AutoCloner

Multiple sequence alignment - TraesCS7A01G550300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G550300	chr7A	100.000	5395	0	0	1	5395	724139279	724133885	0.000000e+00	9963.0
1	TraesCS7A01G550300	chr7A	98.214	56	0	1	5094	5149	406055401	406055347	4.450000e-16	97.1
2	TraesCS7A01G550300	chrUn	94.349	2318	98	15	2808	5094	92745675	92743360	0.000000e+00	3524.0
3	TraesCS7A01G550300	chrUn	89.436	1524	102	32	1256	2753	92747184	92745694	0.000000e+00	1868.0
4	TraesCS7A01G550300	chrUn	83.705	896	46	43	442	1273	92747989	92747130	0.000000e+00	754.0
5	TraesCS7A01G550300	chrUn	94.800	250	11	1	5146	5395	92743356	92743109	6.550000e-104	388.0
6	TraesCS7A01G550300	chr7B	91.053	2269	127	29	2392	4628	730180725	730178501	0.000000e+00	2996.0
7	TraesCS7A01G550300	chr7B	96.420	419	12	1	1926	2341	730181299	730180881	0.000000e+00	688.0
8	TraesCS7A01G550300	chr7B	76.690	1154	103	71	435	1553	730182521	730181499	6.280000e-134	488.0
9	TraesCS7A01G550300	chr7B	87.817	394	28	6	4720	5094	730174591	730174199	1.380000e-120	444.0
10	TraesCS7A01G550300	chr7B	88.506	261	17	7	5146	5395	730174195	730173937	2.440000e-78	303.0
11	TraesCS7A01G550300	chr7B	100.000	29	0	0	1475	1503	644072196	644072168	3.000000e-03	54.7
12	TraesCS7A01G550300	chr3A	78.723	705	132	13	3918	4619	529110643	529109954	6.370000e-124	455.0
13	TraesCS7A01G550300	chr3A	96.364	55	2	0	5094	5148	601604076	601604022	2.070000e-14	91.6
14	TraesCS7A01G550300	chr2A	83.784	148	24	0	2960	3107	660222241	660222388	2.030000e-29	141.0
15	TraesCS7A01G550300	chr6D	77.826	230	40	3	2093	2312	330158552	330158324	1.220000e-26	132.0
16	TraesCS7A01G550300	chr6B	77.533	227	40	3	2093	2309	490254719	490254944	5.670000e-25	126.0
17	TraesCS7A01G550300	chr6B	96.364	55	1	1	5095	5149	433103818	433103871	7.440000e-14	89.8
18	TraesCS7A01G550300	chr6B	97.297	37	1	0	3070	3106	700294	700330	4.510000e-06	63.9
19	TraesCS7A01G550300	chr6A	77.391	230	41	3	2093	2312	469433264	469433036	5.670000e-25	126.0
20	TraesCS7A01G550300	chr6A	100.000	53	0	0	5095	5147	191217668	191217616	1.240000e-16	99.0
21	TraesCS7A01G550300	chr2D	98.113	53	1	0	5094	5146	633437718	633437770	5.750000e-15	93.5
22	TraesCS7A01G550300	chr2B	98.077	52	1	0	5094	5145	670940821	670940770	2.070000e-14	91.6
23	TraesCS7A01G550300	chr2B	94.286	35	1	1	1474	1507	298513593	298513627	1.000000e-02	52.8
24	TraesCS7A01G550300	chr3B	98.039	51	1	0	5096	5146	367845149	367845199	7.440000e-14	89.8
25	TraesCS7A01G550300	chr7D	96.226	53	1	1	5097	5149	329051488	329051437	9.630000e-13	86.1
26	TraesCS7A01G550300	chr3D	94.545	55	2	1	5095	5149	473454691	473454638	3.460000e-12	84.2
27	TraesCS7A01G550300	chr4B	100.000	28	0	0	1480	1507	475013467	475013440	1.000000e-02	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G550300	chr7A	724133885	724139279	5394	True	9963.0	9963	100.0000	1	5395	1	chr7A.!!$R2	5394
1	TraesCS7A01G550300	chrUn	92743109	92747989	4880	True	1633.5	3524	90.5725	442	5395	4	chrUn.!!$R1	4953
2	TraesCS7A01G550300	chr7B	730173937	730182521	8584	True	983.8	2996	88.0972	435	5395	5	chr7B.!!$R2	4960
3	TraesCS7A01G550300	chr3A	529109954	529110643	689	True	455.0	455	78.7230	3918	4619	1	chr3A.!!$R1	701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
802	852	0.104672	TCCCAGACAACTTCCTCCCA	60.105	55.0	0.00	0.00	4.37	F
1269	1353	0.111061	ACAGCAATCTCTGTGGCCAA	59.889	50.0	7.24	44.88	4.52	F
1370	1454	0.329138	TTTCCCCCTAATCCCCTCCC	60.329	60.0	0.00	0.00	4.30	F
3136	3349	0.030101	CGCAGACGGCCTTTTTCAAA	59.970	50.0	0.00	40.31	2.69	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2114	2211	0.457851	CTCGGCGAAGGTGAAGATCT	59.542	55.0	12.13	0.00	0.00	2.75	R
3117	3329	0.030101	TTTGAAAAAGGCCGTCTGCG	59.970	50.0	0.00	0.00	42.61	5.18	R
3348	3563	1.710013	CAGCAGCAAGAATTTGGCTG	58.290	50.0	17.54	17.54	40.60	4.85	R
4477	4716	0.671251	TGACAACGGGAAACAATGGC	59.329	50.0	0.00	0.00	0.00	4.40	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	3.971150	CTCCATGACGACTATCCTTCAC	58.029	50.000	0.00	0.00	0.00	3.18
22	23	3.361786	TCCATGACGACTATCCTTCACA	58.638	45.455	0.00	0.00	0.00	3.58
23	24	3.381590	TCCATGACGACTATCCTTCACAG	59.618	47.826	0.00	0.00	0.00	3.66
24	25	3.491619	CCATGACGACTATCCTTCACAGG	60.492	52.174	0.00	0.00	42.50	4.00
32	33	2.300996	TCCTTCACAGGATCCAGCC	58.699	57.895	15.82	0.00	45.20	4.85
33	34	1.225704	CCTTCACAGGATCCAGCCC	59.774	63.158	15.82	0.00	44.19	5.19
34	35	1.153289	CTTCACAGGATCCAGCCCG	60.153	63.158	15.82	0.00	0.00	6.13
35	36	3.329542	TTCACAGGATCCAGCCCGC	62.330	63.158	15.82	0.00	0.00	6.13
36	37	3.790437	CACAGGATCCAGCCCGCT	61.790	66.667	15.82	0.00	0.00	5.52
37	38	3.790437	ACAGGATCCAGCCCGCTG	61.790	66.667	15.82	9.80	43.26	5.18
49	50	4.111016	CCGCTGCCACTACGACGA	62.111	66.667	0.00	0.00	0.00	4.20
50	51	2.126618	CGCTGCCACTACGACGAA	60.127	61.111	0.00	0.00	0.00	3.85
51	52	2.434134	CGCTGCCACTACGACGAAC	61.434	63.158	0.00	0.00	0.00	3.95
96	97	2.506438	CGACGTCGCTTCCCTTCC	60.506	66.667	26.59	0.00	0.00	3.46
97	98	2.125633	GACGTCGCTTCCCTTCCC	60.126	66.667	0.00	0.00	0.00	3.97
98	99	3.660732	GACGTCGCTTCCCTTCCCC	62.661	68.421	0.00	0.00	0.00	4.81
99	100	4.814294	CGTCGCTTCCCTTCCCCG	62.814	72.222	0.00	0.00	0.00	5.73
100	101	4.468689	GTCGCTTCCCTTCCCCGG	62.469	72.222	0.00	0.00	0.00	5.73
102	103	4.029809	CGCTTCCCTTCCCCGGTT	62.030	66.667	0.00	0.00	0.00	4.44
103	104	2.045242	GCTTCCCTTCCCCGGTTC	60.045	66.667	0.00	0.00	0.00	3.62
104	105	2.675371	CTTCCCTTCCCCGGTTCC	59.325	66.667	0.00	0.00	0.00	3.62
105	106	2.937136	TTCCCTTCCCCGGTTCCC	60.937	66.667	0.00	0.00	0.00	3.97
106	107	3.814391	TTCCCTTCCCCGGTTCCCA	62.814	63.158	0.00	0.00	0.00	4.37
107	108	3.021263	CCCTTCCCCGGTTCCCAT	61.021	66.667	0.00	0.00	0.00	4.00
108	109	2.595655	CCTTCCCCGGTTCCCATC	59.404	66.667	0.00	0.00	0.00	3.51
109	110	2.595655	CTTCCCCGGTTCCCATCC	59.404	66.667	0.00	0.00	0.00	3.51
110	111	3.018805	TTCCCCGGTTCCCATCCC	61.019	66.667	0.00	0.00	0.00	3.85
111	112	3.589627	TTCCCCGGTTCCCATCCCT	62.590	63.158	0.00	0.00	0.00	4.20
112	113	3.021263	CCCCGGTTCCCATCCCTT	61.021	66.667	0.00	0.00	0.00	3.95
113	114	1.694882	CCCCGGTTCCCATCCCTTA	60.695	63.158	0.00	0.00	0.00	2.69
114	115	1.705997	CCCCGGTTCCCATCCCTTAG	61.706	65.000	0.00	0.00	0.00	2.18
115	116	0.693092	CCCGGTTCCCATCCCTTAGA	60.693	60.000	0.00	0.00	0.00	2.10
116	117	0.759346	CCGGTTCCCATCCCTTAGAG	59.241	60.000	0.00	0.00	0.00	2.43
117	118	0.759346	CGGTTCCCATCCCTTAGAGG	59.241	60.000	0.00	0.00	34.30	3.69
118	119	1.691482	CGGTTCCCATCCCTTAGAGGA	60.691	57.143	0.00	0.00	37.67	3.71
120	121	3.757461	CGGTTCCCATCCCTTAGAGGATA	60.757	52.174	2.70	0.00	45.21	2.59
121	122	3.841255	GGTTCCCATCCCTTAGAGGATAG	59.159	52.174	2.70	0.00	45.21	2.08
122	123	4.450861	GGTTCCCATCCCTTAGAGGATAGA	60.451	50.000	2.70	1.59	45.21	1.98
123	124	5.155905	GTTCCCATCCCTTAGAGGATAGAA	58.844	45.833	2.70	6.26	45.21	2.10
124	125	5.640127	TCCCATCCCTTAGAGGATAGAAT	57.360	43.478	2.70	0.00	45.21	2.40
125	126	6.753090	TCCCATCCCTTAGAGGATAGAATA	57.247	41.667	2.70	0.00	45.21	1.75
126	127	7.317596	TCCCATCCCTTAGAGGATAGAATAT	57.682	40.000	2.70	0.00	45.21	1.28
127	128	7.366226	TCCCATCCCTTAGAGGATAGAATATC	58.634	42.308	2.70	0.00	45.21	1.63
128	129	7.035097	TCCCATCCCTTAGAGGATAGAATATCA	60.035	40.741	2.70	0.00	45.21	2.15
129	130	7.070571	CCCATCCCTTAGAGGATAGAATATCAC	59.929	44.444	2.70	0.00	45.21	3.06
130	131	7.201866	CCATCCCTTAGAGGATAGAATATCACG	60.202	44.444	2.70	0.00	45.21	4.35
131	132	6.791371	TCCCTTAGAGGATAGAATATCACGT	58.209	40.000	0.00	0.00	37.67	4.49
132	133	6.659668	TCCCTTAGAGGATAGAATATCACGTG	59.340	42.308	9.94	9.94	37.67	4.49
133	134	6.659668	CCCTTAGAGGATAGAATATCACGTGA	59.340	42.308	22.48	22.48	37.67	4.35
134	135	7.176865	CCCTTAGAGGATAGAATATCACGTGAA	59.823	40.741	24.13	12.36	37.67	3.18
135	136	8.577296	CCTTAGAGGATAGAATATCACGTGAAA	58.423	37.037	24.13	5.87	37.67	2.69
136	137	9.967346	CTTAGAGGATAGAATATCACGTGAAAA	57.033	33.333	24.13	14.36	0.00	2.29
137	138	9.745880	TTAGAGGATAGAATATCACGTGAAAAC	57.254	33.333	24.13	13.87	0.00	2.43
138	139	7.782049	AGAGGATAGAATATCACGTGAAAACA	58.218	34.615	24.13	8.62	0.00	2.83
139	140	8.258007	AGAGGATAGAATATCACGTGAAAACAA	58.742	33.333	24.13	7.31	0.00	2.83
140	141	8.786826	AGGATAGAATATCACGTGAAAACAAA	57.213	30.769	24.13	7.85	0.00	2.83
141	142	9.226606	AGGATAGAATATCACGTGAAAACAAAA	57.773	29.630	24.13	6.29	0.00	2.44
142	143	9.274065	GGATAGAATATCACGTGAAAACAAAAC	57.726	33.333	24.13	11.26	0.00	2.43
143	144	9.820229	GATAGAATATCACGTGAAAACAAAACA	57.180	29.630	24.13	3.06	0.00	2.83
146	147	9.180678	AGAATATCACGTGAAAACAAAACATTC	57.819	29.630	24.13	16.86	0.00	2.67
147	148	8.864069	AATATCACGTGAAAACAAAACATTCA	57.136	26.923	24.13	0.00	0.00	2.57
148	149	6.810888	ATCACGTGAAAACAAAACATTCAG	57.189	33.333	24.13	0.00	34.02	3.02
149	150	5.704888	TCACGTGAAAACAAAACATTCAGT	58.295	33.333	17.62	0.00	34.02	3.41
150	151	5.570973	TCACGTGAAAACAAAACATTCAGTG	59.429	36.000	17.62	0.00	35.69	3.66
151	152	4.862018	ACGTGAAAACAAAACATTCAGTGG	59.138	37.500	0.00	0.00	34.02	4.00
152	153	5.098893	CGTGAAAACAAAACATTCAGTGGA	58.901	37.500	0.00	0.00	34.02	4.02
