGTTT 58.429 33.333 0.00 0.00 31.71 2.66
711 791 9.956720 CACTCTAGATTTTGACATTTCAGTTTT 57.043 29.630 0.00 0.00 31.71 2.43
712 792 9.956720 ACTCTAGATTTTGACATTTCAGTTTTG 57.043 29.630 0.00 0.00 31.71 2.44
713 793 8.801715 TCTAGATTTTGACATTTCAGTTTTGC 57.198 30.769 0.00 0.00 31.71 3.68
714 794 6.849588 AGATTTTGACATTTCAGTTTTGCC 57.150 33.333 0.00 0.00 31.71 4.52
715 795 6.347696 AGATTTTGACATTTCAGTTTTGCCA 58.652 32.000 0.00 0.00 31.71 4.92
716 796 5.793026 TTTTGACATTTCAGTTTTGCCAC 57.207 34.783 0.00 0.00 31.71 5.01
717 797 4.734398 TTGACATTTCAGTTTTGCCACT 57.266 36.364 0.00 0.00 31.71 4.00
718 798 4.305989 TGACATTTCAGTTTTGCCACTC 57.694 40.909 0.00 0.00 0.00 3.51
719 799 3.953612 TGACATTTCAGTTTTGCCACTCT 59.046 39.130 0.00 0.00 0.00 3.24
720 800 4.202040 TGACATTTCAGTTTTGCCACTCTG 60.202 41.667 0.00 0.00 0.00 3.35
721 801 3.953612 ACATTTCAGTTTTGCCACTCTGA 59.046 39.130 0.00 0.00 35.54 3.27
722 802 4.037208 ACATTTCAGTTTTGCCACTCTGAG 59.963 41.667 2.45 2.45 38.03 3.35
723 803 1.597742 TCAGTTTTGCCACTCTGAGC 58.402 50.000 4.19 0.00 33.77 4.26
724 804 0.595095 CAGTTTTGCCACTCTGAGCC 59.405 55.000 4.19 0.00 0.00 4.70
725 805 0.475906 AGTTTTGCCACTCTGAGCCT 59.524 50.000 4.19 0.00 0.00 4.58
726 806 1.133668 AGTTTTGCCACTCTGAGCCTT 60.134 47.619 4.19 0.00 0.00 4.35
727 807 1.683385 GTTTTGCCACTCTGAGCCTTT 59.317 47.619 4.19 0.00 0.00 3.11
728 808 1.321474 TTTGCCACTCTGAGCCTTTG 58.679 50.000 4.19 0.00 0.00 2.77
729 809 0.473755 TTGCCACTCTGAGCCTTTGA 59.526 50.000 4.19 0.00 0.00 2.69
730 810 0.250467 TGCCACTCTGAGCCTTTGAC 60.250 55.000 4.19 0.00 0.00 3.18
731 811 0.250467 GCCACTCTGAGCCTTTGACA 60.250 55.000 4.19 0.00 0.00 3.58
732 812 1.815408 GCCACTCTGAGCCTTTGACAA 60.815 52.381 4.19 0.00 0.00 3.18
733 813 2.575532 CCACTCTGAGCCTTTGACAAA 58.424 47.619 4.19 0.00 0.00 2.83
734 814 3.152341 CCACTCTGAGCCTTTGACAAAT 58.848 45.455 4.19 0.00 0.00 2.32
735 815 4.326826 CCACTCTGAGCCTTTGACAAATA 58.673 43.478 4.19 0.00 0.00 1.40
736 816 4.946157 CCACTCTGAGCCTTTGACAAATAT 59.054 41.667 4.19 0.00 0.00 1.28
737 817 5.065731 CCACTCTGAGCCTTTGACAAATATC 59.934 44.000 4.19 1.26 0.00 1.63
738 818 5.645067 CACTCTGAGCCTTTGACAAATATCA 59.355 40.000 4.19 5.57 0.00 2.15
739 819 5.645497 ACTCTGAGCCTTTGACAAATATCAC 59.355 40.000 4.19 0.00 0.00 3.06
740 820 5.559770 TCTGAGCCTTTGACAAATATCACA 58.440 37.500 0.05 0.00 0.00 3.58
741 821 6.003326 TCTGAGCCTTTGACAAATATCACAA 58.997 36.000 0.05 0.00 0.00 3.33
742 822 6.660521 TCTGAGCCTTTGACAAATATCACAAT 59.339 34.615 0.05 0.00 0.00 2.71
743 823 7.177216 TCTGAGCCTTTGACAAATATCACAATT 59.823 33.333 0.05 0.00 0.00 2.32
744 824 7.092079 TGAGCCTTTGACAAATATCACAATTG 58.908 34.615 3.24 3.24 0.00 2.32
745 825 6.996509 AGCCTTTGACAAATATCACAATTGT 58.003 32.000 4.92 4.92 39.82 2.71
755 835 9.806203 ACAAATATCACAATTGTCATTATGTGG 57.194 29.630 8.48 0.00 42.56 4.17
756 836 8.757789 CAAATATCACAATTGTCATTATGTGGC 58.242 33.333 8.48 0.00 42.56 5.01
757 837 5.918426 ATCACAATTGTCATTATGTGGCA 57.082 34.783 8.48 0.00 42.56 4.92
779 859 8.028540 GGCAAAACCAAAATAAATTAGAGTGG 57.971 34.615 0.00 0.00 38.86 4.00
780 860 7.360861 GGCAAAACCAAAATAAATTAGAGTGGC 60.361 37.037 0.00 0.00 38.86 5.01
781 861 7.172361 GCAAAACCAAAATAAATTAGAGTGGCA 59.828 33.333 0.00 0.00 0.00 4.92
782 862 9.050601 CAAAACCAAAATAAATTAGAGTGGCAA 57.949 29.630 0.00 0.00 0.00 4.52
783 863 9.791801 AAAACCAAAATAAATTAGAGTGGCAAT 57.208 25.926 0.00 0.00 0.00 3.56
784 864 9.791801 AAACCAAAATAAATTAGAGTGGCAATT 57.208 25.926 0.00 0.00 0.00 2.32
785 865 8.776376 ACCAAAATAAATTAGAGTGGCAATTG 57.224 30.769 0.00 0.00 0.00 2.32
786 866 8.374743 ACCAAAATAAATTAGAGTGGCAATTGT 58.625 29.630 7.40 0.00 0.00 2.71
787 867 8.658609 CCAAAATAAATTAGAGTGGCAATTGTG 58.341 33.333 7.40 0.00 0.00 3.33
788 868 9.421806 CAAAATAAATTAGAGTGGCAATTGTGA 57.578 29.630 7.40 0.00 0.00 3.58
792 872 7.701539 AAATTAGAGTGGCAATTGTGATACA 57.298 32.000 7.40 0.00 0.00 2.29
793 873 7.886629 AATTAGAGTGGCAATTGTGATACAT 57.113 32.000 7.40 0.00 0.00 2.29
794 874 7.886629 ATTAGAGTGGCAATTGTGATACATT 57.113 32.000 7.40 0.00 0.00 2.71
795 875 5.571784 AGAGTGGCAATTGTGATACATTG 57.428 39.130 7.40 0.00 0.00 2.82
796 876 5.012239 AGAGTGGCAATTGTGATACATTGT 58.988 37.500 7.40 0.00 0.00 2.71
797 877 5.124457 AGAGTGGCAATTGTGATACATTGTC 59.876 40.000 7.40 0.00 0.00 3.18
798 878 4.766373 AGTGGCAATTGTGATACATTGTCA 59.234 37.500 7.40 0.00 32.81 3.58
799 879 5.243507 AGTGGCAATTGTGATACATTGTCAA 59.756 36.000 7.40 0.00 35.08 3.18
800 880 5.925397 GTGGCAATTGTGATACATTGTCAAA 59.075 36.000 7.40 0.00 35.08 2.69
801 881 6.423302 GTGGCAATTGTGATACATTGTCAAAA 59.577 34.615 7.40 0.00 35.08 2.44
802 882 6.645827 TGGCAATTGTGATACATTGTCAAAAG 59.354 34.615 7.40 0.00 32.55 2.27
803 883 6.401367 GGCAATTGTGATACATTGTCAAAAGC 60.401 38.462 7.40 0.88 0.00 3.51
804 884 6.366877 GCAATTGTGATACATTGTCAAAAGCT 59.633 34.615 7.40 0.00 0.00 3.74
805 885 7.541783 GCAATTGTGATACATTGTCAAAAGCTA 59.458 33.333 7.40 0.00 0.00 3.32
806 886 9.069078 CAATTGTGATACATTGTCAAAAGCTAG 57.931 33.333 0.00 0.00 0.00 3.42
807 887 7.977789 TTGTGATACATTGTCAAAAGCTAGA 57.022 32.000 0.00 0.00 0.00 2.43
808 888 7.601073 TGTGATACATTGTCAAAAGCTAGAG 57.399 36.000 0.00 0.00 0.00 2.43
809 889 7.161404 TGTGATACATTGTCAAAAGCTAGAGT 58.839 34.615 0.00 0.00 0.00 3.24
810 890 7.118245 TGTGATACATTGTCAAAAGCTAGAGTG 59.882 37.037 0.00 0.00 0.00 3.51
811 891 6.595326 TGATACATTGTCAAAAGCTAGAGTGG 59.405 38.462 0.00 0.00 0.00 4.00
812 892 3.503748 ACATTGTCAAAAGCTAGAGTGGC 59.496 43.478 0.00 0.00 0.00 5.01
813 893 2.928801 TGTCAAAAGCTAGAGTGGCA 57.071 45.000 0.00 0.00 0.00 4.92
814 894 3.207265 TGTCAAAAGCTAGAGTGGCAA 57.793 42.857 0.00 0.00 0.00 4.52
815 895 3.550820 TGTCAAAAGCTAGAGTGGCAAA 58.449 40.909 0.00 0.00 0.00 3.68
816 896 3.951037 TGTCAAAAGCTAGAGTGGCAAAA 59.049 39.130 0.00 0.00 0.00 2.44
817 897 4.036734 TGTCAAAAGCTAGAGTGGCAAAAG 59.963 41.667 0.00 0.00 0.00 2.27
818 898 4.036852 GTCAAAAGCTAGAGTGGCAAAAGT 59.963 41.667 0.00 0.00 0.00 2.66
819 899 4.036734 TCAAAAGCTAGAGTGGCAAAAGTG 59.963 41.667 0.00 0.00 0.00 3.16
820 900 3.492102 AAGCTAGAGTGGCAAAAGTGA 57.508 42.857 0.00 0.00 0.00 3.41
821 901 3.492102 AGCTAGAGTGGCAAAAGTGAA 57.508 42.857 0.00 0.00 0.00 3.18
822 902 3.820557 AGCTAGAGTGGCAAAAGTGAAA 58.179 40.909 0.00 0.00 0.00 2.69
823 903 3.565902 AGCTAGAGTGGCAAAAGTGAAAC 59.434 43.478 0.00 0.00 0.00 2.78
824 904 3.315191 GCTAGAGTGGCAAAAGTGAAACA 59.685 43.478 0.00 0.00 41.43 2.83
825 905 4.202010 GCTAGAGTGGCAAAAGTGAAACAA 60.202 41.667 0.00 0.00 41.43 2.83
826 906 4.799564 AGAGTGGCAAAAGTGAAACAAA 57.200 36.364 0.00 0.00 41.43 2.83
827 907 5.146010 AGAGTGGCAAAAGTGAAACAAAA 57.854 34.783 0.00 0.00 41.43 2.44
