Multiple sequence alignment - TraesCS7A01G549000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G549000 chr7A 100.000 3082 0 0 1 3082 723257370 723254289 0.000000e+00 5692.0
1 TraesCS7A01G549000 chr7D 89.687 1406 74 28 982 2353 627315767 627314399 0.000000e+00 1727.0
2 TraesCS7A01G549000 chr7D 93.069 303 20 1 2399 2701 627314399 627314098 2.820000e-120 442.0
3 TraesCS7A01G549000 chr7D 86.400 125 10 4 550 671 627316621 627316501 2.490000e-26 130.0
4 TraesCS7A01G549000 chr7B 87.934 1384 57 51 990 2311 728699535 728700870 0.000000e+00 1530.0
5 TraesCS7A01G549000 chr7B 89.739 1150 62 24 982 2087 728288874 728287737 0.000000e+00 1419.0
6 TraesCS7A01G549000 chr7B 88.014 851 77 13 152 987 728698375 728699215 0.000000e+00 983.0
7 TraesCS7A01G549000 chr7B 90.601 383 29 6 2698 3077 596984911 596985289 4.590000e-138 501.0
8 TraesCS7A01G549000 chr7B 83.094 278 26 9 2399 2658 728700917 728701191 1.850000e-57 233.0
9 TraesCS7A01G549000 chr5D 91.451 386 27 4 2699 3082 423275493 423275112 2.720000e-145 525.0
10 TraesCS7A01G549000 chr5D 91.192 386 28 5 2699 3082 551893401 551893782 1.270000e-143 520.0
11 TraesCS7A01G549000 chr5D 91.351 370 30 2 2698 3065 559069187 559069556 3.550000e-139 505.0
12 TraesCS7A01G549000 chr5D 90.130 385 31 5 2697 3078 407317357 407316977 7.680000e-136 494.0
13 TraesCS7A01G549000 chr3B 91.711 374 28 3 2706 3077 779532941 779532569 1.640000e-142 516.0
14 TraesCS7A01G549000 chr3D 91.146 384 27 5 2701 3082 336811519 336811141 5.890000e-142 514.0
15 TraesCS7A01G549000 chr3D 84.000 75 12 0 1173 1247 30409201 30409275 4.260000e-09 73.1
16 TraesCS7A01G549000 chr4A 90.722 388 31 4 2697 3082 600365663 600365279 2.120000e-141 512.0
17 TraesCS7A01G549000 chr5A 90.415 386 27 7 2698 3079 700171348 700171727 1.650000e-137 499.0
18 TraesCS7A01G549000 chr5A 87.931 58 7 0 1145 1202 666525529 666525472 5.510000e-08 69.4
19 TraesCS7A01G549000 chr3A 84.000 75 12 0 1173 1247 42364680 42364754 4.260000e-09 73.1
20 TraesCS7A01G549000 chr4D 87.931 58 7 0 1145 1202 485683639 485683582 5.510000e-08 69.4
21 TraesCS7A01G549000 chr4D 86.207 58 8 0 1145 1202 485764466 485764409 2.570000e-06 63.9
22 TraesCS7A01G549000 chr4B 86.207 58 8 0 1145 1202 619774866 619774809 2.570000e-06 63.9
23 TraesCS7A01G549000 chr1B 100.000 28 0 0 337 364 171125171 171125144 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G549000 chr7A 723254289 723257370 3081 True 5692.000000 5692 100.000000 1 3082 1 chr7A.!!$R1 3081
1 TraesCS7A01G549000 chr7D 627314098 627316621 2523 True 766.333333 1727 89.718667 550 2701 3 chr7D.!!$R1 2151
2 TraesCS7A01G549000 chr7B 728287737 728288874 1137 True 1419.000000 1419 89.739000 982 2087 1 chr7B.!!$R1 1105
3 TraesCS7A01G549000 chr7B 728698375 728701191 2816 False 915.333333 1530 86.347333 152 2658 3 chr7B.!!$F2 2506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.034896 AACACAGGTTGTCTAGCCGG 59.965 55.0 0.00 0.0 37.51 6.13 F
