Multiple sequence alignment - TraesCS7A01G552500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G552500 chr7A 100.000 3264 0 0 1 3264 725439988 725443251 0.000000e+00 6028.0
1 TraesCS7A01G552500 chr7A 90.909 209 16 2 2489 2696 430840931 430841137 8.920000e-71 278.0
2 TraesCS7A01G552500 chr7A 89.385 179 14 3 2933 3106 639578809 639578987 1.520000e-53 220.0
3 TraesCS7A01G552500 chrUn 89.926 2283 176 36 20 2278 88389445 88387193 0.000000e+00 2892.0
4 TraesCS7A01G552500 chr7D 89.780 1409 96 25 20 1413 629385763 629387138 0.000000e+00 1760.0
5 TraesCS7A01G552500 chr7D 89.959 976 56 20 1438 2403 629387130 629388073 0.000000e+00 1221.0
6 TraesCS7A01G552500 chr7D 89.781 411 20 6 2099 2493 629389098 629389502 1.040000e-139 507.0
7 TraesCS7A01G552500 chr7D 92.118 203 13 2 2491 2692 592727407 592727607 1.920000e-72 283.0
8 TraesCS7A01G552500 chr7D 92.424 132 8 2 2803 2933 629389491 629389621 1.550000e-43 187.0
9 TraesCS7A01G552500 chr7D 84.916 179 19 6 2937 3107 575899167 575898989 1.200000e-39 174.0
10 TraesCS7A01G552500 chr6B 92.754 207 11 3 2490 2695 214870607 214870404 2.460000e-76 296.0
11 TraesCS7A01G552500 chr6B 84.916 179 21 5 2933 3105 484537740 484537918 3.350000e-40 176.0
12 TraesCS7A01G552500 chr6D 91.748 206 14 2 2491 2695 410373780 410373577 1.920000e-72 283.0
13 TraesCS7A01G552500 chr5A 91.748 206 14 2 2491 2695 597832290 597832087 1.920000e-72 283.0
14 TraesCS7A01G552500 chr2D 92.118 203 13 2 2491 2692 315858988 315859188 1.920000e-72 283.0
15 TraesCS7A01G552500 chr2D 86.550 171 18 4 2933 3100 590938002 590937834 2.000000e-42 183.0
16 TraesCS7A01G552500 chr2D 82.927 205 19 12 2924 3114 110844147 110844349 1.560000e-38 171.0
17 TraesCS7A01G552500 chr3D 90.323 217 16 4 2482 2696 305497142 305497355 2.480000e-71 279.0
18 TraesCS7A01G552500 chr3D 86.932 176 18 4 2933 3104 425154712 425154538 3.320000e-45 193.0
19 TraesCS7A01G552500 chr3A 90.233 215 16 4 2485 2696 741576332 741576120 3.210000e-70 276.0
20 TraesCS7A01G552500 chr3A 92.063 63 4 1 2756 2817 42200432 42200494 1.610000e-13 87.9
21 TraesCS7A01G552500 chr2A 90.865 208 15 3 2486 2692 42775730 42775934 3.210000e-70 276.0
22 TraesCS7A01G552500 chr4B 88.525 183 15 3 2929 3105 27243828 27243646 1.970000e-52 217.0
23 TraesCS7A01G552500 chr4B 87.283 173 13 7 2933 3096 147699471 147699299 4.300000e-44 189.0
24 TraesCS7A01G552500 chr4B 86.207 58 8 0 2757 2814 539299520 539299577 2.720000e-06 63.9
25 TraesCS7A01G552500 chr4D 83.902 205 26 4 2489 2692 49887400 49887598 4.300000e-44 189.0
26 TraesCS7A01G552500 chr4D 95.833 48 1 1 2758 2804 477410345 477410298 3.490000e-10 76.8
27 TraesCS7A01G552500 chr4A 85.795 176 21 4 2933 3105 542995829 542995655 2.000000e-42 183.0
28 TraesCS7A01G552500 chr7B 90.741 108 9 1 2826 2933 688160279 688160173 3.390000e-30 143.0
29 TraesCS7A01G552500 chr5B 91.803 61 5 0 2758 2818 685620946 685620886 5.800000e-13 86.1
30 TraesCS7A01G552500 chr6A 91.667 48 4 0 2758 2805 76975937 76975984 2.100000e-07 67.6
31 TraesCS7A01G552500 chr1B 93.333 45 3 0 2757 2801 561502605 561502649 2.100000e-07 67.6
32 TraesCS7A01G552500 chr1A 95.238 42 2 0 2719 2760 536359259 536359300 2.100000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G552500 chr7A 725439988 725443251 3263 False 6028.00 6028 100.000 1 3264 1 chr7A.!!$F3 3263
1 TraesCS7A01G552500 chrUn 88387193 88389445 2252 True 2892.00 2892 89.926 20 2278 1 chrUn.!!$R1 2258
2 TraesCS7A01G552500 chr7D 629385763 629389621 3858 False 918.75 1760 90.486 20 2933 4 chr7D.!!$F2 2913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
463 467 0.036010 AGAAGACATTCAGGTGGCGG 60.036 55.0 0.0 0.0 37.94 6.13 F
465 469 0.110486 AAGACATTCAGGTGGCGGTT 59.890 50.0 0.0 0.0 30.43 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1414 1433 0.39113 CCGGCGAGGAAATTCTGACA 60.391 55.0 9.3 0.0 45.0 3.58 R
2325 3689 0.60864 CAGCCCACTTACGACCTCTT 59.391 55.0 0.0 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 0.902984 TACCACGACCATCAGCCTGT 60.903 55.000 0.00 0.00 0.00 4.00
124 125 1.105167 CATCGGCGGGGACTACTACA 61.105 60.000 7.21 0.00 0.00 2.74
171 172 3.322466 CGGAGGAGGGCAAGGTGT 61.322 66.667 0.00 0.00 0.00 4.16
447 451 1.890894 CGCGGAGGAGGAAGAAGAA 59.109 57.895 0.00 0.00 0.00 2.52
450 454 1.134936 GCGGAGGAGGAAGAAGAAGAC 60.135 57.143 0.00 0.00 0.00 3.01
451 455 2.171840 CGGAGGAGGAAGAAGAAGACA 58.828 52.381 0.00 0.00 0.00 3.41
452 456 2.763448 CGGAGGAGGAAGAAGAAGACAT 59.237 50.000 0.00 0.00 0.00 3.06
454 458 4.679372 CGGAGGAGGAAGAAGAAGACATTC 60.679 50.000 0.00 0.00 35.52 2.67
455 459 4.223923 GGAGGAGGAAGAAGAAGACATTCA 59.776 45.833 0.00 0.00 37.94 2.57
456 460 5.418676 GAGGAGGAAGAAGAAGACATTCAG 58.581 45.833 0.00 0.00 37.94 3.02
457 461 4.224818 AGGAGGAAGAAGAAGACATTCAGG 59.775 45.833 0.00 0.00 37.94 3.86
458 462 4.019771 GGAGGAAGAAGAAGACATTCAGGT 60.020 45.833 0.00 0.00 37.94 4.00
463 467 0.036010 AGAAGACATTCAGGTGGCGG 60.036 55.000 0.00 0.00 37.94 6.13
465 469 0.110486 AAGACATTCAGGTGGCGGTT 59.890 50.000 0.00 0.00 30.43 4.44
468 472 0.398696 ACATTCAGGTGGCGGTTGTA 59.601 50.000 0.00 0.00 0.00 2.41
469 473 1.004277 ACATTCAGGTGGCGGTTGTAT 59.996 47.619 0.00 0.00 0.00 2.29
470 474 1.670811 CATTCAGGTGGCGGTTGTATC 59.329 52.381 0.00 0.00 0.00 2.24
472 476 1.855295 TCAGGTGGCGGTTGTATCTA 58.145 50.000 0.00 0.00 0.00 1.98
473 477 1.479323 TCAGGTGGCGGTTGTATCTAC 59.521 52.381 0.00 0.00 0.00 2.59
483 487 4.622220 GCGGTTGTATCTACCCTGAAGAAA 60.622 45.833 0.00 0.00 31.75 2.52
484 488 5.671493 CGGTTGTATCTACCCTGAAGAAAT 58.329 41.667 0.00 0.00 31.75 2.17
485 489 6.113411 CGGTTGTATCTACCCTGAAGAAATT 58.887 40.000 0.00 0.00 31.75 1.82
489 496 9.010029 GTTGTATCTACCCTGAAGAAATTTGAA 57.990 33.333 0.00 0.00 0.00 2.69
491 498 6.765915 ATCTACCCTGAAGAAATTTGAAGC 57.234 37.500 0.00 0.00 0.00 3.86
496 503 4.483311 CCTGAAGAAATTTGAAGCAGAGC 58.517 43.478 0.00 0.00 0.00 4.09
503 513 0.820482 TTTGAAGCAGAGCAGCAGCA 60.820 50.000 3.17 0.00 45.49 4.41
504 514 1.235281 TTGAAGCAGAGCAGCAGCAG 61.235 55.000 3.17 0.00 45.49 4.24
507 517 3.805307 GCAGAGCAGCAGCAGCAG 61.805 66.667 12.92 0.00 45.49 4.24
521 531 1.963338 AGCAGCGTGGTTCAGAAGC 60.963 57.895 5.33 5.33 0.00 3.86
547 557 2.353958 CCATGGAGGCTGCAGTGT 59.646 61.111 15.56 2.11 0.00 3.55
548 558 1.748122 CCATGGAGGCTGCAGTGTC 60.748 63.158 15.56 11.96 0.00 3.67
549 559 1.298993 CATGGAGGCTGCAGTGTCT 59.701 57.895 15.56 10.65 0.00 3.41
550 560 1.025113 CATGGAGGCTGCAGTGTCTG 61.025 60.000 15.56 3.35 34.12 3.51
551 561 1.196766 ATGGAGGCTGCAGTGTCTGA 61.197 55.000 15.56 4.23 32.44 3.27
552 562 1.372683 GGAGGCTGCAGTGTCTGAA 59.627 57.895 16.64 0.00 32.44 3.02
560 570 3.396560 CTGCAGTGTCTGAAGAACATGA 58.603 45.455 5.25 0.00 39.42 3.07
564 574 3.672397 CAGTGTCTGAAGAACATGACGAG 59.328 47.826 0.00 0.00 32.44 4.18
580 590 1.421485 GAGCATGACCAAACGAGCG 59.579 57.895 0.00 0.00 0.00 5.03
581 591 1.970917 GAGCATGACCAAACGAGCGG 61.971 60.000 0.00 0.00 0.00 5.52
637 650 1.228583 ATAGCGATCCTCAGGCCGA 60.229 57.895 9.20 0.00 0.00 5.54
642 655 3.140225 GATCCTCAGGCCGACGACC 62.140 68.421 0.00 0.00 0.00 4.79
643 656 3.957435 ATCCTCAGGCCGACGACCA 62.957 63.158 2.14 0.00 0.00 4.02
762 775 2.726351 GGAGGTGAAGGAGAGGGCG 61.726 68.421 0.00 0.00 0.00 6.13
786 799 1.946267 GCTCAAGGCCGAAACGAAA 59.054 52.632 0.00 0.00 34.27 3.46
842 855 1.306568 AGAGGAGAGGCTGGGGAAC 60.307 63.158 0.00 0.00 0.00 3.62
1061 1074 2.435059 GAAGACCACGGGCAGAGC 60.435 66.667 0.00 0.00 0.00 4.09
1170 1183 2.014554 GAAGCTGCACGACGACGAA 61.015 57.895 15.32 0.00 42.66 3.85
1173 1186 3.470567 CTGCACGACGACGAAGGC 61.471 66.667 15.32 14.18 42.66 4.35
1174 1187 4.273257 TGCACGACGACGAAGGCA 62.273 61.111 15.32 16.49 42.66 4.75
1320 1333 2.406002 TTTTCAGAGGGACGGTGGCC 62.406 60.000 0.00 0.00 0.00 5.36
1414 1433 4.824515 CCTCTCCGGCGTCTCCCT 62.825 72.222 6.01 0.00 0.00 4.20
1429 1448 2.497675 TCTCCCTGTCAGAATTTCCTCG 59.502 50.000 0.00 0.00 0.00 4.63
1431 1450 1.373570 CCTGTCAGAATTTCCTCGCC 58.626 55.000 0.00 0.00 0.00 5.54
1433 1452 0.391130 TGTCAGAATTTCCTCGCCGG 60.391 55.000 0.00 0.00 0.00 6.13
1434 1453 0.108329 GTCAGAATTTCCTCGCCGGA 60.108 55.000 5.05 0.00 41.06 5.14
1435 1454 0.108329 TCAGAATTTCCTCGCCGGAC 60.108 55.000 5.05 0.00 42.97 4.79
1436 1455 0.108138 CAGAATTTCCTCGCCGGACT 60.108 55.000 5.05 0.00 42.97 3.85
1437 1456 0.108138 AGAATTTCCTCGCCGGACTG 60.108 55.000 5.05 0.00 42.97 3.51
1438 1457 1.078426 AATTTCCTCGCCGGACTGG 60.078 57.895 5.05 2.62 42.97 4.00
1578 1605 4.576879 TGCTGCATTCCATATGATCTCTC 58.423 43.478 3.65 0.00 0.00 3.20
1609 1636 2.314561 TGCGTTTTGCTGATTCTTCG 57.685 45.000 0.00 0.00 46.63 3.79
1618 1645 2.877786 TGCTGATTCTTCGTTTGCAGAA 59.122 40.909 0.00 0.00 33.55 3.02
1624 1651 3.026630 TCTTCGTTTGCAGAATCGAGT 57.973 42.857 0.00 0.00 35.34 4.18
1655 1682 1.070105 CCCAGGTGTTCGTCGGAAA 59.930 57.895 0.00 0.00 33.05 3.13
1821 1848 3.810812 GAGGACGGACTCGATCGT 58.189 61.111 15.94 8.04 42.67 3.73