153	154	5.574830	CGTGAAAACAAAACATTCAGTGGAA	59.425	36.000	0.00	0.00	34.02	3.53
154	155	6.090088	CGTGAAAACAAAACATTCAGTGGAAA	59.910	34.615	0.00	0.00	36.43	3.13
155	156	7.359598	CGTGAAAACAAAACATTCAGTGGAAAA	60.360	33.333	0.00	0.00	36.43	2.29
156	157	7.956943	GTGAAAACAAAACATTCAGTGGAAAAG	59.043	33.333	0.00	0.00	36.43	2.27
157	158	7.875041	TGAAAACAAAACATTCAGTGGAAAAGA	59.125	29.630	0.00	0.00	36.43	2.52
158	159	8.791327	AAAACAAAACATTCAGTGGAAAAGAT	57.209	26.923	0.00	0.00	36.43	2.40
159	160	7.775397	AACAAAACATTCAGTGGAAAAGATG	57.225	32.000	0.00	0.00	36.43	2.90
160	161	6.877236	ACAAAACATTCAGTGGAAAAGATGT	58.123	32.000	0.00	0.00	36.43	3.06
161	162	7.330262	ACAAAACATTCAGTGGAAAAGATGTT	58.670	30.769	0.00	0.00	35.25	2.71
162	163	7.823799	ACAAAACATTCAGTGGAAAAGATGTTT	59.176	29.630	6.47	6.47	41.05	2.83
163	164	8.330302	CAAAACATTCAGTGGAAAAGATGTTTC	58.670	33.333	11.28	0.00	39.63	2.78
164	165	5.762045	ACATTCAGTGGAAAAGATGTTTCG	58.238	37.500	0.00	0.00	36.43	3.46
165	166	5.530915	ACATTCAGTGGAAAAGATGTTTCGA	59.469	36.000	0.00	0.00	36.43	3.71
166	167	6.039270	ACATTCAGTGGAAAAGATGTTTCGAA	59.961	34.615	0.00	0.00	36.43	3.71
167	168	5.673337	TCAGTGGAAAAGATGTTTCGAAG	57.327	39.130	0.00	0.00	0.00	3.79
168	169	5.123227	TCAGTGGAAAAGATGTTTCGAAGT	58.877	37.500	0.00	0.00	0.00	3.01
169	170	5.588648	TCAGTGGAAAAGATGTTTCGAAGTT	59.411	36.000	0.00	0.00	0.00	2.66
170	171	6.094881	TCAGTGGAAAAGATGTTTCGAAGTTT	59.905	34.615	0.00	0.00	0.00	2.66
171	172	6.414987	CAGTGGAAAAGATGTTTCGAAGTTTC	59.585	38.462	0.00	3.54	0.00	2.78
209	210	6.943899	AAAGAAGAGAGATGTTAAGAGGGT	57.056	37.500	0.00	0.00	0.00	4.34
210	211	5.930837	AGAAGAGAGATGTTAAGAGGGTG	57.069	43.478	0.00	0.00	0.00	4.61
211	212	5.584913	AGAAGAGAGATGTTAAGAGGGTGA	58.415	41.667	0.00	0.00	0.00	4.02
212	213	6.201591	AGAAGAGAGATGTTAAGAGGGTGAT	58.798	40.000	0.00	0.00	0.00	3.06
213	214	5.867903	AGAGAGATGTTAAGAGGGTGATG	57.132	43.478	0.00	0.00	0.00	3.07
214	215	5.276440	AGAGAGATGTTAAGAGGGTGATGT	58.724	41.667	0.00	0.00	0.00	3.06
215	216	5.723887	AGAGAGATGTTAAGAGGGTGATGTT	59.276	40.000	0.00	0.00	0.00	2.71
216	217	5.738909	AGAGATGTTAAGAGGGTGATGTTG	58.261	41.667	0.00	0.00	0.00	3.33
217	218	5.249393	AGAGATGTTAAGAGGGTGATGTTGT	59.751	40.000	0.00	0.00	0.00	3.32
218	219	5.248640	AGATGTTAAGAGGGTGATGTTGTG	58.751	41.667	0.00	0.00	0.00	3.33
219	220	4.431416	TGTTAAGAGGGTGATGTTGTGT	57.569	40.909	0.00	0.00	0.00	3.72
220	221	4.385825	TGTTAAGAGGGTGATGTTGTGTC	58.614	43.478	0.00	0.00	0.00	3.67
221	222	2.169832	AAGAGGGTGATGTTGTGTCG	57.830	50.000	0.00	0.00	0.00	4.35
222	223	0.320771	AGAGGGTGATGTTGTGTCGC	60.321	55.000	0.00	0.00	0.00	5.19
223	224	1.298859	GAGGGTGATGTTGTGTCGCC	61.299	60.000	0.00	0.00	43.82	5.54
224	225	1.599518	GGGTGATGTTGTGTCGCCA	60.600	57.895	7.87	0.00	45.82	5.69
225	226	0.960364	GGGTGATGTTGTGTCGCCAT	60.960	55.000	7.87	0.00	45.82	4.40
226	227	0.168788	GGTGATGTTGTGTCGCCATG	59.831	55.000	1.12	0.00	43.95	3.66
227	228	0.454957	GTGATGTTGTGTCGCCATGC	60.455	55.000	0.00	0.00	0.00	4.06
240	241	2.000429	GCCATGCGAAATTTCAAGCT	58.000	45.000	17.99	2.55	0.00	3.74
241	242	1.922545	GCCATGCGAAATTTCAAGCTC	59.077	47.619	17.99	2.49	0.00	4.09
242	243	2.671914	GCCATGCGAAATTTCAAGCTCA	60.672	45.455	17.99	7.55	0.00	4.26
243	244	3.577667	CCATGCGAAATTTCAAGCTCAA	58.422	40.909	17.99	0.00	0.00	3.02
244	245	3.989167	CCATGCGAAATTTCAAGCTCAAA	59.011	39.130	17.99	0.00	0.00	2.69
245	246	4.090930	CCATGCGAAATTTCAAGCTCAAAG	59.909	41.667	17.99	0.00	0.00	2.77
246	247	3.641648	TGCGAAATTTCAAGCTCAAAGG	58.358	40.909	17.99	0.00	0.00	3.11
247	248	2.409715	GCGAAATTTCAAGCTCAAAGGC	59.590	45.455	17.99	5.46	0.00	4.35
248	249	2.658325	CGAAATTTCAAGCTCAAAGGCG	59.342	45.455	17.99	0.00	37.29	5.52
249	250	3.642705	GAAATTTCAAGCTCAAAGGCGT	58.357	40.909	13.40	0.00	37.29	5.68
250	251	3.733443	AATTTCAAGCTCAAAGGCGTT	57.267	38.095	0.00	0.00	37.29	4.84
251	252	4.846779	AATTTCAAGCTCAAAGGCGTTA	57.153	36.364	0.00	0.00	37.29	3.18
252	253	3.896648	TTTCAAGCTCAAAGGCGTTAG	57.103	42.857	0.00	0.00	37.29	2.34
253	254	2.831685	TCAAGCTCAAAGGCGTTAGA	57.168	45.000	0.00	0.00	37.29	2.10
254	255	3.120321	TCAAGCTCAAAGGCGTTAGAA	57.880	42.857	0.00	0.00	37.29	2.10
255	256	3.067106	TCAAGCTCAAAGGCGTTAGAAG	58.933	45.455	0.00	0.00	37.29	2.85
256	257	3.067106	CAAGCTCAAAGGCGTTAGAAGA	58.933	45.455	0.00	0.00	37.29	2.87
257	258	3.618690	AGCTCAAAGGCGTTAGAAGAT	57.381	42.857	0.00	0.00	37.29	2.40
258	259	3.265791	AGCTCAAAGGCGTTAGAAGATG	58.734	45.455	0.00	0.00	37.29	2.90
259	260	2.223135	GCTCAAAGGCGTTAGAAGATGC	60.223	50.000	0.00	0.00	0.00	3.91
260	261	3.265791	CTCAAAGGCGTTAGAAGATGCT	58.734	45.455	0.00	0.00	0.00	3.79
261	262	4.433615	CTCAAAGGCGTTAGAAGATGCTA	58.566	43.478	0.00	0.00	0.00	3.49
262	263	4.433615	TCAAAGGCGTTAGAAGATGCTAG	58.566	43.478	0.00	0.00	0.00	3.42
263	264	3.460857	AAGGCGTTAGAAGATGCTAGG	57.539	47.619	0.00	0.00	0.00	3.02
264	265	2.389715	AGGCGTTAGAAGATGCTAGGT	58.610	47.619	0.00	0.00	0.00	3.08
265	266	3.563223	AGGCGTTAGAAGATGCTAGGTA	58.437	45.455	0.00	0.00	0.00	3.08
266	267	4.153411	AGGCGTTAGAAGATGCTAGGTAT	58.847	43.478	0.00	0.00	0.00	2.73
267	268	5.322754	AGGCGTTAGAAGATGCTAGGTATA	58.677	41.667	0.00	0.00	0.00	1.47
268	269	5.773680	AGGCGTTAGAAGATGCTAGGTATAA	59.226	40.000	0.00	0.00	0.00	0.98
269	270	6.267014	AGGCGTTAGAAGATGCTAGGTATAAA	59.733	38.462	0.00	0.00	0.00	1.40
270	271	6.927381	GGCGTTAGAAGATGCTAGGTATAAAA	59.073	38.462	0.00	0.00	0.00	1.52
271	272	7.440255	GGCGTTAGAAGATGCTAGGTATAAAAA	59.560	37.037	0.00	0.00	0.00	1.94
299	300	5.971895	ACAAAATCAATGTTGAACAGTGC	57.028	34.783	19.66	0.00	43.17	4.40
300	301	4.810491	ACAAAATCAATGTTGAACAGTGCC	59.190	37.500	19.66	0.00	43.17	5.01
301	302	4.669206	AAATCAATGTTGAACAGTGCCA	57.331	36.364	19.66	5.32	43.17	4.92
302	303	4.669206	AATCAATGTTGAACAGTGCCAA	57.331	36.364	19.66	4.61	43.17	4.52
303	304	4.669206	ATCAATGTTGAACAGTGCCAAA	57.331	36.364	19.66	4.25	43.17	3.28
304	305	3.779759	TCAATGTTGAACAGTGCCAAAC	58.220	40.909	19.66	0.00	43.17	2.93
305	306	3.194329	TCAATGTTGAACAGTGCCAAACA	59.806	39.130	19.66	0.00	43.17	2.83
306	307	4.913461	TCAATGTTGAACAGTGCCAAACAC	60.913	41.667	19.66	0.00	43.17	3.32
307	308	7.295033	TCAATGTTGAACAGTGCCAAACACA	62.295	40.000	19.66	0.00	43.17	3.72
308	309	8.983097	TCAATGTTGAACAGTGCCAAACACAG	62.983	42.308	19.66	0.00	43.17	3.66
317	318	3.006659	TGCCAAACACAGTAATTTCGC	57.993	42.857	0.00	0.00	0.00	4.70
318	319	2.359214	TGCCAAACACAGTAATTTCGCA	59.641	40.909	0.00	0.00	30.85	5.10
319	320	3.005261	TGCCAAACACAGTAATTTCGCAT	59.995	39.130	0.00	0.00	28.75	4.73
320	321	3.364621	GCCAAACACAGTAATTTCGCATG	59.635	43.478	0.00	0.00	0.00	4.06
321	322	4.793071	CCAAACACAGTAATTTCGCATGA	58.207	39.130	0.00	0.00	0.00	3.07
322	323	4.616802	CCAAACACAGTAATTTCGCATGAC	59.383	41.667	0.00	0.00	0.00	3.06
323	324	5.211454	CAAACACAGTAATTTCGCATGACA	58.789	37.500	0.00	0.00	0.00	3.58
324	325	5.431420	AACACAGTAATTTCGCATGACAA	57.569	34.783	0.00	0.00	0.00	3.18
325	326	4.783242	ACACAGTAATTTCGCATGACAAC	58.217	39.130	0.00	0.00	0.00	3.32
326	327	4.274705	ACACAGTAATTTCGCATGACAACA	59.725	37.500	0.00	0.00	0.00	3.33
327	328	4.847757	CACAGTAATTTCGCATGACAACAG	59.152	41.667	0.00	0.00	0.00	3.16
328	329	4.083324	ACAGTAATTTCGCATGACAACAGG	60.083	41.667	0.00	0.00	0.00	4.00
329	330	4.154015	CAGTAATTTCGCATGACAACAGGA	59.846	41.667	0.00	0.00	0.00	3.86
330	331	3.559238	AATTTCGCATGACAACAGGAC	57.441	42.857	0.00	0.00	0.00	3.85
331	332	1.960417	TTTCGCATGACAACAGGACA	58.040	45.000	0.00	0.00	0.00	4.02
332	333	1.960417	TTCGCATGACAACAGGACAA	58.040	45.000	0.00	0.00	0.00	3.18
333	334	1.960417	TCGCATGACAACAGGACAAA	58.040	45.000	0.00	0.00	0.00	2.83
334	335	2.293170	TCGCATGACAACAGGACAAAA	58.707	42.857	0.00	0.00	0.00	2.44
335	336	2.685388	TCGCATGACAACAGGACAAAAA	59.315	40.909	0.00	0.00	0.00	1.94
360	361	6.544928	AAACCTCAACATCCCATATTTTCC	57.455	37.500	0.00	0.00	0.00	3.13
361	362	4.546674	ACCTCAACATCCCATATTTTCCC	58.453	43.478	0.00	0.00	0.00	3.97
362	363	4.232820	ACCTCAACATCCCATATTTTCCCT	59.767	41.667	0.00	0.00	0.00	4.20
363	364	4.829492	CCTCAACATCCCATATTTTCCCTC	59.171	45.833	0.00	0.00	0.00	4.30
364	365	5.399497	CCTCAACATCCCATATTTTCCCTCT	60.399	44.000	0.00	0.00	0.00	3.69
365	366	6.091076	TCAACATCCCATATTTTCCCTCTT	57.909	37.500	0.00	0.00	0.00	2.85
366	367	7.219601	TCAACATCCCATATTTTCCCTCTTA	57.780	36.000	0.00	0.00	0.00	2.10
367	368	7.290061	TCAACATCCCATATTTTCCCTCTTAG	58.710	38.462	0.00	0.00	0.00	2.18
368	369	7.128728	TCAACATCCCATATTTTCCCTCTTAGA	59.871	37.037	0.00	0.00	0.00	2.10
369	370	7.465900	ACATCCCATATTTTCCCTCTTAGAA	57.534	36.000	0.00	0.00	0.00	2.10
370	371	8.061890	ACATCCCATATTTTCCCTCTTAGAAT	57.938	34.615	0.00	0.00	0.00	2.40
371	372	8.514504	ACATCCCATATTTTCCCTCTTAGAATT	58.485	33.333	0.00	0.00	0.00	2.17
372	373	8.800332	CATCCCATATTTTCCCTCTTAGAATTG	58.200	37.037	0.00	0.00	0.00	2.32
373	374	7.882755	TCCCATATTTTCCCTCTTAGAATTGT	58.117	34.615	0.00	0.00	0.00	2.71
374	375	8.343787	TCCCATATTTTCCCTCTTAGAATTGTT	58.656	33.333	0.00	0.00	0.00	2.83
375	376	8.981659	CCCATATTTTCCCTCTTAGAATTGTTT	58.018	33.333	0.00	0.00	0.00	2.83