74 75 0.108615 CACAGGTTGTCTAGCCGGAG 60.109 60.0 5.05 0.0 31.52 4.63 F
325 326 0.469331 AGGTCCTGGACTTGACACGA 60.469 55.0 25.01 0.0 33.09 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1056 1522 1.079127 CCAGACTGGTAAGCGGTGG 60.079 63.158 13.84 0.00 31.35 4.61 R
1058 1529 1.207329 GATTCCAGACTGGTAAGCGGT 59.793 52.381 21.06 0.00 39.03 5.68 R
2305 2885 1.227999 AACACACCTTGCACCGATCG 61.228 55.000 8.51 8.51 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.150300 CTGCGAAACTTGTTTCATTATTACAG 57.850 34.615 21.31 13.45 0.00 2.74
26 27 7.644490 TGCGAAACTTGTTTCATTATTACAGT 58.356 30.769 21.31 0.00 0.00 3.55
27 28 8.775527 TGCGAAACTTGTTTCATTATTACAGTA 58.224 29.630 21.31 3.85 0.00 2.74
28 29 9.769093 GCGAAACTTGTTTCATTATTACAGTAT 57.231 29.630 21.31 0.00 0.00 2.12
55 56 8.460831 AAAATAAGTCACAAACACACAGAAAC 57.539 30.769 0.00 0.00 0.00 2.78
56 57 6.751514 ATAAGTCACAAACACACAGAAACA 57.248 33.333 0.00 0.00 0.00 2.83
57 58 4.419522 AGTCACAAACACACAGAAACAC 57.580 40.909 0.00 0.00 0.00 3.32
58 59 3.818210 AGTCACAAACACACAGAAACACA 59.182 39.130 0.00 0.00 0.00 3.72
59 60 4.083324 AGTCACAAACACACAGAAACACAG 60.083 41.667 0.00 0.00 0.00 3.66
60 61 3.190327 TCACAAACACACAGAAACACAGG 59.810 43.478 0.00 0.00 0.00 4.00
61 62 3.057596 CACAAACACACAGAAACACAGGT 60.058 43.478 0.00 0.00 0.00 4.00
62 63 3.572255 ACAAACACACAGAAACACAGGTT 59.428 39.130 0.00 0.00 39.43 3.50
63 64 3.848272 AACACACAGAAACACAGGTTG 57.152 42.857 0.00 0.00 37.30 3.77
64 65 2.790433 ACACACAGAAACACAGGTTGT 58.210 42.857 0.00 0.00 41.74 3.32
65 66 2.747446 ACACACAGAAACACAGGTTGTC 59.253 45.455 0.00 0.00 37.51 3.18
66 67 3.009723 CACACAGAAACACAGGTTGTCT 58.990 45.455 0.00 0.00 37.51 3.41
67 68 4.188462 CACACAGAAACACAGGTTGTCTA 58.812 43.478 0.00 0.00 37.51 2.59
68 69 4.271049 CACACAGAAACACAGGTTGTCTAG 59.729 45.833 0.00 0.00 37.51 2.43
69 70 3.248602 CACAGAAACACAGGTTGTCTAGC 59.751 47.826 0.00 0.00 37.51 3.42
70 71 2.808543 CAGAAACACAGGTTGTCTAGCC 59.191 50.000 0.00 0.00 37.51 3.93
71 72 1.798813 GAAACACAGGTTGTCTAGCCG 59.201 52.381 0.00 0.00 37.51 5.52
72 73 0.034896 AACACAGGTTGTCTAGCCGG 59.965 55.000 0.00 0.00 37.51 6.13
73 74 0.830444 ACACAGGTTGTCTAGCCGGA 60.830 55.000 5.05 0.00 29.79 5.14
74 75 0.108615 CACAGGTTGTCTAGCCGGAG 60.109 60.000 5.05 0.00 31.52 4.63
94 95 7.203255 CGGAGGAAAATAGACAAAAAGAACT 57.797 36.000 0.00 0.00 0.00 3.01
95 96 7.078228 CGGAGGAAAATAGACAAAAAGAACTG 58.922 38.462 0.00 0.00 0.00 3.16
96 97 7.371159 GGAGGAAAATAGACAAAAAGAACTGG 58.629 38.462 0.00 0.00 0.00 4.00
97 98 7.014326 GGAGGAAAATAGACAAAAAGAACTGGT 59.986 37.037 0.00 0.00 0.00 4.00
98 99 8.306313 AGGAAAATAGACAAAAAGAACTGGTT 57.694 30.769 0.00 0.00 0.00 3.67
99 100 9.416284 AGGAAAATAGACAAAAAGAACTGGTTA 57.584 29.630 0.00 0.00 0.00 2.85