1828 1855 1.222300 CGGACTCGATCGTCATCTCT 58.778 55.000 15.94 0.00 39.00 3.10
1909 1936 3.077556 GGCGCAGGAGAGGAGGAA 61.078 66.667 10.83 0.00 0.00 3.36
2041 2068 0.949105 GGGTCGTCGAGTGCAACAAT 60.949 55.000 0.00 0.00 41.43 2.71
2089 2116 1.258445 GGAGGGAGCTGGAAGACGAA 61.258 60.000 0.00 0.00 34.07 3.85
2270 2297 0.308993 GCTGTTTGTCTGACTGCACC 59.691 55.000 9.51 0.00 40.40 5.01
2272 2299 2.292267 CTGTTTGTCTGACTGCACCTT 58.708 47.619 9.51 0.00 0.00 3.50
2313 3677 1.871039 GCTCGAGCAGGTTTTGTACAA 59.129 47.619 31.91 3.59 41.59 2.41
2314 3678 2.289547 GCTCGAGCAGGTTTTGTACAAA 59.710 45.455 31.91 17.01 41.59 2.83
2315 3679 3.242936 GCTCGAGCAGGTTTTGTACAAAA 60.243 43.478 31.91 26.05 41.59 2.44
2316 3680 4.732355 GCTCGAGCAGGTTTTGTACAAAAA 60.732 41.667 30.09 14.47 40.18 1.94
2317 3681 4.915704 TCGAGCAGGTTTTGTACAAAAAG 58.084 39.130 30.09 23.25 41.37 2.27
2349 3713 2.358615 CGTAAGTGGGCTGCAGCA 60.359 61.111 37.63 18.09 44.36 4.41
2486 3856 9.956720 CACTGTTCTTTTTGTTGAGAAGAATAT 57.043 29.630 0.00 0.00 40.36 1.28
2495 3865 9.436957 TTTTGTTGAGAAGAATATGAGTACTCC 57.563 33.333 20.11 4.25 0.00 3.85
2496 3866 7.113658 TGTTGAGAAGAATATGAGTACTCCC 57.886 40.000 20.11 4.61 0.00 4.30
2497 3867 6.897966 TGTTGAGAAGAATATGAGTACTCCCT 59.102 38.462 20.11 10.02 0.00 4.20
2498 3868 7.068839 TGTTGAGAAGAATATGAGTACTCCCTC 59.931 40.741 20.11 10.67 0.00 4.30
2499 3869 6.071984 TGAGAAGAATATGAGTACTCCCTCC 58.928 44.000 20.11 5.94 0.00 4.30
2500 3870 5.074115 AGAAGAATATGAGTACTCCCTCCG 58.926 45.833 20.11 0.00 0.00 4.63
2501 3871 4.456662 AGAATATGAGTACTCCCTCCGT 57.543 45.455 20.11 0.00 0.00 4.69
2502 3872 4.805744 AGAATATGAGTACTCCCTCCGTT 58.194 43.478 20.11 6.59 0.00 4.44
2503 3873 5.209659 AGAATATGAGTACTCCCTCCGTTT 58.790 41.667 20.11 4.53 0.00 3.60
2504 3874 5.661759 AGAATATGAGTACTCCCTCCGTTTT 59.338 40.000 20.11 3.08 0.00 2.43
2505 3875 5.952347 ATATGAGTACTCCCTCCGTTTTT 57.048 39.130 20.11 0.00 0.00 1.94
2506 3876 7.343833 AGAATATGAGTACTCCCTCCGTTTTTA 59.656 37.037 20.11 0.00 0.00 1.52
2507 3877 5.952347 ATGAGTACTCCCTCCGTTTTTAT 57.048 39.130 20.11 0.00 0.00 1.40
2508 3878 5.750352 TGAGTACTCCCTCCGTTTTTATT 57.250 39.130 20.11 0.00 0.00 1.40
2509 3879 6.117975 TGAGTACTCCCTCCGTTTTTATTT 57.882 37.500 20.11 0.00 0.00 1.40
2510 3880 7.243604 TGAGTACTCCCTCCGTTTTTATTTA 57.756 36.000 20.11 0.00 0.00 1.40
2511 3881 7.099120 TGAGTACTCCCTCCGTTTTTATTTAC 58.901 38.462 20.11 0.00 0.00 2.01
2512 3882 7.038799 TGAGTACTCCCTCCGTTTTTATTTACT 60.039 37.037 20.11 0.00 0.00 2.24
2513 3883 7.326454 AGTACTCCCTCCGTTTTTATTTACTC 58.674 38.462 0.00 0.00 0.00 2.59
2514 3884 6.370186 ACTCCCTCCGTTTTTATTTACTCT 57.630 37.500 0.00 0.00 0.00 3.24
2515 3885 6.171213 ACTCCCTCCGTTTTTATTTACTCTG 58.829 40.000 0.00 0.00 0.00 3.35
2516 3886 4.939439 TCCCTCCGTTTTTATTTACTCTGC 59.061 41.667 0.00 0.00 0.00 4.26
2517 3887 4.698304 CCCTCCGTTTTTATTTACTCTGCA 59.302 41.667 0.00 0.00 0.00 4.41
2518 3888 5.357032 CCCTCCGTTTTTATTTACTCTGCAT 59.643 40.000 0.00 0.00 0.00 3.96
2519 3889 6.540914 CCCTCCGTTTTTATTTACTCTGCATA 59.459 38.462 0.00 0.00 0.00 3.14
2520 3890 7.228706 CCCTCCGTTTTTATTTACTCTGCATAT 59.771 37.037 0.00 0.00 0.00 1.78
2521 3891 9.268268 CCTCCGTTTTTATTTACTCTGCATATA 57.732 33.333 0.00 0.00 0.00 0.86
2535 3905 8.470657 ACTCTGCATATATTAGAGTTGACTGA 57.529 34.615 17.71 0.45 46.56 3.41
2536 3906 8.918116 ACTCTGCATATATTAGAGTTGACTGAA 58.082 33.333 17.71 0.00 46.56 3.02
2537 3907 9.409312 CTCTGCATATATTAGAGTTGACTGAAG 57.591 37.037 12.59 0.00 34.62 3.02
2538 3908 8.918116 TCTGCATATATTAGAGTTGACTGAAGT 58.082 33.333 0.00 0.00 0.00 3.01
2539 3909 9.190858 CTGCATATATTAGAGTTGACTGAAGTC 57.809 37.037 3.41 3.41 44.97 3.01
2567 3937 8.972458 ACTTTGTAAAGTTTGCCCAAATTTAT 57.028 26.923 4.25 0.00 46.52 1.40
2575 3945 9.620259 AAAGTTTGCCCAAATTTATAGAAAACA 57.380 25.926 15.18 0.00 31.37 2.83
2576 3946 9.620259 AAGTTTGCCCAAATTTATAGAAAACAA 57.380 25.926 15.18 1.77 30.09 2.83
2577 3947 9.791801 AGTTTGCCCAAATTTATAGAAAACAAT 57.208 25.926 15.18 0.39 32.36 2.71
2696 4066 9.528018 TTGTTTAGAAACTTTATCAAAGCTTGG 57.472 29.630 0.00 0.00 42.27 3.61
2697 4067 8.141268 TGTTTAGAAACTTTATCAAAGCTTGGG 58.859 33.333 0.00 0.00 42.27 4.12
2698 4068 5.139435 AGAAACTTTATCAAAGCTTGGGC 57.861 39.130 0.00 0.00 42.27 5.36
2699 4069 4.588528 AGAAACTTTATCAAAGCTTGGGCA 59.411 37.500 0.00 0.00 42.27 5.36
2700 4070 5.246883 AGAAACTTTATCAAAGCTTGGGCAT 59.753 36.000 0.00 0.00 42.27 4.40
2701 4071 6.437162 AGAAACTTTATCAAAGCTTGGGCATA 59.563 34.615 0.00 0.00 42.27 3.14
2702 4072 6.603940 AACTTTATCAAAGCTTGGGCATAA 57.396 33.333 0.00 0.00 42.27 1.90
2703 4073 6.603940 ACTTTATCAAAGCTTGGGCATAAA 57.396 33.333 0.00 3.78 42.27 1.40
2704 4074 7.186570 ACTTTATCAAAGCTTGGGCATAAAT 57.813 32.000 0.00 0.00 42.27 1.40
2705 4075 8.305046 ACTTTATCAAAGCTTGGGCATAAATA 57.695 30.769 0.00 0.00 42.27 1.40
2706 4076 8.757877 ACTTTATCAAAGCTTGGGCATAAATAA 58.242 29.630 0.00 0.00 42.27 1.40
2707 4077 9.598517 CTTTATCAAAGCTTGGGCATAAATAAA 57.401 29.630 0.00 1.65 41.70 1.40
2708 4078 9.950496 TTTATCAAAGCTTGGGCATAAATAAAA 57.050 25.926 0.00 0.00 41.70 1.52
2709 4079 9.950496 TTATCAAAGCTTGGGCATAAATAAAAA 57.050 25.926 0.00 0.00 41.70 1.94
2710 4080 7.903995 TCAAAGCTTGGGCATAAATAAAAAG 57.096 32.000 0.00 0.00 41.70 2.27
2711 4081 7.449247 TCAAAGCTTGGGCATAAATAAAAAGT 58.551 30.769 0.00 0.00 41.70 2.66
2712 4082 7.936301 TCAAAGCTTGGGCATAAATAAAAAGTT 59.064 29.630 0.00 0.00 41.70 2.66
2713 4083 8.567104 CAAAGCTTGGGCATAAATAAAAAGTTT 58.433 29.630 0.00 0.00 41.70 2.66
2714 4084 7.671495 AGCTTGGGCATAAATAAAAAGTTTG 57.329 32.000 0.00 0.00 41.70 2.93
2715 4085 6.149308 AGCTTGGGCATAAATAAAAAGTTTGC 59.851 34.615 0.00 0.00 41.70 3.68
2716 4086 6.622679 GCTTGGGCATAAATAAAAAGTTTGCC 60.623 38.462 2.48 2.48 38.54 4.52
2717 4087 6.120507 TGGGCATAAATAAAAAGTTTGCCT 57.879 33.333 10.50 0.00 39.60 4.75
2718 4088 7.246171 TGGGCATAAATAAAAAGTTTGCCTA 57.754 32.000 10.50 2.13 39.60 3.93
2719 4089 7.680730 TGGGCATAAATAAAAAGTTTGCCTAA 58.319 30.769 10.50 0.00 39.60 2.69
2720 4090 8.325046 TGGGCATAAATAAAAAGTTTGCCTAAT 58.675 29.630 10.50 0.00 39.60 1.73
2721 4091 8.611757 GGGCATAAATAAAAAGTTTGCCTAATG 58.388 33.333 10.50 2.99 39.60 1.90
2722 4092 8.122330 GGCATAAATAAAAAGTTTGCCTAATGC 58.878 33.333 3.87 8.07 41.77 3.56
2723 4093 8.882736 GCATAAATAAAAAGTTTGCCTAATGCT 58.117 29.630 11.69 0.00 42.00 3.79
2726 4096 8.900983 AAATAAAAAGTTTGCCTAATGCTTGA 57.099 26.923 0.00 0.00 42.00 3.02
2727 4097 7.889589 ATAAAAAGTTTGCCTAATGCTTGAC 57.110 32.000 0.00 0.00 42.00 3.18
2728 4098 5.535753 AAAAGTTTGCCTAATGCTTGACT 57.464 34.783 0.00 0.00 42.00 3.41
2729 4099 5.535753 AAAGTTTGCCTAATGCTTGACTT 57.464 34.783 0.00 0.00 42.00 3.01
2730 4100 5.535753 AAGTTTGCCTAATGCTTGACTTT 57.464 34.783 0.00 0.00 42.00 2.66
2731 4101 4.874970 AGTTTGCCTAATGCTTGACTTTG 58.125 39.130 0.00 0.00 42.00 2.77
2732 4102 4.584325 AGTTTGCCTAATGCTTGACTTTGA 59.416 37.500 0.00 0.00 42.00 2.69
2733 4103 5.244626 AGTTTGCCTAATGCTTGACTTTGAT 59.755 36.000 0.00 0.00 42.00 2.57
2734 4104 4.970662 TGCCTAATGCTTGACTTTGATC 57.029 40.909 0.00 0.00 42.00 2.92
2735 4105 4.334552 TGCCTAATGCTTGACTTTGATCA 58.665 39.130 0.00 0.00 42.00 2.92
2736 4106 4.766373 TGCCTAATGCTTGACTTTGATCAA 59.234 37.500 3.38 3.38 42.00 2.57
2737 4107 5.243507 TGCCTAATGCTTGACTTTGATCAAA 59.756 36.000 19.45 19.45 38.12 2.69
2738 4108 6.071221 TGCCTAATGCTTGACTTTGATCAAAT 60.071 34.615 20.76 11.31 38.12 2.32
2739 4109 6.474751 GCCTAATGCTTGACTTTGATCAAATC 59.525 38.462 20.76 18.45 38.12 2.17
2740 4110 7.630082 GCCTAATGCTTGACTTTGATCAAATCT 60.630 37.037 20.76 9.49 38.12 2.40
2741 4111 8.896744 CCTAATGCTTGACTTTGATCAAATCTA 58.103 33.333 20.76 14.80 38.12 1.98
2746 4116 8.390354 TGCTTGACTTTGATCAAATCTAATACG 58.610 33.333 20.76 9.40 38.12 3.06
2747 4117 7.374491 GCTTGACTTTGATCAAATCTAATACGC 59.626 37.037 20.76 12.02 38.12 4.42
2748 4118 6.933130 TGACTTTGATCAAATCTAATACGCG 58.067 36.000 20.76 3.53 0.00 6.01
2749 4119 6.019075 TGACTTTGATCAAATCTAATACGCGG 60.019 38.462 20.76 7.58 0.00 6.46
2750 4120 6.046593 ACTTTGATCAAATCTAATACGCGGA 58.953 36.000 20.76 0.00 0.00 5.54
2751 4121 5.900339 TTGATCAAATCTAATACGCGGAC 57.100 39.130 12.47 0.00 0.00 4.79
2752 4122 5.196341 TGATCAAATCTAATACGCGGACT 57.804 39.130 12.47 0.00 0.00 3.85
2753 4123 6.321848 TGATCAAATCTAATACGCGGACTA 57.678 37.500 12.47 0.00 0.00 2.59
2754 4124 6.741109 TGATCAAATCTAATACGCGGACTAA 58.259 36.000 12.47 0.00 0.00 2.24
2755 4125 7.204604 TGATCAAATCTAATACGCGGACTAAA 58.795 34.615 12.47 0.00 0.00 1.85
2756 4126 7.870954 TGATCAAATCTAATACGCGGACTAAAT 59.129 33.333 12.47 0.00 0.00 1.40
2757 4127 9.350357 GATCAAATCTAATACGCGGACTAAATA 57.650 33.333 12.47 0.00 0.00 1.40
2758 4128 9.701098 ATCAAATCTAATACGCGGACTAAATAA 57.299 29.630 12.47 0.00 0.00 1.40
2759 4129 9.531942 TCAAATCTAATACGCGGACTAAATAAA 57.468 29.630 12.47 0.00 0.00 1.40
2760 4130 9.793245 CAAATCTAATACGCGGACTAAATAAAG 57.207 33.333 12.47 0.00 0.00 1.85