378	379	9.768215	ATATTTTCCCTCTTAGAATTGTTTCCA	57.232	29.630	0.00	0.00	31.84	3.53
379	380	7.906199	TTTTCCCTCTTAGAATTGTTTCCAA	57.094	32.000	0.00	0.00	31.84	3.53
380	381	7.906199	TTTCCCTCTTAGAATTGTTTCCAAA	57.094	32.000	0.00	0.00	33.44	3.28
381	382	7.906199	TTCCCTCTTAGAATTGTTTCCAAAA	57.094	32.000	0.00	0.00	33.44	2.44
382	383	7.284919	TCCCTCTTAGAATTGTTTCCAAAAC	57.715	36.000	0.00	0.00	33.44	2.43
383	384	7.066781	TCCCTCTTAGAATTGTTTCCAAAACT	58.933	34.615	4.40	0.00	33.44	2.66
384	385	7.563556	TCCCTCTTAGAATTGTTTCCAAAACTT	59.436	33.333	4.40	0.00	33.44	2.66
385	386	8.204160	CCCTCTTAGAATTGTTTCCAAAACTTT	58.796	33.333	4.40	0.00	33.44	2.66
386	387	9.249457	CCTCTTAGAATTGTTTCCAAAACTTTC	57.751	33.333	4.40	7.19	33.44	2.62
387	388	9.801873	CTCTTAGAATTGTTTCCAAAACTTTCA	57.198	29.630	14.96	5.29	33.44	2.69
391	392	7.738345	AGAATTGTTTCCAAAACTTTCAAACG	58.262	30.769	14.96	0.00	33.44	3.60
392	393	7.386573	AGAATTGTTTCCAAAACTTTCAAACGT	59.613	29.630	14.96	0.00	33.44	3.99
393	394	5.830900	TGTTTCCAAAACTTTCAAACGTG	57.169	34.783	0.00	0.00	30.92	4.49
394	395	4.686554	TGTTTCCAAAACTTTCAAACGTGG	59.313	37.500	0.00	0.00	30.92	4.94
395	396	4.522722	TTCCAAAACTTTCAAACGTGGT	57.477	36.364	0.00	0.00	0.00	4.16
396	397	4.522722	TCCAAAACTTTCAAACGTGGTT	57.477	36.364	0.00	0.00	0.00	3.67
397	398	4.884247	TCCAAAACTTTCAAACGTGGTTT	58.116	34.783	0.00	0.00	36.05	3.27
398	399	4.924462	TCCAAAACTTTCAAACGTGGTTTC	59.076	37.500	0.00	0.00	33.10	2.78
399	400	4.092237	CCAAAACTTTCAAACGTGGTTTCC	59.908	41.667	0.00	0.00	33.10	3.13
400	401	4.522722	AAACTTTCAAACGTGGTTTCCA	57.477	36.364	0.00	0.00	33.10	3.53
401	402	4.522722	AACTTTCAAACGTGGTTTCCAA	57.477	36.364	0.00	0.00	34.18	3.53
402	403	4.522722	ACTTTCAAACGTGGTTTCCAAA	57.477	36.364	0.00	0.00	34.18	3.28
403	404	4.239304	ACTTTCAAACGTGGTTTCCAAAC	58.761	39.130	0.00	0.00	34.18	2.93
412	413	1.204813	GTTTCCAAACCGTACGGCG	59.795	57.895	33.62	21.37	39.32	6.46
413	414	1.227497	TTTCCAAACCGTACGGCGT	60.227	52.632	33.62	19.64	39.32	5.68
414	415	0.813210	TTTCCAAACCGTACGGCGTT	60.813	50.000	33.62	24.08	39.32	4.84
415	416	1.497223	TTCCAAACCGTACGGCGTTG	61.497	55.000	33.62	31.78	39.32	4.10
416	417	2.552268	CAAACCGTACGGCGTTGG	59.448	61.111	33.62	22.95	39.32	3.77
417	418	2.108771	AAACCGTACGGCGTTGGT	59.891	55.556	33.62	25.10	39.32	3.67
418	419	1.955663	AAACCGTACGGCGTTGGTC	60.956	57.895	33.62	13.52	39.32	4.02
420	421	4.403137	CCGTACGGCGTTGGTCGA	62.403	66.667	23.44	0.00	46.20	4.20
421	422	2.202518	CGTACGGCGTTGGTCGAT	60.203	61.111	21.24	0.00	46.20	3.59
422	423	2.219562	CGTACGGCGTTGGTCGATC	61.220	63.158	21.24	0.00	46.20	3.69
423	424	2.100797	TACGGCGTTGGTCGATCG	59.899	61.111	21.24	9.36	46.20	3.69
424	425	2.397754	TACGGCGTTGGTCGATCGA	61.398	57.895	21.24	15.15	46.20	3.59
425	426	2.582202	TACGGCGTTGGTCGATCGAC	62.582	60.000	34.70	34.70	46.20	4.20
426	427	3.245315	GGCGTTGGTCGATCGACG	61.245	66.667	34.69	29.96	45.41	5.12
437	438	3.471244	GATCGACGAGGACCAGGCG	62.471	68.421	8.73	8.73	40.84	5.52
440	441	4.803426	GACGAGGACCAGGCGCTG	62.803	72.222	7.64	3.34	0.00	5.18
478	480	4.754667	GACGGGGTCCTTGTCGCC	62.755	72.222	0.00	0.00	35.07	5.54
506	508	2.579787	CGCGAGCCCGAGTTACAG	60.580	66.667	0.00	0.00	38.22	2.74
525	527	2.127906	CGACGAAAAACCGCCACG	60.128	61.111	0.00	0.00	0.00	4.94
540	542	2.460757	CCACGGTTATAATACGGGGG	57.539	55.000	20.14	14.44	46.91	5.40
544	555	1.817357	GGTTATAATACGGGGGCAGC	58.183	55.000	0.00	0.00	0.00	5.25
547	565	1.436326	TATAATACGGGGGCAGCCAA	58.564	50.000	15.19	0.00	0.00	4.52
574	592	4.717313	GACCCCGTTGACCCAGGC	62.717	72.222	0.00	0.00	0.00	4.85
576	594	4.722700	CCCCGTTGACCCAGGCAG	62.723	72.222	0.00	0.00	0.00	4.85
577	595	4.722700	CCCGTTGACCCAGGCAGG	62.723	72.222	0.00	0.00	37.03	4.85
578	596	3.636231	CCGTTGACCCAGGCAGGA	61.636	66.667	0.00	0.00	41.22	3.86
580	598	2.583441	CGTTGACCCAGGCAGGAGA	61.583	63.158	0.00	0.00	41.22	3.71
581	599	1.003233	GTTGACCCAGGCAGGAGAC	60.003	63.158	0.00	0.00	41.22	3.36
582	600	2.583441	TTGACCCAGGCAGGAGACG	61.583	63.158	0.00	0.00	41.22	4.18
583	601	2.680352	GACCCAGGCAGGAGACGA	60.680	66.667	0.00	0.00	41.22	4.20
584	602	2.997897	ACCCAGGCAGGAGACGAC	60.998	66.667	0.00	0.00	41.22	4.34
587	605	2.126307	CAGGCAGGAGACGACACG	60.126	66.667	0.00	0.00	0.00	4.49
588	606	4.057428	AGGCAGGAGACGACACGC	62.057	66.667	0.00	0.00	0.00	5.34
589	607	4.357947	GGCAGGAGACGACACGCA	62.358	66.667	0.00	0.00	0.00	5.24
591	609	2.430921	CAGGAGACGACACGCACC	60.431	66.667	0.00	0.00	0.00	5.01
593	611	4.736896	GGAGACGACACGCACCCC	62.737	72.222	0.00	0.00	0.00	4.95
594	612	3.681835	GAGACGACACGCACCCCT	61.682	66.667	0.00	0.00	0.00	4.79
596	614	3.681835	GACGACACGCACCCCTCT	61.682	66.667	0.00	0.00	0.00	3.69
645	663	2.020016	CGCGCGTGAGAAATTCGG	59.980	61.111	24.19	0.00	0.00	4.30
648	666	2.399611	GCGTGAGAAATTCGGCGG	59.600	61.111	7.21	0.00	0.00	6.13
649	667	3.089784	CGTGAGAAATTCGGCGGG	58.910	61.111	7.21	0.00	0.00	6.13
652	670	2.437716	GAGAAATTCGGCGGGGCA	60.438	61.111	7.21	0.00	0.00	5.36
654	672	2.437716	GAAATTCGGCGGGGCAGA	60.438	61.111	7.21	0.00	0.00	4.26
655	673	2.438434	AAATTCGGCGGGGCAGAG	60.438	61.111	7.21	0.00	33.94	3.35
669	712	5.803470	GCGGGGCAGAGGTATATATTTTTCT	60.803	44.000	0.00	0.00	0.00	2.52
671	714	6.181190	GGGGCAGAGGTATATATTTTTCTCC	58.819	44.000	0.00	0.00	0.00	3.71
731	780	3.314951	GGAGCAACTCCCTCCCTC	58.685	66.667	1.98	0.00	44.36	4.30
732	781	2.726351	GGAGCAACTCCCTCCCTCG	61.726	68.421	1.98	0.00	44.36	4.63
735	784	3.787001	CAACTCCCTCCCTCGCCC	61.787	72.222	0.00	0.00	0.00	6.13
767	816	0.906066	GTGGTTCTTCCTCCTCCTCC	59.094	60.000	0.00	0.00	37.07	4.30
770	819	1.491668	GTTCTTCCTCCTCCTCCTCC	58.508	60.000	0.00	0.00	0.00	4.30
777	826	2.260088	CTCCTCCTCCTCCTCGTCGT	62.260	65.000	0.00	0.00	0.00	4.34
792	842	1.829096	TCGTGGTCGTCCCAGACAA	60.829	57.895	0.00	0.00	46.45	3.18
802	852	0.104672	TCCCAGACAACTTCCTCCCA	60.105	55.000	0.00	0.00	0.00	4.37
854	904	1.136329	TCCTTCCTGGCTTCTTGGCT	61.136	55.000	0.00	0.00	42.34	4.75
870	920	1.271597	TGGCTTCTTCTTCTTGGCTCC	60.272	52.381	0.00	0.00	0.00	4.70
871	921	1.004161	GGCTTCTTCTTCTTGGCTCCT	59.996	52.381	0.00	0.00	0.00	3.69
891	946	2.112815	CCGGCCGGATTGGAACTTC	61.113	63.158	41.82	0.00	42.00	3.01
892	947	1.078426	CGGCCGGATTGGAACTTCT	60.078	57.895	20.10	0.00	42.00	2.85
893	948	0.676782	CGGCCGGATTGGAACTTCTT	60.677	55.000	20.10	0.00	42.00	2.52
1097	1171	0.317479	GGTACCGCTCGGATGCTAAT	59.683	55.000	15.95	0.00	38.96	1.73
1129	1206	4.764823	TCGCCCACTCATTTTTATCTTGTT	59.235	37.500	0.00	0.00	0.00	2.83
1160	1237	1.139498	TGCCCCCTTCCATGTGAGAA	61.139	55.000	0.00	0.00	0.00	2.87
1185	1262	8.442660	AGAATATTTTATCCTAGTCTCTGGGG	57.557	38.462	0.00	0.00	32.70	4.96
1190	1267	0.978146	TCCTAGTCTCTGGGGCTTGC	60.978	60.000	0.00	0.00	32.70	4.01
1191	1268	1.267574	CCTAGTCTCTGGGGCTTGCA	61.268	60.000	0.00	0.00	0.00	4.08
1203	1280	1.599047	GCTTGCAGAGGCCTCTACA	59.401	57.895	34.67	31.54	37.98	2.74
1210	1287	2.665165	CAGAGGCCTCTACAGACTGAT	58.335	52.381	34.67	6.47	37.98	2.90
1211	1288	3.030291	CAGAGGCCTCTACAGACTGATT	58.970	50.000	34.67	5.88	37.98	2.57
1264	1348	9.462174	TTTAATTTTGTTACAGCAATCTCTGTG	57.538	29.630	6.67	0.00	45.95	3.66
1265	1349	5.437289	TTTTGTTACAGCAATCTCTGTGG	57.563	39.130	6.67	0.00	45.95	4.17
1266	1350	2.426522	TGTTACAGCAATCTCTGTGGC	58.573	47.619	6.67	0.97	45.95	5.01
1267	1351	1.740025	GTTACAGCAATCTCTGTGGCC	59.260	52.381	0.00	0.00	45.95	5.36
1268	1352	0.983467	TACAGCAATCTCTGTGGCCA	59.017	50.000	0.00	0.00	45.95	5.36
1269	1353	0.111061	ACAGCAATCTCTGTGGCCAA	59.889	50.000	7.24	0.00	44.88	4.52
1270	1354	1.272313	ACAGCAATCTCTGTGGCCAAT	60.272	47.619	7.24	0.00	44.88	3.16
1271	1355	1.822990	CAGCAATCTCTGTGGCCAATT	59.177	47.619	7.24	0.00	0.00	2.32
1272	1356	2.232941	CAGCAATCTCTGTGGCCAATTT	59.767	45.455	7.24	0.00	0.00	1.82
1273	1357	2.901839	AGCAATCTCTGTGGCCAATTTT	59.098	40.909	7.24	0.00	0.00	1.82
1274	1358	3.325716	AGCAATCTCTGTGGCCAATTTTT	59.674	39.130	7.24	0.00	0.00	1.94
1347	1431	9.331282	GACTAACTAATATGCAGTTGGAGATTT	57.669	33.333	16.17	0.00	36.81	2.17
1348	1432	9.113838	ACTAACTAATATGCAGTTGGAGATTTG	57.886	33.333	16.17	0.79	36.81	2.32
1353	1437	9.643693	CTAATATGCAGTTGGAGATTTGTTTTT	57.356	29.630	0.00	0.00	30.24	1.94
1354	1438	8.538409	AATATGCAGTTGGAGATTTGTTTTTC	57.462	30.769	0.00	0.00	0.00	2.29
1355	1439	4.692228	TGCAGTTGGAGATTTGTTTTTCC	58.308	39.130	0.00	0.00	0.00	3.13
1356	1440	4.058124	GCAGTTGGAGATTTGTTTTTCCC	58.942	43.478	0.00	0.00	0.00	3.97
1369	1453	1.615659	TTTTCCCCCTAATCCCCTCC	58.384	55.000	0.00	0.00	0.00	4.30
1370	1454	0.329138	TTTCCCCCTAATCCCCTCCC	60.329	60.000	0.00	0.00	0.00	4.30
1404	1488	1.410083	GGATGGCCCTGTGCATTCTTA	60.410	52.381	0.00	0.00	43.89	2.10
1409	1497	2.760092	GGCCCTGTGCATTCTTAATGAA	59.240	45.455	3.86	0.00	43.89	2.57
1419	1507	7.595875	TGTGCATTCTTAATGAATTCAACTGTG	59.404	33.333	13.09	6.68	43.00	3.66
1436	1524	6.319405	TCAACTGTGATATTCCATTCATGTGG	59.681	38.462	0.00	0.00	40.76	4.17
1439	1527	4.581409	TGTGATATTCCATTCATGTGGCTG	59.419	41.667	0.00	0.00	39.19	4.85
1448	1536	4.546570	CATTCATGTGGCTGCAGAATATG	58.453	43.478	20.43	17.51	0.00	1.78
1486	1574	6.992123	TCATTGATTTGGCCATGTAGTACTAG	59.008	38.462	6.09	0.00	0.00	2.57