106 107 8.981724 AGACAAAAAGAACTGGTTAAAAGAAC 57.018 30.769 0.00 0.00 0.00 3.01
107 108 8.581578 AGACAAAAAGAACTGGTTAAAAGAACA 58.418 29.630 0.00 0.00 0.00 3.18
108 109 8.757164 ACAAAAAGAACTGGTTAAAAGAACAG 57.243 30.769 0.00 0.00 37.01 3.16
109 110 7.817478 ACAAAAAGAACTGGTTAAAAGAACAGG 59.183 33.333 0.00 0.00 35.34 4.00
110 111 7.712204 AAAAGAACTGGTTAAAAGAACAGGA 57.288 32.000 0.00 0.00 35.34 3.86
111 112 6.694877 AAGAACTGGTTAAAAGAACAGGAC 57.305 37.500 0.00 0.00 35.34 3.85
112 113 6.002653 AGAACTGGTTAAAAGAACAGGACT 57.997 37.500 0.00 0.00 35.34 3.85
113 114 7.133133 AGAACTGGTTAAAAGAACAGGACTA 57.867 36.000 0.00 0.00 35.34 2.59
114 115 6.990939 AGAACTGGTTAAAAGAACAGGACTAC 59.009 38.462 0.00 0.00 35.34 2.73
115 116 5.618236 ACTGGTTAAAAGAACAGGACTACC 58.382 41.667 0.00 0.00 35.34 3.18
116 117 4.976864 TGGTTAAAAGAACAGGACTACCC 58.023 43.478 0.00 0.00 36.73 3.69
117 118 4.202493 TGGTTAAAAGAACAGGACTACCCC 60.202 45.833 0.00 0.00 36.73 4.95
118 119 4.330250 GTTAAAAGAACAGGACTACCCCC 58.670 47.826 0.00 0.00 36.73 5.40
119 120 2.435203 AAAGAACAGGACTACCCCCT 57.565 50.000 0.00 0.00 36.73 4.79
120 121 2.435203 AAGAACAGGACTACCCCCTT 57.565 50.000 0.00 0.00 36.73 3.95
121 122 1.954035 AGAACAGGACTACCCCCTTC 58.046 55.000 0.00 0.00 36.73 3.46
122 123 1.437547 AGAACAGGACTACCCCCTTCT 59.562 52.381 0.00 0.00 36.73 2.85
123 124 2.157989 AGAACAGGACTACCCCCTTCTT 60.158 50.000 0.00 0.00 36.73 2.52
124 125 2.435203 ACAGGACTACCCCCTTCTTT 57.565 50.000 0.00 0.00 36.73 2.52
125 126 2.714808 ACAGGACTACCCCCTTCTTTT 58.285 47.619 0.00 0.00 36.73 2.27
126 127 3.061369 ACAGGACTACCCCCTTCTTTTT 58.939 45.455 0.00 0.00 36.73 1.94
150 151 4.445452 GCATAATGCCATAATCCACCTG 57.555 45.455 0.00 0.00 37.42 4.00
172 173 1.274712 AGGCTAGCATAGAGGGCATC 58.725 55.000 18.24 0.00 42.77 3.91
189 190 0.537188 ATCAACAGGGGAGCACTACG 59.463 55.000 0.00 0.00 0.00 3.51
213 214 6.401796 CGCAAAACACAACCTATACCTTCTAC 60.402 42.308 0.00 0.00 0.00 2.59
257 258 7.953005 TCCTTTTAATCATCACCATTAAGCA 57.047 32.000 0.00 0.00 29.50 3.91
280 281 3.185455 ACTGAGATGCCTAGGTTCCTTT 58.815 45.455 11.31 0.00 0.00 3.11
294 295 2.079170 TCCTTTTGGTGGAATGTGCA 57.921 45.000 0.00 0.00 41.38 4.57
295 296 2.607499 TCCTTTTGGTGGAATGTGCAT 58.393 42.857 0.00 0.00 41.38 3.96
296 297 3.772387 TCCTTTTGGTGGAATGTGCATA 58.228 40.909 0.00 0.00 41.38 3.14
297 298 3.509575 TCCTTTTGGTGGAATGTGCATAC 59.490 43.478 0.00 0.00 41.38 2.39
298 299 3.368323 CCTTTTGGTGGAATGTGCATACC 60.368 47.826 0.00 0.00 34.07 2.73
299 300 2.897271 TTGGTGGAATGTGCATACCT 57.103 45.000 0.00 0.00 32.68 3.08
305 306 2.225242 TGGAATGTGCATACCTGGGTTT 60.225 45.455 0.00 0.00 0.00 3.27
307 308 3.632145 GGAATGTGCATACCTGGGTTTAG 59.368 47.826 0.00 0.00 0.00 1.85
319 320 1.702957 TGGGTTTAGGTCCTGGACTTG 59.297 52.381 25.01 0.00 32.47 3.16
324 325 1.254026 TAGGTCCTGGACTTGACACG 58.746 55.000 25.01 0.00 33.09 4.49