828 908 5.733676 AGAGTGGCAAAAGTGAAACAAAAT 58.266 33.333 0.00 0.00 41.43 1.82
829 909 6.172630 AGAGTGGCAAAAGTGAAACAAAATT 58.827 32.000 0.00 0.00 41.43 1.82
830 910 7.327214 AGAGTGGCAAAAGTGAAACAAAATTA 58.673 30.769 0.00 0.00 41.43 1.40
831 911 7.821846 AGAGTGGCAAAAGTGAAACAAAATTAA 59.178 29.630 0.00 0.00 41.43 1.40
832 912 8.504812 AGTGGCAAAAGTGAAACAAAATTAAT 57.495 26.923 0.00 0.00 41.43 1.40
833 913 8.955388 AGTGGCAAAAGTGAAACAAAATTAATT 58.045 25.926 0.00 0.00 41.43 1.40
834 914 9.566530 GTGGCAAAAGTGAAACAAAATTAATTT 57.433 25.926 7.64 7.64 41.43 1.82
875 955 8.422973 TGGCAATTATGATATTTGTCAAAAGC 57.577 30.769 10.80 0.00 32.66 3.51
876 956 8.259411 TGGCAATTATGATATTTGTCAAAAGCT 58.741 29.630 10.80 0.00 32.66 3.74
877 957 9.748708 GGCAATTATGATATTTGTCAAAAGCTA 57.251 29.630 1.31 0.00 0.00 3.32
884 964 8.044060 TGATATTTGTCAAAAGCTAAGAGTGG 57.956 34.615 1.31 0.00 0.00 4.00
885 965 4.568152 TTTGTCAAAAGCTAAGAGTGGC 57.432 40.909 0.00 0.00 0.00 5.01
886 966 3.207265 TGTCAAAAGCTAAGAGTGGCA 57.793 42.857 0.00 0.00 32.62 4.92
887 967 3.550820 TGTCAAAAGCTAAGAGTGGCAA 58.449 40.909 0.00 0.00 32.62 4.52
888 968 3.951037 TGTCAAAAGCTAAGAGTGGCAAA 59.049 39.130 0.00 0.00 32.62 3.68
889 969 4.400884 TGTCAAAAGCTAAGAGTGGCAAAA 59.599 37.500 0.00 0.00 32.62 2.44
890 970 4.740205 GTCAAAAGCTAAGAGTGGCAAAAC 59.260 41.667 0.00 0.00 32.62 2.43
891 971 4.644685 TCAAAAGCTAAGAGTGGCAAAACT 59.355 37.500 0.00 0.00 32.62 2.66
892 972 4.574599 AAAGCTAAGAGTGGCAAAACTG 57.425 40.909 0.00 0.00 32.62 3.16
893 973 3.492102 AGCTAAGAGTGGCAAAACTGA 57.508 42.857 0.00 0.00 32.62 3.41
894 974 3.820557 AGCTAAGAGTGGCAAAACTGAA 58.179 40.909 0.00 0.00 32.62 3.02
895 975 4.207165 AGCTAAGAGTGGCAAAACTGAAA 58.793 39.130 0.00 0.00 32.62 2.69
896 976 4.829492 AGCTAAGAGTGGCAAAACTGAAAT 59.171 37.500 0.00 0.00 32.62 2.17
897 977 4.919754 GCTAAGAGTGGCAAAACTGAAATG 59.080 41.667 0.00 0.00 0.00 2.32
898 978 5.507985 GCTAAGAGTGGCAAAACTGAAATGT 60.508 40.000 0.00 0.00 0.00 2.71
899 979 4.574599 AGAGTGGCAAAACTGAAATGTC 57.425 40.909 0.00 0.00 0.00 3.06
900 980 3.953612 AGAGTGGCAAAACTGAAATGTCA 59.046 39.130 0.00 0.00 0.00 3.58
901 981 4.402155 AGAGTGGCAAAACTGAAATGTCAA 59.598 37.500 0.00 0.00 31.88 3.18
902 982 5.083533 AGTGGCAAAACTGAAATGTCAAA 57.916 34.783 0.00 0.00 31.88 2.69
903 983 5.486526 AGTGGCAAAACTGAAATGTCAAAA 58.513 33.333 0.00 0.00 31.88 2.44
904 984 6.114767 AGTGGCAAAACTGAAATGTCAAAAT 58.885 32.000 0.00 0.00 31.88 1.82
905 985 6.598850 AGTGGCAAAACTGAAATGTCAAAATT 59.401 30.769 0.00 0.00 31.88 1.82
906 986 7.121020 AGTGGCAAAACTGAAATGTCAAAATTT 59.879 29.630 0.00 0.00 31.88 1.82
907 987 8.394121 GTGGCAAAACTGAAATGTCAAAATTTA 58.606 29.630 0.00 0.00 31.88 1.40
908 988 8.394121 TGGCAAAACTGAAATGTCAAAATTTAC 58.606 29.630 0.00 0.00 31.88 2.01
909 989 8.394121 GGCAAAACTGAAATGTCAAAATTTACA 58.606 29.630 0.00 0.00 31.88 2.41
910 990 9.424659 GCAAAACTGAAATGTCAAAATTTACAG 57.575 29.630 0.00 0.00 34.44 2.74
913 993 8.647143 AACTGAAATGTCAAAATTTACAGTGG 57.353 30.769 0.00 0.00 37.62 4.00
914 994 6.701400 ACTGAAATGTCAAAATTTACAGTGGC 59.299 34.615 0.00 0.00 37.00 5.01
915 995 6.577103 TGAAATGTCAAAATTTACAGTGGCA 58.423 32.000 0.00 0.00 29.89 4.92
916 996 7.215789 TGAAATGTCAAAATTTACAGTGGCAT 58.784 30.769 2.54 2.54 37.91 4.40
917 997 8.363390 TGAAATGTCAAAATTTACAGTGGCATA 58.637 29.630 7.84 0.00 35.34 3.14
918 998 9.202273 GAAATGTCAAAATTTACAGTGGCATAA 57.798 29.630 7.84 0.00 35.34 1.90
919 999 9.553064 AAATGTCAAAATTTACAGTGGCATAAA 57.447 25.926 7.84 0.00 35.34 1.40
920 1000 8.761575 ATGTCAAAATTTACAGTGGCATAAAG 57.238 30.769 6.00 0.00 34.66 1.85
921 1001 7.946207 TGTCAAAATTTACAGTGGCATAAAGA 58.054 30.769 0.00 0.00 0.00 2.52
922 1002 8.417106 TGTCAAAATTTACAGTGGCATAAAGAA 58.583 29.630 0.00 0.00 0.00 2.52
923 1003 9.255304 GTCAAAATTTACAGTGGCATAAAGAAA 57.745 29.630 0.00 0.00 0.00 2.52
924 1004 9.823647 TCAAAATTTACAGTGGCATAAAGAAAA 57.176 25.926 0.00 0.00 0.00 2.29
928 1008 8.776376 ATTTACAGTGGCATAAAGAAAATTGG 57.224 30.769 0.00 0.00 0.00 3.16
929 1009 4.568956 ACAGTGGCATAAAGAAAATTGGC 58.431 39.130 0.00 0.00 35.41 4.52
930 1010 4.040217 ACAGTGGCATAAAGAAAATTGGCA 59.960 37.500 0.00 0.00 41.64 4.92
931 1011 4.996122 CAGTGGCATAAAGAAAATTGGCAA 59.004 37.500 0.68 0.68 44.76 4.52
932 1012 5.469421 CAGTGGCATAAAGAAAATTGGCAAA 59.531 36.000 3.01 0.00 44.76 3.68
933 1013 6.017275 CAGTGGCATAAAGAAAATTGGCAAAA 60.017 34.615 3.01 0.00 44.76 2.44
934 1014 6.716173 AGTGGCATAAAGAAAATTGGCAAAAT 59.284 30.769 3.01 0.00 44.76 1.82
935 1015 7.022979 GTGGCATAAAGAAAATTGGCAAAATC 58.977 34.615 3.01 3.02 44.76 2.17
936 1016 6.941436 TGGCATAAAGAAAATTGGCAAAATCT 59.059 30.769 3.01 5.49 41.05 2.40
937 1017 8.099537 TGGCATAAAGAAAATTGGCAAAATCTA 58.900 29.630 3.01 0.00 41.05 1.98
938 1018 8.606602 GGCATAAAGAAAATTGGCAAAATCTAG 58.393 33.333 3.01 1.89 35.00 2.43
939 1019 9.369904 GCATAAAGAAAATTGGCAAAATCTAGA 57.630 29.630 3.01 0.00 0.00 2.43
942 1022 8.822652 AAAGAAAATTGGCAAAATCTAGAGTG 57.177 30.769 3.01 0.00 0.00 3.51
943 1023 6.928520 AGAAAATTGGCAAAATCTAGAGTGG 58.071 36.000 3.01 0.00 0.00 4.00
944 1024 4.725790 AATTGGCAAAATCTAGAGTGGC 57.274 40.909 3.01 16.21 37.09 5.01
945 1025 2.877097 TGGCAAAATCTAGAGTGGCA 57.123 45.000 19.84 19.84 43.41 4.92
946 1026 3.153369 TGGCAAAATCTAGAGTGGCAA 57.847 42.857 20.86 8.40 42.78 4.52
947 1027 3.495331 TGGCAAAATCTAGAGTGGCAAA 58.505 40.909 20.86 7.34 42.78 3.68
948 1028 3.894427 TGGCAAAATCTAGAGTGGCAAAA 59.106 39.130 20.86 5.26 42.78 2.44
949 1029 4.343526 TGGCAAAATCTAGAGTGGCAAAAA 59.656 37.500 20.86 4.99 42.78 1.94
950 1030 4.686091 GGCAAAATCTAGAGTGGCAAAAAC 59.314 41.667 17.47 0.63 36.61 2.43
951 1031 5.288804 GCAAAATCTAGAGTGGCAAAAACA 58.711 37.500 11.01 0.00 0.00 2.83
952 1032 5.752955 GCAAAATCTAGAGTGGCAAAAACAA 59.247 36.000 11.01 0.00 0.00 2.83
953 1033 6.257630 GCAAAATCTAGAGTGGCAAAAACAAA 59.742 34.615 11.01 0.00 0.00 2.83
954 1034 7.201600 GCAAAATCTAGAGTGGCAAAAACAAAA 60.202 33.333 11.01 0.00 0.00 2.44
955 1035 8.829612 CAAAATCTAGAGTGGCAAAAACAAAAT 58.170 29.630 0.00 0.00 0.00 1.82
956 1036 8.962884 AAATCTAGAGTGGCAAAAACAAAATT 57.037 26.923 0.00 0.00 0.00 1.82
957 1037 8.962884 AATCTAGAGTGGCAAAAACAAAATTT 57.037 26.923 0.00 0.00 0.00 1.82
958 1038 8.962884 ATCTAGAGTGGCAAAAACAAAATTTT 57.037 26.923 0.00 0.00 32.89 1.82
959 1039 8.419076 TCTAGAGTGGCAAAAACAAAATTTTC 57.581 30.769 0.00 0.00 30.31 2.29
960 1040 6.105657 AGAGTGGCAAAAACAAAATTTTCG 57.894 33.333 0.00 0.00 30.31 3.46
961 1041 4.657055 AGTGGCAAAAACAAAATTTTCGC 58.343 34.783 0.00 0.00 30.31 4.70
962 1042 3.788694 GTGGCAAAAACAAAATTTTCGCC 59.211 39.130 7.06 7.06 41.54 5.54
963 1043 3.691609 TGGCAAAAACAAAATTTTCGCCT 59.308 34.783 13.59 0.00 41.62 5.52