2761 4131 6.998258 TCTAATACGCGGACTAAATAAAGC 57.002 37.500 12.47 0.00 0.00 3.51
2762 4132 6.742109 TCTAATACGCGGACTAAATAAAGCT 58.258 36.000 12.47 0.00 0.00 3.74
2763 4133 7.205297 TCTAATACGCGGACTAAATAAAGCTT 58.795 34.615 12.47 0.00 0.00 3.74
2764 4134 5.652744 ATACGCGGACTAAATAAAGCTTG 57.347 39.130 12.47 0.00 0.00 4.01
2765 4135 3.592059 ACGCGGACTAAATAAAGCTTGA 58.408 40.909 12.47 0.00 0.00 3.02
2766 4136 3.370061 ACGCGGACTAAATAAAGCTTGAC 59.630 43.478 12.47 0.00 0.00 3.18
2767 4137 3.617263 CGCGGACTAAATAAAGCTTGACT 59.383 43.478 0.00 0.00 0.00 3.41
2768 4138 4.092968 CGCGGACTAAATAAAGCTTGACTT 59.907 41.667 0.00 0.00 41.70 3.01
2779 4149 5.859205 AAAGCTTGACTTTGACCAAAGAT 57.141 34.783 24.31 11.69 47.00 2.40
2780 4150 6.959639 AAAGCTTGACTTTGACCAAAGATA 57.040 33.333 24.31 12.33 47.00 1.98
2781 4151 7.346751 AAAGCTTGACTTTGACCAAAGATAA 57.653 32.000 24.31 17.24 47.00 1.75
2782 4152 7.955918 AAAGCTTGACTTTGACCAAAGATAAT 58.044 30.769 24.31 6.33 47.00 1.28
2783 4153 9.077885 AAAGCTTGACTTTGACCAAAGATAATA 57.922 29.630 24.31 7.00 47.00 0.98
2790 4160 6.730960 TTTGACCAAAGATAATACGTGGAC 57.269 37.500 0.00 0.00 33.39 4.02
2791 4161 5.670792 TGACCAAAGATAATACGTGGACT 57.329 39.130 0.00 0.00 33.39 3.85
2792 4162 6.778834 TGACCAAAGATAATACGTGGACTA 57.221 37.500 0.00 0.00 33.39 2.59
2793 4163 7.172868 TGACCAAAGATAATACGTGGACTAA 57.827 36.000 0.00 0.00 33.39 2.24
2794 4164 7.613585 TGACCAAAGATAATACGTGGACTAAA 58.386 34.615 0.00 0.00 33.39 1.85
2795 4165 8.262227 TGACCAAAGATAATACGTGGACTAAAT 58.738 33.333 0.00 0.00 33.39 1.40
2796 4166 9.754382 GACCAAAGATAATACGTGGACTAAATA 57.246 33.333 0.00 0.00 33.39 1.40
2858 4228 8.437360 TGAACTCATGTTATTACCAAGCATAG 57.563 34.615 0.00 0.00 36.39 2.23
2859 4229 7.498900 TGAACTCATGTTATTACCAAGCATAGG 59.501 37.037 0.00 0.00 36.39 2.57
2875 4245 8.080417 CCAAGCATAGGTTTTCATTCATATCAG 58.920 37.037 0.00 0.00 0.00 2.90
2892 4262 9.462606 TTCATATCAGTTCTACTGTTGAGACTA 57.537 33.333 6.71 0.00 46.03 2.59
2948 4318 8.940768 ATTATCTTTCAGTCTTGCTAAGTCTC 57.059 34.615 0.00 0.00 0.00 3.36
2949 4319 5.791336 TCTTTCAGTCTTGCTAAGTCTCA 57.209 39.130 0.00 0.00 0.00 3.27
2950 4320 5.777802 TCTTTCAGTCTTGCTAAGTCTCAG 58.222 41.667 0.00 0.00 0.00 3.35
2951 4321 5.303078 TCTTTCAGTCTTGCTAAGTCTCAGT 59.697 40.000 0.00 0.00 0.00 3.41
2952 4322 4.775058 TCAGTCTTGCTAAGTCTCAGTC 57.225 45.455 0.00 0.00 0.00 3.51
2953 4323 3.189495 TCAGTCTTGCTAAGTCTCAGTCG 59.811 47.826 0.00 0.00 0.00 4.18
2954 4324 3.189495 CAGTCTTGCTAAGTCTCAGTCGA 59.811 47.826 0.00 0.00 0.00 4.20
2955 4325 3.189702 AGTCTTGCTAAGTCTCAGTCGAC 59.810 47.826 7.70 7.70 0.00 4.20
2956 4326 3.189702 GTCTTGCTAAGTCTCAGTCGACT 59.810 47.826 13.58 13.58 45.73 4.18
2957 4327 4.392445 GTCTTGCTAAGTCTCAGTCGACTA 59.608 45.833 19.57 0.00 43.14 2.59
2958 4328 5.001874 TCTTGCTAAGTCTCAGTCGACTAA 58.998 41.667 19.57 1.94 43.14 2.24
2959 4329 4.948608 TGCTAAGTCTCAGTCGACTAAG 57.051 45.455 19.57 14.47 43.14 2.18
2960 4330 4.576879 TGCTAAGTCTCAGTCGACTAAGA 58.423 43.478 19.57 17.01 43.14 2.10
2961 4331 4.392445 TGCTAAGTCTCAGTCGACTAAGAC 59.608 45.833 33.03 33.03 43.14 3.01
2965 4335 3.680937 AGTCTCAGTCGACTAAGACTTCG 59.319 47.826 35.84 15.67 46.73 3.79
2966 4336 4.800249 AGTCTCAGTCGACTAAGACTTCGT 60.800 45.833 35.84 20.46 46.73 3.85
2967 4337 6.255330 AGTCTCAGTCGACTAAGACTTCGTT 61.255 44.000 35.84 20.14 46.73 3.85
2968 4338 7.013787 AGTCTCAGTCGACTAAGACTTCGTTA 61.014 42.308 35.84 5.55 46.73 3.18
2969 4339 8.428410 AGTCTCAGTCGACTAAGACTTCGTTAA 61.428 40.741 35.84 4.85 46.73 2.01
2983 4353 4.686554 ACTTCGTTAAGTCTCAGTTGATGC 59.313 41.667 0.00 0.00 42.42 3.91
2984 4354 4.521130 TCGTTAAGTCTCAGTTGATGCT 57.479 40.909 0.00 0.00 0.00 3.79
2985 4355 5.638596 TCGTTAAGTCTCAGTTGATGCTA 57.361 39.130 0.00 0.00 0.00 3.49
2986 4356 6.208988 TCGTTAAGTCTCAGTTGATGCTAT 57.791 37.500 0.00 0.00 0.00 2.97
2987 4357 7.329588 TCGTTAAGTCTCAGTTGATGCTATA 57.670 36.000 0.00 0.00 0.00 1.31
2988 4358 7.941919 TCGTTAAGTCTCAGTTGATGCTATAT 58.058 34.615 0.00 0.00 0.00 0.86
2989 4359 8.414003 TCGTTAAGTCTCAGTTGATGCTATATT 58.586 33.333 0.00 0.00 0.00 1.28
2990 4360 8.695284 CGTTAAGTCTCAGTTGATGCTATATTC 58.305 37.037 0.00 0.00 0.00 1.75
2991 4361 9.534565 GTTAAGTCTCAGTTGATGCTATATTCA 57.465 33.333 0.00 0.00 0.00 2.57
2995 4365 9.926158 AGTCTCAGTTGATGCTATATTCATAAG 57.074 33.333 0.00 0.00 0.00 1.73
2996 4366 9.920133 GTCTCAGTTGATGCTATATTCATAAGA 57.080 33.333 0.00 0.00 0.00 2.10
3025 4395 8.897872 ACATTGAAATCTGAGCAAAAATTTCT 57.102 26.923 12.70 0.00 38.39 2.52
3026 4396 9.333724 ACATTGAAATCTGAGCAAAAATTTCTT 57.666 25.926 12.70 0.00 38.39 2.52
3027 4397 9.807386 CATTGAAATCTGAGCAAAAATTTCTTC 57.193 29.630 12.70 0.00 38.39 2.87
3028 4398 7.627585 TGAAATCTGAGCAAAAATTTCTTCG 57.372 32.000 12.70 0.00 38.39 3.79
3029 4399 7.202526 TGAAATCTGAGCAAAAATTTCTTCGT 58.797 30.769 12.70 0.00 38.39 3.85
3030 4400 7.706179 TGAAATCTGAGCAAAAATTTCTTCGTT 59.294 29.630 12.70 0.00 38.39 3.85
3031 4401 8.424274 AAATCTGAGCAAAAATTTCTTCGTTT 57.576 26.923 0.00 0.00 0.00 3.60
3032 4402 8.424274 AATCTGAGCAAAAATTTCTTCGTTTT 57.576 26.923 0.00 0.00 0.00 2.43
3033 4403 7.449934 TCTGAGCAAAAATTTCTTCGTTTTC 57.550 32.000 0.00 0.00 0.00 2.29
3034 4404 7.257722 TCTGAGCAAAAATTTCTTCGTTTTCT 58.742 30.769 0.00 0.00 0.00 2.52
3035 4405 7.432252 TCTGAGCAAAAATTTCTTCGTTTTCTC 59.568 33.333 0.00 0.00 0.00 2.87
3036 4406 7.257722 TGAGCAAAAATTTCTTCGTTTTCTCT 58.742 30.769 0.00 0.00 0.00 3.10
3037 4407 7.432252 TGAGCAAAAATTTCTTCGTTTTCTCTC 59.568 33.333 0.00 0.00 32.41 3.20
3038 4408 7.484140 AGCAAAAATTTCTTCGTTTTCTCTCT 58.516 30.769 0.00 0.00 0.00 3.10
3039 4409 7.645735 AGCAAAAATTTCTTCGTTTTCTCTCTC 59.354 33.333 0.00 0.00 0.00 3.20
3040 4410 7.645735 GCAAAAATTTCTTCGTTTTCTCTCTCT 59.354 33.333 0.00 0.00 0.00 3.10
3041 4411 9.508567 CAAAAATTTCTTCGTTTTCTCTCTCTT 57.491 29.630 0.00 0.00 0.00 2.85
3042 4412 9.508567 AAAAATTTCTTCGTTTTCTCTCTCTTG 57.491 29.630 0.00 0.00 0.00 3.02
3043 4413 5.659048 TTTCTTCGTTTTCTCTCTCTTGC 57.341 39.130 0.00 0.00 0.00 4.01
3044 4414 4.322080 TCTTCGTTTTCTCTCTCTTGCA 57.678 40.909 0.00 0.00 0.00 4.08
3045 4415 4.887748 TCTTCGTTTTCTCTCTCTTGCAT 58.112 39.130 0.00 0.00 0.00 3.96
3046 4416 4.687948 TCTTCGTTTTCTCTCTCTTGCATG 59.312 41.667 0.00 0.00 0.00 4.06
3047 4417 3.995199 TCGTTTTCTCTCTCTTGCATGT 58.005 40.909 0.00 0.00 0.00 3.21
3048 4418 4.380531 TCGTTTTCTCTCTCTTGCATGTT 58.619 39.130 0.00 0.00 0.00 2.71
3049 4419 5.538118 TCGTTTTCTCTCTCTTGCATGTTA 58.462 37.500 0.00 0.00 0.00 2.41
3050 4420 6.166279 TCGTTTTCTCTCTCTTGCATGTTAT 58.834 36.000 0.00 0.00 0.00 1.89
3051 4421 6.091305 TCGTTTTCTCTCTCTTGCATGTTATG 59.909 38.462 0.00 0.00 0.00 1.90
3052 4422 6.128445 CGTTTTCTCTCTCTTGCATGTTATGT 60.128 38.462 0.00 0.00 0.00 2.29
3053 4423 6.974932 TTTCTCTCTCTTGCATGTTATGTC 57.025 37.500 0.00 0.00 0.00 3.06
3054 4424 5.665916 TCTCTCTCTTGCATGTTATGTCA 57.334 39.130 0.00 0.00 0.00 3.58
3055 4425 5.414360 TCTCTCTCTTGCATGTTATGTCAC 58.586 41.667 0.00 0.00 0.00 3.67
3056 4426 5.186603 TCTCTCTCTTGCATGTTATGTCACT 59.813 40.000 0.00 0.00 0.00 3.41
3057 4427 5.798132 TCTCTCTTGCATGTTATGTCACTT 58.202 37.500 0.00 0.00 0.00 3.16
3058 4428 5.640783 TCTCTCTTGCATGTTATGTCACTTG 59.359 40.000 0.00 0.00 0.00 3.16
3059 4429 5.550290 TCTCTTGCATGTTATGTCACTTGA 58.450 37.500 0.00 0.00 0.00 3.02
3060 4430 5.409520 TCTCTTGCATGTTATGTCACTTGAC 59.590 40.000 2.19 2.19 44.97 3.18
3061 4431 5.308014 TCTTGCATGTTATGTCACTTGACT 58.692 37.500 10.63 0.00 44.99 3.41
3062 4432 5.179929 TCTTGCATGTTATGTCACTTGACTG 59.820 40.000 10.63 1.04 44.99 3.51
3063 4433 4.640364 TGCATGTTATGTCACTTGACTGA 58.360 39.130 10.63 0.00 44.99 3.41
3064 4434 4.692155 TGCATGTTATGTCACTTGACTGAG 59.308 41.667 10.63 0.00 44.99 3.35
3065 4435 4.931601 GCATGTTATGTCACTTGACTGAGA 59.068 41.667 10.63 0.00 44.99 3.27
3066 4436 5.163913 GCATGTTATGTCACTTGACTGAGAC 60.164 44.000 10.63 5.26 44.99 3.36
3067 4437 5.791336 TGTTATGTCACTTGACTGAGACT 57.209 39.130 10.63 0.00 44.99 3.24
3068 4438 6.161855 TGTTATGTCACTTGACTGAGACTT 57.838 37.500 10.63 0.00 44.99 3.01
3069 4439 5.985530 TGTTATGTCACTTGACTGAGACTTG 59.014 40.000 10.63 0.00 44.99 3.16
3070 4440 3.459232 TGTCACTTGACTGAGACTTGG 57.541 47.619 10.63 0.00 44.99 3.61
3071 4441 2.766263 TGTCACTTGACTGAGACTTGGT 59.234 45.455 10.63 0.00 44.99 3.67
3072 4442 3.197766 TGTCACTTGACTGAGACTTGGTT 59.802 43.478 10.63 0.00 44.99 3.67
3073 4443 4.404394 TGTCACTTGACTGAGACTTGGTTA 59.596 41.667 10.63 0.00 44.99 2.85
3074 4444 5.105106 TGTCACTTGACTGAGACTTGGTTAA 60.105 40.000 10.63 0.00 44.99 2.01
3075 4445 5.815740 GTCACTTGACTGAGACTTGGTTAAA 59.184 40.000 1.92 0.00 41.65 1.52
3076 4446 6.483640 GTCACTTGACTGAGACTTGGTTAAAT 59.516 38.462 1.92 0.00 41.65 1.40
3077 4447 6.706270 TCACTTGACTGAGACTTGGTTAAATC 59.294 38.462 0.00 0.00 0.00 2.17
3078 4448 6.708054 CACTTGACTGAGACTTGGTTAAATCT 59.292 38.462 0.00 0.00 0.00 2.40
3079 4449 6.931840 ACTTGACTGAGACTTGGTTAAATCTC 59.068 38.462 0.00 0.00 38.46 2.75