1491	1579	7.781219	TGATTTGGCCATGTAGTACTAGTACTA	59.219	37.037	30.50	30.50	43.98	1.82
1492	1580	7.578310	TTTGGCCATGTAGTACTAGTACTAG	57.422	40.000	33.38	25.30	45.97	2.57
1524	1612	1.203441	TCCTCTCCATGCTGCCACTT	61.203	55.000	0.00	0.00	0.00	3.16
1534	1622	1.350684	TGCTGCCACTTCTGTATTGGA	59.649	47.619	0.00	0.00	31.39	3.53
1535	1623	2.224744	TGCTGCCACTTCTGTATTGGAA	60.225	45.455	0.00	0.00	31.39	3.53
1536	1624	2.162408	GCTGCCACTTCTGTATTGGAAC	59.838	50.000	0.00	0.00	31.39	3.62
1540	1628	2.159627	CCACTTCTGTATTGGAACGCAC	59.840	50.000	0.00	0.00	31.39	5.34
1551	1639	1.070914	TGGAACGCACATACTTCACCA	59.929	47.619	0.00	0.00	0.00	4.17
1571	1659	8.474006	TCACCAATATATGATTATGTGCGTAC	57.526	34.615	0.00	0.00	0.00	3.67
1635	1723	3.726557	TGAATCCAACATTCCTGCTCT	57.273	42.857	0.00	0.00	0.00	4.09
1637	1725	3.760151	TGAATCCAACATTCCTGCTCTTG	59.240	43.478	0.00	0.00	0.00	3.02
1645	1733	5.382618	ACATTCCTGCTCTTGAAAATCAC	57.617	39.130	0.00	0.00	0.00	3.06
1651	1739	4.474113	CTGCTCTTGAAAATCACTTCTGC	58.526	43.478	0.00	0.00	0.00	4.26
1664	1752	2.021964	CTTCTGCTGATCGCTGCGTG	62.022	60.000	22.48	11.57	41.35	5.34
1681	1769	2.126596	TGCCAACCACCAAGTGCAG	61.127	57.895	0.00	0.00	31.34	4.41
1682	1770	1.827789	GCCAACCACCAAGTGCAGA	60.828	57.895	0.00	0.00	31.34	4.26
1685	1773	1.480137	CCAACCACCAAGTGCAGAAAA	59.520	47.619	0.00	0.00	31.34	2.29
1714	1802	9.632807	TTCTGTACAAATTATGTTTTATGTGCC	57.367	29.630	0.00	0.00	43.63	5.01
1726	1814	7.209471	TGTTTTATGTGCCGATTAGTTTCTT	57.791	32.000	0.00	0.00	0.00	2.52
1728	1816	8.138712	TGTTTTATGTGCCGATTAGTTTCTTTT	58.861	29.630	0.00	0.00	0.00	2.27
1729	1817	9.615295	GTTTTATGTGCCGATTAGTTTCTTTTA	57.385	29.630	0.00	0.00	0.00	1.52
1736	1824	7.279313	GTGCCGATTAGTTTCTTTTAGTATGGA	59.721	37.037	0.00	0.00	0.00	3.41
1737	1825	7.990886	TGCCGATTAGTTTCTTTTAGTATGGAT	59.009	33.333	0.00	0.00	0.00	3.41
1758	1846	6.917477	TGGATTCACTTGTTTCATTTCTTTCG	59.083	34.615	0.00	0.00	0.00	3.46
1766	1854	9.450807	ACTTGTTTCATTTCTTTCGTGAATAAG	57.549	29.630	0.00	0.00	35.21	1.73
1781	1870	8.181487	TCGTGAATAAGTAGTAACAATCTTGC	57.819	34.615	0.00	0.00	0.00	4.01
1790	1879	6.891908	AGTAGTAACAATCTTGCCCAAATGAT	59.108	34.615	0.00	0.00	0.00	2.45
1792	1881	7.100458	AGTAACAATCTTGCCCAAATGATAC	57.900	36.000	0.00	0.00	0.00	2.24
1793	1882	4.637483	ACAATCTTGCCCAAATGATACG	57.363	40.909	0.00	0.00	0.00	3.06
1794	1883	4.269183	ACAATCTTGCCCAAATGATACGA	58.731	39.130	0.00	0.00	0.00	3.43
1803	1892	6.434596	TGCCCAAATGATACGATTTAATTCG	58.565	36.000	16.06	16.06	44.56	3.34
1805	1894	5.856455	CCCAAATGATACGATTTAATTCGGC	59.144	40.000	20.30	11.58	43.33	5.54
1806	1895	5.856455	CCAAATGATACGATTTAATTCGGCC	59.144	40.000	20.30	11.10	43.33	6.13
1807	1896	5.622770	AATGATACGATTTAATTCGGCCC	57.377	39.130	20.30	10.83	43.33	5.80
1845	1934	7.233389	ACTTCAGTGTCATAGTAACTCACAT	57.767	36.000	0.00	0.00	0.00	3.21
1868	1957	9.233649	ACATCATCAAATGCATTGGTAAATTTT	57.766	25.926	13.82	0.00	39.62	1.82
1898	1992	6.491714	AGCAGAAACATCACCATCTAGTAT	57.508	37.500	0.00	0.00	0.00	2.12
1908	2002	7.730332	ACATCACCATCTAGTATCCATAGTTGA	59.270	37.037	0.00	0.00	0.00	3.18
1909	2003	8.588472	CATCACCATCTAGTATCCATAGTTGAA	58.412	37.037	0.00	0.00	0.00	2.69
1910	2004	8.183104	TCACCATCTAGTATCCATAGTTGAAG	57.817	38.462	0.00	0.00	0.00	3.02
1911	2005	6.870965	CACCATCTAGTATCCATAGTTGAAGC	59.129	42.308	0.00	0.00	0.00	3.86
1914	2008	6.656632	TCTAGTATCCATAGTTGAAGCCTG	57.343	41.667	0.00	0.00	0.00	4.85
1949	2043	7.231607	GCATTTGCTAATTATTATGCATGTGC	58.768	34.615	10.16	18.09	38.51	4.57
2114	2211	1.228644	TCGAGTCCCCGAACCTCAA	60.229	57.895	0.00	0.00	35.42	3.02
2445	2652	8.876275	TCGTTAAAAGTTAGTGATAGTGTTGT	57.124	30.769	0.00	0.00	0.00	3.32
2452	2659	8.813643	AAGTTAGTGATAGTGTTGTCTTGTAC	57.186	34.615	0.00	0.00	0.00	2.90
2459	2666	6.540551	TGATAGTGTTGTCTTGTACTTTTGCA	59.459	34.615	0.00	0.00	0.00	4.08
2500	2707	1.865788	GCATGCTTTCGGCCAAGTGA	61.866	55.000	11.37	0.00	40.92	3.41
2502	2709	1.203052	CATGCTTTCGGCCAAGTGAAT	59.797	47.619	2.24	0.00	40.92	2.57
2544	2751	1.299648	GCCATGGCCACAGTACTCA	59.700	57.895	27.24	0.00	34.56	3.41
2709	2920	4.048970	AGCACCACTCTCTTAGTCCTTA	57.951	45.455	0.00	0.00	35.76	2.69
2747	2958	7.524532	GCATATTCCAATACTCTGCTCTCACTA	60.525	40.741	0.00	0.00	0.00	2.74
2753	2964	7.229707	TCCAATACTCTGCTCTCACTAGTTATC	59.770	40.741	0.00	0.00	0.00	1.75
2755	2966	4.771903	ACTCTGCTCTCACTAGTTATCGA	58.228	43.478	0.00	0.00	0.00	3.59
2756	2967	4.814234	ACTCTGCTCTCACTAGTTATCGAG	59.186	45.833	0.00	0.00	0.00	4.04
2757	2968	3.562141	TCTGCTCTCACTAGTTATCGAGC	59.438	47.826	18.44	18.44	42.97	5.03
2758	2969	2.288186	TGCTCTCACTAGTTATCGAGCG	59.712	50.000	19.28	9.50	44.94	5.03
2791	3002	7.946655	TTATGCTATTCTTGACAAGTATCGG	57.053	36.000	14.75	8.63	0.00	4.18
2792	3003	5.339008	TGCTATTCTTGACAAGTATCGGT	57.661	39.130	14.75	0.00	0.00	4.69
2793	3004	6.459670	TGCTATTCTTGACAAGTATCGGTA	57.540	37.500	14.75	5.13	0.00	4.02
2794	3005	6.270815	TGCTATTCTTGACAAGTATCGGTAC	58.729	40.000	14.75	0.00	0.00	3.34
2795	3006	5.690857	GCTATTCTTGACAAGTATCGGTACC	59.309	44.000	14.75	0.16	0.00	3.34
2796	3007	5.670792	ATTCTTGACAAGTATCGGTACCA	57.329	39.130	13.54	0.00	0.00	3.25
2797	3008	5.670792	TTCTTGACAAGTATCGGTACCAT	57.329	39.130	13.54	7.35	0.00	3.55
2798	3009	6.778834	TTCTTGACAAGTATCGGTACCATA	57.221	37.500	13.54	6.35	0.00	2.74
2799	3010	6.778834	TCTTGACAAGTATCGGTACCATAA	57.221	37.500	13.54	0.00	0.00	1.90
2800	3011	7.356089	TCTTGACAAGTATCGGTACCATAAT	57.644	36.000	13.54	5.68	0.00	1.28
2801	3012	7.788026	TCTTGACAAGTATCGGTACCATAATT	58.212	34.615	13.54	11.13	0.00	1.40
2802	3013	7.709182	TCTTGACAAGTATCGGTACCATAATTG	59.291	37.037	25.83	25.83	37.65	2.32
2803	3014	7.114866	TGACAAGTATCGGTACCATAATTGA	57.885	36.000	29.93	15.57	36.02	2.57
2804	3015	7.732025	TGACAAGTATCGGTACCATAATTGAT	58.268	34.615	29.93	19.71	36.02	2.57
2805	3016	7.870954	TGACAAGTATCGGTACCATAATTGATC	59.129	37.037	29.93	24.91	36.02	2.92
2822	3033	2.434336	TGATCGGTACTGCTTATTGGCT	59.566	45.455	0.00	0.00	0.00	4.75
2918	3130	8.414778	AGTAGTACCAGATTCCTAAGATTTTCG	58.585	37.037	0.00	0.00	0.00	3.46
2947	3159	6.869913	TGCATTTCTCTAAAAAGGAATTGCTG	59.130	34.615	0.00	0.00	42.11	4.41
2952	3164	9.520515	TTTCTCTAAAAAGGAATTGCTGTATCT	57.479	29.630	0.00	0.00	0.00	1.98
3117	3329	2.070028	GAAGTGAGTCTTCTTTCGGCC	58.930	52.381	0.00	0.00	46.36	6.13
3136	3349	0.030101	CGCAGACGGCCTTTTTCAAA	59.970	50.000	0.00	0.00	40.31	2.69
3171	3386	6.603201	TCTGAAACAGTTCTCCTTTTGTCAAT	59.397	34.615	0.00	0.00	34.60	2.57
3251	3466	4.101942	GTGAAACTGCAACATCGTTTTCA	58.898	39.130	2.93	0.00	31.60	2.69
3259	3474	3.478516	GCAACATCGTTTTCATCGCATAC	59.521	43.478	0.00	0.00	0.00	2.39
3348	3563	4.142381	GCATCCACTAAATTGTCTGAACCC	60.142	45.833	0.00	0.00	0.00	4.11
3499	3718	8.635765	TGTGATCAAATTTACCTTTTAGCTCT	57.364	30.769	0.00	0.00	0.00	4.09
3514	3733	9.046296	CCTTTTAGCTCTGTTATGGTACTAATG	57.954	37.037	0.00	0.00	0.00	1.90
3565	3794	2.045536	CACTGCCTTGGAGCCTCC	60.046	66.667	2.98	2.98	36.96	4.30
3660	3889	4.067972	GGACTTCAAGGCGTCCAATATA	57.932	45.455	3.72	0.00	46.98	0.86
3679	3908	9.723447	CCAATATACTACTAGATTCAGTATGCG	57.277	37.037	15.17	0.00	36.43	4.73
3688	3917	7.382110	ACTAGATTCAGTATGCGCTATTGATT	58.618	34.615	9.73	7.56	34.76	2.57
3856	4085	1.076533	CACGAGTCATGGGCACGTAC	61.077	60.000	11.48	0.00	35.78	3.67
3927	4156	6.295039	ACGGTCACATTACAAACTAACAAG	57.705	37.500	0.00	0.00	0.00	3.16
3943	4173	2.079158	ACAAGGTGCATCATCTGTTCG	58.921	47.619	0.00	0.00	0.00	3.95
3953	4183	3.217599	TCATCTGTTCGTAGCACTGAC	57.782	47.619	0.00	0.00	0.00	3.51
3970	4204	4.687948	CACTGACTAACACTGACCATCTTG	59.312	45.833	0.00	0.00	0.00	3.02
3976	4210	2.440409	ACACTGACCATCTTGCATTCC	58.560	47.619	0.00	0.00	0.00	3.01
4468	4707	5.416271	TGGAGAATGTAAAGGTAGACCAC	57.584	43.478	0.66	0.00	38.89	4.16
4594	4836	4.811024	ACTCGTACGCATGAATTCAATGAT	59.189	37.500	13.09	1.71	0.00	2.45
4749	8853	6.656902	TGAAATTCCATACATCTTCTGCTCT	58.343	36.000	0.00	0.00	0.00	4.09
4783	8887	7.599998	GCAAACATTTGACTCATTACCAGAAAT	59.400	33.333	8.54	0.00	40.55	2.17
4794	8898	9.308000	ACTCATTACCAGAAATATTTCACCAAA	57.692	29.630	26.02	16.11	39.61	3.28
4855	8977	9.125906	GAAAATCATGAGACAGAAAAAGTGATG	57.874	33.333	0.09	0.00	0.00	3.07
4858	8980	6.768483	TCATGAGACAGAAAAAGTGATGGTA	58.232	36.000	0.00	0.00	0.00	3.25
4866	8988	7.054124	ACAGAAAAAGTGATGGTAGACTTTCA	58.946	34.615	0.00	0.00	40.68	2.69
4868	8990	8.072567	CAGAAAAAGTGATGGTAGACTTTCAAG	58.927	37.037	0.00	0.00	40.68	3.02
4887	9009	2.936202	AGCATGGTTCTGTTCAAGTGT	58.064	42.857	0.00	0.00	0.00	3.55
4912	9034	5.239306	TGAAGTTCTGTACATTTTCCTGCTG	59.761	40.000	4.17	0.00	0.00	4.41
5062	9186	5.649782	ATTTCTGATGCGGTCAAGATTTT	57.350	34.783	0.00	0.00	36.14	1.82
5073	9197	4.566360	CGGTCAAGATTTTGTTTTGTTGCT	59.434	37.500	0.00	0.00	35.73	3.91
5109	9233	8.806429	TTCTTCAAATTCTACCTATCAATGCA	57.194	30.769	0.00	0.00	0.00	3.96
5110	9234	8.806429	TCTTCAAATTCTACCTATCAATGCAA	57.194	30.769	0.00	0.00	0.00	4.08
5111	9235	9.412460	TCTTCAAATTCTACCTATCAATGCAAT	57.588	29.630	0.00	0.00	0.00	3.56