325 326 0.469331 AGGTCCTGGACTTGACACGA 60.469 55.000 25.01 0.00 33.09 4.35
327 328 0.674534 GTCCTGGACTTGACACGAGT 59.325 55.000 19.53 0.00 0.00 4.18
342 343 2.004583 CGAGTGGTCGCATTTTCCTA 57.995 50.000 0.00 0.00 39.88 2.94
351 352 7.973944 AGTGGTCGCATTTTCCTAAATTTATTC 59.026 33.333 0.00 0.00 31.63 1.75
354 355 7.435192 GGTCGCATTTTCCTAAATTTATTCCAG 59.565 37.037 0.00 0.00 31.63 3.86
362 363 9.500785 TTTCCTAAATTTATTCCAGGCTTTTTG 57.499 29.630 0.00 0.00 0.00 2.44
363 364 8.429237 TCCTAAATTTATTCCAGGCTTTTTGA 57.571 30.769 0.00 0.00 0.00 2.69
364 365 9.045745 TCCTAAATTTATTCCAGGCTTTTTGAT 57.954 29.630 0.00 0.00 0.00 2.57
367 368 8.552083 AAATTTATTCCAGGCTTTTTGATGAC 57.448 30.769 0.00 0.00 0.00 3.06
378 379 2.721274 TTTGATGACATTTGTGGCGG 57.279 45.000 0.00 0.00 0.00 6.13
386 387 3.280938 ATTTGTGGCGGGCCTGCTA 62.281 57.895 34.76 28.22 36.94 3.49
408 412 2.441410 CTCAGTCTCTAGGTGCTCACA 58.559 52.381 2.21 0.00 0.00 3.58
425 429 4.111198 CTCACATGAGAGAGTGTACATGC 58.889 47.826 14.32 0.00 44.74 4.06
459 464 1.281566 TGACTGTGCGTGCGTGTATG 61.282 55.000 0.00 0.00 0.00 2.39
462 467 2.226712 CTGTGCGTGCGTGTATGTGG 62.227 60.000 0.00 0.00 0.00 4.17
465 470 0.672091 TGCGTGCGTGTATGTGGATT 60.672 50.000 0.00 0.00 0.00 3.01
467 472 1.661617 GCGTGCGTGTATGTGGATTTA 59.338 47.619 0.00 0.00 0.00 1.40
482 487 5.049336 TGTGGATTTATACGTTTGTGGTGTG 60.049 40.000 0.00 0.00 0.00 3.82
501 506 6.760770 TGGTGTGTTTCTCAAAATGAAAATCC 59.239 34.615 0.00 0.00 35.54 3.01
524 529 3.524095 ACCATCAAGGGTGAATGTGAA 57.476 42.857 0.00 0.00 43.89 3.18
672 756 5.448654 ACATTGAGCCCAATCTTTGCTATA 58.551 37.500 0.00 0.00 40.81 1.31
702 786 1.479323 CAACTTGCCATGCATTAGCCT 59.521 47.619 14.35 0.00 38.76 4.58
711 795 3.306919 CCATGCATTAGCCTTTTTGTGGT 60.307 43.478 0.00 0.00 41.13 4.16
719 803 4.551702 AGCCTTTTTGTGGTCAGTTTTT 57.448 36.364 0.00 0.00 0.00 1.94
748 883 3.652274 AGCTAAAATGTTGCGCAATGTT 58.348 36.364 27.79 20.14 0.00 2.71
750 885 3.480185 GCTAAAATGTTGCGCAATGTTCG 60.480 43.478 27.79 9.78 0.00 3.95
754 889 2.194800 TGTTGCGCAATGTTCGAAAA 57.805 40.000 27.79 0.00 0.00 2.29
763 901 7.441072 TGCGCAATGTTCGAAAATAAAAATAC 58.559 30.769 8.16 0.00 0.00 1.89
789 927 7.254387 CCGCAAATTTCTGATTCAAAGTCAAAA 60.254 33.333 0.00 0.00 0.00 2.44
800 938 8.632679 TGATTCAAAGTCAAAATTTACTCTGCT 58.367 29.630 0.00 0.00 0.00 4.24
805 943 9.897744 CAAAGTCAAAATTTACTCTGCTGATTA 57.102 29.630 0.00 0.00 0.00 1.75
811 949 9.160496 CAAAATTTACTCTGCTGATTACTCTCT 57.840 33.333 0.00 0.00 0.00 3.10
851 989 5.500234 TGATTCTCCCACTAACTTGGATTG 58.500 41.667 0.00 0.00 39.24 2.67
854 992 1.005450 TCCCACTAACTTGGATTGGCC 59.995 52.381 0.00 0.00 39.24 5.36
873 1011 2.167075 GCCAAGGGGAAACTTCATGATG 59.833 50.000 7.04 7.04 35.59 3.07
874 1012 3.434309 CCAAGGGGAAACTTCATGATGT 58.566 45.455 8.37 8.37 35.59 3.06