3080 4450 6.419484 TGACTGAGACTTGGTTAAATCTCA 57.581 37.500 3.03 3.03 44.05 3.27
3084 4454 5.470368 TGAGACTTGGTTAAATCTCAGTCG 58.530 41.667 0.00 0.00 41.99 4.18
3085 4455 5.243060 TGAGACTTGGTTAAATCTCAGTCGA 59.757 40.000 0.00 0.00 41.99 4.20
3086 4456 5.471257 AGACTTGGTTAAATCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
3087 4457 5.244178 AGACTTGGTTAAATCTCAGTCGACT 59.756 40.000 13.58 13.58 0.00 4.18
3088 4458 6.433404 AGACTTGGTTAAATCTCAGTCGACTA 59.567 38.462 19.57 2.81 0.00 2.59
3089 4459 6.989659 ACTTGGTTAAATCTCAGTCGACTAA 58.010 36.000 19.57 1.94 0.00 2.24
3090 4460 7.091443 ACTTGGTTAAATCTCAGTCGACTAAG 58.909 38.462 19.57 14.47 32.57 2.18
3091 4461 6.829229 TGGTTAAATCTCAGTCGACTAAGA 57.171 37.500 20.63 20.63 0.00 2.10
3092 4462 7.406031 TGGTTAAATCTCAGTCGACTAAGAT 57.594 36.000 23.21 23.21 32.38 2.40
3093 4463 7.481642 TGGTTAAATCTCAGTCGACTAAGATC 58.518 38.462 27.65 16.59 29.77 2.75
3094 4464 7.339721 TGGTTAAATCTCAGTCGACTAAGATCT 59.660 37.037 27.65 18.95 29.77 2.75
3095 4465 8.838365 GGTTAAATCTCAGTCGACTAAGATCTA 58.162 37.037 27.65 17.94 29.77 1.98
3096 4466 9.872757 GTTAAATCTCAGTCGACTAAGATCTAG 57.127 37.037 27.65 9.96 29.77 2.43
3097 4467 6.554334 AATCTCAGTCGACTAAGATCTAGC 57.446 41.667 27.65 0.00 29.77 3.42
3098 4468 4.382291 TCTCAGTCGACTAAGATCTAGCC 58.618 47.826 19.57 0.00 0.00 3.93
3099 4469 4.130857 CTCAGTCGACTAAGATCTAGCCA 58.869 47.826 19.57 0.00 0.00 4.75
3100 4470 3.878103 TCAGTCGACTAAGATCTAGCCAC 59.122 47.826 19.57 0.00 0.00 5.01
3101 4471 3.628032 CAGTCGACTAAGATCTAGCCACA 59.372 47.826 19.57 0.00 0.00 4.17
3102 4472 3.628487 AGTCGACTAAGATCTAGCCACAC 59.372 47.826 18.46 0.00 0.00 3.82
3103 4473 2.950309 TCGACTAAGATCTAGCCACACC 59.050 50.000 0.00 0.00 0.00 4.16
3104 4474 2.034812 CGACTAAGATCTAGCCACACCC 59.965 54.545 0.00 0.00 0.00 4.61
3105 4475 3.031736 GACTAAGATCTAGCCACACCCA 58.968 50.000 0.00 0.00 0.00 4.51
3106 4476 3.643792 GACTAAGATCTAGCCACACCCAT 59.356 47.826 0.00 0.00 0.00 4.00
3107 4477 4.040755 ACTAAGATCTAGCCACACCCATT 58.959 43.478 0.00 0.00 0.00 3.16
3108 4478 5.216622 ACTAAGATCTAGCCACACCCATTA 58.783 41.667 0.00 0.00 0.00 1.90
3109 4479 5.846714 ACTAAGATCTAGCCACACCCATTAT 59.153 40.000 0.00 0.00 0.00 1.28
3110 4480 4.899352 AGATCTAGCCACACCCATTATC 57.101 45.455 0.00 0.00 0.00 1.75
3111 4481 4.497516 AGATCTAGCCACACCCATTATCT 58.502 43.478 0.00 0.00 0.00 1.98
3112 4482 4.910304 AGATCTAGCCACACCCATTATCTT 59.090 41.667 0.00 0.00 0.00 2.40
3113 4483 5.370880 AGATCTAGCCACACCCATTATCTTT 59.629 40.000 0.00 0.00 0.00 2.52
3114 4484 5.036117 TCTAGCCACACCCATTATCTTTC 57.964 43.478 0.00 0.00 0.00 2.62
3115 4485 4.721776 TCTAGCCACACCCATTATCTTTCT 59.278 41.667 0.00 0.00 0.00 2.52
3116 4486 3.891049 AGCCACACCCATTATCTTTCTC 58.109 45.455 0.00 0.00 0.00 2.87
3117 4487 2.614057 GCCACACCCATTATCTTTCTCG 59.386 50.000 0.00 0.00 0.00 4.04
3118 4488 2.614057 CCACACCCATTATCTTTCTCGC 59.386 50.000 0.00 0.00 0.00 5.03
3119 4489 2.614057 CACACCCATTATCTTTCTCGCC 59.386 50.000 0.00 0.00 0.00 5.54
3120 4490 2.222027 CACCCATTATCTTTCTCGCCC 58.778 52.381 0.00 0.00 0.00 6.13
3121 4491 1.143073 ACCCATTATCTTTCTCGCCCC 59.857 52.381 0.00 0.00 0.00 5.80
3122 4492 1.545651 CCCATTATCTTTCTCGCCCCC 60.546 57.143 0.00 0.00 0.00 5.40
3123 4493 1.421646 CCATTATCTTTCTCGCCCCCT 59.578 52.381 0.00 0.00 0.00 4.79
3124 4494 2.637872 CCATTATCTTTCTCGCCCCCTA 59.362 50.000 0.00 0.00 0.00 3.53
3125 4495 3.072476 CCATTATCTTTCTCGCCCCCTAA 59.928 47.826 0.00 0.00 0.00 2.69
3126 4496 4.263506 CCATTATCTTTCTCGCCCCCTAAT 60.264 45.833 0.00 0.00 0.00 1.73
3127 4497 2.938956 ATCTTTCTCGCCCCCTAATG 57.061 50.000 0.00 0.00 0.00 1.90
3128 4498 1.874129 TCTTTCTCGCCCCCTAATGA 58.126 50.000 0.00 0.00 0.00 2.57
3129 4499 1.485066 TCTTTCTCGCCCCCTAATGAC 59.515 52.381 0.00 0.00 0.00 3.06
3130 4500 1.486726 CTTTCTCGCCCCCTAATGACT 59.513 52.381 0.00 0.00 0.00 3.41
3131 4501 2.464796 TTCTCGCCCCCTAATGACTA 57.535 50.000 0.00 0.00 0.00 2.59
3132 4502 2.464796 TCTCGCCCCCTAATGACTAA 57.535 50.000 0.00 0.00 0.00 2.24
3133 4503 2.754465 TCTCGCCCCCTAATGACTAAA 58.246 47.619 0.00 0.00 0.00 1.85
3134 4504 3.314693 TCTCGCCCCCTAATGACTAAAT 58.685 45.455 0.00 0.00 0.00 1.40
3135 4505 3.323979 TCTCGCCCCCTAATGACTAAATC 59.676 47.826 0.00 0.00 0.00 2.17
3136 4506 2.370849 TCGCCCCCTAATGACTAAATCC 59.629 50.000 0.00 0.00 0.00 3.01
3137 4507 2.372172 CGCCCCCTAATGACTAAATCCT 59.628 50.000 0.00 0.00 0.00 3.24
3138 4508 3.756117 GCCCCCTAATGACTAAATCCTG 58.244 50.000 0.00 0.00 0.00 3.86
3139 4509 3.498661 GCCCCCTAATGACTAAATCCTGG 60.499 52.174 0.00 0.00 0.00 4.45
3140 4510 3.498661 CCCCCTAATGACTAAATCCTGGC 60.499 52.174 0.00 0.00 0.00 4.85
3141 4511 3.395941 CCCCTAATGACTAAATCCTGGCT 59.604 47.826 0.00 0.00 0.00 4.75
3142 4512 4.505742 CCCCTAATGACTAAATCCTGGCTC 60.506 50.000 0.00 0.00 0.00 4.70
3143 4513 4.505742 CCCTAATGACTAAATCCTGGCTCC 60.506 50.000 0.00 0.00 0.00 4.70
3144 4514 4.103153 CCTAATGACTAAATCCTGGCTCCA 59.897 45.833 0.00 0.00 0.00 3.86
3145 4515 4.803329 AATGACTAAATCCTGGCTCCAT 57.197 40.909 0.00 0.00 0.00 3.41
3146 4516 4.803329 ATGACTAAATCCTGGCTCCATT 57.197 40.909 0.00 0.00 0.00 3.16
3147 4517 4.156455 TGACTAAATCCTGGCTCCATTC 57.844 45.455 0.00 0.00 0.00 2.67
3148 4518 3.117888 TGACTAAATCCTGGCTCCATTCC 60.118 47.826 0.00 0.00 0.00 3.01
3149 4519 3.126453 ACTAAATCCTGGCTCCATTCCT 58.874 45.455 0.00 0.00 0.00 3.36
3150 4520 2.449137 AAATCCTGGCTCCATTCCTG 57.551 50.000 0.00 0.00 0.00 3.86
3151 4521 0.106318 AATCCTGGCTCCATTCCTGC 60.106 55.000 0.00 0.00 0.00 4.85
3152 4522 2.004408 ATCCTGGCTCCATTCCTGCC 62.004 60.000 0.00 0.00 46.26 4.85
3153 4523 2.123982 CTGGCTCCATTCCTGCCC 60.124 66.667 0.00 0.00 45.56 5.36
3154 4524 4.113815 TGGCTCCATTCCTGCCCG 62.114 66.667 0.00 0.00 45.56 6.13
3155 4525 4.883354 GGCTCCATTCCTGCCCGG 62.883 72.222 0.00 0.00 40.71 5.73
3156 4526 4.883354 GCTCCATTCCTGCCCGGG 62.883 72.222 19.09 19.09 0.00 5.73
3157 4527 4.883354 CTCCATTCCTGCCCGGGC 62.883 72.222 39.40 39.40 42.35 6.13
3159 4529 4.447342 CCATTCCTGCCCGGGCTT 62.447 66.667 43.34 21.44 42.51 4.35
3160 4530 2.830370 CATTCCTGCCCGGGCTTC 60.830 66.667 43.34 18.63 42.51 3.86
3161 4531 3.017581 ATTCCTGCCCGGGCTTCT 61.018 61.111 43.34 22.00 42.51 2.85
3162 4532 3.049080 ATTCCTGCCCGGGCTTCTC 62.049 63.158 43.34 17.81 42.51 2.87
3165 4535 3.801997 CTGCCCGGGCTTCTCCAT 61.802 66.667 43.34 0.00 42.51 3.41
3166 4536 2.366301 TGCCCGGGCTTCTCCATA 60.366 61.111 43.34 20.74 42.51 2.74
3167 4537 2.388890 CTGCCCGGGCTTCTCCATAG 62.389 65.000 43.34 26.94 42.51 2.23
3168 4538 2.444256 GCCCGGGCTTCTCCATAGT 61.444 63.158 38.76 0.00 38.26 2.12
3169 4539 1.749033 CCCGGGCTTCTCCATAGTC 59.251 63.158 8.08 0.00 36.21 2.59
3170 4540 1.364171 CCGGGCTTCTCCATAGTCG 59.636 63.158 0.00 0.00 36.21 4.18
3171 4541 1.300233 CGGGCTTCTCCATAGTCGC 60.300 63.158 0.00 0.00 36.21 5.19
3172 4542 1.069935 GGGCTTCTCCATAGTCGCC 59.930 63.158 0.00 0.00 37.96 5.54
3173 4543 1.069935 GGCTTCTCCATAGTCGCCC 59.930 63.158 0.00 0.00 34.90 6.13
3174 4544 1.069935 GCTTCTCCATAGTCGCCCC 59.930 63.158 0.00 0.00 0.00 5.80
3175 4545 1.686325 GCTTCTCCATAGTCGCCCCA 61.686 60.000 0.00 0.00 0.00 4.96
3176 4546 0.390860 CTTCTCCATAGTCGCCCCAG 59.609 60.000 0.00 0.00 0.00 4.45
3177 4547 0.032515 TTCTCCATAGTCGCCCCAGA 60.033 55.000 0.00 0.00 0.00 3.86
3178 4548 0.188587 TCTCCATAGTCGCCCCAGAT 59.811 55.000 0.00 0.00 0.00 2.90
3179 4549 1.051812 CTCCATAGTCGCCCCAGATT 58.948 55.000 0.00 0.00 0.00 2.40
3180 4550 1.417890 CTCCATAGTCGCCCCAGATTT 59.582 52.381 0.00 0.00 0.00 2.17
3181 4551 1.140852 TCCATAGTCGCCCCAGATTTG 59.859 52.381 0.00 0.00 0.00 2.32
3182 4552 1.140852 CCATAGTCGCCCCAGATTTGA 59.859 52.381 0.00 0.00 0.00 2.69
3183 4553 2.421388 CCATAGTCGCCCCAGATTTGAA 60.421 50.000 0.00 0.00 0.00 2.69
3184 4554 3.480470 CATAGTCGCCCCAGATTTGAAT 58.520 45.455 0.00 0.00 0.00 2.57
3185 4555 2.514458 AGTCGCCCCAGATTTGAATT 57.486 45.000 0.00 0.00 0.00 2.17
3186 4556 2.094675 AGTCGCCCCAGATTTGAATTG 58.905 47.619 0.00 0.00 0.00 2.32
3187 4557 1.134946 GTCGCCCCAGATTTGAATTGG 59.865 52.381 0.00 0.00 0.00 3.16
3188 4558 1.005332 TCGCCCCAGATTTGAATTGGA 59.995 47.619 0.00 0.00 33.76 3.53
3189 4559 2.034124 CGCCCCAGATTTGAATTGGAT 58.966 47.619 0.00 0.00 33.76 3.41
3190 4560 3.117701 TCGCCCCAGATTTGAATTGGATA 60.118 43.478 0.00 0.00 33.76 2.59
3191 4561 3.828451 CGCCCCAGATTTGAATTGGATAT 59.172 43.478 0.00 0.00 33.76 1.63
3192 4562 4.321452 CGCCCCAGATTTGAATTGGATATG 60.321 45.833 0.00 0.00 33.76 1.78
3193 4563 4.834496 GCCCCAGATTTGAATTGGATATGA 59.166 41.667 0.00 0.00 33.76 2.15
3194 4564 5.047519 GCCCCAGATTTGAATTGGATATGAG 60.048 44.000 0.00 0.00 33.76 2.90
3195 4565 5.479375 CCCCAGATTTGAATTGGATATGAGG 59.521 44.000 0.00 0.00 33.76 3.86
3196 4566 6.073314 CCCAGATTTGAATTGGATATGAGGT 58.927 40.000 0.00 0.00 33.76 3.85
3197 4567 6.208204 CCCAGATTTGAATTGGATATGAGGTC 59.792 42.308 0.00 0.00 33.76 3.85
3198 4568 7.002879 CCAGATTTGAATTGGATATGAGGTCT 58.997 38.462 0.00 0.00 33.76 3.85