964 1044 4.876107 TGGCAAAAACAAAATTTTCGCCTA 59.124 33.333 13.59 0.65 41.62 3.93
965 1045 5.529060 TGGCAAAAACAAAATTTTCGCCTAT 59.471 32.000 13.59 0.00 41.62 2.57
966 1046 6.706270 TGGCAAAAACAAAATTTTCGCCTATA 59.294 30.769 13.59 0.00 41.62 1.31
967 1047 7.226720 TGGCAAAAACAAAATTTTCGCCTATAA 59.773 29.630 13.59 0.00 41.62 0.98
968 1048 8.070769 GGCAAAAACAAAATTTTCGCCTATAAA 58.929 29.630 6.80 0.00 40.00 1.40
969 1049 9.439537 GCAAAAACAAAATTTTCGCCTATAAAA 57.560 25.926 0.00 0.00 30.31 1.52
974 1054 9.495572 AACAAAATTTTCGCCTATAAAAATCCA 57.504 25.926 0.00 0.00 34.78 3.41
975 1055 8.931775 ACAAAATTTTCGCCTATAAAAATCCAC 58.068 29.630 0.00 0.00 34.78 4.02
976 1056 7.749539 AAATTTTCGCCTATAAAAATCCACG 57.250 32.000 0.00 0.00 34.78 4.94
977 1057 5.883503 TTTTCGCCTATAAAAATCCACGT 57.116 34.783 0.00 0.00 0.00 4.49
978 1058 5.473796 TTTCGCCTATAAAAATCCACGTC 57.526 39.130 0.00 0.00 0.00 4.34
979 1059 3.117794 TCGCCTATAAAAATCCACGTCG 58.882 45.455 0.00 0.00 0.00 5.12
1020 1107 3.168604 CACGCACGCTCAGAGTCG 61.169 66.667 11.32 11.32 0.00 4.18
1049 1136 4.204012 AGCTAGATACAGAGTCCACAGTC 58.796 47.826 0.00 0.00 0.00 3.51
1059 1183 0.108585 GTCCACAGTCCACACACCAT 59.891 55.000 0.00 0.00 0.00 3.55
1066 1190 2.111384 AGTCCACACACCATAGCTAGG 58.889 52.381 0.00 0.00 0.00 3.02
1067 1191 0.830648 TCCACACACCATAGCTAGGC 59.169 55.000 0.00 0.00 0.00 3.93
1076 1200 3.107601 ACCATAGCTAGGCACAGAGAAA 58.892 45.455 0.00 0.00 0.00 2.52
1092 1216 3.839642 AAACAACACCATGCGCGCC 62.840 57.895 30.77 11.42 0.00 6.53
1260 1390 1.517257 GCTATGTGCGCTCGTCTGT 60.517 57.895 9.73 0.00 0.00 3.41
1269 1399 1.666011 GCTCGTCTGTGTCCTTGGA 59.334 57.895 0.00 0.00 0.00 3.53
1586 1719 4.059304 TGCCCCCATCGTTGCCAT 62.059 61.111 0.00 0.00 0.00 4.40
1590 1723 2.755064 CCCATCGTTGCCATGCCA 60.755 61.111 0.00 0.00 0.00 4.92
1665 1798 3.766691 GGGAGGTGCGGCGAGTTA 61.767 66.667 12.98 0.00 0.00 2.24
1766 1908 2.235898 CCTGTTTTCCTCTCCCTCTCTG 59.764 54.545 0.00 0.00 0.00 3.35
1767 1909 1.625818 TGTTTTCCTCTCCCTCTCTGC 59.374 52.381 0.00 0.00 0.00 4.26
1768 1910 1.625818 GTTTTCCTCTCCCTCTCTGCA 59.374 52.381 0.00 0.00 0.00 4.41
1802 2318 4.215201 TCGCGTTGTACATTCAATTTGTG 58.785 39.130 5.77 0.00 0.00 3.33
1807 2323 6.143758 GCGTTGTACATTCAATTTGTGTTCAT 59.856 34.615 0.00 0.00 0.00 2.57
1808 2324 7.306515 GCGTTGTACATTCAATTTGTGTTCATT 60.307 33.333 0.00 0.00 0.00 2.57
1881 2397 0.179129 CGGCTTTATTGCTGGCTTGG 60.179 55.000 0.00 0.00 35.80 3.61
1955 2486 9.391006 TGTATTTCTCTACCTTTTGCGATATTT 57.609 29.630 0.00 0.00 0.00 1.40
2033 2577 6.751888 AGAAAACTTCAATTTCGTTTGGACTG 59.248 34.615 0.00 0.00 40.78 3.51
2051 2595 2.943033 ACTGTACGAATATTTGCAGGGC 59.057 45.455 12.39 0.00 0.00 5.19
2095 2639 2.362077 GTGTTTTGGGTGCTTCATCTGT 59.638 45.455 0.00 0.00 0.00 3.41
2254 2831 3.126858 TGATTGCCGTTCAAGTAAGATGC 59.873 43.478 0.00 0.00 38.22 3.91
2335 2912 4.813697 GGACTATGAAAGAATGAGACCTGC 59.186 45.833 0.00 0.00 0.00 4.85
2390 2967 6.855836 TGCAGCAGGATAGTTAATTTTTCTG 58.144 36.000 0.00 0.00 0.00 3.02
2391 2968 5.745769 GCAGCAGGATAGTTAATTTTTCTGC 59.254 40.000 12.05 12.05 44.46 4.26
2392 2969 6.268566 CAGCAGGATAGTTAATTTTTCTGCC 58.731 40.000 15.13 2.19 45.01 4.85
2393 2970 6.096001 CAGCAGGATAGTTAATTTTTCTGCCT 59.904 38.462 15.13 3.98 45.01 4.75
2394 2971 6.319911 AGCAGGATAGTTAATTTTTCTGCCTC 59.680 38.462 15.13 0.00 45.01 4.70
2459 3087 8.645110 TCCTATTTTATAACTCCCTTAGTTCCG 58.355 37.037 0.00 0.00 45.64 4.30
2596 3316 8.997621 ACATATGTTTGTCGAGTTATTACTGT 57.002 30.769 1.41 0.00 33.84 3.55
2597 3317 9.431887 ACATATGTTTGTCGAGTTATTACTGTT 57.568 29.630 1.41 0.00 33.84 3.16
2602 3322 5.600908 TGTCGAGTTATTACTGTTTTGCC 57.399 39.130 0.00 0.00 33.84 4.52
2603 3323 4.150980 TGTCGAGTTATTACTGTTTTGCCG 59.849 41.667 0.00 0.00 33.84 5.69
2604 3324 3.123959 TCGAGTTATTACTGTTTTGCCGC 59.876 43.478 0.00 0.00 33.84 6.53
2605 3325 3.120477 CGAGTTATTACTGTTTTGCCGCA 60.120 43.478 0.00 0.00 33.84 5.69
2640 3545 7.976175 GGGGAAGAAGACTTAAAGCATAAAATG 59.024 37.037 0.00 0.00 36.39 2.32
2688 3593 6.370994 AGACAAACTTGACATCAGCTATTCAG 59.629 38.462 0.00 0.00 0.00 3.02
2705 3610 7.552687 AGCTATTCAGGATAAAACATCAAACGA 59.447 33.333 0.00 0.00 0.00 3.85
2712 3617 5.124776 GGATAAAACATCAAACGATGACCCA 59.875 40.000 9.33 0.00 42.54 4.51
2716 3621 1.739466 CATCAAACGATGACCCACCAG 59.261 52.381 0.00 0.00 42.54 4.00
2717 3622 1.052617 TCAAACGATGACCCACCAGA 58.947 50.000 0.00 0.00 31.50 3.86
2718 3623 1.628340 TCAAACGATGACCCACCAGAT 59.372 47.619 0.00 0.00 31.50 2.90
2720 3625 1.275666 AACGATGACCCACCAGATCA 58.724 50.000 0.00 0.00 0.00 2.92
2721 3626 1.275666 ACGATGACCCACCAGATCAA 58.724 50.000 0.00 0.00 0.00 2.57
2722 3627 1.208052 ACGATGACCCACCAGATCAAG 59.792 52.381 0.00 0.00 0.00 3.02
2723 3628 1.482182 CGATGACCCACCAGATCAAGA 59.518 52.381 0.00 0.00 0.00 3.02
2724 3629 2.482664 CGATGACCCACCAGATCAAGAG 60.483 54.545 0.00 0.00 0.00 2.85
2725 3630 2.325661 TGACCCACCAGATCAAGAGA 57.674 50.000 0.00 0.00 0.00 3.10
2727 3632 2.183679 GACCCACCAGATCAAGAGACT 58.816 52.381 0.00 0.00 0.00 3.24
2728 3633 2.569404 GACCCACCAGATCAAGAGACTT 59.431 50.000 0.00 0.00 0.00 3.01
2729 3634 3.769844 GACCCACCAGATCAAGAGACTTA 59.230 47.826 0.00 0.00 0.00 2.24
2730 3635 4.168101 ACCCACCAGATCAAGAGACTTAA 58.832 43.478 0.00 0.00 0.00 1.85
2874 4501 6.262944 GCATATATGTGGAGGAACATGAACAA 59.737 38.462 14.14 0.00 40.93 2.83
2964 4599 2.921821 TGGGCACATCATACAGACATG 58.078 47.619 0.00 0.00 0.00 3.21
2965 4600 1.605710 GGGCACATCATACAGACATGC 59.394 52.381 0.00 0.00 38.90 4.06
2966 4601 2.291365 GGCACATCATACAGACATGCA 58.709 47.619 0.00 0.00 40.52 3.96
2967 4602 2.882761 GGCACATCATACAGACATGCAT 59.117 45.455 0.00 0.00 40.52 3.96
3038 4678 3.953612 TGGATGGCCTTTTATCATGTGTC 59.046 43.478 3.32 0.00 34.31 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.630054 TCCATAAACTATATTTGCCATGGTAC 57.370 34.615 14.67 0.00 34.58 3.34
4 5 7.393234 GCTCCATAAACTATATTTGCCATGGTA 59.607 37.037 14.67 5.86 34.58 3.25
5 6 6.209391 GCTCCATAAACTATATTTGCCATGGT 59.791 38.462 14.67 0.00 34.58 3.55
6 7 6.209192 TGCTCCATAAACTATATTTGCCATGG 59.791 38.462 7.63 7.63 34.32 3.66
7 8 7.086376 GTGCTCCATAAACTATATTTGCCATG 58.914 38.462 0.00 0.00 0.00 3.66
8 9 6.072508 CGTGCTCCATAAACTATATTTGCCAT 60.073 38.462 0.00 0.00 0.00 4.40
9 10 5.238432 CGTGCTCCATAAACTATATTTGCCA 59.762 40.000 0.00 0.00 0.00 4.92
10 11 5.334879 CCGTGCTCCATAAACTATATTTGCC 60.335 44.000 0.00 0.00 0.00 4.52
11 12 5.689819 CCGTGCTCCATAAACTATATTTGC 58.310 41.667 0.00 0.00 0.00 3.68
12 13 5.238432 TGCCGTGCTCCATAAACTATATTTG 59.762 40.000 0.00 0.00 0.00 2.32
13 14 5.373222 TGCCGTGCTCCATAAACTATATTT 58.627 37.500 0.00 0.00 0.00 1.40