5112	9236	9.459640	CTTCAAATTCTACCTATCAATGCAATG	57.540	33.333	0.00	0.00	0.00	2.82
5113	9237	8.750515	TCAAATTCTACCTATCAATGCAATGA	57.249	30.769	6.97	6.97	0.00	2.57
5114	9238	9.358406	TCAAATTCTACCTATCAATGCAATGAT	57.642	29.630	20.55	20.55	42.52	2.45
5117	9241	9.797642	AATTCTACCTATCAATGCAATGATACA	57.202	29.630	18.52	3.98	40.44	2.29
5118	9242	8.607441	TTCTACCTATCAATGCAATGATACAC	57.393	34.615	18.52	0.00	40.44	2.90
5119	9243	7.734942	TCTACCTATCAATGCAATGATACACA	58.265	34.615	18.52	2.96	40.44	3.72
5120	9244	8.210265	TCTACCTATCAATGCAATGATACACAA	58.790	33.333	18.52	2.61	40.44	3.33
5121	9245	7.268199	ACCTATCAATGCAATGATACACAAG	57.732	36.000	18.52	11.36	40.44	3.16
5122	9246	6.147581	CCTATCAATGCAATGATACACAAGC	58.852	40.000	18.52	0.00	40.44	4.01
5123	9247	4.374843	TCAATGCAATGATACACAAGCC	57.625	40.909	0.00	0.00	34.31	4.35
5124	9248	4.018490	TCAATGCAATGATACACAAGCCT	58.982	39.130	0.00	0.00	34.31	4.58
5125	9249	4.463539	TCAATGCAATGATACACAAGCCTT	59.536	37.500	0.00	0.00	34.31	4.35
5126	9250	5.047164	TCAATGCAATGATACACAAGCCTTT	60.047	36.000	0.00	0.00	34.31	3.11
5127	9251	4.870123	TGCAATGATACACAAGCCTTTT	57.130	36.364	0.00	0.00	34.31	2.27
5128	9252	4.558178	TGCAATGATACACAAGCCTTTTG	58.442	39.130	0.00	0.00	34.31	2.44
5129	9253	3.368843	GCAATGATACACAAGCCTTTTGC	59.631	43.478	0.00	0.00	41.71	3.68
5171	9295	4.339247	ACAGAAAGTGATGGTGGACTTTTG	59.661	41.667	0.00	0.00	41.43	2.44
5182	9306	3.317993	GGTGGACTTTTGCTTTCTGCTAA	59.682	43.478	0.00	0.00	43.37	3.09
5185	9309	5.238650	GTGGACTTTTGCTTTCTGCTAACTA	59.761	40.000	0.00	0.00	43.37	2.24
5188	9312	6.305693	ACTTTTGCTTTCTGCTAACTACTG	57.694	37.500	0.00	0.00	43.37	2.74
5278	9403	3.960755	CACCCTTTCACTTTCCCTTTTCT	59.039	43.478	0.00	0.00	0.00	2.52
5313	9450	2.226674	GTGGGAAGCTCACTAACAAAGC	59.773	50.000	0.00	0.00	36.27	3.51
5314	9451	1.813178	GGGAAGCTCACTAACAAAGCC	59.187	52.381	0.00	0.00	36.69	4.35
5355	9492	4.479786	AGGAGCTTTCTTCAGTGGATAC	57.520	45.455	0.00	0.00	0.00	2.24
5384	9521	2.302260	TGAGGACGCTTAGAGGATCAG	58.698	52.381	0.00	0.00	37.82	2.90

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	3.381590	TGTGAAGGATAGTCGTCATGGAG	59.618	47.826	0.00	0.00	0.00	3.86
1	2	3.361786	TGTGAAGGATAGTCGTCATGGA	58.638	45.455	0.00	0.00	0.00	3.41
2	3	3.491619	CCTGTGAAGGATAGTCGTCATGG	60.492	52.174	0.00	0.00	0.00	3.66
3	4	3.381590	TCCTGTGAAGGATAGTCGTCATG	59.618	47.826	0.00	0.00	32.09	3.07
4	5	3.632333	TCCTGTGAAGGATAGTCGTCAT	58.368	45.455	0.00	0.00	32.09	3.06
5	6	3.081710	TCCTGTGAAGGATAGTCGTCA	57.918	47.619	0.00	0.00	32.09	4.35
14	15	1.274703	GGGCTGGATCCTGTGAAGGA	61.275	60.000	18.82	0.00	42.91	3.36
15	16	1.225704	GGGCTGGATCCTGTGAAGG	59.774	63.158	18.82	0.00	0.00	3.46
16	17	1.153289	CGGGCTGGATCCTGTGAAG	60.153	63.158	18.82	6.11	0.00	3.02
17	18	2.989639	CGGGCTGGATCCTGTGAA	59.010	61.111	18.82	0.00	0.00	3.18
18	19	3.785859	GCGGGCTGGATCCTGTGA	61.786	66.667	18.82	0.00	34.92	3.58
19	20	3.790437	AGCGGGCTGGATCCTGTG	61.790	66.667	18.82	10.85	34.92	3.66
20	21	3.790437	CAGCGGGCTGGATCCTGT	61.790	66.667	18.82	0.00	40.17	4.00
32	33	3.620300	TTCGTCGTAGTGGCAGCGG	62.620	63.158	0.00	0.00	0.00	5.52
33	34	2.126618	TTCGTCGTAGTGGCAGCG	60.127	61.111	0.00	0.00	0.00	5.18
34	35	2.434134	CGTTCGTCGTAGTGGCAGC	61.434	63.158	0.00	0.00	34.52	5.25
35	36	1.800315	CCGTTCGTCGTAGTGGCAG	60.800	63.158	0.00	0.00	37.94	4.85
36	37	2.191354	CTCCGTTCGTCGTAGTGGCA	62.191	60.000	0.00	0.00	37.94	4.92
37	38	1.513586	CTCCGTTCGTCGTAGTGGC	60.514	63.158	0.00	0.00	37.94	5.01
38	39	1.136147	CCTCCGTTCGTCGTAGTGG	59.864	63.158	0.00	0.00	37.94	4.00
39	40	1.513586	GCCTCCGTTCGTCGTAGTG	60.514	63.158	0.00	0.00	37.94	2.74
40	41	2.694760	GGCCTCCGTTCGTCGTAGT	61.695	63.158	0.00	0.00	37.94	2.73
41	42	2.101770	GGCCTCCGTTCGTCGTAG	59.898	66.667	0.00	0.00	37.94	3.51
42	43	3.803082	CGGCCTCCGTTCGTCGTA	61.803	66.667	0.00	0.00	42.73	3.43
79	80	2.506438	GGAAGGGAAGCGACGTCG	60.506	66.667	32.57	32.57	43.27	5.12
80	81	2.125633	GGGAAGGGAAGCGACGTC	60.126	66.667	5.18	5.18	0.00	4.34
81	82	3.703127	GGGGAAGGGAAGCGACGT	61.703	66.667	0.00	0.00	0.00	4.34
82	83	4.814294	CGGGGAAGGGAAGCGACG	62.814	72.222	0.00	0.00	0.00	5.12
83	84	4.468689	CCGGGGAAGGGAAGCGAC	62.469	72.222	0.00	0.00	0.00	5.19
85	86	3.971109	GAACCGGGGAAGGGAAGCG	62.971	68.421	6.32	0.00	35.02	4.68
86	87	2.045242	GAACCGGGGAAGGGAAGC	60.045	66.667	6.32	0.00	35.02	3.86
87	88	2.675371	GGAACCGGGGAAGGGAAG	59.325	66.667	6.32	0.00	35.02	3.46
88	89	2.937136	GGGAACCGGGGAAGGGAA	60.937	66.667	6.32	0.00	40.86	3.97
97	98	4.967712	TCCTCTAAGGGATGGGAACCGG	62.968	59.091	0.00	0.00	45.05	5.28
98	99	1.691482	TCCTCTAAGGGATGGGAACCG	60.691	57.143	0.00	0.00	45.05	4.44
99	100	2.191981	TCCTCTAAGGGATGGGAACC	57.808	55.000	0.00	0.00	43.06	3.62
100	101	4.753186	TCTATCCTCTAAGGGATGGGAAC	58.247	47.826	6.30	0.00	44.85	3.62
101	102	5.434003	TTCTATCCTCTAAGGGATGGGAA	57.566	43.478	6.30	7.60	44.85	3.97
102	103	5.640127	ATTCTATCCTCTAAGGGATGGGA	57.360	43.478	6.30	0.00	44.85	4.37
103	104	7.070571	GTGATATTCTATCCTCTAAGGGATGGG	59.929	44.444	6.30	0.60	44.85	4.00
104	105	7.201866	CGTGATATTCTATCCTCTAAGGGATGG	60.202	44.444	6.30	3.73	44.85	3.51
105	106	7.340743	ACGTGATATTCTATCCTCTAAGGGATG	59.659	40.741	6.30	0.00	44.85	3.51
106	107	7.340743	CACGTGATATTCTATCCTCTAAGGGAT	59.659	40.741	10.90	0.00	46.60	3.85
107	108	6.659668	CACGTGATATTCTATCCTCTAAGGGA	59.340	42.308	10.90	0.00	39.95	4.20
108	109	6.659668	TCACGTGATATTCTATCCTCTAAGGG	59.340	42.308	15.76	0.00	35.59	3.95
109	110	7.689446	TCACGTGATATTCTATCCTCTAAGG	57.311	40.000	15.76	0.00	36.46	2.69
110	111	9.967346	TTTTCACGTGATATTCTATCCTCTAAG	57.033	33.333	20.80	0.00	0.00	2.18
111	112	9.745880	GTTTTCACGTGATATTCTATCCTCTAA	57.254	33.333	20.80	2.06	0.00	2.10
112	113	8.909923	TGTTTTCACGTGATATTCTATCCTCTA	58.090	33.333	20.80	0.00	0.00	2.43
113	114	7.782049	TGTTTTCACGTGATATTCTATCCTCT	58.218	34.615	20.80	0.00	0.00	3.69
114	115	8.420374	TTGTTTTCACGTGATATTCTATCCTC	57.580	34.615	20.80	1.16	0.00	3.71
115	116	8.786826	TTTGTTTTCACGTGATATTCTATCCT	57.213	30.769	20.80	0.00	0.00	3.24
116	117	9.274065	GTTTTGTTTTCACGTGATATTCTATCC	57.726	33.333	20.80	0.18	0.00	2.59
117	118	9.820229	TGTTTTGTTTTCACGTGATATTCTATC	57.180	29.630	20.80	8.42	0.00	2.08
120	121	9.180678	GAATGTTTTGTTTTCACGTGATATTCT	57.819	29.630	20.80	0.00	0.00	2.40
121	122	8.963130	TGAATGTTTTGTTTTCACGTGATATTC	58.037	29.630	20.80	14.13	0.00	1.75
122	123	8.864069	TGAATGTTTTGTTTTCACGTGATATT	57.136	26.923	20.80	5.22	0.00	1.28
123	124	8.134895	ACTGAATGTTTTGTTTTCACGTGATAT	58.865	29.630	20.80	0.00	0.00	1.63
124	125	7.430793	CACTGAATGTTTTGTTTTCACGTGATA	59.569	33.333	20.80	12.38	34.31	2.15
125	126	6.253298	CACTGAATGTTTTGTTTTCACGTGAT	59.747	34.615	20.80	0.00	34.31	3.06
126	127	5.570973	CACTGAATGTTTTGTTTTCACGTGA	59.429	36.000	15.76	15.76	34.31	4.35
127	128	5.220191	CCACTGAATGTTTTGTTTTCACGTG	60.220	40.000	9.94	9.94	33.38	4.49
128	129	4.862018	CCACTGAATGTTTTGTTTTCACGT	59.138	37.500	0.00	0.00	0.00	4.49
129	130	5.098893	TCCACTGAATGTTTTGTTTTCACG	58.901	37.500	0.00	0.00	0.00	4.35
130	131	6.959671	TTCCACTGAATGTTTTGTTTTCAC	57.040	33.333	0.00	0.00	0.00	3.18
131	132	7.875041	TCTTTTCCACTGAATGTTTTGTTTTCA	59.125	29.630	0.00	0.00	0.00	2.69
132	133	8.250538	TCTTTTCCACTGAATGTTTTGTTTTC	57.749	30.769	0.00	0.00	0.00	2.29
133	134	8.667463	CATCTTTTCCACTGAATGTTTTGTTTT	58.333	29.630	0.00	0.00	0.00	2.43
134	135	7.823799	ACATCTTTTCCACTGAATGTTTTGTTT	59.176	29.630	0.00	0.00	0.00	2.83
135	136	7.330262	ACATCTTTTCCACTGAATGTTTTGTT	58.670	30.769	0.00	0.00	0.00	2.83
136	137	6.877236	ACATCTTTTCCACTGAATGTTTTGT	58.123	32.000	0.00	0.00	0.00	2.83
137	138	7.775397	AACATCTTTTCCACTGAATGTTTTG	57.225	32.000	0.00	0.00	29.87	2.44
138	139	7.222611	CGAAACATCTTTTCCACTGAATGTTTT	59.777	33.333	11.28	0.00	38.83	2.43
139	140	6.697019	CGAAACATCTTTTCCACTGAATGTTT	59.303	34.615	10.14	10.14	40.23	2.83
140	141	6.039270	TCGAAACATCTTTTCCACTGAATGTT	59.961	34.615	0.00	0.00	33.55	2.71
141	142	5.530915	TCGAAACATCTTTTCCACTGAATGT	59.469	36.000	0.00	0.00	0.00	2.71
142	143	6.000891	TCGAAACATCTTTTCCACTGAATG	57.999	37.500	0.00	0.00	0.00	2.67
143	144	6.263168	ACTTCGAAACATCTTTTCCACTGAAT	59.737	34.615	0.00	0.00	0.00	2.57
144	145	5.588648	ACTTCGAAACATCTTTTCCACTGAA	59.411	36.000	0.00	0.00	0.00	3.02
145	146	5.123227	ACTTCGAAACATCTTTTCCACTGA	58.877	37.500	0.00	0.00	0.00	3.41
146	147	5.424121	ACTTCGAAACATCTTTTCCACTG	57.576	39.130	0.00	0.00	0.00	3.66
147	148	6.451064	AAACTTCGAAACATCTTTTCCACT	57.549	33.333	0.00	0.00	0.00	4.00
148	149	6.733721	GAAACTTCGAAACATCTTTTCCAC	57.266	37.500	0.00	0.00	0.00	4.02
184	185	7.663493	CACCCTCTTAACATCTCTCTTCTTTTT	59.337	37.037	0.00	0.00	0.00	1.94
185	186	7.016661	TCACCCTCTTAACATCTCTCTTCTTTT	59.983	37.037	0.00	0.00	0.00	2.27
186	187	6.498651	TCACCCTCTTAACATCTCTCTTCTTT	59.501	38.462	0.00	0.00	0.00	2.52
187	188	6.019748	TCACCCTCTTAACATCTCTCTTCTT	58.980	40.000	0.00	0.00	0.00	2.52
188	189	5.584913	TCACCCTCTTAACATCTCTCTTCT	58.415	41.667	0.00	0.00	0.00	2.85
189	190	5.923733	TCACCCTCTTAACATCTCTCTTC	57.076	43.478	0.00	0.00	0.00	2.87
190	191	5.723887	ACATCACCCTCTTAACATCTCTCTT	59.276	40.000	0.00	0.00	0.00	2.85