3199 4569 8.159447 CCAGATTTGAATTGGATATGAGGTCTA 58.841 37.037 0.00 0.00 33.76 2.59
3200 4570 9.736414 CAGATTTGAATTGGATATGAGGTCTAT 57.264 33.333 0.00 0.00 0.00 1.98
3201 4571 9.956640 AGATTTGAATTGGATATGAGGTCTATC 57.043 33.333 0.00 0.00 0.00 2.08
3202 4572 9.171877 GATTTGAATTGGATATGAGGTCTATCC 57.828 37.037 2.98 2.98 43.33 2.59
3208 4578 4.713814 TGGATATGAGGTCTATCCATCAGC 59.286 45.833 7.75 0.00 46.15 4.26
3209 4579 4.100808 GGATATGAGGTCTATCCATCAGCC 59.899 50.000 4.80 0.00 42.80 4.85
3210 4580 1.722034 TGAGGTCTATCCATCAGCCC 58.278 55.000 0.00 0.00 39.02 5.19
3211 4581 0.980423 GAGGTCTATCCATCAGCCCC 59.020 60.000 0.00 0.00 39.02 5.80
3212 4582 0.833834 AGGTCTATCCATCAGCCCCG 60.834 60.000 0.00 0.00 39.02 5.73
3213 4583 0.832135 GGTCTATCCATCAGCCCCGA 60.832 60.000 0.00 0.00 35.97 5.14
3214 4584 0.605589 GTCTATCCATCAGCCCCGAG 59.394 60.000 0.00 0.00 0.00 4.63
3215 4585 1.188219 TCTATCCATCAGCCCCGAGC 61.188 60.000 0.00 0.00 44.25 5.03
3225 4595 2.124278 CCCCGAGCTTTTAGGGCC 60.124 66.667 10.82 0.00 43.74 5.80
3226 4596 2.513897 CCCGAGCTTTTAGGGCCG 60.514 66.667 0.00 0.00 38.51 6.13
3227 4597 2.513897 CCGAGCTTTTAGGGCCGG 60.514 66.667 0.00 0.00 37.26 6.13
3228 4598 2.267961 CGAGCTTTTAGGGCCGGT 59.732 61.111 1.90 0.00 0.00 5.28
3229 4599 1.376812 CGAGCTTTTAGGGCCGGTT 60.377 57.895 1.90 0.00 0.00 4.44
3230 4600 0.958876 CGAGCTTTTAGGGCCGGTTT 60.959 55.000 1.90 0.00 0.00 3.27
3231 4601 1.676615 CGAGCTTTTAGGGCCGGTTTA 60.677 52.381 1.90 0.00 0.00 2.01
3232 4602 2.439409 GAGCTTTTAGGGCCGGTTTAA 58.561 47.619 1.90 0.00 0.00 1.52
3233 4603 2.422479 GAGCTTTTAGGGCCGGTTTAAG 59.578 50.000 1.90 0.24 0.00 1.85
3234 4604 1.475280 GCTTTTAGGGCCGGTTTAAGG 59.525 52.381 1.90 0.00 0.00 2.69
3240 4610 3.493440 GCCGGTTTAAGGCGTCCG 61.493 66.667 1.90 0.00 45.58 4.79
3241 4611 2.047939 CCGGTTTAAGGCGTCCGT 60.048 61.111 0.00 0.00 41.17 4.69
3242 4612 1.668793 CCGGTTTAAGGCGTCCGTT 60.669 57.895 0.00 0.00 41.17 4.44
3243 4613 1.229975 CCGGTTTAAGGCGTCCGTTT 61.230 55.000 0.00 0.00 41.17 3.60
3244 4614 0.110554 CGGTTTAAGGCGTCCGTTTG 60.111 55.000 0.00 0.00 38.45 2.93
3245 4615 1.228533 GGTTTAAGGCGTCCGTTTGA 58.771 50.000 0.00 0.00 0.00 2.69
3246 4616 1.603326 GGTTTAAGGCGTCCGTTTGAA 59.397 47.619 0.00 0.00 0.00 2.69
3247 4617 2.227149 GGTTTAAGGCGTCCGTTTGAAT 59.773 45.455 0.00 0.00 0.00 2.57
3248 4618 3.485633 GTTTAAGGCGTCCGTTTGAATC 58.514 45.455 0.00 0.00 0.00 2.52
3249 4619 1.352114 TAAGGCGTCCGTTTGAATCG 58.648 50.000 0.00 0.00 0.00 3.34
3250 4620 1.908066 AAGGCGTCCGTTTGAATCGC 61.908 55.000 0.00 0.00 44.95 4.58
3251 4621 2.097728 GCGTCCGTTTGAATCGCC 59.902 61.111 0.00 0.00 40.83 5.54
3252 4622 2.388232 GCGTCCGTTTGAATCGCCT 61.388 57.895 0.00 0.00 40.83 5.52
3253 4623 1.908066 GCGTCCGTTTGAATCGCCTT 61.908 55.000 0.00 0.00 40.83 4.35
3254 4624 0.094730 CGTCCGTTTGAATCGCCTTC 59.905 55.000 0.00 0.00 0.00 3.46
3255 4625 1.439679 GTCCGTTTGAATCGCCTTCT 58.560 50.000 0.00 0.00 34.75 2.85
3256 4626 1.804748 GTCCGTTTGAATCGCCTTCTT 59.195 47.619 0.00 0.00 34.75 2.52
3257 4627 2.225727 GTCCGTTTGAATCGCCTTCTTT 59.774 45.455 0.00 0.00 34.75 2.52
3258 4628 2.482721 TCCGTTTGAATCGCCTTCTTTC 59.517 45.455 0.00 0.00 34.75 2.62
3259 4629 2.484264 CCGTTTGAATCGCCTTCTTTCT 59.516 45.455 0.00 0.00 34.75 2.52
3260 4630 3.682858 CCGTTTGAATCGCCTTCTTTCTA 59.317 43.478 0.00 0.00 34.75 2.10
3261 4631 4.332819 CCGTTTGAATCGCCTTCTTTCTAT 59.667 41.667 0.00 0.00 34.75 1.98
3262 4632 5.258622 CGTTTGAATCGCCTTCTTTCTATG 58.741 41.667 0.34 0.00 34.75 2.23
3263 4633 5.573146 GTTTGAATCGCCTTCTTTCTATGG 58.427 41.667 0.34 0.00 34.75 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.072468 TACTGGTTCCTCCCGCGG 61.072 66.667 21.04 21.04 34.77 6.46
3 4 2.183555 GTACTGGTTCCTCCCGCG 59.816 66.667 0.00 0.00 34.77 6.46
4 5 2.288025 TGGTACTGGTTCCTCCCGC 61.288 63.158 0.00 0.00 34.77 6.13
5 6 1.595357 GTGGTACTGGTTCCTCCCG 59.405 63.158 0.00 0.00 34.77 5.14
6 7 0.901580 TCGTGGTACTGGTTCCTCCC 60.902 60.000 0.00 0.00 34.77 4.30
7 8 0.245813 GTCGTGGTACTGGTTCCTCC 59.754 60.000 0.00 0.00 0.00 4.30
8 9 0.245813 GGTCGTGGTACTGGTTCCTC 59.754 60.000 0.00 0.00 0.00 3.71
9 10 0.470456 TGGTCGTGGTACTGGTTCCT 60.470 55.000 0.00 0.00 0.00 3.36
10 11 0.611714 ATGGTCGTGGTACTGGTTCC 59.388 55.000 0.00 0.00 0.00 3.62
11 12 1.274167 TGATGGTCGTGGTACTGGTTC 59.726 52.381 0.00 0.00 0.00 3.62
12 13 1.275291 CTGATGGTCGTGGTACTGGTT 59.725 52.381 0.00 0.00 0.00 3.67
13 14 0.895530 CTGATGGTCGTGGTACTGGT 59.104 55.000 0.00 0.00 0.00 4.00
14 15 0.460284 GCTGATGGTCGTGGTACTGG 60.460 60.000 0.00 0.00 0.00 4.00
15 16 0.460284 GGCTGATGGTCGTGGTACTG 60.460 60.000 0.00 0.00 0.00 2.74
16 17 0.614979 AGGCTGATGGTCGTGGTACT 60.615 55.000 0.00 0.00 0.00 2.73
17 18 0.460284 CAGGCTGATGGTCGTGGTAC 60.460 60.000 9.42 0.00 0.00 3.34
18 19 0.902984 ACAGGCTGATGGTCGTGGTA 60.903 55.000 23.66 0.00 0.00 3.25
37 38 1.300080 GGGACGACGACGGTTTCAA 60.300 57.895 12.58 0.00 44.46 2.69
160 161 1.296715 GACGATCACACCTTGCCCT 59.703 57.895 0.00 0.00 0.00 5.19
349 353 2.037620 GCGATCCTCTGGATGCACCT 62.038 60.000 3.57 0.00 43.27 4.00
431 435 2.171840 TGTCTTCTTCTTCCTCCTCCG 58.828 52.381 0.00 0.00 0.00 4.63
437 441 4.263243 CCACCTGAATGTCTTCTTCTTCCT 60.263 45.833 0.00 0.00 32.29 3.36
447 451 0.606401 CAACCGCCACCTGAATGTCT 60.606 55.000 0.00 0.00 0.00 3.41
450 454 1.670811 GATACAACCGCCACCTGAATG 59.329 52.381 0.00 0.00 0.00 2.67
451 455 1.559682 AGATACAACCGCCACCTGAAT 59.440 47.619 0.00 0.00 0.00 2.57
452 456 0.981183 AGATACAACCGCCACCTGAA 59.019 50.000 0.00 0.00 0.00 3.02
454 458 1.472728 GGTAGATACAACCGCCACCTG 60.473 57.143 0.00 0.00 0.00 4.00
455 459 0.828677 GGTAGATACAACCGCCACCT 59.171 55.000 0.00 0.00 0.00 4.00
456 460 0.179065 GGGTAGATACAACCGCCACC 60.179 60.000 0.00 0.00 37.93 4.61
457 461 0.828677 AGGGTAGATACAACCGCCAC 59.171 55.000 0.00 0.00 37.93 5.01
458 462 0.828022 CAGGGTAGATACAACCGCCA 59.172 55.000 0.00 0.00 37.93 5.69
463 467 8.561738 TCAAATTTCTTCAGGGTAGATACAAC 57.438 34.615 0.00 0.00 0.00 3.32
465 469 7.336931 GCTTCAAATTTCTTCAGGGTAGATACA 59.663 37.037 0.00 0.00 0.00 2.29
468 472 6.248433 TGCTTCAAATTTCTTCAGGGTAGAT 58.752 36.000 0.00 0.00 0.00 1.98
469 473 5.630121 TGCTTCAAATTTCTTCAGGGTAGA 58.370 37.500 0.00 0.00 0.00 2.59
470 474 5.707298 TCTGCTTCAAATTTCTTCAGGGTAG 59.293 40.000 0.00 0.00 0.00 3.18
472 476 4.473444 TCTGCTTCAAATTTCTTCAGGGT 58.527 39.130 0.00 0.00 0.00 4.34
473 477 4.617762 GCTCTGCTTCAAATTTCTTCAGGG 60.618 45.833 0.00 0.00 0.00 4.45
483 487 0.526662 GCTGCTGCTCTGCTTCAAAT 59.473 50.000 8.53 0.00 36.79 2.32
484 488 0.820482 TGCTGCTGCTCTGCTTCAAA 60.820 50.000 17.00 0.00 39.95 2.69
485 489 1.228033 TGCTGCTGCTCTGCTTCAA 60.228 52.632 17.00 0.00 39.95 2.69
489 496 4.331067 TGCTGCTGCTGCTCTGCT 62.331 61.111 27.67 0.00 39.95 4.24
503 513 1.963338 GCTTCTGAACCACGCTGCT 60.963 57.895 0.00 0.00 0.00 4.24
504 514 1.963338 AGCTTCTGAACCACGCTGC 60.963 57.895 1.60 0.00 0.00 5.25
507 517 2.180131 CTGCAGCTTCTGAACCACGC 62.180 60.000 0.00 0.00 32.44 5.34
508 518 1.864862 CTGCAGCTTCTGAACCACG 59.135 57.895 0.00 0.00 32.44 4.94
531 541 1.025113 CAGACACTGCAGCCTCCATG 61.025 60.000 15.27 5.86 0.00 3.66
532 542 1.196766 TCAGACACTGCAGCCTCCAT 61.197 55.000 15.27 0.00 0.00 3.41
533 543 1.410050 TTCAGACACTGCAGCCTCCA 61.410 55.000 15.27 0.00 0.00 3.86
534 544 0.673022 CTTCAGACACTGCAGCCTCC 60.673 60.000 15.27 0.37 0.00 4.30
537 547 0.871057 GTTCTTCAGACACTGCAGCC 59.129 55.000 15.27 3.20 0.00 4.85
538 548 1.586422 TGTTCTTCAGACACTGCAGC 58.414 50.000 15.27 0.00 0.00 5.25
539 549 3.186001 GTCATGTTCTTCAGACACTGCAG 59.814 47.826 13.48 13.48 0.00 4.41
540 550 3.133691 GTCATGTTCTTCAGACACTGCA 58.866 45.455 0.00 0.00 0.00 4.41
541 551 2.156504 CGTCATGTTCTTCAGACACTGC 59.843 50.000 0.00 0.00 0.00 4.40
543 553 3.858877 GCTCGTCATGTTCTTCAGACACT 60.859 47.826 0.00 0.00 0.00 3.55
545 555 2.035832 TGCTCGTCATGTTCTTCAGACA 59.964 45.455 0.00 0.00 0.00 3.41
546 556 2.677199 TGCTCGTCATGTTCTTCAGAC 58.323 47.619 0.00 0.00 0.00 3.51
547 557 3.256558 CATGCTCGTCATGTTCTTCAGA 58.743 45.455 10.71 0.00 45.79 3.27
548 558 3.653256 CATGCTCGTCATGTTCTTCAG 57.347 47.619 10.71 0.00 45.79 3.02
560 570 1.291877 GCTCGTTTGGTCATGCTCGT 61.292 55.000 0.00 0.00 0.00 4.18
564 574 2.480555 CCGCTCGTTTGGTCATGC 59.519 61.111 0.00 0.00 0.00 4.06
580 590 4.160635 CGATTTGTCCGGCGTGCC 62.161 66.667 6.01 0.00 0.00 5.01
581 591 4.811761 GCGATTTGTCCGGCGTGC 62.812 66.667 6.01 0.00 0.00 5.34
642 655 3.117171 GCACCGAGAGCAGCACTG 61.117 66.667 0.00 0.00 0.00 3.66
643 656 4.385405 GGCACCGAGAGCAGCACT 62.385 66.667 0.00 0.00 0.00 4.40
813 826 1.720694 CTCTCCTCTCCTTCGCGACC 61.721 65.000 9.15 0.00 0.00 4.79
824 837 1.306568 GTTCCCCAGCCTCTCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
873 886 3.069980 GATCTGCCTCGCCGTGTCT 62.070 63.158 0.00 0.00 0.00 3.41
1259 1272 1.756950 ACCATCTTCTCCGCGCCTA 60.757 57.895 0.00 0.00 0.00 3.93
1414 1433 0.391130 CCGGCGAGGAAATTCTGACA 60.391 55.000 9.30 0.00 45.00 3.58