14 15 4.968259 TGCCGTGCTCCATAAACTATATT 58.032 39.130 0.00 0.00 0.00 1.28
15 16 4.617253 TGCCGTGCTCCATAAACTATAT 57.383 40.909 0.00 0.00 0.00 0.86
16 17 4.409718 TTGCCGTGCTCCATAAACTATA 57.590 40.909 0.00 0.00 0.00 1.31
17 18 3.275617 TTGCCGTGCTCCATAAACTAT 57.724 42.857 0.00 0.00 0.00 2.12
18 19 2.772077 TTGCCGTGCTCCATAAACTA 57.228 45.000 0.00 0.00 0.00 2.24
19 20 1.904287 TTTGCCGTGCTCCATAAACT 58.096 45.000 0.00 0.00 0.00 2.66
20 21 2.094752 ACATTTGCCGTGCTCCATAAAC 60.095 45.455 0.00 0.00 0.00 2.01
21 22 2.166829 ACATTTGCCGTGCTCCATAAA 58.833 42.857 0.00 0.00 0.00 1.40
22 23 1.832883 ACATTTGCCGTGCTCCATAA 58.167 45.000 0.00 0.00 0.00 1.90
23 24 2.093181 ACTACATTTGCCGTGCTCCATA 60.093 45.455 0.00 0.00 0.00 2.74
24 25 1.340017 ACTACATTTGCCGTGCTCCAT 60.340 47.619 0.00 0.00 0.00 3.41
25 26 0.036164 ACTACATTTGCCGTGCTCCA 59.964 50.000 0.00 0.00 0.00 3.86
26 27 1.165270 AACTACATTTGCCGTGCTCC 58.835 50.000 0.00 0.00 0.00 4.70
27 28 2.989422 AAACTACATTTGCCGTGCTC 57.011 45.000 0.00 0.00 0.00 4.26
28 29 3.128589 CCATAAACTACATTTGCCGTGCT 59.871 43.478 0.00 0.00 0.00 4.40
29 30 3.127895 TCCATAAACTACATTTGCCGTGC 59.872 43.478 0.00 0.00 0.00 5.34
30 31 4.955925 TCCATAAACTACATTTGCCGTG 57.044 40.909 0.00 0.00 0.00 4.94
31 32 4.272504 CGATCCATAAACTACATTTGCCGT 59.727 41.667 0.00 0.00 0.00 5.68
32 33 4.272504 ACGATCCATAAACTACATTTGCCG 59.727 41.667 0.00 0.00 0.00 5.69
33 34 5.295787 TCACGATCCATAAACTACATTTGCC 59.704 40.000 0.00 0.00 0.00 4.52
34 35 6.183360 TGTCACGATCCATAAACTACATTTGC 60.183 38.462 0.00 0.00 0.00 3.68
35 36 7.064609 ACTGTCACGATCCATAAACTACATTTG 59.935 37.037 0.00 0.00 0.00 2.32
36 37 7.103641 ACTGTCACGATCCATAAACTACATTT 58.896 34.615 0.00 0.00 0.00 2.32
37 38 6.640518 ACTGTCACGATCCATAAACTACATT 58.359 36.000 0.00 0.00 0.00 2.71
38 39 6.222038 ACTGTCACGATCCATAAACTACAT 57.778 37.500 0.00 0.00 0.00 2.29
39 40 5.654603 ACTGTCACGATCCATAAACTACA 57.345 39.130 0.00 0.00 0.00 2.74
40 41 6.963049 AAACTGTCACGATCCATAAACTAC 57.037 37.500 0.00 0.00 0.00 2.73
41 42 8.308931 AGTAAAACTGTCACGATCCATAAACTA 58.691 33.333 0.00 0.00 0.00 2.24
42 43 7.159372 AGTAAAACTGTCACGATCCATAAACT 58.841 34.615 0.00 0.00 0.00 2.66
43 44 7.360575 AGTAAAACTGTCACGATCCATAAAC 57.639 36.000 0.00 0.00 0.00 2.01
46 47 9.908152 CATATAGTAAAACTGTCACGATCCATA 57.092 33.333 0.00 0.00 0.00 2.74
47 48 7.872993 CCATATAGTAAAACTGTCACGATCCAT 59.127 37.037 0.00 0.00 0.00 3.41
48 49 7.068962 TCCATATAGTAAAACTGTCACGATCCA 59.931 37.037 0.00 0.00 0.00 3.41
49 50 7.381678 GTCCATATAGTAAAACTGTCACGATCC 59.618 40.741 0.00 0.00 0.00 3.36
50 51 7.381678 GGTCCATATAGTAAAACTGTCACGATC 59.618 40.741 0.00 0.00 0.00 3.69
51 52 7.147794 TGGTCCATATAGTAAAACTGTCACGAT 60.148 37.037 0.00 0.00 0.00 3.73
52 53 6.153170 TGGTCCATATAGTAAAACTGTCACGA 59.847 38.462 0.00 0.00 0.00 4.35
53 54 6.334989 TGGTCCATATAGTAAAACTGTCACG 58.665 40.000 0.00 0.00 0.00 4.35
54 55 7.226720 CCATGGTCCATATAGTAAAACTGTCAC 59.773 40.741 3.38 0.00 0.00 3.67
55 56 7.279615 CCATGGTCCATATAGTAAAACTGTCA 58.720 38.462 3.38 0.00 0.00 3.58
56 57 6.204882 GCCATGGTCCATATAGTAAAACTGTC 59.795 42.308 14.67 0.00 0.00 3.51
57 58 6.062095 GCCATGGTCCATATAGTAAAACTGT 58.938 40.000 14.67 0.00 0.00 3.55
58 59 6.061441 TGCCATGGTCCATATAGTAAAACTG 58.939 40.000 14.67 0.00 0.00 3.16
59 60 6.260700 TGCCATGGTCCATATAGTAAAACT 57.739 37.500 14.67 0.00 0.00 2.66
60 61 6.952773 TTGCCATGGTCCATATAGTAAAAC 57.047 37.500 14.67 0.00 0.00 2.43
61 62 8.546083 AATTTGCCATGGTCCATATAGTAAAA 57.454 30.769 14.67 1.11 0.00 1.52
62 63 8.546083 AAATTTGCCATGGTCCATATAGTAAA 57.454 30.769 14.67 8.86 0.00 2.01
63 64 8.004215 AGAAATTTGCCATGGTCCATATAGTAA 58.996 33.333 14.67 0.00 0.00 2.24
64 65 7.526041 AGAAATTTGCCATGGTCCATATAGTA 58.474 34.615 14.67 0.00 0.00 1.82
65 66 6.376248 AGAAATTTGCCATGGTCCATATAGT 58.624 36.000 14.67 0.00 0.00 2.12
66 67 6.906157 AGAAATTTGCCATGGTCCATATAG 57.094 37.500 14.67 0.00 0.00 1.31
67 68 7.125507 ACAAAGAAATTTGCCATGGTCCATATA 59.874 33.333 14.67 0.00 35.42 0.86
68 69 6.070078 ACAAAGAAATTTGCCATGGTCCATAT 60.070 34.615 14.67 1.59 35.42 1.78
69 70 5.248020 ACAAAGAAATTTGCCATGGTCCATA 59.752 36.000 14.67 0.00 35.42 2.74
70 71 4.041938 ACAAAGAAATTTGCCATGGTCCAT 59.958 37.500 14.67 0.00 35.42 3.41
71 72 3.390639 ACAAAGAAATTTGCCATGGTCCA 59.609 39.130 14.67 0.00 35.42 4.02
72 73 3.996363 GACAAAGAAATTTGCCATGGTCC 59.004 43.478 14.67 0.00 35.42 4.46
73 74 4.886579 AGACAAAGAAATTTGCCATGGTC 58.113 39.130 14.67 6.41 35.42 4.02
74 75 4.961438 AGACAAAGAAATTTGCCATGGT 57.039 36.364 14.67 0.00 35.42 3.55
75 76 5.992729 CAAAGACAAAGAAATTTGCCATGG 58.007 37.500 7.63 7.63 35.42 3.66
115 116 9.675464 GGGATATTTATAATATTGTCCCGTTGA 57.325 33.333 0.00 0.00 35.19 3.18
116 117 9.681062 AGGGATATTTATAATATTGTCCCGTTG 57.319 33.333 14.42 0.00 46.78 4.10
117 118 9.681062 CAGGGATATTTATAATATTGTCCCGTT 57.319 33.333 14.42 2.77 46.78 4.44
118 119 9.053472 TCAGGGATATTTATAATATTGTCCCGT 57.947 33.333 14.42 6.05 46.78 5.28
236 242 5.690865 TGATTTCTTGTGGTAAAGTGGACT 58.309 37.500 0.00 0.00 0.00 3.85
237 243 6.385649 TTGATTTCTTGTGGTAAAGTGGAC 57.614 37.500 0.00 0.00 0.00 4.02
258 264 1.994779 GAAAACCTGCGATGCCAATTG 59.005 47.619 0.00 0.00 0.00 2.32
267 273 3.315191 CCAAAGAAGAAGAAAACCTGCGA 59.685 43.478 0.00 0.00 0.00 5.10
272 278 3.636764 TGCTCCCAAAGAAGAAGAAAACC 59.363 43.478 0.00 0.00 0.00 3.27
298 304 7.588497 ACTTCTTTTGACCTATGCTTTCTTT 57.412 32.000 0.00 0.00 0.00 2.52
300 306 8.691661 TTTACTTCTTTTGACCTATGCTTTCT 57.308 30.769 0.00 0.00 0.00 2.52
301 307 7.539022 GCTTTACTTCTTTTGACCTATGCTTTC 59.461 37.037 0.00 0.00 0.00 2.62
302 308 7.371159 GCTTTACTTCTTTTGACCTATGCTTT 58.629 34.615 0.00 0.00 0.00 3.51
303 309 6.348540 CGCTTTACTTCTTTTGACCTATGCTT 60.349 38.462 0.00 0.00 0.00 3.91
304 310 5.122396 CGCTTTACTTCTTTTGACCTATGCT 59.878 40.000 0.00 0.00 0.00 3.79
305 311 5.106673 ACGCTTTACTTCTTTTGACCTATGC 60.107 40.000 0.00 0.00 0.00 3.14
306 312 6.073222 ACACGCTTTACTTCTTTTGACCTATG 60.073 38.462 0.00 0.00 0.00 2.23
307 313 5.995897 ACACGCTTTACTTCTTTTGACCTAT 59.004 36.000 0.00 0.00 0.00 2.57
308 314 5.362263 ACACGCTTTACTTCTTTTGACCTA 58.638 37.500 0.00 0.00 0.00 3.08
348 354 1.952990 CCAGCCATGTGTGTTTGTGTA 59.047 47.619 0.00 0.00 0.00 2.90
354 408 1.143684 AGAGAACCAGCCATGTGTGTT 59.856 47.619 0.00 0.00 0.00 3.32
370 424 0.959553 AACGTCTGCTTTCCGAGAGA 59.040 50.000 0.00 0.00 0.00 3.10
375 429 0.442699 GGCTAAACGTCTGCTTTCCG 59.557 55.000 0.00 0.00 0.00 4.30
394 448 7.805542 CAGTAGTGATCAGTGGTAGAAATATCG 59.194 40.741 13.54 0.00 0.00 2.92
408 462 6.920758 GCACTAGAAATACCAGTAGTGATCAG 59.079 42.308 11.58 0.00 43.37 2.90