191	192	5.276440	ACATCACCCTCTTAACATCTCTCT	58.724	41.667	0.00	0.00	0.00	3.10
192	193	5.606348	ACATCACCCTCTTAACATCTCTC	57.394	43.478	0.00	0.00	0.00	3.20
193	194	5.249393	ACAACATCACCCTCTTAACATCTCT	59.751	40.000	0.00	0.00	0.00	3.10
194	195	5.352569	CACAACATCACCCTCTTAACATCTC	59.647	44.000	0.00	0.00	0.00	2.75
195	196	5.221925	ACACAACATCACCCTCTTAACATCT	60.222	40.000	0.00	0.00	0.00	2.90
196	197	5.003804	ACACAACATCACCCTCTTAACATC	58.996	41.667	0.00	0.00	0.00	3.06
197	198	4.985538	ACACAACATCACCCTCTTAACAT	58.014	39.130	0.00	0.00	0.00	2.71
198	199	4.385825	GACACAACATCACCCTCTTAACA	58.614	43.478	0.00	0.00	0.00	2.41
199	200	3.432252	CGACACAACATCACCCTCTTAAC	59.568	47.826	0.00	0.00	0.00	2.01
200	201	3.659786	CGACACAACATCACCCTCTTAA	58.340	45.455	0.00	0.00	0.00	1.85
201	202	2.611971	GCGACACAACATCACCCTCTTA	60.612	50.000	0.00	0.00	0.00	2.10
202	203	1.878102	GCGACACAACATCACCCTCTT	60.878	52.381	0.00	0.00	0.00	2.85
203	204	0.320771	GCGACACAACATCACCCTCT	60.321	55.000	0.00	0.00	0.00	3.69
204	205	1.298859	GGCGACACAACATCACCCTC	61.299	60.000	0.00	0.00	0.00	4.30
205	206	1.302511	GGCGACACAACATCACCCT	60.303	57.895	0.00	0.00	0.00	4.34
206	207	1.599518	TGGCGACACAACATCACCC	60.600	57.895	0.00	0.00	33.40	4.61
207	208	4.057224	TGGCGACACAACATCACC	57.943	55.556	0.00	0.00	33.40	4.02
221	222	1.922545	GAGCTTGAAATTTCGCATGGC	59.077	47.619	17.00	13.55	0.00	4.40
222	223	3.220507	TGAGCTTGAAATTTCGCATGG	57.779	42.857	17.00	6.22	0.00	3.66
223	224	4.090930	CCTTTGAGCTTGAAATTTCGCATG	59.909	41.667	17.00	7.64	0.00	4.06
224	225	4.240096	CCTTTGAGCTTGAAATTTCGCAT	58.760	39.130	17.00	3.46	0.00	4.73
225	226	3.641648	CCTTTGAGCTTGAAATTTCGCA	58.358	40.909	17.00	5.52	0.00	5.10
226	227	2.409715	GCCTTTGAGCTTGAAATTTCGC	59.590	45.455	13.34	11.18	0.00	4.70
227	228	2.658325	CGCCTTTGAGCTTGAAATTTCG	59.342	45.455	13.34	1.48	0.00	3.46
228	229	3.642705	ACGCCTTTGAGCTTGAAATTTC	58.357	40.909	11.41	11.41	0.00	2.17
229	230	3.733443	ACGCCTTTGAGCTTGAAATTT	57.267	38.095	0.00	0.00	0.00	1.82
230	231	3.733443	AACGCCTTTGAGCTTGAAATT	57.267	38.095	0.00	0.00	0.00	1.82
231	232	4.072131	TCTAACGCCTTTGAGCTTGAAAT	58.928	39.130	0.00	0.00	0.00	2.17
232	233	3.472652	TCTAACGCCTTTGAGCTTGAAA	58.527	40.909	0.00	0.00	0.00	2.69
233	234	3.120321	TCTAACGCCTTTGAGCTTGAA	57.880	42.857	0.00	0.00	0.00	2.69
234	235	2.831685	TCTAACGCCTTTGAGCTTGA	57.168	45.000	0.00	0.00	0.00	3.02
235	236	3.067106	TCTTCTAACGCCTTTGAGCTTG	58.933	45.455	0.00	0.00	0.00	4.01
236	237	3.402628	TCTTCTAACGCCTTTGAGCTT	57.597	42.857	0.00	0.00	0.00	3.74
237	238	3.265791	CATCTTCTAACGCCTTTGAGCT	58.734	45.455	0.00	0.00	0.00	4.09
238	239	2.223135	GCATCTTCTAACGCCTTTGAGC	60.223	50.000	0.00	0.00	0.00	4.26
239	240	3.265791	AGCATCTTCTAACGCCTTTGAG	58.734	45.455	0.00	0.00	0.00	3.02
240	241	3.334583	AGCATCTTCTAACGCCTTTGA	57.665	42.857	0.00	0.00	0.00	2.69
241	242	3.557595	CCTAGCATCTTCTAACGCCTTTG	59.442	47.826	0.00	0.00	0.00	2.77
242	243	3.197983	ACCTAGCATCTTCTAACGCCTTT	59.802	43.478	0.00	0.00	0.00	3.11
243	244	2.766828	ACCTAGCATCTTCTAACGCCTT	59.233	45.455	0.00	0.00	0.00	4.35
244	245	2.389715	ACCTAGCATCTTCTAACGCCT	58.610	47.619	0.00	0.00	0.00	5.52
245	246	2.892784	ACCTAGCATCTTCTAACGCC	57.107	50.000	0.00	0.00	0.00	5.68
246	247	7.941795	TTTTATACCTAGCATCTTCTAACGC	57.058	36.000	0.00	0.00	0.00	4.84
276	277	5.294060	GGCACTGTTCAACATTGATTTTGTT	59.706	36.000	11.88	0.00	37.79	2.83
277	278	4.810491	GGCACTGTTCAACATTGATTTTGT	59.190	37.500	11.88	0.00	37.00	2.83
278	279	4.809958	TGGCACTGTTCAACATTGATTTTG	59.190	37.500	11.88	0.00	37.00	2.44
279	280	5.021033	TGGCACTGTTCAACATTGATTTT	57.979	34.783	11.88	0.00	37.00	1.82
280	281	4.669206	TGGCACTGTTCAACATTGATTT	57.331	36.364	11.88	0.00	37.00	2.17
281	282	4.669206	TTGGCACTGTTCAACATTGATT	57.331	36.364	11.88	0.00	37.00	2.57
282	283	4.141981	TGTTTGGCACTGTTCAACATTGAT	60.142	37.500	11.88	0.00	37.00	2.57
283	284	3.194329	TGTTTGGCACTGTTCAACATTGA	59.806	39.130	11.88	0.00	31.30	2.57
284	285	3.306703	GTGTTTGGCACTGTTCAACATTG	59.693	43.478	3.52	3.52	44.41	2.82
285	286	3.520569	GTGTTTGGCACTGTTCAACATT	58.479	40.909	3.75	0.00	44.41	2.71
286	287	3.163630	GTGTTTGGCACTGTTCAACAT	57.836	42.857	3.75	0.00	44.41	2.71
287	288	2.645730	GTGTTTGGCACTGTTCAACA	57.354	45.000	0.00	0.00	44.41	3.33
295	296	7.231762	ATGCGAAATTACTGTGTTTGGCACT	62.232	40.000	22.14	13.82	46.53	4.40
296	297	3.793801	TGCGAAATTACTGTGTTTGGCAC	60.794	43.478	18.60	0.00	41.77	5.01
297	298	2.359214	TGCGAAATTACTGTGTTTGGCA	59.641	40.909	18.60	18.60	43.49	4.92
298	299	3.006659	TGCGAAATTACTGTGTTTGGC	57.993	42.857	15.31	15.31	38.84	4.52
299	300	4.616802	GTCATGCGAAATTACTGTGTTTGG	59.383	41.667	0.00	0.00	0.00	3.28
300	301	5.211454	TGTCATGCGAAATTACTGTGTTTG	58.789	37.500	0.00	0.00	0.00	2.93
301	302	5.431420	TGTCATGCGAAATTACTGTGTTT	57.569	34.783	0.00	0.00	0.00	2.83
302	303	5.212194	GTTGTCATGCGAAATTACTGTGTT	58.788	37.500	0.00	0.00	0.00	3.32
303	304	4.274705	TGTTGTCATGCGAAATTACTGTGT	59.725	37.500	0.00	0.00	0.00	3.72
304	305	4.782156	TGTTGTCATGCGAAATTACTGTG	58.218	39.130	0.00	0.00	0.00	3.66
305	306	4.083324	CCTGTTGTCATGCGAAATTACTGT	60.083	41.667	0.00	0.00	0.00	3.55
306	307	4.154015	TCCTGTTGTCATGCGAAATTACTG	59.846	41.667	0.00	0.00	0.00	2.74
307	308	4.154195	GTCCTGTTGTCATGCGAAATTACT	59.846	41.667	0.00	0.00	0.00	2.24
308	309	4.083537	TGTCCTGTTGTCATGCGAAATTAC	60.084	41.667	0.00	0.00	0.00	1.89
309	310	4.068599	TGTCCTGTTGTCATGCGAAATTA	58.931	39.130	0.00	0.00	0.00	1.40
310	311	2.884012	TGTCCTGTTGTCATGCGAAATT	59.116	40.909	0.00	0.00	0.00	1.82
311	312	2.503331	TGTCCTGTTGTCATGCGAAAT	58.497	42.857	0.00	0.00	0.00	2.17
312	313	1.960417	TGTCCTGTTGTCATGCGAAA	58.040	45.000	0.00	0.00	0.00	3.46
313	314	1.960417	TTGTCCTGTTGTCATGCGAA	58.040	45.000	0.00	0.00	0.00	4.70
314	315	1.960417	TTTGTCCTGTTGTCATGCGA	58.040	45.000	0.00	0.00	0.00	5.10
315	316	2.772568	TTTTGTCCTGTTGTCATGCG	57.227	45.000	0.00	0.00	0.00	4.73
335	336	7.394016	GGAAAATATGGGATGTTGAGGTTTTT	58.606	34.615	0.00	0.00	0.00	1.94
336	337	6.070251	GGGAAAATATGGGATGTTGAGGTTTT	60.070	38.462	0.00	0.00	0.00	2.43
337	338	5.425217	GGGAAAATATGGGATGTTGAGGTTT	59.575	40.000	0.00	0.00	0.00	3.27
338	339	4.962362	GGGAAAATATGGGATGTTGAGGTT	59.038	41.667	0.00	0.00	0.00	3.50
339	340	4.232820	AGGGAAAATATGGGATGTTGAGGT	59.767	41.667	0.00	0.00	0.00	3.85
340	341	4.808042	AGGGAAAATATGGGATGTTGAGG	58.192	43.478	0.00	0.00	0.00	3.86
341	342	5.699143	AGAGGGAAAATATGGGATGTTGAG	58.301	41.667	0.00	0.00	0.00	3.02
342	343	5.732331	AGAGGGAAAATATGGGATGTTGA	57.268	39.130	0.00	0.00	0.00	3.18
343	344	7.290061	TCTAAGAGGGAAAATATGGGATGTTG	58.710	38.462	0.00	0.00	0.00	3.33
344	345	7.465900	TCTAAGAGGGAAAATATGGGATGTT	57.534	36.000	0.00	0.00	0.00	2.71
345	346	7.465900	TTCTAAGAGGGAAAATATGGGATGT	57.534	36.000	0.00	0.00	0.00	3.06
346	347	8.800332	CAATTCTAAGAGGGAAAATATGGGATG	58.200	37.037	0.00	0.00	0.00	3.51
347	348	8.514504	ACAATTCTAAGAGGGAAAATATGGGAT	58.485	33.333	0.00	0.00	0.00	3.85
348	349	7.882755	ACAATTCTAAGAGGGAAAATATGGGA	58.117	34.615	0.00	0.00	0.00	4.37
349	350	8.539117	AACAATTCTAAGAGGGAAAATATGGG	57.461	34.615	0.00	0.00	0.00	4.00
352	353	9.768215	TGGAAACAATTCTAAGAGGGAAAATAT	57.232	29.630	0.00	0.00	37.44	1.28
371	372	4.686554	CCACGTTTGAAAGTTTTGGAAACA	59.313	37.500	14.29	0.00	39.83	2.83
372	373	4.687018	ACCACGTTTGAAAGTTTTGGAAAC	59.313	37.500	8.42	8.18	0.00	2.78
373	374	4.884247	ACCACGTTTGAAAGTTTTGGAAA	58.116	34.783	8.42	0.00	0.00	3.13
374	375	4.522722	ACCACGTTTGAAAGTTTTGGAA	57.477	36.364	8.42	0.00	0.00	3.53
375	376	4.522722	AACCACGTTTGAAAGTTTTGGA	57.477	36.364	8.42	0.00	0.00	3.53
376	377	4.092237	GGAAACCACGTTTGAAAGTTTTGG	59.908	41.667	1.04	1.04	35.77	3.28
377	378	4.686554	TGGAAACCACGTTTGAAAGTTTTG	59.313	37.500	0.00	0.00	35.77	2.44
378	379	4.884247	TGGAAACCACGTTTGAAAGTTTT	58.116	34.783	0.00	0.00	35.77	2.43
379	380	4.522722	TGGAAACCACGTTTGAAAGTTT	57.477	36.364	0.00	0.00	35.77	2.66
380	381	4.522722	TTGGAAACCACGTTTGAAAGTT	57.477	36.364	0.00	0.00	35.77	2.66
381	382	4.239304	GTTTGGAAACCACGTTTGAAAGT	58.761	39.130	0.00	0.00	35.77	2.66
382	383	4.833469	GTTTGGAAACCACGTTTGAAAG	57.167	40.909	0.00	0.00	35.77	2.62
394	395	1.204813	CGCCGTACGGTTTGGAAAC	59.795	57.895	33.34	14.43	38.44	2.78
395	396	0.813210	AACGCCGTACGGTTTGGAAA	60.813	50.000	33.34	0.00	40.34	3.13
396	397	1.227497	AACGCCGTACGGTTTGGAA	60.227	52.632	33.34	0.00	40.34	3.53
397	398	1.955157	CAACGCCGTACGGTTTGGA	60.955	57.895	33.34	0.00	40.34	3.53
398	399	2.552268	CAACGCCGTACGGTTTGG	59.448	61.111	33.34	21.99	40.34	3.28
399	400	2.161703	GACCAACGCCGTACGGTTTG	62.162	60.000	33.34	31.04	40.34	2.93
400	401	1.955663	GACCAACGCCGTACGGTTT	60.956	57.895	33.34	23.67	40.34	3.27
401	402	2.356194	GACCAACGCCGTACGGTT	60.356	61.111	33.34	19.34	40.34	4.44
405	406	2.219562	CGATCGACCAACGCCGTAC	61.220	63.158	10.26	0.00	42.26	3.67
406	407	2.100797	CGATCGACCAACGCCGTA	59.899	61.111	10.26	0.00	42.26	4.02
407	408	3.740397	TCGATCGACCAACGCCGT	61.740	61.111	15.15	0.00	42.26	5.68
408	409	3.245315	GTCGATCGACCAACGCCG	61.245	66.667	33.06	0.00	42.26	6.46
409	410	3.245315	CGTCGATCGACCAACGCC	61.245	66.667	35.48	14.92	41.76	5.68