1431 1450 3.905678 CTAGGAGGCGCCAGTCCG 61.906 72.222 31.54 12.03 40.02 4.79
1433 1452 4.228567 GGCTAGGAGGCGCCAGTC 62.229 72.222 31.54 18.78 45.59 3.51
1524 1543 6.512297 TGGTAAATTTCTTCAGACTTTTGCC 58.488 36.000 0.00 9.26 34.48 4.52
1552 1579 6.322969 AGAGATCATATGGAATGCAGCAAAAA 59.677 34.615 0.00 0.00 0.00 1.94
1609 1636 1.656095 CTCGGACTCGATTCTGCAAAC 59.344 52.381 6.72 0.00 45.04 2.93
1618 1645 0.748729 GACTCCACCTCGGACTCGAT 60.749 60.000 0.00 0.00 45.04 3.59
1624 1651 2.037367 CTGGGACTCCACCTCGGA 59.963 66.667 0.00 0.00 43.61 4.55
1821 1848 1.393883 CGAAGACGTCGTCAGAGATGA 59.606 52.381 27.07 0.00 45.09 2.92
2325 3689 0.608640 CAGCCCACTTACGACCTCTT 59.391 55.000 0.00 0.00 0.00 2.85
2364 3728 0.610232 AGGACATTGTTGGGCTCTGC 60.610 55.000 0.00 0.00 0.00 4.26
2406 3770 3.777465 ACATCATGATTTGCTCACTGC 57.223 42.857 5.16 0.00 36.48 4.40
2486 3856 5.750352 AATAAAAACGGAGGGAGTACTCA 57.250 39.130 23.91 0.00 39.27 3.41
2489 3859 7.277319 CAGAGTAAATAAAAACGGAGGGAGTAC 59.723 40.741 0.00 0.00 0.00 2.73
2490 3860 7.325694 CAGAGTAAATAAAAACGGAGGGAGTA 58.674 38.462 0.00 0.00 0.00 2.59
2491 3861 6.171213 CAGAGTAAATAAAAACGGAGGGAGT 58.829 40.000 0.00 0.00 0.00 3.85
2492 3862 5.064834 GCAGAGTAAATAAAAACGGAGGGAG 59.935 44.000 0.00 0.00 0.00 4.30
2493 3863 4.939439 GCAGAGTAAATAAAAACGGAGGGA 59.061 41.667 0.00 0.00 0.00 4.20
2494 3864 4.698304 TGCAGAGTAAATAAAAACGGAGGG 59.302 41.667 0.00 0.00 0.00 4.30
2495 3865 5.873179 TGCAGAGTAAATAAAAACGGAGG 57.127 39.130 0.00 0.00 0.00 4.30
2509 3879 9.574516 TCAGTCAACTCTAATATATGCAGAGTA 57.425 33.333 21.82 11.02 46.37 2.59
2511 3881 9.409312 CTTCAGTCAACTCTAATATATGCAGAG 57.591 37.037 17.31 17.31 41.32 3.35
2512 3882 8.918116 ACTTCAGTCAACTCTAATATATGCAGA 58.082 33.333 0.00 0.00 0.00 4.26
2513 3883 9.190858 GACTTCAGTCAACTCTAATATATGCAG 57.809 37.037 1.86 0.00 44.18 4.41
2549 3919 9.620259 TGTTTTCTATAAATTTGGGCAAACTTT 57.380 25.926 0.00 0.00 32.51 2.66
2550 3920 9.620259 TTGTTTTCTATAAATTTGGGCAAACTT 57.380 25.926 0.00 0.00 32.51 2.66
2551 3921 9.791801 ATTGTTTTCTATAAATTTGGGCAAACT 57.208 25.926 0.00 0.00 32.51 2.66
2670 4040 9.528018 CCAAGCTTTGATAAAGTTTCTAAACAA 57.472 29.630 0.00 0.00 39.48 2.83
2671 4041 8.141268 CCCAAGCTTTGATAAAGTTTCTAAACA 58.859 33.333 0.00 0.00 39.48 2.83
2672 4042 7.116376 GCCCAAGCTTTGATAAAGTTTCTAAAC 59.884 37.037 0.00 0.00 39.48 2.01
2673 4043 7.151976 GCCCAAGCTTTGATAAAGTTTCTAAA 58.848 34.615 0.00 0.00 39.48 1.85
2674 4044 6.266558 TGCCCAAGCTTTGATAAAGTTTCTAA 59.733 34.615 0.00 0.00 39.48 2.10
2675 4045 5.772672 TGCCCAAGCTTTGATAAAGTTTCTA 59.227 36.000 0.00 0.00 39.48 2.10
2676 4046 4.588528 TGCCCAAGCTTTGATAAAGTTTCT 59.411 37.500 0.00 0.00 39.48 2.52
2677 4047 4.881920 TGCCCAAGCTTTGATAAAGTTTC 58.118 39.130 0.00 0.00 39.48 2.78
2678 4048 4.953940 TGCCCAAGCTTTGATAAAGTTT 57.046 36.364 0.00 0.00 41.72 2.66
2679 4049 6.603940 TTATGCCCAAGCTTTGATAAAGTT 57.396 33.333 0.00 0.00 40.64 2.66
2680 4050 6.603940 TTTATGCCCAAGCTTTGATAAAGT 57.396 33.333 0.00 0.00 40.64 2.66
2681 4051 9.598517 TTTATTTATGCCCAAGCTTTGATAAAG 57.401 29.630 0.00 0.00 40.80 1.85
2682 4052 9.950496 TTTTATTTATGCCCAAGCTTTGATAAA 57.050 25.926 0.00 1.78 40.80 1.40
2683 4053 9.950496 TTTTTATTTATGCCCAAGCTTTGATAA 57.050 25.926 0.00 0.00 40.80 1.75
2684 4054 9.598517 CTTTTTATTTATGCCCAAGCTTTGATA 57.401 29.630 0.00 0.00 40.80 2.15
2685 4055 8.102676 ACTTTTTATTTATGCCCAAGCTTTGAT 58.897 29.630 0.00 0.00 40.80 2.57
2686 4056 7.449247 ACTTTTTATTTATGCCCAAGCTTTGA 58.551 30.769 0.00 0.00 40.80 2.69
2687 4057 7.671495 ACTTTTTATTTATGCCCAAGCTTTG 57.329 32.000 0.00 0.00 40.80 2.77
2688 4058 8.567104 CAAACTTTTTATTTATGCCCAAGCTTT 58.433 29.630 0.00 0.00 40.80 3.51
2689 4059 7.308529 GCAAACTTTTTATTTATGCCCAAGCTT 60.309 33.333 0.00 0.00 40.80 3.74
2690 4060 6.149308 GCAAACTTTTTATTTATGCCCAAGCT 59.851 34.615 0.00 0.00 40.80 3.74
2691 4061 6.314018 GCAAACTTTTTATTTATGCCCAAGC 58.686 36.000 0.00 0.00 40.48 4.01
2692 4062 6.841119 GGCAAACTTTTTATTTATGCCCAAG 58.159 36.000 2.54 0.00 44.64 3.61
2693 4063 6.809630 GGCAAACTTTTTATTTATGCCCAA 57.190 33.333 2.54 0.00 44.64 4.12
2712 4082 7.525859 ATTTGATCAAAGTCAAGCATTAGGCAA 60.526 33.333 24.17 0.00 39.13 4.52
2713 4083 6.071221 ATTTGATCAAAGTCAAGCATTAGGCA 60.071 34.615 24.17 0.00 39.13 4.75
2714 4084 4.970662 TGATCAAAGTCAAGCATTAGGC 57.029 40.909 0.00 0.00 45.30 3.93
2715 4085 7.769220 AGATTTGATCAAAGTCAAGCATTAGG 58.231 34.615 24.17 0.00 39.13 2.69
2720 4090 8.390354 CGTATTAGATTTGATCAAAGTCAAGCA 58.610 33.333 24.17 6.79 39.13 3.91
2721 4091 7.374491 GCGTATTAGATTTGATCAAAGTCAAGC 59.626 37.037 24.17 16.93 39.13 4.01
2722 4092 7.580523 CGCGTATTAGATTTGATCAAAGTCAAG 59.419 37.037 24.17 12.23 39.13 3.02
2723 4093 7.398746 CGCGTATTAGATTTGATCAAAGTCAA 58.601 34.615 24.17 17.01 36.38 3.18
2724 4094 6.019075 CCGCGTATTAGATTTGATCAAAGTCA 60.019 38.462 24.17 10.02 33.32 3.41
2725 4095 6.200286 TCCGCGTATTAGATTTGATCAAAGTC 59.800 38.462 24.17 19.70 33.32 3.01
2726 4096 6.018994 GTCCGCGTATTAGATTTGATCAAAGT 60.019 38.462 24.17 16.61 33.32 2.66
2727 4097 6.201044 AGTCCGCGTATTAGATTTGATCAAAG 59.799 38.462 24.17 10.49 33.32 2.77
2728 4098 6.046593 AGTCCGCGTATTAGATTTGATCAAA 58.953 36.000 22.52 22.52 34.46 2.69
2729 4099 5.597806 AGTCCGCGTATTAGATTTGATCAA 58.402 37.500 3.38 3.38 0.00 2.57
2730 4100 5.196341 AGTCCGCGTATTAGATTTGATCA 57.804 39.130 4.92 0.00 0.00 2.92
2731 4101 7.633361 TTTAGTCCGCGTATTAGATTTGATC 57.367 36.000 4.92 0.00 0.00 2.92
2732 4102 9.701098 TTATTTAGTCCGCGTATTAGATTTGAT 57.299 29.630 4.92 0.00 0.00 2.57
2733 4103 9.531942 TTTATTTAGTCCGCGTATTAGATTTGA 57.468 29.630 4.92 0.00 0.00 2.69
2734 4104 9.793245 CTTTATTTAGTCCGCGTATTAGATTTG 57.207 33.333 4.92 0.00 0.00 2.32
2735 4105 8.493547 GCTTTATTTAGTCCGCGTATTAGATTT 58.506 33.333 4.92 0.00 0.00 2.17
2736 4106 7.871463 AGCTTTATTTAGTCCGCGTATTAGATT 59.129 33.333 4.92 0.00 0.00 2.40
2737 4107 7.376615 AGCTTTATTTAGTCCGCGTATTAGAT 58.623 34.615 4.92 0.00 0.00 1.98
2738 4108 6.742109 AGCTTTATTTAGTCCGCGTATTAGA 58.258 36.000 4.92 0.00 0.00 2.10
2739 4109 7.168637 TCAAGCTTTATTTAGTCCGCGTATTAG 59.831 37.037 4.92 0.00 0.00 1.73
2740 4110 6.979817 TCAAGCTTTATTTAGTCCGCGTATTA 59.020 34.615 4.92 0.00 0.00 0.98
2741 4111 5.813672 TCAAGCTTTATTTAGTCCGCGTATT 59.186 36.000 4.92 0.00 0.00 1.89
2742 4112 5.233689 GTCAAGCTTTATTTAGTCCGCGTAT 59.766 40.000 4.92 0.00 0.00 3.06
2743 4113 4.563976 GTCAAGCTTTATTTAGTCCGCGTA 59.436 41.667 4.92 0.00 0.00 4.42
2744 4114 3.370061 GTCAAGCTTTATTTAGTCCGCGT 59.630 43.478 4.92 0.00 0.00 6.01
2745 4115 3.617263 AGTCAAGCTTTATTTAGTCCGCG 59.383 43.478 0.00 0.00 0.00 6.46
2746 4116 5.547181 AAGTCAAGCTTTATTTAGTCCGC 57.453 39.130 0.00 0.00 32.57 5.54
2747 4117 7.015877 GTCAAAGTCAAGCTTTATTTAGTCCG 58.984 38.462 0.00 0.00 44.95 4.79
2748 4118 7.040686 TGGTCAAAGTCAAGCTTTATTTAGTCC 60.041 37.037 0.00 3.04 44.95 3.85
2749 4119 7.871853 TGGTCAAAGTCAAGCTTTATTTAGTC 58.128 34.615 0.00 0.00 44.95 2.59
2750 4120 7.817418 TGGTCAAAGTCAAGCTTTATTTAGT 57.183 32.000 0.00 0.00 44.95 2.24
2751 4121 9.185192 CTTTGGTCAAAGTCAAGCTTTATTTAG 57.815 33.333 13.58 0.00 44.95 1.85
2752 4122 8.908903 TCTTTGGTCAAAGTCAAGCTTTATTTA 58.091 29.630 19.13 0.00 44.95 1.40
2753 4123 7.781056 TCTTTGGTCAAAGTCAAGCTTTATTT 58.219 30.769 19.13 0.00 44.95 1.40
2754 4124 7.346751 TCTTTGGTCAAAGTCAAGCTTTATT 57.653 32.000 19.13 0.00 44.95 1.40
2755 4125 6.959639 TCTTTGGTCAAAGTCAAGCTTTAT 57.040 33.333 19.13 0.00 44.95 1.40
2756 4126 6.959639 ATCTTTGGTCAAAGTCAAGCTTTA 57.040 33.333 19.13 0.00 44.95 1.85
2758 4128 6.959639 TTATCTTTGGTCAAAGTCAAGCTT 57.040 33.333 19.13 0.00 45.88 3.74
2759 4129 7.148407 CGTATTATCTTTGGTCAAAGTCAAGCT 60.148 37.037 19.13 7.02 45.88 3.74
2760 4130 6.961554 CGTATTATCTTTGGTCAAAGTCAAGC 59.038 38.462 19.13 11.69 45.88 4.01
2761 4131 7.957484 CACGTATTATCTTTGGTCAAAGTCAAG 59.043 37.037 19.13 10.35 45.88 3.02
2762 4132 7.094975 CCACGTATTATCTTTGGTCAAAGTCAA 60.095 37.037 19.13 14.96 45.88 3.18
2763 4133 6.370442 CCACGTATTATCTTTGGTCAAAGTCA 59.630 38.462 19.13 8.71 45.88 3.41
2764 4134 6.592607 TCCACGTATTATCTTTGGTCAAAGTC 59.407 38.462 19.13 7.11 45.88 3.01
2765 4135 6.370718 GTCCACGTATTATCTTTGGTCAAAGT 59.629 38.462 19.13 11.42 45.88 2.66
2766 4136 6.594159 AGTCCACGTATTATCTTTGGTCAAAG 59.406 38.462 15.18 15.18 46.82 2.77
2767 4137 6.469410 AGTCCACGTATTATCTTTGGTCAAA 58.531 36.000 0.00 0.00 0.00 2.69
2768 4138 6.045072 AGTCCACGTATTATCTTTGGTCAA 57.955 37.500 0.00 0.00 0.00 3.18
2769 4139 5.670792 AGTCCACGTATTATCTTTGGTCA 57.329 39.130 0.00 0.00 0.00 4.02
2770 4140 8.658499 ATTTAGTCCACGTATTATCTTTGGTC 57.342 34.615 0.00 0.00 0.00 4.02
2783 4153 9.893305 CTTCTTTCATTTTTATTTAGTCCACGT 57.107 29.630 0.00 0.00 0.00 4.49
2784 4154 9.893305 ACTTCTTTCATTTTTATTTAGTCCACG 57.107 29.630 0.00 0.00 0.00 4.94
2797 4167 9.683069 CTGCTAACAATGTACTTCTTTCATTTT 57.317 29.630 0.00 0.00 30.74 1.82
2798 4168 7.809806 GCTGCTAACAATGTACTTCTTTCATTT 59.190 33.333 0.00 0.00 30.74 2.32