875 1013 4.599041 CCAAGGGGAAACTTCATGATGTA 58.401 43.478 14.07 0.00 35.59 2.29
879 1017 5.990668 AGGGGAAACTTCATGATGTAGTAC 58.009 41.667 14.07 6.80 27.67 2.73
1010 1474 0.870307 GCCGCCGGACTATATATGCG 60.870 60.000 7.68 6.02 41.51 4.73
1056 1522 4.050553 CACATTCATCCAACAACCAACAC 58.949 43.478 0.00 0.00 0.00 3.32
1058 1529 2.443958 TCATCCAACAACCAACACCA 57.556 45.000 0.00 0.00 0.00 4.17
1060 1531 1.068434 CATCCAACAACCAACACCACC 59.932 52.381 0.00 0.00 0.00 4.61
1069 1540 1.234615 CCAACACCACCGCTTACCAG 61.235 60.000 0.00 0.00 0.00 4.00
1070 1541 0.534203 CAACACCACCGCTTACCAGT 60.534 55.000 0.00 0.00 0.00 4.00
1806 2327 3.792047 CGTCGTGCAGCACCATGG 61.792 66.667 20.16 11.19 0.00 3.66
2004 2537 1.203523 CAGCGTCCTCAACTTCTAGCT 59.796 52.381 0.00 0.00 0.00 3.32
2005 2538 2.423892 CAGCGTCCTCAACTTCTAGCTA 59.576 50.000 0.00 0.00 31.98 3.32
2006 2539 2.424246 AGCGTCCTCAACTTCTAGCTAC 59.576 50.000 0.00 0.00 31.38 3.58
2025 2560 9.916397 CTAGCTACAACCAAAAATTATTACTCG 57.084 33.333 0.00 0.00 0.00 4.18
2046 2581 7.507829 ACTCGTACTACTAATCACTAGTCCAT 58.492 38.462 0.00 0.00 40.21 3.41
2077 2633 3.631227 GGAGCCATCTCAAAATTCAGAGG 59.369 47.826 7.12 0.00 41.13 3.69
2098 2654 4.080356 AGGTAAAATACATGAGCCAGCAGA 60.080 41.667 0.00 0.00 0.00 4.26
2099 2656 4.823989 GGTAAAATACATGAGCCAGCAGAT 59.176 41.667 0.00 0.00 0.00 2.90
2112 2669 2.224042 CCAGCAGATTATGTAGCGGTCA 60.224 50.000 0.00 0.00 0.00 4.02
2113 2670 2.797156 CAGCAGATTATGTAGCGGTCAC 59.203 50.000 0.00 0.00 0.00 3.67
2114 2671 2.695666 AGCAGATTATGTAGCGGTCACT 59.304 45.455 0.00 0.00 0.00 3.41
2165 2741 6.319658 ACTGGTTGGCATATGAAACTCAATAG 59.680 38.462 6.97 7.53 0.00 1.73
2166 2742 6.186957 TGGTTGGCATATGAAACTCAATAGT 58.813 36.000 6.97 0.00 37.65 2.12
2167 2743 7.342581 TGGTTGGCATATGAAACTCAATAGTA 58.657 34.615 6.97 0.00 33.75 1.82
2203 2780 8.704668 ACTAGACAAAAGGAATGGTGAAATTTT 58.295 29.630 0.00 0.00 0.00 1.82
2305 2885 6.370994 AGAATTCATAGATTCGATGGATGCAC 59.629 38.462 8.44 2.20 40.22 4.57
2353 2938 5.244785 TCCGATCAAGTACATGACTACAC 57.755 43.478 2.33 0.00 37.44 2.90
2354 2939 4.703093 TCCGATCAAGTACATGACTACACA 59.297 41.667 2.33 0.00 37.44 3.72
2356 2941 4.798907 CGATCAAGTACATGACTACACACC 59.201 45.833 2.33 0.00 37.44 4.16
2357 2942 5.621329 CGATCAAGTACATGACTACACACCA 60.621 44.000 2.33 0.00 37.44 4.17
2358 2943 5.538849 TCAAGTACATGACTACACACCAA 57.461 39.130 0.00 0.00 37.44 3.67
2359 2944 5.919755 TCAAGTACATGACTACACACCAAA 58.080 37.500 0.00 0.00 37.44 3.28
2360 2945 6.530120 TCAAGTACATGACTACACACCAAAT 58.470 36.000 0.00 0.00 37.44 2.32
2361 2946 6.995686 TCAAGTACATGACTACACACCAAATT 59.004 34.615 0.00 0.00 37.44 1.82
2362 2947 7.172532 TCAAGTACATGACTACACACCAAATTC 59.827 37.037 0.00 0.00 37.44 2.17
2363 2948 6.530120 AGTACATGACTACACACCAAATTCA 58.470 36.000 0.00 0.00 36.27 2.57
2364 2949 5.689383 ACATGACTACACACCAAATTCAC 57.311 39.130 0.00 0.00 0.00 3.18