419 473 7.938140 ATTAAGCAAAGCACTAGAAATACCA 57.062 32.000 0.00 0.00 0.00 3.25
421 475 9.290483 GGAAATTAAGCAAAGCACTAGAAATAC 57.710 33.333 0.00 0.00 0.00 1.89
422 476 9.019656 TGGAAATTAAGCAAAGCACTAGAAATA 57.980 29.630 0.00 0.00 0.00 1.40
465 530 9.744468 GCTCCTTTTGATTTCTTTTTAGTAACA 57.256 29.630 0.00 0.00 0.00 2.41
466 531 9.193133 GGCTCCTTTTGATTTCTTTTTAGTAAC 57.807 33.333 0.00 0.00 0.00 2.50
468 533 8.357402 GTGGCTCCTTTTGATTTCTTTTTAGTA 58.643 33.333 0.00 0.00 0.00 1.82
469 534 7.210174 GTGGCTCCTTTTGATTTCTTTTTAGT 58.790 34.615 0.00 0.00 0.00 2.24
470 535 6.363357 CGTGGCTCCTTTTGATTTCTTTTTAG 59.637 38.462 0.00 0.00 0.00 1.85
471 536 6.212955 CGTGGCTCCTTTTGATTTCTTTTTA 58.787 36.000 0.00 0.00 0.00 1.52
472 537 5.049828 CGTGGCTCCTTTTGATTTCTTTTT 58.950 37.500 0.00 0.00 0.00 1.94
473 538 4.620982 CGTGGCTCCTTTTGATTTCTTTT 58.379 39.130 0.00 0.00 0.00 2.27
474 539 3.552890 GCGTGGCTCCTTTTGATTTCTTT 60.553 43.478 0.00 0.00 0.00 2.52
475 540 2.029918 GCGTGGCTCCTTTTGATTTCTT 60.030 45.455 0.00 0.00 0.00 2.52
476 541 1.541588 GCGTGGCTCCTTTTGATTTCT 59.458 47.619 0.00 0.00 0.00 2.52
477 542 1.729149 CGCGTGGCTCCTTTTGATTTC 60.729 52.381 0.00 0.00 0.00 2.17
481 546 2.110213 ACGCGTGGCTCCTTTTGA 59.890 55.556 12.93 0.00 0.00 2.69
503 568 1.039856 CCACTTTGGGGTGTTTCCTG 58.960 55.000 0.00 0.00 35.63 3.86
594 659 2.270874 ATCCGGTCATGGTGGAAGGC 62.271 60.000 0.00 0.00 34.97 4.35
636 716 5.411361 AGAGCGGCAAAAATAAAATTTTCCC 59.589 36.000 6.72 2.64 30.31 3.97
637 717 6.480524 AGAGCGGCAAAAATAAAATTTTCC 57.519 33.333 6.72 0.00 30.31 3.13
638 718 8.708742 ACTTAGAGCGGCAAAAATAAAATTTTC 58.291 29.630 6.72 0.00 30.31 2.29
640 720 8.601845 AACTTAGAGCGGCAAAAATAAAATTT 57.398 26.923 1.45 0.00 0.00 1.82
641 721 8.601845 AAACTTAGAGCGGCAAAAATAAAATT 57.398 26.923 1.45 0.00 0.00 1.82
642 722 8.495148 CAAAACTTAGAGCGGCAAAAATAAAAT 58.505 29.630 1.45 0.00 0.00 1.82
643 723 7.517575 GCAAAACTTAGAGCGGCAAAAATAAAA 60.518 33.333 1.45 0.00 0.00 1.52
644 724 6.074034 GCAAAACTTAGAGCGGCAAAAATAAA 60.074 34.615 1.45 0.00 0.00 1.40
645 725 5.404066 GCAAAACTTAGAGCGGCAAAAATAA 59.596 36.000 1.45 0.00 0.00 1.40
646 726 4.920927 GCAAAACTTAGAGCGGCAAAAATA 59.079 37.500 1.45 0.00 0.00 1.40
647 727 3.740832 GCAAAACTTAGAGCGGCAAAAAT 59.259 39.130 1.45 0.00 0.00 1.82
648 728 3.120041 GCAAAACTTAGAGCGGCAAAAA 58.880 40.909 1.45 0.00 0.00 1.94
649 729 2.544903 GGCAAAACTTAGAGCGGCAAAA 60.545 45.455 1.45 0.00 0.00 2.44
650 730 1.000717 GGCAAAACTTAGAGCGGCAAA 60.001 47.619 1.45 0.00 0.00 3.68
651 731 0.596082 GGCAAAACTTAGAGCGGCAA 59.404 50.000 1.45 0.00 0.00 4.52
652 732 0.536233 TGGCAAAACTTAGAGCGGCA 60.536 50.000 1.45 0.00 0.00 5.69
653 733 0.596082 TTGGCAAAACTTAGAGCGGC 59.404 50.000 0.00 0.00 0.00 6.53
654 734 3.575965 AATTGGCAAAACTTAGAGCGG 57.424 42.857 3.01 0.00 0.00 5.52
655 735 4.385748 GGAAAATTGGCAAAACTTAGAGCG 59.614 41.667 3.01 0.00 0.00 5.03
656 736 5.541845 AGGAAAATTGGCAAAACTTAGAGC 58.458 37.500 3.01 0.00 0.00 4.09
657 737 9.143631 CATAAGGAAAATTGGCAAAACTTAGAG 57.856 33.333 3.01 3.24 0.00 2.43
658 738 7.602265 GCATAAGGAAAATTGGCAAAACTTAGA 59.398 33.333 3.01 0.00 0.00 2.10
659 739 7.148423 GGCATAAGGAAAATTGGCAAAACTTAG 60.148 37.037 3.01 5.01 35.00 2.18
660 740 6.652900 GGCATAAGGAAAATTGGCAAAACTTA 59.347 34.615 3.01 9.08 35.00 2.24
661 741 5.473162 GGCATAAGGAAAATTGGCAAAACTT 59.527 36.000 3.01 7.18 35.00 2.66
662 742 5.003160 GGCATAAGGAAAATTGGCAAAACT 58.997 37.500 3.01 0.00 35.00 2.66
663 743 4.759183 TGGCATAAGGAAAATTGGCAAAAC 59.241 37.500 3.01 0.00 41.05 2.43
664 744 4.759183 GTGGCATAAGGAAAATTGGCAAAA 59.241 37.500 3.01 0.00 44.76 2.44
665 745 4.041444 AGTGGCATAAGGAAAATTGGCAAA 59.959 37.500 3.01 0.00 44.76 3.68
666 746 3.582208 AGTGGCATAAGGAAAATTGGCAA 59.418 39.130 0.68 0.68 44.76 4.52
667 747 3.172339 AGTGGCATAAGGAAAATTGGCA 58.828 40.909 0.00 0.00 41.64 4.92
668 748 3.448660 AGAGTGGCATAAGGAAAATTGGC 59.551 43.478 0.00 0.00 35.41 4.52
669 749 6.122277 TCTAGAGTGGCATAAGGAAAATTGG 58.878 40.000 0.00 0.00 0.00 3.16
670 750 7.814264 ATCTAGAGTGGCATAAGGAAAATTG 57.186 36.000 0.00 0.00 0.00 2.32
671 751 8.829373 AAATCTAGAGTGGCATAAGGAAAATT 57.171 30.769 0.00 0.00 0.00 1.82
672 752 8.689972 CAAAATCTAGAGTGGCATAAGGAAAAT 58.310 33.333 0.00 0.00 0.00 1.82
673 753 7.888021 TCAAAATCTAGAGTGGCATAAGGAAAA 59.112 33.333 0.00 0.00 0.00 2.29
674 754 7.336931 GTCAAAATCTAGAGTGGCATAAGGAAA 59.663 37.037 0.00 0.00 0.00 3.13
675 755 6.823689 GTCAAAATCTAGAGTGGCATAAGGAA 59.176 38.462 0.00 0.00 0.00 3.36
676 756 6.070251 TGTCAAAATCTAGAGTGGCATAAGGA 60.070 38.462 0.00 0.00 0.00 3.36
677 757 6.115446 TGTCAAAATCTAGAGTGGCATAAGG 58.885 40.000 0.00 0.00 0.00 2.69
678 758 7.798596 ATGTCAAAATCTAGAGTGGCATAAG 57.201 36.000 15.58 0.00 34.66 1.73
679 759 8.579850 AAATGTCAAAATCTAGAGTGGCATAA 57.420 30.769 16.82 0.00 35.34 1.90
680 760 7.828717 TGAAATGTCAAAATCTAGAGTGGCATA 59.171 33.333 16.82 4.28 35.34 3.14
681 761 6.660521 TGAAATGTCAAAATCTAGAGTGGCAT 59.339 34.615 12.72 12.72 37.91 4.40
682 762 6.003326 TGAAATGTCAAAATCTAGAGTGGCA 58.997 36.000 9.74 9.74 0.00 4.92
683 763 6.150140 ACTGAAATGTCAAAATCTAGAGTGGC 59.850 38.462 0.00 0.00 31.88 5.01
684 764 7.678947 ACTGAAATGTCAAAATCTAGAGTGG 57.321 36.000 0.00 0.00 31.88 4.00
685 765 9.956720 AAAACTGAAATGTCAAAATCTAGAGTG 57.043 29.630 0.00 0.00 31.88 3.51
686 766 9.956720 CAAAACTGAAATGTCAAAATCTAGAGT 57.043 29.630 0.00 0.00 31.88 3.24
687 767 8.909671 GCAAAACTGAAATGTCAAAATCTAGAG 58.090 33.333 0.00 0.00 31.88 2.43
688 768 7.867403 GGCAAAACTGAAATGTCAAAATCTAGA 59.133 33.333 0.00 0.00 31.88 2.43
689 769 7.652909 TGGCAAAACTGAAATGTCAAAATCTAG 59.347 33.333 0.00 0.00 31.88 2.43
690 770 7.437862 GTGGCAAAACTGAAATGTCAAAATCTA 59.562 33.333 0.00 0.00 31.88 1.98
691 771 6.258507 GTGGCAAAACTGAAATGTCAAAATCT 59.741 34.615 0.00 0.00 31.88 2.40
692 772 6.258507 AGTGGCAAAACTGAAATGTCAAAATC 59.741 34.615 0.00 0.00 31.88 2.17
693 773 6.114767 AGTGGCAAAACTGAAATGTCAAAAT 58.885 32.000 0.00 0.00 31.88 1.82
694 774 5.486526 AGTGGCAAAACTGAAATGTCAAAA 58.513 33.333 0.00 0.00 31.88 2.44
695 775 5.083533 AGTGGCAAAACTGAAATGTCAAA 57.916 34.783 0.00 0.00 31.88 2.69
696 776 4.402155 AGAGTGGCAAAACTGAAATGTCAA 59.598 37.500 0.00 0.00 31.88 3.18
697 777 3.953612 AGAGTGGCAAAACTGAAATGTCA 59.046 39.130 0.00 0.00 0.00 3.58
698 778 4.036734 TCAGAGTGGCAAAACTGAAATGTC 59.963 41.667 14.13 0.00 36.63 3.06
699 779 3.953612 TCAGAGTGGCAAAACTGAAATGT 59.046 39.130 14.13 0.00 36.63 2.71
700 780 4.543692 CTCAGAGTGGCAAAACTGAAATG 58.456 43.478 16.20 5.92 38.60 2.32
701 781 3.005155 GCTCAGAGTGGCAAAACTGAAAT 59.995 43.478 16.20 0.00 38.60 2.17
702 782 2.358898 GCTCAGAGTGGCAAAACTGAAA 59.641 45.455 16.20 1.58 38.60 2.69