2799 4169 7.175641 AGCTGCTAACAATGTACTTCTTTCATT 59.824 33.333 0.00 0.00 32.93 2.57
2800 4170 6.656693 AGCTGCTAACAATGTACTTCTTTCAT 59.343 34.615 0.00 0.00 0.00 2.57
2801 4171 5.997746 AGCTGCTAACAATGTACTTCTTTCA 59.002 36.000 0.00 0.00 0.00 2.69
2802 4172 6.147821 TCAGCTGCTAACAATGTACTTCTTTC 59.852 38.462 9.47 0.00 0.00 2.62
2803 4173 5.997746 TCAGCTGCTAACAATGTACTTCTTT 59.002 36.000 9.47 0.00 0.00 2.52
2804 4174 5.551233 TCAGCTGCTAACAATGTACTTCTT 58.449 37.500 9.47 0.00 0.00 2.52
2805 4175 5.152623 TCAGCTGCTAACAATGTACTTCT 57.847 39.130 9.47 0.00 0.00 2.85
2806 4176 7.539712 TTATCAGCTGCTAACAATGTACTTC 57.460 36.000 9.47 0.00 0.00 3.01
2807 4177 8.511604 AATTATCAGCTGCTAACAATGTACTT 57.488 30.769 12.00 0.00 0.00 2.24
2808 4178 8.400947 CAAATTATCAGCTGCTAACAATGTACT 58.599 33.333 12.00 0.00 0.00 2.73
2933 4303 3.189702 GTCGACTGAGACTTAGCAAGACT 59.810 47.826 8.70 2.60 38.09 3.24
2934 4304 3.494232 GTCGACTGAGACTTAGCAAGAC 58.506 50.000 8.70 0.00 38.09 3.01
2935 4305 3.833545 GTCGACTGAGACTTAGCAAGA 57.166 47.619 8.70 0.00 38.09 3.02
2945 4315 3.661944 ACGAAGTCTTAGTCGACTGAGA 58.338 45.455 30.05 30.05 43.14 3.27
2946 4316 4.407496 AACGAAGTCTTAGTCGACTGAG 57.593 45.455 26.80 26.80 45.00 3.35
2947 4317 5.468072 ACTTAACGAAGTCTTAGTCGACTGA 59.532 40.000 28.12 19.13 45.00 3.41
2948 4318 5.687828 ACTTAACGAAGTCTTAGTCGACTG 58.312 41.667 28.12 12.46 45.00 3.51
2949 4319 5.938438 ACTTAACGAAGTCTTAGTCGACT 57.062 39.130 23.66 23.66 45.00 4.18
2961 4331 4.926238 AGCATCAACTGAGACTTAACGAAG 59.074 41.667 0.00 0.00 38.76 3.79
2962 4332 4.883083 AGCATCAACTGAGACTTAACGAA 58.117 39.130 0.00 0.00 0.00 3.85
2963 4333 4.521130 AGCATCAACTGAGACTTAACGA 57.479 40.909 0.00 0.00 0.00 3.85
2964 4334 8.581057 AATATAGCATCAACTGAGACTTAACG 57.419 34.615 0.00 0.00 0.00 3.18
2965 4335 9.534565 TGAATATAGCATCAACTGAGACTTAAC 57.465 33.333 0.00 0.00 0.00 2.01
2969 4339 9.926158 CTTATGAATATAGCATCAACTGAGACT 57.074 33.333 0.00 0.00 0.00 3.24
2970 4340 9.920133 TCTTATGAATATAGCATCAACTGAGAC 57.080 33.333 0.00 0.00 0.00 3.36
2999 4369 9.985730 AGAAATTTTTGCTCAGATTTCAATGTA 57.014 25.926 14.18 0.00 39.67 2.29
3000 4370 8.897872 AGAAATTTTTGCTCAGATTTCAATGT 57.102 26.923 14.18 0.00 39.67 2.71
3001 4371 9.807386 GAAGAAATTTTTGCTCAGATTTCAATG 57.193 29.630 14.18 0.00 39.67 2.82
3002 4372 8.706035 CGAAGAAATTTTTGCTCAGATTTCAAT 58.294 29.630 14.18 6.59 39.67 2.57
3003 4373 7.706179 ACGAAGAAATTTTTGCTCAGATTTCAA 59.294 29.630 14.18 0.00 39.67 2.69
3004 4374 7.202526 ACGAAGAAATTTTTGCTCAGATTTCA 58.797 30.769 14.18 0.00 39.67 2.69
3005 4375 7.629027 ACGAAGAAATTTTTGCTCAGATTTC 57.371 32.000 0.00 0.00 38.27 2.17
3006 4376 8.424274 AAACGAAGAAATTTTTGCTCAGATTT 57.576 26.923 0.00 0.00 0.00 2.17
3007 4377 8.424274 AAAACGAAGAAATTTTTGCTCAGATT 57.576 26.923 0.00 0.00 0.00 2.40
3008 4378 7.922811 AGAAAACGAAGAAATTTTTGCTCAGAT 59.077 29.630 0.00 0.00 0.00 2.90
3009 4379 7.257722 AGAAAACGAAGAAATTTTTGCTCAGA 58.742 30.769 0.00 0.00 0.00 3.27
3010 4380 7.433425 AGAGAAAACGAAGAAATTTTTGCTCAG 59.567 33.333 8.19 0.00 0.00 3.35
3011 4381 7.257722 AGAGAAAACGAAGAAATTTTTGCTCA 58.742 30.769 8.19 0.00 0.00 4.26
3012 4382 7.645735 AGAGAGAAAACGAAGAAATTTTTGCTC 59.354 33.333 0.00 0.00 33.28 4.26
3013 4383 7.484140 AGAGAGAAAACGAAGAAATTTTTGCT 58.516 30.769 0.00 0.00 0.00 3.91
3014 4384 7.645735 AGAGAGAGAAAACGAAGAAATTTTTGC 59.354 33.333 0.00 0.00 0.00 3.68
3015 4385 9.508567 AAGAGAGAGAAAACGAAGAAATTTTTG 57.491 29.630 0.00 0.00 0.00 2.44
3016 4386 9.508567 CAAGAGAGAGAAAACGAAGAAATTTTT 57.491 29.630 0.00 0.00 0.00 1.94
3017 4387 7.645735 GCAAGAGAGAGAAAACGAAGAAATTTT 59.354 33.333 0.00 0.00 0.00 1.82
3018 4388 7.135467 GCAAGAGAGAGAAAACGAAGAAATTT 58.865 34.615 0.00 0.00 0.00 1.82
3019 4389 6.260936 TGCAAGAGAGAGAAAACGAAGAAATT 59.739 34.615 0.00 0.00 0.00 1.82
3020 4390 5.760253 TGCAAGAGAGAGAAAACGAAGAAAT 59.240 36.000 0.00 0.00 0.00 2.17
3021 4391 5.116180 TGCAAGAGAGAGAAAACGAAGAAA 58.884 37.500 0.00 0.00 0.00 2.52
3022 4392 4.693283 TGCAAGAGAGAGAAAACGAAGAA 58.307 39.130 0.00 0.00 0.00 2.52
3023 4393 4.322080 TGCAAGAGAGAGAAAACGAAGA 57.678 40.909 0.00 0.00 0.00 2.87
3024 4394 4.450419 ACATGCAAGAGAGAGAAAACGAAG 59.550 41.667 0.00 0.00 0.00 3.79
3025 4395 4.380531 ACATGCAAGAGAGAGAAAACGAA 58.619 39.130 0.00 0.00 0.00 3.85
3026 4396 3.995199 ACATGCAAGAGAGAGAAAACGA 58.005 40.909 0.00 0.00 0.00 3.85
3027 4397 4.739046 AACATGCAAGAGAGAGAAAACG 57.261 40.909 0.00 0.00 0.00 3.60
3028 4398 7.095060 TGACATAACATGCAAGAGAGAGAAAAC 60.095 37.037 0.00 0.00 0.00 2.43
3029 4399 6.936335 TGACATAACATGCAAGAGAGAGAAAA 59.064 34.615 0.00 0.00 0.00 2.29
3030 4400 6.369890 GTGACATAACATGCAAGAGAGAGAAA 59.630 38.462 0.00 0.00 0.00 2.52
3031 4401 5.871524 GTGACATAACATGCAAGAGAGAGAA 59.128 40.000 0.00 0.00 0.00 2.87
3032 4402 5.186603 AGTGACATAACATGCAAGAGAGAGA 59.813 40.000 0.00 0.00 0.00 3.10
3033 4403 5.417811 AGTGACATAACATGCAAGAGAGAG 58.582 41.667 0.00 0.00 0.00 3.20
3034 4404 5.411831 AGTGACATAACATGCAAGAGAGA 57.588 39.130 0.00 0.00 0.00 3.10
3035 4405 5.640783 TCAAGTGACATAACATGCAAGAGAG 59.359 40.000 0.00 0.00 0.00 3.20
3036 4406 5.409520 GTCAAGTGACATAACATGCAAGAGA 59.590 40.000 6.57 0.00 44.18 3.10
3037 4407 5.625251 GTCAAGTGACATAACATGCAAGAG 58.375 41.667 6.57 0.00 44.18 2.85
3038 4408 5.611796 GTCAAGTGACATAACATGCAAGA 57.388 39.130 6.57 0.00 44.18 3.02
3051 4421 3.460857 ACCAAGTCTCAGTCAAGTGAC 57.539 47.619 3.12 3.12 45.08 3.67
3052 4422 5.607939 TTAACCAAGTCTCAGTCAAGTGA 57.392 39.130 0.00 0.00 0.00 3.41
3053 4423 6.708054 AGATTTAACCAAGTCTCAGTCAAGTG 59.292 38.462 0.00 0.00 0.00 3.16
3054 4424 6.831976 AGATTTAACCAAGTCTCAGTCAAGT 58.168 36.000 0.00 0.00 0.00 3.16
3055 4425 6.931281 TGAGATTTAACCAAGTCTCAGTCAAG 59.069 38.462 8.09 0.00 46.61 3.02
3056 4426 6.826668 TGAGATTTAACCAAGTCTCAGTCAA 58.173 36.000 8.09 0.00 46.61 3.18
3057 4427 6.419484 TGAGATTTAACCAAGTCTCAGTCA 57.581 37.500 8.09 0.00 46.61 3.41
3062 4432 5.573669 GTCGACTGAGATTTAACCAAGTCTC 59.426 44.000 8.70 3.67 44.01 3.36
3063 4433 5.244178 AGTCGACTGAGATTTAACCAAGTCT 59.756 40.000 19.30 0.00 33.74 3.24
3064 4434 5.471257 AGTCGACTGAGATTTAACCAAGTC 58.529 41.667 19.30 0.00 0.00 3.01
3065 4435 5.470047 AGTCGACTGAGATTTAACCAAGT 57.530 39.130 19.30 0.00 0.00 3.16
3066 4436 7.313646 TCTTAGTCGACTGAGATTTAACCAAG 58.686 38.462 30.05 19.19 34.24 3.61
3067 4437 7.223260 TCTTAGTCGACTGAGATTTAACCAA 57.777 36.000 30.05 11.47 34.24 3.67
3068 4438 6.829229 TCTTAGTCGACTGAGATTTAACCA 57.171 37.500 30.05 10.74 34.24 3.67
3069 4439 7.708998 AGATCTTAGTCGACTGAGATTTAACC 58.291 38.462 38.12 28.68 45.63 2.85
3070 4440 9.872757 CTAGATCTTAGTCGACTGAGATTTAAC 57.127 37.037 38.12 28.95 45.63 2.01
3071 4441 8.561212 GCTAGATCTTAGTCGACTGAGATTTAA 58.439 37.037 38.12 28.07 45.63 1.52
3072 4442 7.173562 GGCTAGATCTTAGTCGACTGAGATTTA 59.826 40.741 38.12 34.48 45.63 1.40
3073 4443 6.016610 GGCTAGATCTTAGTCGACTGAGATTT 60.017 42.308 38.12 35.03 45.63 2.17
3074 4444 5.472137 GGCTAGATCTTAGTCGACTGAGATT 59.528 44.000 38.12 30.42 45.63 2.40
3076 4446 4.141688 TGGCTAGATCTTAGTCGACTGAGA 60.142 45.833 33.88 33.88 41.83 3.27
3077 4447 4.024387 GTGGCTAGATCTTAGTCGACTGAG 60.024 50.000 26.80 26.80 0.00 3.35
3078 4448 3.878103 GTGGCTAGATCTTAGTCGACTGA 59.122 47.826 28.12 19.13 0.00 3.41
3079 4449 3.628032 TGTGGCTAGATCTTAGTCGACTG 59.372 47.826 28.12 12.46 0.00 3.51
3080 4450 3.628487 GTGTGGCTAGATCTTAGTCGACT 59.372 47.826 23.66 23.66 0.00 4.18
3081 4451 3.243134 GGTGTGGCTAGATCTTAGTCGAC 60.243 52.174 7.70 7.70 0.00 4.20
3082 4452 2.950309 GGTGTGGCTAGATCTTAGTCGA 59.050 50.000 0.00 0.00 0.00 4.20
3083 4453 2.034812 GGGTGTGGCTAGATCTTAGTCG 59.965 54.545 0.00 0.00 0.00 4.18
3084 4454 3.031736 TGGGTGTGGCTAGATCTTAGTC 58.968 50.000 0.00 0.00 0.00 2.59
3085 4455 3.116096 TGGGTGTGGCTAGATCTTAGT 57.884 47.619 0.00 0.00 0.00 2.24
3086 4456 4.696479 AATGGGTGTGGCTAGATCTTAG 57.304 45.455 0.00 0.00 0.00 2.18
3087 4457 6.084738 AGATAATGGGTGTGGCTAGATCTTA 58.915 40.000 0.00 0.00 0.00 2.10
3088 4458 4.910304 AGATAATGGGTGTGGCTAGATCTT 59.090 41.667 0.00 0.00 0.00 2.40
3089 4459 4.497516 AGATAATGGGTGTGGCTAGATCT 58.502 43.478 0.00 0.00 0.00 2.75
3090 4460 4.899352 AGATAATGGGTGTGGCTAGATC 57.101 45.455 0.00 0.00 0.00 2.75
3091 4461 5.370880 AGAAAGATAATGGGTGTGGCTAGAT 59.629 40.000 0.00 0.00 0.00 1.98
3092 4462 4.721776 AGAAAGATAATGGGTGTGGCTAGA 59.278 41.667 0.00 0.00 0.00 2.43
3093 4463 5.041191 AGAAAGATAATGGGTGTGGCTAG 57.959 43.478 0.00 0.00 0.00 3.42
3094 4464 4.442893 CGAGAAAGATAATGGGTGTGGCTA 60.443 45.833 0.00 0.00 0.00 3.93
3095 4465 3.682718 CGAGAAAGATAATGGGTGTGGCT 60.683 47.826 0.00 0.00 0.00 4.75
3096 4466 2.614057 CGAGAAAGATAATGGGTGTGGC 59.386 50.000 0.00 0.00 0.00 5.01
3097 4467 2.614057 GCGAGAAAGATAATGGGTGTGG 59.386 50.000 0.00 0.00 0.00 4.17
3098 4468 2.614057 GGCGAGAAAGATAATGGGTGTG 59.386 50.000 0.00 0.00 0.00 3.82
3099 4469 2.421529 GGGCGAGAAAGATAATGGGTGT 60.422 50.000 0.00 0.00 0.00 4.16
3100 4470 2.222027 GGGCGAGAAAGATAATGGGTG 58.778 52.381 0.00 0.00 0.00 4.61