2365 2950 5.129634 ACATGACTACACACCAAATTCACA 58.870 37.500 0.00 0.00 0.00 3.58
2366 2951 5.008613 ACATGACTACACACCAAATTCACAC 59.991 40.000 0.00 0.00 0.00 3.82
2367 2952 3.880490 TGACTACACACCAAATTCACACC 59.120 43.478 0.00 0.00 0.00 4.16
2368 2953 3.880490 GACTACACACCAAATTCACACCA 59.120 43.478 0.00 0.00 0.00 4.17
2369 2954 4.274147 ACTACACACCAAATTCACACCAA 58.726 39.130 0.00 0.00 0.00 3.67
2370 2955 4.707448 ACTACACACCAAATTCACACCAAA 59.293 37.500 0.00 0.00 0.00 3.28
2371 2956 4.751767 ACACACCAAATTCACACCAAAT 57.248 36.364 0.00 0.00 0.00 2.32
2372 2957 5.096443 ACACACCAAATTCACACCAAATT 57.904 34.783 0.00 0.00 0.00 1.82
2373 2958 5.115480 ACACACCAAATTCACACCAAATTC 58.885 37.500 0.00 0.00 0.00 2.17
2374 2959 5.114780 CACACCAAATTCACACCAAATTCA 58.885 37.500 0.00 0.00 0.00 2.57
2375 2960 5.006552 CACACCAAATTCACACCAAATTCAC 59.993 40.000 0.00 0.00 0.00 3.18
2376 2961 5.114780 CACCAAATTCACACCAAATTCACA 58.885 37.500 0.00 0.00 0.00 3.58
2377 2962 5.006552 CACCAAATTCACACCAAATTCACAC 59.993 40.000 0.00 0.00 0.00 3.82
2378 2963 4.511082 CCAAATTCACACCAAATTCACACC 59.489 41.667 0.00 0.00 0.00 4.16
2379 2964 5.114780 CAAATTCACACCAAATTCACACCA 58.885 37.500 0.00 0.00 0.00 4.17
2380 2965 5.350504 AATTCACACCAAATTCACACCAA 57.649 34.783 0.00 0.00 0.00 3.67
2381 2966 4.808414 TTCACACCAAATTCACACCAAA 57.192 36.364 0.00 0.00 0.00 3.28
2382 2967 5.350504 TTCACACCAAATTCACACCAAAT 57.649 34.783 0.00 0.00 0.00 2.32
2383 2968 5.350504 TCACACCAAATTCACACCAAATT 57.649 34.783 0.00 0.00 0.00 1.82
2384 2969 5.355596 TCACACCAAATTCACACCAAATTC 58.644 37.500 0.00 0.00 0.00 2.17
2385 2970 5.105187 TCACACCAAATTCACACCAAATTCA 60.105 36.000 0.00 0.00 0.00 2.57
2386 2971 5.759273 CACACCAAATTCACACCAAATTCAT 59.241 36.000 0.00 0.00 0.00 2.57
2387 2972 6.927936 CACACCAAATTCACACCAAATTCATA 59.072 34.615 0.00 0.00 0.00 2.15
2388 2973 7.116662 CACACCAAATTCACACCAAATTCATAG 59.883 37.037 0.00 0.00 0.00 2.23
2389 2974 7.015098 ACACCAAATTCACACCAAATTCATAGA 59.985 33.333 0.00 0.00 0.00 1.98
2390 2975 8.036575 CACCAAATTCACACCAAATTCATAGAT 58.963 33.333 0.00 0.00 0.00 1.98
2391 2976 8.596293 ACCAAATTCACACCAAATTCATAGATT 58.404 29.630 0.00 0.00 0.00 2.40
2392 2977 9.090692 CCAAATTCACACCAAATTCATAGATTC 57.909 33.333 0.00 0.00 0.00 2.52
2393 2978 8.800972 CAAATTCACACCAAATTCATAGATTCG 58.199 33.333 0.00 0.00 0.00 3.34
2394 2979 7.864108 ATTCACACCAAATTCATAGATTCGA 57.136 32.000 0.00 0.00 0.00 3.71
2395 2980 7.864108 TTCACACCAAATTCATAGATTCGAT 57.136 32.000 0.00 0.00 0.00 3.59
2396 2981 7.250445 TCACACCAAATTCATAGATTCGATG 57.750 36.000 0.70 0.70 0.00 3.84
2397 2982 6.260714 TCACACCAAATTCATAGATTCGATGG 59.739 38.462 6.88 0.00 0.00 3.51
2398 2983 6.260714 CACACCAAATTCATAGATTCGATGGA 59.739 38.462 6.88 0.00 0.00 3.41
2399 2984 7.000472 ACACCAAATTCATAGATTCGATGGAT 59.000 34.615 6.88 1.29 0.00 3.41