703 783 1.949525 GCTCAGAGTGGCAAAACTGAA 59.050 47.619 16.20 5.50 38.60 3.02
704 784 1.597742 GCTCAGAGTGGCAAAACTGA 58.402 50.000 15.16 15.16 37.71 3.41
705 785 0.595095 GGCTCAGAGTGGCAAAACTG 59.405 55.000 0.00 9.52 0.00 3.16
706 786 0.475906 AGGCTCAGAGTGGCAAAACT 59.524 50.000 0.00 0.00 0.00 2.66
707 787 1.322442 AAGGCTCAGAGTGGCAAAAC 58.678 50.000 0.00 0.00 0.00 2.43
708 788 1.682854 CAAAGGCTCAGAGTGGCAAAA 59.317 47.619 0.00 0.00 0.00 2.44
709 789 1.133823 TCAAAGGCTCAGAGTGGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
710 790 0.473755 TCAAAGGCTCAGAGTGGCAA 59.526 50.000 0.00 0.00 0.00 4.52
711 791 0.250467 GTCAAAGGCTCAGAGTGGCA 60.250 55.000 0.00 0.00 0.00 4.92
712 792 0.250467 TGTCAAAGGCTCAGAGTGGC 60.250 55.000 0.00 0.00 0.00 5.01
713 793 2.260844 TTGTCAAAGGCTCAGAGTGG 57.739 50.000 0.00 0.00 0.00 4.00
714 794 5.645067 TGATATTTGTCAAAGGCTCAGAGTG 59.355 40.000 4.03 0.00 0.00 3.51
715 795 5.645497 GTGATATTTGTCAAAGGCTCAGAGT 59.355 40.000 4.03 0.00 0.00 3.24
716 796 5.645067 TGTGATATTTGTCAAAGGCTCAGAG 59.355 40.000 4.03 0.00 0.00 3.35
717 797 5.559770 TGTGATATTTGTCAAAGGCTCAGA 58.440 37.500 4.03 2.96 0.00 3.27
718 798 5.885230 TGTGATATTTGTCAAAGGCTCAG 57.115 39.130 4.03 0.00 0.00 3.35
719 799 6.839124 ATTGTGATATTTGTCAAAGGCTCA 57.161 33.333 4.03 4.09 0.00 4.26
720 800 7.092716 ACAATTGTGATATTTGTCAAAGGCTC 58.907 34.615 11.07 1.68 29.37 4.70
721 801 6.996509 ACAATTGTGATATTTGTCAAAGGCT 58.003 32.000 11.07 0.00 29.37 4.58
722 802 7.281991 GACAATTGTGATATTTGTCAAAGGC 57.718 36.000 17.58 0.00 43.81 4.35
729 809 9.806203 CCACATAATGACAATTGTGATATTTGT 57.194 29.630 17.58 13.83 41.50 2.83
730 810 8.757789 GCCACATAATGACAATTGTGATATTTG 58.242 33.333 17.58 13.23 41.50 2.32
731 811 8.476447 TGCCACATAATGACAATTGTGATATTT 58.524 29.630 17.58 1.50 41.50 1.40
732 812 8.009622 TGCCACATAATGACAATTGTGATATT 57.990 30.769 17.58 14.97 41.50 1.28
733 813 7.585579 TGCCACATAATGACAATTGTGATAT 57.414 32.000 17.58 8.49 41.50 1.63
734 814 7.401955 TTGCCACATAATGACAATTGTGATA 57.598 32.000 17.58 6.43 41.50 2.15
735 815 5.918426 TGCCACATAATGACAATTGTGAT 57.082 34.783 17.58 10.77 41.50 3.06
736 816 5.718724 TTGCCACATAATGACAATTGTGA 57.281 34.783 17.58 8.31 41.50 3.58
737 817 6.347563 GGTTTTGCCACATAATGACAATTGTG 60.348 38.462 17.58 2.64 39.92 3.33
738 818 5.700373 GGTTTTGCCACATAATGACAATTGT 59.300 36.000 11.78 11.78 37.17 2.71
739 819 5.699915 TGGTTTTGCCACATAATGACAATTG 59.300 36.000 3.24 3.24 43.61 2.32
740 820 5.862845 TGGTTTTGCCACATAATGACAATT 58.137 33.333 0.00 0.00 43.61 2.32
741 821 5.480642 TGGTTTTGCCACATAATGACAAT 57.519 34.783 0.00 0.00 43.61 2.71
742 822 4.944619 TGGTTTTGCCACATAATGACAA 57.055 36.364 0.00 0.00 43.61 3.18
754 834 7.360861 GCCACTCTAATTTATTTTGGTTTTGCC 60.361 37.037 0.00 0.00 37.90 4.52
755 835 7.172361 TGCCACTCTAATTTATTTTGGTTTTGC 59.828 33.333 0.00 0.00 0.00 3.68
756 836 8.600449 TGCCACTCTAATTTATTTTGGTTTTG 57.400 30.769 0.00 0.00 0.00 2.44
757 837 9.791801 ATTGCCACTCTAATTTATTTTGGTTTT 57.208 25.926 0.00 0.00 0.00 2.43
758 838 9.791801 AATTGCCACTCTAATTTATTTTGGTTT 57.208 25.926 0.00 0.00 0.00 3.27
759 839 9.218440 CAATTGCCACTCTAATTTATTTTGGTT 57.782 29.630 0.00 0.00 0.00 3.67
760 840 8.374743 ACAATTGCCACTCTAATTTATTTTGGT 58.625 29.630 5.05 0.00 0.00 3.67
761 841 8.658609 CACAATTGCCACTCTAATTTATTTTGG 58.341 33.333 5.05 0.00 0.00 3.28
762 842 9.421806 TCACAATTGCCACTCTAATTTATTTTG 57.578 29.630 5.05 0.00 0.00 2.44
766 846 9.407380 TGTATCACAATTGCCACTCTAATTTAT 57.593 29.630 5.05 0.00 0.00 1.40
767 847 8.800370 TGTATCACAATTGCCACTCTAATTTA 57.200 30.769 5.05 0.00 0.00 1.40
768 848 7.701539 TGTATCACAATTGCCACTCTAATTT 57.298 32.000 5.05 0.00 0.00 1.82
769 849 7.886629 ATGTATCACAATTGCCACTCTAATT 57.113 32.000 5.05 0.00 0.00 1.40
770 850 7.340232 ACAATGTATCACAATTGCCACTCTAAT 59.660 33.333 5.05 0.00 0.00 1.73
771 851 6.658816 ACAATGTATCACAATTGCCACTCTAA 59.341 34.615 5.05 0.00 0.00 2.10
772 852 6.179756 ACAATGTATCACAATTGCCACTCTA 58.820 36.000 5.05 0.00 0.00 2.43
773 853 5.012239 ACAATGTATCACAATTGCCACTCT 58.988 37.500 5.05 0.00 0.00 3.24
774 854 5.106197 TGACAATGTATCACAATTGCCACTC 60.106 40.000 5.05 0.00 0.00 3.51
775 855 4.766373 TGACAATGTATCACAATTGCCACT 59.234 37.500 5.05 0.00 0.00 4.00
776 856 5.058149 TGACAATGTATCACAATTGCCAC 57.942 39.130 5.05 0.00 0.00 5.01
777 857 5.718724 TTGACAATGTATCACAATTGCCA 57.281 34.783 5.05 0.00 0.00 4.92
778 858 6.401367 GCTTTTGACAATGTATCACAATTGCC 60.401 38.462 5.05 0.00 0.00 4.52
779 859 6.366877 AGCTTTTGACAATGTATCACAATTGC 59.633 34.615 5.05 0.00 0.00 3.56
780 860 7.878477 AGCTTTTGACAATGTATCACAATTG 57.122 32.000 3.24 3.24 0.00 2.32
781 861 9.013229 TCTAGCTTTTGACAATGTATCACAATT 57.987 29.630 0.00 0.00 0.00 2.32
782 862 8.565896 TCTAGCTTTTGACAATGTATCACAAT 57.434 30.769 0.00 0.00 0.00 2.71
783 863 7.661437 ACTCTAGCTTTTGACAATGTATCACAA 59.339 33.333 0.00 0.00 0.00 3.33
784 864 7.118245 CACTCTAGCTTTTGACAATGTATCACA 59.882 37.037 0.00 0.00 0.00 3.58
785 865 7.413438 CCACTCTAGCTTTTGACAATGTATCAC 60.413 40.741 0.00 0.00 0.00 3.06
786 866 6.595326 CCACTCTAGCTTTTGACAATGTATCA 59.405 38.462 0.00 0.00 0.00 2.15
787 867 6.457528 GCCACTCTAGCTTTTGACAATGTATC 60.458 42.308 0.00 0.00 0.00 2.24
788 868 5.355350 GCCACTCTAGCTTTTGACAATGTAT 59.645 40.000 0.00 0.00 0.00 2.29
789 869 4.695455 GCCACTCTAGCTTTTGACAATGTA 59.305 41.667 0.00 0.00 0.00 2.29
790 870 3.503748 GCCACTCTAGCTTTTGACAATGT 59.496 43.478 0.00 0.00 0.00 2.71
791 871 3.503363 TGCCACTCTAGCTTTTGACAATG 59.497 43.478 0.00 0.00 0.00 2.82
792 872 3.754965 TGCCACTCTAGCTTTTGACAAT 58.245 40.909 0.00 0.00 0.00 2.71
793 873 3.207265 TGCCACTCTAGCTTTTGACAA 57.793 42.857 0.00 0.00 0.00 3.18
794 874 2.928801 TGCCACTCTAGCTTTTGACA 57.071 45.000 0.00 0.00 0.00 3.58
795 875 4.036852 ACTTTTGCCACTCTAGCTTTTGAC 59.963 41.667 0.00 0.00 0.00 3.18
796 876 4.036734 CACTTTTGCCACTCTAGCTTTTGA 59.963 41.667 0.00 0.00 0.00 2.69
797 877 4.036734 TCACTTTTGCCACTCTAGCTTTTG 59.963 41.667 0.00 0.00 0.00 2.44
798 878 4.207165 TCACTTTTGCCACTCTAGCTTTT 58.793 39.130 0.00 0.00 0.00 2.27
799 879 3.820557 TCACTTTTGCCACTCTAGCTTT 58.179 40.909 0.00 0.00 0.00 3.51
800 880 3.492102 TCACTTTTGCCACTCTAGCTT 57.508 42.857 0.00 0.00 0.00 3.74
801 881 3.492102 TTCACTTTTGCCACTCTAGCT 57.508 42.857 0.00 0.00 0.00 3.32
802 882 3.315191 TGTTTCACTTTTGCCACTCTAGC 59.685 43.478 0.00 0.00 0.00 3.42
803 883 5.499139 TTGTTTCACTTTTGCCACTCTAG 57.501 39.130 0.00 0.00 0.00 2.43
804 884 5.906113 TTTGTTTCACTTTTGCCACTCTA 57.094 34.783 0.00 0.00 0.00 2.43
805 885 4.799564 TTTGTTTCACTTTTGCCACTCT 57.200 36.364 0.00 0.00 0.00 3.24
806 886 6.421377 AATTTTGTTTCACTTTTGCCACTC 57.579 33.333 0.00 0.00 0.00 3.51