3101 4471 1.143073 GGGGCGAGAAAGATAATGGGT 59.857 52.381 0.00 0.00 0.00 4.51
3102 4472 1.545651 GGGGGCGAGAAAGATAATGGG 60.546 57.143 0.00 0.00 0.00 4.00
3103 4473 1.421646 AGGGGGCGAGAAAGATAATGG 59.578 52.381 0.00 0.00 0.00 3.16
3104 4474 2.938956 AGGGGGCGAGAAAGATAATG 57.061 50.000 0.00 0.00 0.00 1.90
3105 4475 4.597507 TCATTAGGGGGCGAGAAAGATAAT 59.402 41.667 0.00 0.00 0.00 1.28
3106 4476 3.971305 TCATTAGGGGGCGAGAAAGATAA 59.029 43.478 0.00 0.00 0.00 1.75
3107 4477 3.323979 GTCATTAGGGGGCGAGAAAGATA 59.676 47.826 0.00 0.00 0.00 1.98
3108 4478 2.104963 GTCATTAGGGGGCGAGAAAGAT 59.895 50.000 0.00 0.00 0.00 2.40
3109 4479 1.485066 GTCATTAGGGGGCGAGAAAGA 59.515 52.381 0.00 0.00 0.00 2.52
3110 4480 1.486726 AGTCATTAGGGGGCGAGAAAG 59.513 52.381 0.00 0.00 0.00 2.62
3111 4481 1.580059 AGTCATTAGGGGGCGAGAAA 58.420 50.000 0.00 0.00 0.00 2.52
3112 4482 2.464796 TAGTCATTAGGGGGCGAGAA 57.535 50.000 0.00 0.00 0.00 2.87
3113 4483 2.464796 TTAGTCATTAGGGGGCGAGA 57.535 50.000 0.00 0.00 0.00 4.04
3114 4484 3.557264 GGATTTAGTCATTAGGGGGCGAG 60.557 52.174 0.00 0.00 0.00 5.03
3115 4485 2.370849 GGATTTAGTCATTAGGGGGCGA 59.629 50.000 0.00 0.00 0.00 5.54
3116 4486 2.372172 AGGATTTAGTCATTAGGGGGCG 59.628 50.000 0.00 0.00 0.00 6.13
3117 4487 3.498661 CCAGGATTTAGTCATTAGGGGGC 60.499 52.174 0.00 0.00 0.00 5.80
3118 4488 3.498661 GCCAGGATTTAGTCATTAGGGGG 60.499 52.174 0.00 0.00 0.00 5.40
3119 4489 3.395941 AGCCAGGATTTAGTCATTAGGGG 59.604 47.826 0.00 0.00 0.00 4.79
3120 4490 4.505742 GGAGCCAGGATTTAGTCATTAGGG 60.506 50.000 0.00 0.00 0.00 3.53
3121 4491 4.103153 TGGAGCCAGGATTTAGTCATTAGG 59.897 45.833 0.00 0.00 0.00 2.69
3122 4492 5.296151 TGGAGCCAGGATTTAGTCATTAG 57.704 43.478 0.00 0.00 0.00 1.73
3123 4493 5.912149 ATGGAGCCAGGATTTAGTCATTA 57.088 39.130 0.00 0.00 0.00 1.90
3124 4494 4.803329 ATGGAGCCAGGATTTAGTCATT 57.197 40.909 0.00 0.00 0.00 2.57
3125 4495 4.446889 GGAATGGAGCCAGGATTTAGTCAT 60.447 45.833 0.00 0.00 0.00 3.06
3126 4496 3.117888 GGAATGGAGCCAGGATTTAGTCA 60.118 47.826 0.00 0.00 0.00 3.41
3127 4497 3.137360 AGGAATGGAGCCAGGATTTAGTC 59.863 47.826 0.00 0.00 0.00 2.59
3128 4498 3.117738 CAGGAATGGAGCCAGGATTTAGT 60.118 47.826 0.00 0.00 0.00 2.24
3129 4499 3.484407 CAGGAATGGAGCCAGGATTTAG 58.516 50.000 0.00 0.00 0.00 1.85
3130 4500 2.423373 GCAGGAATGGAGCCAGGATTTA 60.423 50.000 0.00 0.00 0.00 1.40
3131 4501 1.687368 GCAGGAATGGAGCCAGGATTT 60.687 52.381 0.00 0.00 0.00 2.17
3132 4502 0.106318 GCAGGAATGGAGCCAGGATT 60.106 55.000 0.00 0.00 0.00 3.01
3133 4503 1.535685 GCAGGAATGGAGCCAGGAT 59.464 57.895 0.00 0.00 0.00 3.24
3134 4504 3.001514 GCAGGAATGGAGCCAGGA 58.998 61.111 0.00 0.00 0.00 3.86
3139 4509 4.883354 CCCGGGCAGGAATGGAGC 62.883 72.222 8.08 0.00 45.00 4.70
3140 4510 4.883354 GCCCGGGCAGGAATGGAG 62.883 72.222 40.73 0.15 45.00 3.86
3142 4512 4.447342 AAGCCCGGGCAGGAATGG 62.447 66.667 45.13 6.17 45.00 3.16
3143 4513 2.830370 GAAGCCCGGGCAGGAATG 60.830 66.667 45.13 7.02 45.00 2.67
3144 4514 3.017581 AGAAGCCCGGGCAGGAAT 61.018 61.111 45.13 25.85 45.00 3.01
3145 4515 3.717294 GAGAAGCCCGGGCAGGAA 61.717 66.667 45.13 0.00 45.00 3.36
3148 4518 2.388890 CTATGGAGAAGCCCGGGCAG 62.389 65.000 45.13 27.68 44.88 4.85
3149 4519 2.366301 TATGGAGAAGCCCGGGCA 60.366 61.111 45.13 25.95 44.88 5.36
3150 4520 2.384653 GACTATGGAGAAGCCCGGGC 62.385 65.000 39.29 39.29 42.33 6.13
3151 4521 1.749033 GACTATGGAGAAGCCCGGG 59.251 63.158 19.09 19.09 34.97 5.73
3152 4522 1.364171 CGACTATGGAGAAGCCCGG 59.636 63.158 0.00 0.00 34.97 5.73
3153 4523 1.300233 GCGACTATGGAGAAGCCCG 60.300 63.158 0.00 0.00 34.97 6.13
3154 4524 1.069935 GGCGACTATGGAGAAGCCC 59.930 63.158 0.00 0.00 40.45 5.19
3155 4525 1.069935 GGGCGACTATGGAGAAGCC 59.930 63.158 0.00 0.00 43.31 4.35
3156 4526 1.069935 GGGGCGACTATGGAGAAGC 59.930 63.158 0.00 0.00 0.00 3.86
3157 4527 0.390860 CTGGGGCGACTATGGAGAAG 59.609 60.000 0.00 0.00 0.00 2.85
3158 4528 0.032515 TCTGGGGCGACTATGGAGAA 60.033 55.000 0.00 0.00 0.00 2.87
3159 4529 0.188587 ATCTGGGGCGACTATGGAGA 59.811 55.000 0.00 0.00 0.00 3.71
3160 4530 1.051812 AATCTGGGGCGACTATGGAG 58.948 55.000 0.00 0.00 0.00 3.86
3161 4531 1.140852 CAAATCTGGGGCGACTATGGA 59.859 52.381 0.00 0.00 0.00 3.41
3162 4532 1.140852 TCAAATCTGGGGCGACTATGG 59.859 52.381 0.00 0.00 0.00 2.74
3163 4533 2.620251 TCAAATCTGGGGCGACTATG 57.380 50.000 0.00 0.00 0.00 2.23
3164 4534 3.864789 ATTCAAATCTGGGGCGACTAT 57.135 42.857 0.00 0.00 0.00 2.12
3165 4535 3.278574 CAATTCAAATCTGGGGCGACTA 58.721 45.455 0.00 0.00 0.00 2.59
3166 4536 2.094675 CAATTCAAATCTGGGGCGACT 58.905 47.619 0.00 0.00 0.00 4.18
3167 4537 1.134946 CCAATTCAAATCTGGGGCGAC 59.865 52.381 0.00 0.00 0.00 5.19
3168 4538 1.005332 TCCAATTCAAATCTGGGGCGA 59.995 47.619 0.00 0.00 0.00 5.54
3169 4539 1.473258 TCCAATTCAAATCTGGGGCG 58.527 50.000 0.00 0.00 0.00 6.13
3170 4540 4.834496 TCATATCCAATTCAAATCTGGGGC 59.166 41.667 0.00 0.00 0.00 5.80
3171 4541 5.479375 CCTCATATCCAATTCAAATCTGGGG 59.521 44.000 0.00 0.00 0.00 4.96
3172 4542 6.073314 ACCTCATATCCAATTCAAATCTGGG 58.927 40.000 0.00 0.00 0.00 4.45
3173 4543 7.002879 AGACCTCATATCCAATTCAAATCTGG 58.997 38.462 0.00 0.00 0.00 3.86
3174 4544 9.736414 ATAGACCTCATATCCAATTCAAATCTG 57.264 33.333 0.00 0.00 0.00 2.90
3175 4545 9.956640 GATAGACCTCATATCCAATTCAAATCT 57.043 33.333 0.00 0.00 0.00 2.40
3176 4546 9.171877 GGATAGACCTCATATCCAATTCAAATC 57.828 37.037 7.05 0.00 45.47 2.17
3186 4556 4.100808 GGCTGATGGATAGACCTCATATCC 59.899 50.000 5.26 5.26 46.08 2.59
3187 4557 4.100808 GGGCTGATGGATAGACCTCATATC 59.899 50.000 0.00 0.00 40.38 1.63
3188 4558 4.036518 GGGCTGATGGATAGACCTCATAT 58.963 47.826 0.00 0.00 40.38 1.78
3189 4559 3.445008 GGGCTGATGGATAGACCTCATA 58.555 50.000 0.00 0.00 40.38 2.15
3190 4560 2.264455 GGGCTGATGGATAGACCTCAT 58.736 52.381 0.00 0.00 40.38 2.90
3191 4561 1.722034 GGGCTGATGGATAGACCTCA 58.278 55.000 0.00 0.00 40.38 3.86
3192 4562 0.980423 GGGGCTGATGGATAGACCTC 59.020 60.000 0.00 0.00 43.26 3.85
3193 4563 0.833834 CGGGGCTGATGGATAGACCT 60.834 60.000 0.00 0.00 43.26 3.85
3194 4564 0.832135 TCGGGGCTGATGGATAGACC 60.832 60.000 0.00 0.00 42.97 3.85
3195 4565 0.605589 CTCGGGGCTGATGGATAGAC 59.394 60.000 0.00 0.00 0.00 2.59
3196 4566 1.188219 GCTCGGGGCTGATGGATAGA 61.188 60.000 0.00 0.00 38.06 1.98
3197 4567 1.294780 GCTCGGGGCTGATGGATAG 59.705 63.158 0.00 0.00 38.06 2.08
3198 4568 3.471620 GCTCGGGGCTGATGGATA 58.528 61.111 0.00 0.00 38.06 2.59
3208 4578 2.124278 GGCCCTAAAAGCTCGGGG 60.124 66.667 11.06 9.73 41.64 5.73
3209 4579 2.513897 CGGCCCTAAAAGCTCGGG 60.514 66.667 0.00 6.09 41.06 5.14
3210 4580 2.513897 CCGGCCCTAAAAGCTCGG 60.514 66.667 0.00 0.00 37.59 4.63
3211 4581 0.958876 AAACCGGCCCTAAAAGCTCG 60.959 55.000 0.00 0.00 0.00 5.03
3212 4582 2.118313 TAAACCGGCCCTAAAAGCTC 57.882 50.000 0.00 0.00 0.00 4.09
3213 4583 2.443416 CTTAAACCGGCCCTAAAAGCT 58.557 47.619 0.00 0.00 0.00 3.74
3214 4584 1.475280 CCTTAAACCGGCCCTAAAAGC 59.525 52.381 0.00 0.00 0.00 3.51
3215 4585 1.475280 GCCTTAAACCGGCCCTAAAAG 59.525 52.381 0.00 0.00 41.73 2.27
3216 4586 1.548081 GCCTTAAACCGGCCCTAAAA 58.452 50.000 0.00 0.00 41.73 1.52
3217 4587 0.677414 CGCCTTAAACCGGCCCTAAA 60.677 55.000 0.00 0.00 44.73 1.85
3218 4588 1.078285 CGCCTTAAACCGGCCCTAA 60.078 57.895 0.00 0.00 44.73 2.69
3219 4589 2.242797 GACGCCTTAAACCGGCCCTA 62.243 60.000 0.00 0.00 44.73 3.53
3220 4590 3.617143 GACGCCTTAAACCGGCCCT 62.617 63.158 0.00 0.00 44.73 5.19
3221 4591 3.129502 GACGCCTTAAACCGGCCC 61.130 66.667 0.00 0.00 44.73 5.80
3222 4592 3.129502 GGACGCCTTAAACCGGCC 61.130 66.667 0.00 3.80 46.55 6.13
3223 4593 3.493440 CGGACGCCTTAAACCGGC 61.493 66.667 0.00 0.00 44.11 6.13
3226 4596 1.228533 TCAAACGGACGCCTTAAACC 58.771 50.000 0.00 0.00 0.00 3.27
3227 4597 3.485633 GATTCAAACGGACGCCTTAAAC 58.514 45.455 0.00 0.00 0.00 2.01
3228 4598 2.158058 CGATTCAAACGGACGCCTTAAA 59.842 45.455 0.00 0.00 0.00 1.52
3229 4599 1.727880 CGATTCAAACGGACGCCTTAA 59.272 47.619 0.00 0.00 0.00 1.85
3230 4600 1.352114 CGATTCAAACGGACGCCTTA 58.648 50.000 0.00 0.00 0.00 2.69
3231 4601 1.908066 GCGATTCAAACGGACGCCTT 61.908 55.000 0.00 0.00 42.79 4.35
3232 4602 2.388232 GCGATTCAAACGGACGCCT 61.388 57.895 0.00 0.00 42.79 5.52
3233 4603 2.097728 GCGATTCAAACGGACGCC 59.902 61.111 0.00 0.00 42.79 5.68
3234 4604 1.908066 AAGGCGATTCAAACGGACGC 61.908 55.000 0.00 0.00 46.79 5.19
3235 4605 0.094730 GAAGGCGATTCAAACGGACG 59.905 55.000 0.00 0.00 37.88 4.79
3236 4606 1.439679 AGAAGGCGATTCAAACGGAC 58.560 50.000 3.46 0.00 40.67 4.79
3237 4607 2.178912 AAGAAGGCGATTCAAACGGA 57.821 45.000 3.46 0.00 40.67 4.69
3238 4608 2.484264 AGAAAGAAGGCGATTCAAACGG 59.516 45.455 3.46 0.00 40.67 4.44
3239 4609 3.813529 AGAAAGAAGGCGATTCAAACG 57.186 42.857 3.46 0.00 40.67 3.60
3240 4610 5.573146 CCATAGAAAGAAGGCGATTCAAAC 58.427 41.667 3.46 0.00 40.67 2.93
3241 4611 5.818136 CCATAGAAAGAAGGCGATTCAAA 57.182 39.130 3.46 0.00 40.67 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.