2400 2985 7.040892 ACACCAAATTCATAGATTCGATGGATG 60.041 37.037 6.88 0.00 0.00 3.51
2401 2986 6.072286 ACCAAATTCATAGATTCGATGGATGC 60.072 38.462 6.88 0.00 0.00 3.91
2402 2987 6.072342 CCAAATTCATAGATTCGATGGATGCA 60.072 38.462 6.88 0.00 0.00 3.96
2407 2992 7.781548 TCATAGATTCGATGGATGCATAATG 57.218 36.000 0.00 0.00 0.00 1.90
2434 3019 3.450457 GGGCATTCACACCAAATTCCATA 59.550 43.478 0.00 0.00 0.00 2.74
2448 3033 4.983671 ATTCCATAACCCGAGCTTTTTC 57.016 40.909 0.00 0.00 0.00 2.29
2452 3037 3.127030 CCATAACCCGAGCTTTTTCTGAC 59.873 47.826 0.00 0.00 0.00 3.51
2543 3141 9.712359 GAGTTAGAAAAACATGTAACTCGTTTT 57.288 29.630 16.93 10.98 42.91 2.43
2562 3163 7.424001 TCGTTTTATTTTCAATACAACGGGTT 58.576 30.769 19.87 0.00 37.89 4.11
2599 3200 2.312390 TGGCCCTCTTTGGTTTTGTAC 58.688 47.619 0.00 0.00 0.00 2.90
2614 3215 9.866798 TTGGTTTTGTACTTTTTAACGGTAAAT 57.133 25.926 6.46 0.00 0.00 1.40
2618 3219 9.866798 TTTTGTACTTTTTAACGGTAAATGGTT 57.133 25.926 6.46 0.00 0.00 3.67
2658 3259 2.616634 TGATGATCTTGAGCTGCCTC 57.383 50.000 0.00 0.00 38.62 4.70
2687 3288 0.535335 TACAACGAGGGATGGCTGTC 59.465 55.000 0.00 0.00 0.00 3.51
2693 3294 1.752436 CGAGGGATGGCTGTCTCTAGT 60.752 57.143 0.00 0.00 0.00 2.57
2701 3302 2.497675 TGGCTGTCTCTAGTTGCCTAAG 59.502 50.000 0.00 0.00 43.57 2.18
2702 3303 2.761208 GGCTGTCTCTAGTTGCCTAAGA 59.239 50.000 0.00 0.00 40.36 2.10
2703 3304 3.181480 GGCTGTCTCTAGTTGCCTAAGAG 60.181 52.174 0.00 0.00 40.36 2.85
2704 3305 3.736740 GCTGTCTCTAGTTGCCTAAGAGC 60.737 52.174 0.00 0.00 0.00 4.09
2705 3306 3.431415 TGTCTCTAGTTGCCTAAGAGCA 58.569 45.455 0.00 0.00 42.17 4.26
2706 3307 4.026744 TGTCTCTAGTTGCCTAAGAGCAT 58.973 43.478 0.00 0.00 43.64 3.79
2707 3308 4.098654 TGTCTCTAGTTGCCTAAGAGCATC 59.901 45.833 0.00 0.00 43.64 3.91
2718 3319 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
2719 3320 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
2720 3321 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
2721 3322 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
2722 3323 4.087892 ATCTCCAACAGCCGCGCT 62.088 61.111 5.56 0.00 40.77 5.92
2723 3324 3.612247 ATCTCCAACAGCCGCGCTT 62.612 57.895 5.56 0.00 36.40 4.68
2724 3325 3.793144 CTCCAACAGCCGCGCTTC 61.793 66.667 5.56 0.00 36.40 3.86
2744 3345 4.674496 GCCGCGCGCTAAAAATTA 57.326 50.000 30.48 0.00 0.00 1.40
2745 3346 2.480593 GCCGCGCGCTAAAAATTAG 58.519 52.632 30.48 9.83 0.00 1.73
2746 3347 0.247934 GCCGCGCGCTAAAAATTAGT 60.248 50.000 30.48 0.00 0.00 2.24
2747 3348 1.792632 GCCGCGCGCTAAAAATTAGTT 60.793 47.619 30.48 0.00 0.00 2.24
2748 3349 2.511879 CCGCGCGCTAAAAATTAGTTT 58.488 42.857 30.48 0.00 0.00 2.66
2749 3350 2.275253 CCGCGCGCTAAAAATTAGTTTG 59.725 45.455 30.48 7.74 0.00 2.93
2750 3351 2.283672 CGCGCGCTAAAAATTAGTTTGC 60.284 45.455 30.48 0.00 0.00 3.68
2751 3352 2.027569 GCGCGCTAAAAATTAGTTTGCC 59.972 45.455 26.67 0.00 0.00 4.52