410	411	2.202388	TCGTCGATCGACCAACGC	60.202	61.111	35.48	15.60	44.01	4.84
411	412	1.582937	CCTCGTCGATCGACCAACG	60.583	63.158	35.48	26.65	44.01	4.10
412	413	0.522915	GTCCTCGTCGATCGACCAAC	60.523	60.000	35.48	24.87	44.01	3.77
413	414	1.651240	GGTCCTCGTCGATCGACCAA	61.651	60.000	35.48	24.86	44.01	3.67
414	415	2.110967	GGTCCTCGTCGATCGACCA	61.111	63.158	35.48	25.99	44.01	4.02
415	416	2.049475	CTGGTCCTCGTCGATCGACC	62.049	65.000	35.48	24.35	44.01	4.79
416	417	1.352404	CTGGTCCTCGTCGATCGAC	59.648	63.158	33.22	33.22	44.01	4.20
417	418	1.818363	CCTGGTCCTCGTCGATCGA	60.818	63.158	15.15	15.15	46.83	3.59
418	419	2.716244	CCTGGTCCTCGTCGATCG	59.284	66.667	9.36	9.36	41.41	3.69
419	420	2.413765	GCCTGGTCCTCGTCGATC	59.586	66.667	0.00	0.00	0.00	3.69
420	421	3.518998	CGCCTGGTCCTCGTCGAT	61.519	66.667	0.00	0.00	0.00	3.59
423	424	4.803426	CAGCGCCTGGTCCTCGTC	62.803	72.222	2.29	0.00	0.00	4.20
440	441	4.103103	GTTTCCGGCGAGCAAGGC	62.103	66.667	9.30	0.00	0.00	4.35
492	494	0.179169	GTCGTCTGTAACTCGGGCTC	60.179	60.000	0.00	0.00	0.00	4.70
506	508	1.083209	GTGGCGGTTTTTCGTCGTC	60.083	57.895	0.00	0.00	37.60	4.20
525	527	1.612462	GGCTGCCCCCGTATTATAACC	60.612	57.143	7.66	0.00	0.00	2.85
574	592	2.430921	GGTGCGTGTCGTCTCCTG	60.431	66.667	0.00	0.00	0.00	3.86
575	593	3.681835	GGGTGCGTGTCGTCTCCT	61.682	66.667	0.00	0.00	0.00	3.69
576	594	4.736896	GGGGTGCGTGTCGTCTCC	62.737	72.222	0.00	0.00	0.00	3.71
577	595	3.628280	GAGGGGTGCGTGTCGTCTC	62.628	68.421	0.00	0.00	0.00	3.36
578	596	3.681835	GAGGGGTGCGTGTCGTCT	61.682	66.667	0.00	0.00	0.00	4.18
580	598	3.681835	GAGAGGGGTGCGTGTCGT	61.682	66.667	0.00	0.00	0.00	4.34
581	599	3.343788	GAGAGAGGGGTGCGTGTCG	62.344	68.421	0.00	0.00	0.00	4.35
582	600	2.574399	GAGAGAGGGGTGCGTGTC	59.426	66.667	0.00	0.00	0.00	3.67
583	601	2.997897	GGAGAGAGGGGTGCGTGT	60.998	66.667	0.00	0.00	0.00	4.49
584	602	3.775654	GGGAGAGAGGGGTGCGTG	61.776	72.222	0.00	0.00	0.00	5.34
630	648	2.020016	CGCCGAATTTCTCACGCG	59.980	61.111	3.53	3.53	36.48	6.01
636	654	2.438434	CTGCCCCGCCGAATTTCT	60.438	61.111	0.00	0.00	0.00	2.52
637	655	2.437716	TCTGCCCCGCCGAATTTC	60.438	61.111	0.00	0.00	0.00	2.17
638	656	2.438434	CTCTGCCCCGCCGAATTT	60.438	61.111	0.00	0.00	0.00	1.82
639	657	4.489771	CCTCTGCCCCGCCGAATT	62.490	66.667	0.00	0.00	0.00	2.17
641	659	2.932569	TATACCTCTGCCCCGCCGAA	62.933	60.000	0.00	0.00	0.00	4.30
645	663	3.629142	AAATATATACCTCTGCCCCGC	57.371	47.619	0.00	0.00	0.00	6.13
648	666	7.021998	AGGAGAAAAATATATACCTCTGCCC	57.978	40.000	6.03	0.00	0.00	5.36
649	667	7.912719	AGAGGAGAAAAATATATACCTCTGCC	58.087	38.462	12.66	8.23	46.95	4.85
671	714	1.830477	CCTCTCCCCTCACTTTCAGAG	59.170	57.143	0.00	0.00	0.00	3.35
683	729	1.596496	TGATTTCTTCCCCTCTCCCC	58.404	55.000	0.00	0.00	0.00	4.81
767	816	2.479650	GACGACCACGACGAGGAG	59.520	66.667	18.62	13.07	42.66	3.69
770	819	3.324099	CTGGGACGACCACGACGAG	62.324	68.421	6.20	0.00	46.80	4.18
792	842	0.905337	CGAGGAAGGTGGGAGGAAGT	60.905	60.000	0.00	0.00	0.00	3.01
802	852	4.436998	CGAAGCGGCGAGGAAGGT	62.437	66.667	12.98	0.00	0.00	3.50
824	874	0.915364	CAGGAAGGAGAAGGGAAGGG	59.085	60.000	0.00	0.00	0.00	3.95
854	904	1.630878	GGGAGGAGCCAAGAAGAAGAA	59.369	52.381	0.00	0.00	38.95	2.52
891	946	4.157958	GCAGAGCGCGCCAAGAAG	62.158	66.667	30.33	13.22	0.00	2.85
973	1047	4.499116	ATGGAGGGAGGGTCGGGG	62.499	72.222	0.00	0.00	0.00	5.73
974	1048	2.844839	GATGGAGGGAGGGTCGGG	60.845	72.222	0.00	0.00	0.00	5.14
975	1049	2.844839	GGATGGAGGGAGGGTCGG	60.845	72.222	0.00	0.00	0.00	4.79
976	1050	3.227276	CGGATGGAGGGAGGGTCG	61.227	72.222	0.00	0.00	0.00	4.79
977	1051	3.551407	GCGGATGGAGGGAGGGTC	61.551	72.222	0.00	0.00	0.00	4.46
980	1054	3.610669	CTCGCGGATGGAGGGAGG	61.611	72.222	6.13	0.00	42.63	4.30
1108	1185	9.435688	AATAAAACAAGATAAAAATGAGTGGGC	57.564	29.630	0.00	0.00	0.00	5.36
1129	1206	7.570607	ACATGGAAGGGGGCAATAATAAATAAA	59.429	33.333	0.00	0.00	0.00	1.40
1135	1212	3.465210	TCACATGGAAGGGGGCAATAATA	59.535	43.478	0.00	0.00	0.00	0.98
1136	1213	2.247111	TCACATGGAAGGGGGCAATAAT	59.753	45.455	0.00	0.00	0.00	1.28
1137	1214	1.643286	TCACATGGAAGGGGGCAATAA	59.357	47.619	0.00	0.00	0.00	1.40
1138	1215	1.215173	CTCACATGGAAGGGGGCAATA	59.785	52.381	0.00	0.00	0.00	1.90
1139	1216	0.032813	CTCACATGGAAGGGGGCAAT	60.033	55.000	0.00	0.00	0.00	3.56
1140	1217	1.139498	TCTCACATGGAAGGGGGCAA	61.139	55.000	0.00	0.00	0.00	4.52
1160	1237	7.037945	GCCCCAGAGACTAGGATAAAATATTCT	60.038	40.741	0.00	0.00	0.00	2.40
1185	1262	1.599047	TGTAGAGGCCTCTGCAAGC	59.401	57.895	41.04	25.83	46.60	4.01
1190	1267	2.136298	TCAGTCTGTAGAGGCCTCTG	57.864	55.000	40.16	25.96	40.71	3.35
1191	1268	3.396685	AATCAGTCTGTAGAGGCCTCT	57.603	47.619	36.62	36.62	43.40	3.69
1241	1325	6.449698	CCACAGAGATTGCTGTAACAAAATT	58.550	36.000	0.00	0.00	46.80	1.82
1243	1327	4.261572	GCCACAGAGATTGCTGTAACAAAA	60.262	41.667	0.00	0.00	46.80	2.44
1247	1331	1.740025	GGCCACAGAGATTGCTGTAAC	59.260	52.381	0.00	0.00	46.80	2.50
1252	1336	2.226962	AATTGGCCACAGAGATTGCT	57.773	45.000	3.88	0.00	0.00	3.91
1253	1337	3.323751	AAAATTGGCCACAGAGATTGC	57.676	42.857	3.88	0.00	0.00	3.56
1271	1355	9.598517	AGAGATTGCTGTGACAAAATTTAAAAA	57.401	25.926	0.00	0.00	32.27	1.94
1272	1356	9.033481	CAGAGATTGCTGTGACAAAATTTAAAA	57.967	29.630	0.00	0.00	37.60	1.52
1273	1357	8.196771	ACAGAGATTGCTGTGACAAAATTTAAA	58.803	29.630	0.00	0.00	46.72	1.52
1274	1358	7.715657	ACAGAGATTGCTGTGACAAAATTTAA	58.284	30.769	0.00	0.00	46.72	1.52
1275	1359	7.275888	ACAGAGATTGCTGTGACAAAATTTA	57.724	32.000	0.00	0.00	46.72	1.40
1276	1360	6.152932	ACAGAGATTGCTGTGACAAAATTT	57.847	33.333	0.00	0.00	46.72	1.82
1277	1361	5.779529	ACAGAGATTGCTGTGACAAAATT	57.220	34.783	0.00	0.00	46.72	1.82
1347	1431	2.313643	GAGGGGATTAGGGGGAAAAACA	59.686	50.000	0.00	0.00	0.00	2.83
1348	1432	2.358932	GGAGGGGATTAGGGGGAAAAAC	60.359	54.545	0.00	0.00	0.00	2.43
1353	1437	1.955552	TGGGAGGGGATTAGGGGGA	60.956	63.158	0.00	0.00	0.00	4.81
1354	1438	1.464198	CTGGGAGGGGATTAGGGGG	60.464	68.421	0.00	0.00	0.00	5.40
1355	1439	0.328548	AACTGGGAGGGGATTAGGGG	60.329	60.000	0.00	0.00	0.00	4.79
1356	1440	1.608425	AAACTGGGAGGGGATTAGGG	58.392	55.000	0.00	0.00	0.00	3.53
1370	1454	2.493035	GCCATCCCAAACCAAAAACTG	58.507	47.619	0.00	0.00	0.00	3.16
1409	1497	8.410912	CACATGAATGGAATATCACAGTTGAAT	58.589	33.333	0.00	0.00	34.61	2.57
1419	1507	3.570975	TGCAGCCACATGAATGGAATATC	59.429	43.478	6.54	0.00	43.02	1.63
1436	1524	5.987953	TGAACAGAGATACATATTCTGCAGC	59.012	40.000	9.47	0.00	41.52	5.25
1439	1527	8.774890	ATGATGAACAGAGATACATATTCTGC	57.225	34.615	1.96	0.00	41.52	4.26
1448	1536	7.137426	GCCAAATCAATGATGAACAGAGATAC	58.863	38.462	0.00	0.00	39.49	2.24
1491	1579	6.943718	GCATGGAGAGGATAACTACTAGTACT	59.056	42.308	0.00	0.00	0.00	2.73
1492	1580	6.943718	AGCATGGAGAGGATAACTACTAGTAC	59.056	42.308	0.00	0.00	0.00	2.73
1495	1583	5.336372	GCAGCATGGAGAGGATAACTACTAG	60.336	48.000	0.00	0.00	35.86	2.57
1497	1585	3.323403	GCAGCATGGAGAGGATAACTACT	59.677	47.826	0.00	0.00	35.86	2.57
1524	1612	4.465632	AGTATGTGCGTTCCAATACAGA	57.534	40.909	0.00	0.00	0.00	3.41
1534	1622	6.989759	TCATATATTGGTGAAGTATGTGCGTT	59.010	34.615	0.00	0.00	0.00	4.84
1535	1623	6.521162	TCATATATTGGTGAAGTATGTGCGT	58.479	36.000	0.00	0.00	0.00	5.24
1536	1624	7.601073	ATCATATATTGGTGAAGTATGTGCG	57.399	36.000	0.00	0.00	0.00	5.34
1551	1639	5.522460	GCCCGTACGCACATAATCATATATT	59.478	40.000	10.49	0.00	0.00	1.28
1584	1672	4.233123	CATGTATAGGCATGCAAGTTGG	57.767	45.455	21.36	0.00	39.59	3.77
1635	1723	5.287170	CGATCAGCAGAAGTGATTTTCAA	57.713	39.130	0.00	0.00	34.69	2.69
1664	1752	1.391157	TTCTGCACTTGGTGGTTGGC	61.391	55.000	0.00	0.00	33.64	4.52
1695	1783	9.515020	ACTAATCGGCACATAAAACATAATTTG	57.485	29.630	0.00	0.00	0.00	2.32
1698	1786	9.730420	GAAACTAATCGGCACATAAAACATAAT	57.270	29.630	0.00	0.00	0.00	1.28
1705	1793	9.005777	ACTAAAAGAAACTAATCGGCACATAAA	57.994	29.630	0.00	0.00	0.00	1.40
1706	1794	8.556213	ACTAAAAGAAACTAATCGGCACATAA	57.444	30.769	0.00	0.00	0.00	1.90
1707	1795	9.826574	ATACTAAAAGAAACTAATCGGCACATA	57.173	29.630	0.00	0.00	0.00	2.29
1709	1797	7.065324	CCATACTAAAAGAAACTAATCGGCACA	59.935	37.037	0.00	0.00	0.00	4.57
1710	1798	7.279313	TCCATACTAAAAGAAACTAATCGGCAC	59.721	37.037	0.00	0.00	0.00	5.01
1711	1799	7.332557	TCCATACTAAAAGAAACTAATCGGCA	58.667	34.615	0.00	0.00	0.00	5.69
1712	1800	7.781548	TCCATACTAAAAGAAACTAATCGGC	57.218	36.000	0.00	0.00	0.00	5.54
1728	1816	9.739276	AGAAATGAAACAAGTGAATCCATACTA	57.261	29.630	0.00	0.00	0.00	1.82
1729	1817	8.641498	AGAAATGAAACAAGTGAATCCATACT	57.359	30.769	0.00	0.00	0.00	2.12
1736	1824	7.479980	TCACGAAAGAAATGAAACAAGTGAAT	58.520	30.769	0.00	0.00	32.85	2.57
1737	1825	6.847400	TCACGAAAGAAATGAAACAAGTGAA	58.153	32.000	0.00	0.00	32.85	3.18
1758	1846	7.335924	TGGGCAAGATTGTTACTACTTATTCAC	59.664	37.037	0.00	0.00	0.00	3.18
1766	1854	6.509418	TCATTTGGGCAAGATTGTTACTAC	57.491	37.500	0.00	0.00	0.00	2.73
1769	1857	5.971202	CGTATCATTTGGGCAAGATTGTTAC	59.029	40.000	0.00	0.00	0.00	2.50
1775	1864	7.581213	TTAAATCGTATCATTTGGGCAAGAT	57.419	32.000	0.00	0.00	0.00	2.40