807 887 7.913674 TTAATTTTGTTTCACTTTTGCCACT 57.086 28.000 0.00 0.00 0.00 4.00
808 888 9.566530 AAATTAATTTTGTTTCACTTTTGCCAC 57.433 25.926 7.64 0.00 0.00 5.01
809 889 9.565213 CAAATTAATTTTGTTTCACTTTTGCCA 57.435 25.926 10.77 0.00 39.93 4.92
849 929 9.048446 GCTTTTGACAAATATCATAATTGCCAT 57.952 29.630 0.50 0.00 0.00 4.40
850 930 8.259411 AGCTTTTGACAAATATCATAATTGCCA 58.741 29.630 0.50 0.00 0.00 4.92
851 931 8.652810 AGCTTTTGACAAATATCATAATTGCC 57.347 30.769 0.50 0.00 0.00 4.52
858 938 8.680903 CCACTCTTAGCTTTTGACAAATATCAT 58.319 33.333 0.50 0.00 0.00 2.45
859 939 7.362056 GCCACTCTTAGCTTTTGACAAATATCA 60.362 37.037 0.50 0.00 0.00 2.15
860 940 6.969473 GCCACTCTTAGCTTTTGACAAATATC 59.031 38.462 0.50 0.00 0.00 1.63
861 941 6.434028 TGCCACTCTTAGCTTTTGACAAATAT 59.566 34.615 0.50 0.00 0.00 1.28
862 942 5.767665 TGCCACTCTTAGCTTTTGACAAATA 59.232 36.000 0.50 0.00 0.00 1.40
863 943 4.584325 TGCCACTCTTAGCTTTTGACAAAT 59.416 37.500 0.50 0.00 0.00 2.32
864 944 3.951037 TGCCACTCTTAGCTTTTGACAAA 59.049 39.130 0.00 0.00 0.00 2.83
865 945 3.550820 TGCCACTCTTAGCTTTTGACAA 58.449 40.909 0.00 0.00 0.00 3.18
866 946 3.207265 TGCCACTCTTAGCTTTTGACA 57.793 42.857 0.00 0.00 0.00 3.58
867 947 4.568152 TTTGCCACTCTTAGCTTTTGAC 57.432 40.909 0.00 0.00 0.00 3.18
868 948 4.644685 AGTTTTGCCACTCTTAGCTTTTGA 59.355 37.500 0.00 0.00 0.00 2.69
869 949 4.741676 CAGTTTTGCCACTCTTAGCTTTTG 59.258 41.667 0.00 0.00 0.00 2.44
870 950 4.644685 TCAGTTTTGCCACTCTTAGCTTTT 59.355 37.500 0.00 0.00 0.00 2.27
871 951 4.207165 TCAGTTTTGCCACTCTTAGCTTT 58.793 39.130 0.00 0.00 0.00 3.51
872 952 3.820557 TCAGTTTTGCCACTCTTAGCTT 58.179 40.909 0.00 0.00 0.00 3.74
873 953 3.492102 TCAGTTTTGCCACTCTTAGCT 57.508 42.857 0.00 0.00 0.00 3.32
874 954 4.568152 TTTCAGTTTTGCCACTCTTAGC 57.432 40.909 0.00 0.00 0.00 3.09
875 955 6.076981 ACATTTCAGTTTTGCCACTCTTAG 57.923 37.500 0.00 0.00 0.00 2.18
876 956 5.592282 TGACATTTCAGTTTTGCCACTCTTA 59.408 36.000 0.00 0.00 0.00 2.10
877 957 4.402155 TGACATTTCAGTTTTGCCACTCTT 59.598 37.500 0.00 0.00 0.00 2.85
878 958 3.953612 TGACATTTCAGTTTTGCCACTCT 59.046 39.130 0.00 0.00 0.00 3.24
879 959 4.305989 TGACATTTCAGTTTTGCCACTC 57.694 40.909 0.00 0.00 0.00 3.51
880 960 4.734398 TTGACATTTCAGTTTTGCCACT 57.266 36.364 0.00 0.00 31.71 4.00
881 961 5.793026 TTTTGACATTTCAGTTTTGCCAC 57.207 34.783 0.00 0.00 31.71 5.01
882 962 6.998968 AATTTTGACATTTCAGTTTTGCCA 57.001 29.167 0.00 0.00 31.71 4.92
883 963 8.394121 TGTAAATTTTGACATTTCAGTTTTGCC 58.606 29.630 0.00 0.00 31.71 4.52
884 964 9.424659 CTGTAAATTTTGACATTTCAGTTTTGC 57.575 29.630 0.00 0.00 31.71 3.68
887 967 9.097257 CCACTGTAAATTTTGACATTTCAGTTT 57.903 29.630 0.00 0.00 35.09 2.66
888 968 7.224557 GCCACTGTAAATTTTGACATTTCAGTT 59.775 33.333 0.00 0.00 35.09 3.16
889 969 6.701400 GCCACTGTAAATTTTGACATTTCAGT 59.299 34.615 0.00 0.00 36.27 3.41
890 970 6.700960 TGCCACTGTAAATTTTGACATTTCAG 59.299 34.615 0.00 0.00 32.84 3.02
891 971 6.577103 TGCCACTGTAAATTTTGACATTTCA 58.423 32.000 0.00 0.00 0.00 2.69
892 972 7.656707 ATGCCACTGTAAATTTTGACATTTC 57.343 32.000 0.00 0.00 0.00 2.17
893 973 9.553064 TTTATGCCACTGTAAATTTTGACATTT 57.447 25.926 0.00 0.00 0.00 2.32
894 974 9.206870 CTTTATGCCACTGTAAATTTTGACATT 57.793 29.630 0.00 0.00 0.00 2.71
895 975 8.584157 TCTTTATGCCACTGTAAATTTTGACAT 58.416 29.630 0.00 0.00 0.00 3.06
896 976 7.946207 TCTTTATGCCACTGTAAATTTTGACA 58.054 30.769 0.00 0.00 0.00 3.58
897 977 8.810652 TTCTTTATGCCACTGTAAATTTTGAC 57.189 30.769 0.00 0.00 0.00 3.18
898 978 9.823647 TTTTCTTTATGCCACTGTAAATTTTGA 57.176 25.926 0.00 0.00 0.00 2.69
902 982 9.218440 CCAATTTTCTTTATGCCACTGTAAATT 57.782 29.630 0.00 0.00 0.00 1.82
903 983 7.334171 GCCAATTTTCTTTATGCCACTGTAAAT 59.666 33.333 0.00 0.00 0.00 1.40
904 984 6.648725 GCCAATTTTCTTTATGCCACTGTAAA 59.351 34.615 0.00 0.00 0.00 2.01
905 985 6.162777 GCCAATTTTCTTTATGCCACTGTAA 58.837 36.000 0.00 0.00 0.00 2.41
906 986 5.244851 TGCCAATTTTCTTTATGCCACTGTA 59.755 36.000 0.00 0.00 0.00 2.74
907 987 4.040217 TGCCAATTTTCTTTATGCCACTGT 59.960 37.500 0.00 0.00 0.00 3.55
908 988 4.567971 TGCCAATTTTCTTTATGCCACTG 58.432 39.130 0.00 0.00 0.00 3.66
909 989 4.888326 TGCCAATTTTCTTTATGCCACT 57.112 36.364 0.00 0.00 0.00 4.00
910 990 5.938438 TTTGCCAATTTTCTTTATGCCAC 57.062 34.783 0.00 0.00 0.00 5.01
911 991 6.941436 AGATTTTGCCAATTTTCTTTATGCCA 59.059 30.769 0.00 0.00 0.00 4.92
912 992 7.381766 AGATTTTGCCAATTTTCTTTATGCC 57.618 32.000 0.00 0.00 0.00 4.40
913 993 9.369904 TCTAGATTTTGCCAATTTTCTTTATGC 57.630 29.630 0.00 0.00 0.00 3.14
916 996 9.912634 CACTCTAGATTTTGCCAATTTTCTTTA 57.087 29.630 0.00 0.00 0.00 1.85
917 997 7.874528 CCACTCTAGATTTTGCCAATTTTCTTT 59.125 33.333 0.00 0.00 0.00 2.52
918 998 7.381323 CCACTCTAGATTTTGCCAATTTTCTT 58.619 34.615 0.00 0.00 0.00 2.52
919 999 6.573094 GCCACTCTAGATTTTGCCAATTTTCT 60.573 38.462 0.00 0.00 0.00 2.52
920 1000 5.578336 GCCACTCTAGATTTTGCCAATTTTC 59.422 40.000 0.00 0.00 0.00 2.29
921 1001 5.011943 TGCCACTCTAGATTTTGCCAATTTT 59.988 36.000 0.00 0.00 0.00 1.82
922 1002 4.527816 TGCCACTCTAGATTTTGCCAATTT 59.472 37.500 0.00 0.00 0.00 1.82
923 1003 4.088634 TGCCACTCTAGATTTTGCCAATT 58.911 39.130 0.00 0.00 0.00 2.32
924 1004 3.700538 TGCCACTCTAGATTTTGCCAAT 58.299 40.909 0.00 0.00 0.00 3.16
925 1005 3.153369 TGCCACTCTAGATTTTGCCAA 57.847 42.857 0.00 0.00 0.00 4.52
926 1006 2.877097 TGCCACTCTAGATTTTGCCA 57.123 45.000 0.00 0.00 0.00 4.92
927 1007 4.519540 TTTTGCCACTCTAGATTTTGCC 57.480 40.909 0.00 0.00 0.00 4.52
928 1008 5.288804 TGTTTTTGCCACTCTAGATTTTGC 58.711 37.500 0.00 0.00 0.00 3.68
929 1009 7.769272 TTTGTTTTTGCCACTCTAGATTTTG 57.231 32.000 0.00 0.00 0.00 2.44
930 1010 8.962884 ATTTTGTTTTTGCCACTCTAGATTTT 57.037 26.923 0.00 0.00 0.00 1.82
931 1011 8.962884 AATTTTGTTTTTGCCACTCTAGATTT 57.037 26.923 0.00 0.00 0.00 2.17
932 1012 8.962884 AAATTTTGTTTTTGCCACTCTAGATT 57.037 26.923 0.00 0.00 0.00 2.40
933 1013 8.962884 AAAATTTTGTTTTTGCCACTCTAGAT 57.037 26.923 1.75 0.00 0.00 1.98
934 1014 7.221838 CGAAAATTTTGTTTTTGCCACTCTAGA 59.778 33.333 8.47 0.00 0.00 2.43
935 1015 7.336975 CGAAAATTTTGTTTTTGCCACTCTAG 58.663 34.615 8.47 0.00 0.00 2.43
936 1016 6.237969 GCGAAAATTTTGTTTTTGCCACTCTA 60.238 34.615 8.47 0.00 40.92 2.43
937 1017 5.447144 GCGAAAATTTTGTTTTTGCCACTCT 60.447 36.000 8.47 0.00 40.92 3.24
938 1018 4.728131 GCGAAAATTTTGTTTTTGCCACTC 59.272 37.500 8.47 0.00 40.92 3.51
939 1019 4.657055 GCGAAAATTTTGTTTTTGCCACT 58.343 34.783 8.47 0.00 40.92 4.00
940 1020 4.989958 GCGAAAATTTTGTTTTTGCCAC 57.010 36.364 8.47 0.00 40.92 5.01
943 1023 8.995419 TTTATAGGCGAAAATTTTGTTTTTGC 57.005 26.923 8.47 14.19 44.18 3.68
948 1028 9.495572 TGGATTTTTATAGGCGAAAATTTTGTT 57.504 25.926 8.47 0.00 36.04 2.83