1781	1870	5.856455	GCCGAATTAAATCGTATCATTTGGG	59.144	40.000	11.73	0.00	41.16	4.12
1790	1879	1.770061	AGGGGGCCGAATTAAATCGTA	59.230	47.619	11.73	0.00	41.16	3.43
1792	1881	1.235724	GAGGGGGCCGAATTAAATCG	58.764	55.000	5.94	5.94	42.37	3.34
1793	1882	2.358322	TGAGGGGGCCGAATTAAATC	57.642	50.000	0.00	0.00	0.00	2.17
1794	1883	2.024369	AGTTGAGGGGGCCGAATTAAAT	60.024	45.455	0.00	0.00	0.00	1.40
1829	1918	8.066595	GCATTTGATGATGTGAGTTACTATGAC	58.933	37.037	0.00	0.00	0.00	3.06
1832	1921	8.687292	ATGCATTTGATGATGTGAGTTACTAT	57.313	30.769	0.00	0.00	0.00	2.12
1869	1958	9.499479	CTAGATGGTGATGTTTCTGCTATTTAT	57.501	33.333	0.00	0.00	0.00	1.40
1870	1959	8.486210	ACTAGATGGTGATGTTTCTGCTATTTA	58.514	33.333	0.00	0.00	0.00	1.40
1871	1960	7.341805	ACTAGATGGTGATGTTTCTGCTATTT	58.658	34.615	0.00	0.00	0.00	1.40
1874	1963	5.939764	ACTAGATGGTGATGTTTCTGCTA	57.060	39.130	0.00	0.00	0.00	3.49
1876	1965	5.698545	GGATACTAGATGGTGATGTTTCTGC	59.301	44.000	0.00	0.00	0.00	4.26
1877	1966	6.820335	TGGATACTAGATGGTGATGTTTCTG	58.180	40.000	0.00	0.00	37.61	3.02
1883	1972	8.127150	TCAACTATGGATACTAGATGGTGATG	57.873	38.462	0.00	0.00	37.61	3.07
1885	1974	7.255977	GCTTCAACTATGGATACTAGATGGTGA	60.256	40.741	0.00	0.00	37.61	4.02
1892	1986	5.221521	TGCAGGCTTCAACTATGGATACTAG	60.222	44.000	0.00	0.00	37.61	2.57
1898	1992	1.679944	GCTGCAGGCTTCAACTATGGA	60.680	52.381	17.12	0.00	38.06	3.41
1924	2018	7.231607	GCACATGCATAATAATTAGCAAATGC	58.768	34.615	14.77	14.77	41.43	3.56
1949	2043	0.803768	CTTCGACGCAGACATCCCTG	60.804	60.000	0.00	0.00	37.23	4.45
2114	2211	0.457851	CTCGGCGAAGGTGAAGATCT	59.542	55.000	12.13	0.00	0.00	2.75
2342	2446	9.958180	TCATATCACTGAAATTCCTTGTAGAAA	57.042	29.630	0.00	0.00	0.00	2.52
2389	2589	5.966742	AAACTGAAATCTGCCTAAGAACC	57.033	39.130	0.00	0.00	38.79	3.62
2459	2666	2.914695	ATGTGGCAATTGCAACTTGT	57.085	40.000	32.46	18.80	45.12	3.16
2690	2897	5.186021	ACACATAAGGACTAAGAGAGTGGTG	59.814	44.000	0.00	0.00	39.06	4.17
2719	2930	5.933617	AGAGCAGAGTATTGGAATATGCAA	58.066	37.500	0.00	0.00	30.57	4.08
2731	2942	6.526526	TCGATAACTAGTGAGAGCAGAGTAT	58.473	40.000	0.00	0.00	0.00	2.12
2747	2958	6.183360	GCATAAATATGAAGCGCTCGATAACT	60.183	38.462	12.06	4.49	35.75	2.24
2753	2964	5.709011	ATAGCATAAATATGAAGCGCTCG	57.291	39.130	12.06	0.00	35.75	5.03
2755	2966	7.388776	TCAAGAATAGCATAAATATGAAGCGCT	59.611	33.333	2.64	2.64	35.75	5.92
2756	2967	7.479916	GTCAAGAATAGCATAAATATGAAGCGC	59.520	37.037	0.00	0.00	35.75	5.92
2757	2968	8.498358	TGTCAAGAATAGCATAAATATGAAGCG	58.502	33.333	4.63	0.00	35.75	4.68
2792	3003	5.801531	AGCAGTACCGATCAATTATGGTA	57.198	39.130	0.00	0.00	35.93	3.25
2793	3004	4.689612	AGCAGTACCGATCAATTATGGT	57.310	40.909	0.00	0.00	38.51	3.55
2794	3005	7.361201	CCAATAAGCAGTACCGATCAATTATGG	60.361	40.741	0.00	0.00	0.00	2.74
2795	3006	7.521529	CCAATAAGCAGTACCGATCAATTATG	58.478	38.462	0.00	0.00	0.00	1.90
2796	3007	6.149474	GCCAATAAGCAGTACCGATCAATTAT	59.851	38.462	0.00	0.00	0.00	1.28
2797	3008	5.468746	GCCAATAAGCAGTACCGATCAATTA	59.531	40.000	0.00	0.00	0.00	1.40
2798	3009	4.275936	GCCAATAAGCAGTACCGATCAATT	59.724	41.667	0.00	0.00	0.00	2.32
2799	3010	3.815401	GCCAATAAGCAGTACCGATCAAT	59.185	43.478	0.00	0.00	0.00	2.57
2800	3011	3.118408	AGCCAATAAGCAGTACCGATCAA	60.118	43.478	0.00	0.00	34.23	2.57
2801	3012	2.434336	AGCCAATAAGCAGTACCGATCA	59.566	45.455	0.00	0.00	34.23	2.92
2802	3013	2.802816	CAGCCAATAAGCAGTACCGATC	59.197	50.000	0.00	0.00	34.23	3.69
2803	3014	2.434336	TCAGCCAATAAGCAGTACCGAT	59.566	45.455	0.00	0.00	34.23	4.18
2804	3015	1.828595	TCAGCCAATAAGCAGTACCGA	59.171	47.619	0.00	0.00	34.23	4.69
2805	3016	1.933853	GTCAGCCAATAAGCAGTACCG	59.066	52.381	0.00	0.00	34.23	4.02
2822	3033	6.149308	CAGCACAATACAAATTCCTAGTGTCA	59.851	38.462	0.00	0.00	0.00	3.58
2906	3118	8.616076	AGAGAAATGCATAACGAAAATCTTAGG	58.384	33.333	0.00	0.00	0.00	2.69
2957	3169	5.809001	AGGAAATTCACTTCAGACTGCATA	58.191	37.500	0.00	0.00	0.00	3.14
3117	3329	0.030101	TTTGAAAAAGGCCGTCTGCG	59.970	50.000	0.00	0.00	42.61	5.18
3136	3349	8.478877	AGGAGAACTGTTTCAGATATTTATCGT	58.521	33.333	3.70	0.00	37.76	3.73
3171	3386	5.833131	AGTTGGCATAAAGAGGAAAAACAGA	59.167	36.000	0.00	0.00	0.00	3.41
3251	3466	7.112452	TGGTGCTTGATATATAGTATGCGAT	57.888	36.000	0.00	0.00	0.00	4.58
3348	3563	1.710013	CAGCAGCAAGAATTTGGCTG	58.290	50.000	17.54	17.54	40.60	4.85
3490	3709	8.044309	TGCATTAGTACCATAACAGAGCTAAAA	58.956	33.333	0.00	0.00	0.00	1.52
3499	3718	8.518430	AACATCAATGCATTAGTACCATAACA	57.482	30.769	12.53	0.00	0.00	2.41
3503	3722	8.922931	TGATAACATCAATGCATTAGTACCAT	57.077	30.769	12.53	2.19	36.11	3.55
3514	3733	3.152341	CCCCTCCTGATAACATCAATGC	58.848	50.000	0.00	0.00	39.11	3.56
3565	3794	1.202463	ACCGATGAGAATCTTCAGCCG	60.202	52.381	0.00	0.00	39.06	5.52
3660	3889	7.175119	TCAATAGCGCATACTGAATCTAGTAGT	59.825	37.037	11.47	0.00	36.66	2.73
3927	4156	1.594862	GCTACGAACAGATGATGCACC	59.405	52.381	0.00	0.00	0.00	5.01
3943	4173	3.005472	TGGTCAGTGTTAGTCAGTGCTAC	59.995	47.826	0.00	0.00	44.56	3.58
3953	4183	4.095483	GGAATGCAAGATGGTCAGTGTTAG	59.905	45.833	0.00	0.00	0.00	2.34
4115	4349	2.363147	GTCAGCCTCCTCCGGTCT	60.363	66.667	0.00	0.00	0.00	3.85
4256	4490	3.839642	GATCTGCTCGAGCGCCTCC	62.840	68.421	30.75	15.50	45.83	4.30
4468	4707	1.338011	GGAAACAATGGCATGGTGTGG	60.338	52.381	8.59	0.00	0.00	4.17
4469	4708	1.338011	GGGAAACAATGGCATGGTGTG	60.338	52.381	8.59	1.42	0.00	3.82
4477	4716	0.671251	TGACAACGGGAAACAATGGC	59.329	50.000	0.00	0.00	0.00	4.40
4749	8853	4.095632	TGAGTCAAATGTTTGCGTTCTTCA	59.904	37.500	0.00	0.00	38.05	3.02
4812	8934	8.776470	CATGATTTTCAGCAACCAAACTAAAAT	58.224	29.630	0.00	0.00	0.00	1.82
4855	8977	4.154918	CAGAACCATGCTTGAAAGTCTACC	59.845	45.833	0.22	0.00	0.00	3.18
4858	8980	3.825328	ACAGAACCATGCTTGAAAGTCT	58.175	40.909	0.22	0.00	0.00	3.24
4866	8988	3.290710	ACACTTGAACAGAACCATGCTT	58.709	40.909	0.00	0.00	0.00	3.91
4868	8990	3.066621	TCAACACTTGAACAGAACCATGC	59.933	43.478	0.00	0.00	36.59	4.06
4887	9009	5.827797	AGCAGGAAAATGTACAGAACTTCAA	59.172	36.000	0.33	0.00	0.00	2.69
4912	9034	6.042143	TGATTCAAAGGTTTGCTTTCTTCAC	58.958	36.000	0.00	0.00	38.05	3.18
5004	9128	6.413783	AATGTTAAAACACCCCTTTTCGAT	57.586	33.333	0.00	0.00	42.51	3.59
5016	9140	3.637229	TCCTGCCGGAAAATGTTAAAACA	59.363	39.130	5.05	0.00	38.82	2.83
5091	9215	9.797642	TGTATCATTGCATTGATAGGTAGAATT	57.202	29.630	24.60	5.66	38.83	2.17
5092	9216	9.224267	GTGTATCATTGCATTGATAGGTAGAAT	57.776	33.333	24.60	6.26	38.83	2.40
5093	9217	8.210265	TGTGTATCATTGCATTGATAGGTAGAA	58.790	33.333	24.60	7.47	38.83	2.10
5094	9218	7.734942	TGTGTATCATTGCATTGATAGGTAGA	58.265	34.615	24.60	13.70	38.83	2.59
5095	9219	7.967890	TGTGTATCATTGCATTGATAGGTAG	57.032	36.000	24.60	0.00	38.83	3.18
5096	9220	7.041167	GCTTGTGTATCATTGCATTGATAGGTA	60.041	37.037	24.60	14.78	38.83	3.08
5097	9221	6.238842	GCTTGTGTATCATTGCATTGATAGGT	60.239	38.462	24.60	8.97	38.83	3.08
5098	9222	6.147581	GCTTGTGTATCATTGCATTGATAGG	58.852	40.000	24.60	12.05	38.83	2.57
5099	9223	6.016527	AGGCTTGTGTATCATTGCATTGATAG	60.017	38.462	24.60	17.71	38.83	2.08
5100	9224	5.829391	AGGCTTGTGTATCATTGCATTGATA	59.171	36.000	21.66	21.66	37.51	2.15
5101	9225	4.647853	AGGCTTGTGTATCATTGCATTGAT	59.352	37.500	23.42	23.42	39.60	2.57
5102	9226	4.018490	AGGCTTGTGTATCATTGCATTGA	58.982	39.130	13.30	13.30	0.00	2.57
5103	9227	4.380841	AGGCTTGTGTATCATTGCATTG	57.619	40.909	2.08	2.08	0.00	2.82
5104	9228	5.410355	AAAGGCTTGTGTATCATTGCATT	57.590	34.783	0.00	0.00	33.84	3.56
5105	9229	5.172934	CAAAAGGCTTGTGTATCATTGCAT	58.827	37.500	9.35	0.00	0.00	3.96
5106	9230	4.558178	CAAAAGGCTTGTGTATCATTGCA	58.442	39.130	9.35	0.00	0.00	4.08
5107	9231	3.368843	GCAAAAGGCTTGTGTATCATTGC	59.631	43.478	18.33	14.75	40.25	3.56
5108	9232	3.609373	CGCAAAAGGCTTGTGTATCATTG	59.391	43.478	18.33	9.12	41.67	2.82
5109	9233	3.255642	ACGCAAAAGGCTTGTGTATCATT	59.744	39.130	18.33	0.00	40.85	2.57
5110	9234	2.819608	ACGCAAAAGGCTTGTGTATCAT	59.180	40.909	18.33	0.00	40.85	2.45
5111	9235	2.226330	ACGCAAAAGGCTTGTGTATCA	58.774	42.857	18.33	0.00	40.85	2.15
5112	9236	2.989422	ACGCAAAAGGCTTGTGTATC	57.011	45.000	18.33	1.67	40.85	2.24
5114	9238	3.120477	CGAATACGCAAAAGGCTTGTGTA	60.120	43.478	18.33	15.63	45.65	2.90
5115	9239	2.350388	CGAATACGCAAAAGGCTTGTGT	60.350	45.455	18.33	13.99	44.29	3.72
5116	9240	2.241722	CGAATACGCAAAAGGCTTGTG	58.758	47.619	13.25	13.25	41.67	3.33
5117	9241	2.611974	CGAATACGCAAAAGGCTTGT	57.388	45.000	0.00	0.00	41.67	3.16
5141	9265	4.823989	CCACCATCACTTTCTGTCTCTTTT	59.176	41.667	0.00	0.00	0.00	2.27
5142	9266	4.103153	TCCACCATCACTTTCTGTCTCTTT	59.897	41.667	0.00	0.00	0.00	2.52
5144	9268	3.007398	GTCCACCATCACTTTCTGTCTCT	59.993	47.826	0.00	0.00	0.00	3.10
5148	9272	3.864789	AAGTCCACCATCACTTTCTGT	57.135	42.857	0.00	0.00	27.81	3.41
5182	9306	3.982516	TCCAGGAGTAATCTGCAGTAGT	58.017	45.455	14.67	2.21	34.40	2.73
5185	9309	3.378512	TCATCCAGGAGTAATCTGCAGT	58.621	45.455	14.67	0.00	34.40	4.40
5188	9312	3.137533	GCTTCATCCAGGAGTAATCTGC	58.862	50.000	0.00	0.00	0.00	4.26
5355	9492	5.220739	CCTCTAAGCGTCCTCAAATCATTTG	60.221	44.000	3.46	3.46	41.96	2.32

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.