949 1029 8.931775 GTGGATTTTTATAGGCGAAAATTTTGT 58.068 29.630 8.47 0.00 36.04 2.83
950 1030 8.107564 CGTGGATTTTTATAGGCGAAAATTTTG 58.892 33.333 8.47 2.31 36.04 2.44
951 1031 7.815549 ACGTGGATTTTTATAGGCGAAAATTTT 59.184 29.630 2.28 2.28 36.04 1.82
952 1032 7.317390 ACGTGGATTTTTATAGGCGAAAATTT 58.683 30.769 0.00 0.00 36.04 1.82
953 1033 6.859017 ACGTGGATTTTTATAGGCGAAAATT 58.141 32.000 0.00 0.00 36.04 1.82
954 1034 6.445357 ACGTGGATTTTTATAGGCGAAAAT 57.555 33.333 0.00 0.00 37.96 1.82
955 1035 5.446206 CGACGTGGATTTTTATAGGCGAAAA 60.446 40.000 0.00 0.00 0.00 2.29
956 1036 4.033129 CGACGTGGATTTTTATAGGCGAAA 59.967 41.667 0.00 0.00 0.00 3.46
957 1037 3.552699 CGACGTGGATTTTTATAGGCGAA 59.447 43.478 0.00 0.00 0.00 4.70
958 1038 3.117794 CGACGTGGATTTTTATAGGCGA 58.882 45.455 0.00 0.00 0.00 5.54
959 1039 3.117794 TCGACGTGGATTTTTATAGGCG 58.882 45.455 0.00 0.00 0.00 5.52
960 1040 4.365723 TCTCGACGTGGATTTTTATAGGC 58.634 43.478 0.00 0.00 0.00 3.93
961 1041 4.444720 GCTCTCGACGTGGATTTTTATAGG 59.555 45.833 0.00 0.00 0.00 2.57
962 1042 5.041287 TGCTCTCGACGTGGATTTTTATAG 58.959 41.667 0.00 0.00 0.00 1.31
963 1043 5.001237 TGCTCTCGACGTGGATTTTTATA 57.999 39.130 0.00 0.00 0.00 0.98
964 1044 3.857052 TGCTCTCGACGTGGATTTTTAT 58.143 40.909 0.00 0.00 0.00 1.40
965 1045 3.057104 TCTGCTCTCGACGTGGATTTTTA 60.057 43.478 0.00 0.00 0.00 1.52
966 1046 2.069273 CTGCTCTCGACGTGGATTTTT 58.931 47.619 0.00 0.00 0.00 1.94
967 1047 1.272490 TCTGCTCTCGACGTGGATTTT 59.728 47.619 0.00 0.00 0.00 1.82
968 1048 0.888619 TCTGCTCTCGACGTGGATTT 59.111 50.000 0.00 0.00 0.00 2.17
969 1049 0.453793 CTCTGCTCTCGACGTGGATT 59.546 55.000 0.00 0.00 0.00 3.01
970 1050 1.999071 GCTCTGCTCTCGACGTGGAT 61.999 60.000 0.00 0.00 0.00 3.41
971 1051 2.691771 GCTCTGCTCTCGACGTGGA 61.692 63.158 0.00 0.00 0.00 4.02
972 1052 2.202544 GCTCTGCTCTCGACGTGG 60.203 66.667 0.00 0.00 0.00 4.94
973 1053 1.513800 CTGCTCTGCTCTCGACGTG 60.514 63.158 0.00 0.00 0.00 4.49
974 1054 1.643868 CTCTGCTCTGCTCTCGACGT 61.644 60.000 0.00 0.00 0.00 4.34
975 1055 1.062365 CTCTGCTCTGCTCTCGACG 59.938 63.158 0.00 0.00 0.00 5.12
976 1056 1.226660 GCTCTGCTCTGCTCTCGAC 60.227 63.158 0.00 0.00 0.00 4.20
977 1057 1.036481 ATGCTCTGCTCTGCTCTCGA 61.036 55.000 0.00 0.00 0.00 4.04
978 1058 0.595567 GATGCTCTGCTCTGCTCTCG 60.596 60.000 0.00 0.00 0.00 4.04
979 1059 0.595567 CGATGCTCTGCTCTGCTCTC 60.596 60.000 0.00 0.00 0.00 3.20
1020 1107 7.229707 TGTGGACTCTGTATCTAGCTTATCTTC 59.770 40.741 0.00 0.00 0.00 2.87
1049 1136 0.541392 TGCCTAGCTATGGTGTGTGG 59.459 55.000 0.00 0.00 0.00 4.17
1059 1183 3.323691 TGTTGTTTCTCTGTGCCTAGCTA 59.676 43.478 0.00 0.00 0.00 3.32
1066 1190 2.859806 GCATGGTGTTGTTTCTCTGTGC 60.860 50.000 0.00 0.00 0.00 4.57
1067 1191 2.602933 CGCATGGTGTTGTTTCTCTGTG 60.603 50.000 0.00 0.00 0.00 3.66
1155 1279 2.045926 GCCTTCATGCTCACCGGT 60.046 61.111 0.00 0.00 0.00 5.28
1207 1337 0.396435 AGCACCATGTCCGAGTTCAA 59.604 50.000 0.00 0.00 0.00 2.69
1236 1366 1.482621 CGAGCGCACATAGCAACGAT 61.483 55.000 11.47 0.00 46.13 3.73
1260 1390 2.203788 AGGGCGAGTCCAAGGACA 60.204 61.111 20.52 0.00 46.76 4.02
1319 1449 3.148279 GAGGGGCGTGATCGGAGT 61.148 66.667 0.00 0.00 37.56 3.85
1384 1514 4.796495 GTTGGCGGCGAAGGGGAT 62.796 66.667 12.98 0.00 0.00 3.85
1509 1639 1.793581 GACGCATGCGACATGGAAA 59.206 52.632 43.72 0.00 42.83 3.13
1732 1874 2.959507 AAACAGGGCACAAGAACAAC 57.040 45.000 0.00 0.00 0.00 3.32
1766 1908 3.001330 ACAACGCGATCTAGCTAAAATGC 59.999 43.478 15.93 0.00 34.40 3.56
1767 1909 4.778842 ACAACGCGATCTAGCTAAAATG 57.221 40.909 15.93 0.00 34.40 2.32
1768 1910 5.345702 TGTACAACGCGATCTAGCTAAAAT 58.654 37.500 15.93 0.00 34.40 1.82
1802 2318 9.522804 TTTACTGTACAAAATCAACCAATGAAC 57.477 29.630 0.00 0.00 42.54 3.18
1881 2397 0.313672 TTTTGCTGGGTCGAATGCAC 59.686 50.000 0.00 0.00 35.01 4.57
1955 2486 5.148502 AGAAGAAGAAGTGGACAAGAGGTA 58.851 41.667 0.00 0.00 0.00 3.08
2024 2568 5.933790 TGCAAATATTCGTACAGTCCAAAC 58.066 37.500 0.00 0.00 0.00 2.93
2033 2577 1.263217 CCGCCCTGCAAATATTCGTAC 59.737 52.381 0.00 0.00 0.00 3.67
2051 2595 6.254157 CACAATGAAAAAGGCAATAGATTCCG 59.746 38.462 0.00 0.00 0.00 4.30
2249 2826 0.107993 CACGTCCACATCAGGCATCT 60.108 55.000 0.00 0.00 0.00 2.90
2254 2831 1.205655 AGACATCACGTCCACATCAGG 59.794 52.381 0.00 0.00 46.69 3.86
2290 2867 5.604231 TCCCTGACTATTTATCAGCTGACAT 59.396 40.000 20.97 13.82 41.97 3.06
2323 2900 1.065564 AGCTTCCAGCAGGTCTCATTC 60.066 52.381 0.00 0.00 45.56 2.67
2335 2912 5.613358 AGATCAAACGTTAAAGCTTCCAG 57.387 39.130 0.00 0.00 0.00 3.86
2459 3087 7.124347 TGAACTAAACCACGACATGAATTAC 57.876 36.000 0.00 0.00 0.00 1.89
2592 3312 0.314935 CCAGATTGCGGCAAAACAGT 59.685 50.000 20.48 1.97 0.00 3.55
2595 3315 0.729140 CGACCAGATTGCGGCAAAAC 60.729 55.000 20.48 15.99 0.00 2.43
2596 3316 1.578926 CGACCAGATTGCGGCAAAA 59.421 52.632 20.48 0.00 0.00 2.44
2597 3317 2.331893 CCGACCAGATTGCGGCAAA 61.332 57.895 20.48 3.34 38.46 3.68
2598 3318 2.745884 CCGACCAGATTGCGGCAA 60.746 61.111 18.85 18.85 38.46 4.52
2599 3319 4.776322 CCCGACCAGATTGCGGCA 62.776 66.667 0.00 0.00 43.52 5.69
2602 3322 1.815421 CTTCCCCGACCAGATTGCG 60.815 63.158 0.00 0.00 0.00 4.85
2603 3323 0.035439 TTCTTCCCCGACCAGATTGC 60.035 55.000 0.00 0.00 0.00 3.56
2604 3324 1.555075 TCTTCTTCCCCGACCAGATTG 59.445 52.381 0.00 0.00 0.00 2.67
2605 3325 1.555533 GTCTTCTTCCCCGACCAGATT 59.444 52.381 0.00 0.00 0.00 2.40
2640 3545 2.223641 GGTCAGTGGTTTTCCCGTTTTC 60.224 50.000 0.00 0.00 39.73 2.29
2681 3586 9.655769 CATCGTTTGATGTTTTATCCTGAATAG 57.344 33.333 0.00 0.00 45.69 1.73
2705 3610 2.503356 GTCTCTTGATCTGGTGGGTCAT 59.497 50.000 0.00 0.00 0.00 3.06
2712 3617 5.753721 AGCTTTAAGTCTCTTGATCTGGT 57.246 39.130 0.00 0.00 0.00 4.00
2716 3621 6.228616 ACCCTAGCTTTAAGTCTCTTGATC 57.771 41.667 0.00 0.00 0.00 2.92
2717 3622 6.628644 AACCCTAGCTTTAAGTCTCTTGAT 57.371 37.500 0.00 0.00 0.00 2.57
2718 3623 6.042781 TGAAACCCTAGCTTTAAGTCTCTTGA 59.957 38.462 0.00 0.00 0.00 3.02
2720 3625 6.435292 TGAAACCCTAGCTTTAAGTCTCTT 57.565 37.500 0.00 0.00 0.00 2.85
2721 3626 6.435292 TTGAAACCCTAGCTTTAAGTCTCT 57.565 37.500 0.00 0.00 0.00 3.10
2722 3627 7.689446 AATTGAAACCCTAGCTTTAAGTCTC 57.311 36.000 0.00 0.00 0.00 3.36
2723 3628 9.582648 TTTAATTGAAACCCTAGCTTTAAGTCT 57.417 29.630 0.00 0.00 0.00 3.24
2874 4501 2.100749 CACCTTTGCCGAAAAGTTCCTT 59.899 45.455 8.97 0.00 43.32 3.36
2964 4599 8.689251 TTAGATACGAGATGCAAAGTATATGC 57.311 34.615 0.00 0.00 44.08 3.14
2997 4632 4.851843 TCCATCATCACAAAAGAGCAGAT 58.148 39.130 0.00 0.00 0.00 2.90
3038 4678 5.588648 AGGTAGATCTTTGAGAGAAGACGAG 59.411 44.000 0.00 0.00 38.39 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.