2752 3353 2.275253 CGCGCTAAAAATTAGTTTGCCG 59.725 45.455 5.56 4.72 0.00 5.69
2753 3354 3.239254 GCGCTAAAAATTAGTTTGCCGT 58.761 40.909 0.00 0.00 0.00 5.68
2754 3355 3.058913 GCGCTAAAAATTAGTTTGCCGTG 59.941 43.478 0.00 0.00 0.00 4.94
2755 3356 3.058913 CGCTAAAAATTAGTTTGCCGTGC 59.941 43.478 0.00 0.00 0.00 5.34
2756 3357 3.058913 GCTAAAAATTAGTTTGCCGTGCG 59.941 43.478 0.00 0.00 0.00 5.34
2757 3358 1.414378 AAAATTAGTTTGCCGTGCGC 58.586 45.000 0.00 0.00 38.31 6.09
2758 3359 0.388006 AAATTAGTTTGCCGTGCGCC 60.388 50.000 4.18 0.00 36.24 6.53
2759 3360 2.521733 AATTAGTTTGCCGTGCGCCG 62.522 55.000 4.18 8.27 36.24 6.46
2760 3361 4.973055 TAGTTTGCCGTGCGCCGT 62.973 61.111 4.18 0.00 36.24 5.68
2770 3371 4.595538 TGCGCCGTTCGTCTGGTT 62.596 61.111 4.18 0.00 41.07 3.67
2771 3372 3.343421 GCGCCGTTCGTCTGGTTT 61.343 61.111 0.00 0.00 41.07 3.27
2772 3373 2.888998 GCGCCGTTCGTCTGGTTTT 61.889 57.895 0.00 0.00 41.07 2.43
2773 3374 1.083015 CGCCGTTCGTCTGGTTTTG 60.083 57.895 0.00 0.00 0.00 2.44
2774 3375 1.370051 GCCGTTCGTCTGGTTTTGC 60.370 57.895 0.00 0.00 0.00 3.68
2775 3376 1.083015 CCGTTCGTCTGGTTTTGCG 60.083 57.895 0.00 0.00 0.00 4.85
2776 3377 1.639534 CGTTCGTCTGGTTTTGCGT 59.360 52.632 0.00 0.00 0.00 5.24
2777 3378 0.653323 CGTTCGTCTGGTTTTGCGTG 60.653 55.000 0.00 0.00 0.00 5.34
2778 3379 0.316689 GTTCGTCTGGTTTTGCGTGG 60.317 55.000 0.00 0.00 0.00 4.94
2779 3380 2.051345 CGTCTGGTTTTGCGTGGC 60.051 61.111 0.00 0.00 0.00 5.01
2780 3381 2.335011 GTCTGGTTTTGCGTGGCC 59.665 61.111 0.00 0.00 0.00 5.36
2781 3382 2.124109 TCTGGTTTTGCGTGGCCA 60.124 55.556 0.00 0.00 0.00 5.36
2782 3383 2.027460 CTGGTTTTGCGTGGCCAC 59.973 61.111 26.78 26.78 0.00 5.01
2783 3384 3.498401 CTGGTTTTGCGTGGCCACC 62.498 63.158 29.95 21.83 0.00 4.61
2784 3385 3.532155 GGTTTTGCGTGGCCACCA 61.532 61.111 29.95 24.10 0.00 4.17
2785 3386 2.027460 GTTTTGCGTGGCCACCAG 59.973 61.111 29.95 17.96 32.34 4.00
2786 3387 2.441164 TTTTGCGTGGCCACCAGT 60.441 55.556 29.95 0.00 32.34 4.00
2787 3388 2.780094 TTTTGCGTGGCCACCAGTG 61.780 57.895 29.95 16.82 32.34 3.66
2799 3400 2.113774 CCAGTGCTGGCTCCAACA 59.886 61.111 5.19 0.00 44.73 3.33
2800 3401 1.970114 CCAGTGCTGGCTCCAACAG 60.970 63.158 5.19 0.00 44.73 3.16
2809 3410 2.434185 CTCCAACAGCCGCGCTAA 60.434 61.111 5.56 0.00 36.40 3.09
2810 3411 2.031314 TCCAACAGCCGCGCTAAA 59.969 55.556 5.56 0.00 36.40 1.85
2811 3412 1.573829 CTCCAACAGCCGCGCTAAAA 61.574 55.000 5.56 0.00 36.40 1.52
2812 3413 0.958382 TCCAACAGCCGCGCTAAAAT 60.958 50.000 5.56 0.00 36.40 1.82
2813 3414 0.798009 CCAACAGCCGCGCTAAAATG 60.798 55.000 5.56 0.00 36.40 2.32
2814 3415 1.154035 AACAGCCGCGCTAAAATGC 60.154 52.632 5.56 0.00 36.40 3.56
2815 3416 1.861542 AACAGCCGCGCTAAAATGCA 61.862 50.000 5.56 0.00 36.40 3.96
2816 3417 1.584483 CAGCCGCGCTAAAATGCAG 60.584 57.895 5.56 0.00 36.40 4.41
2817 3418 2.278142 GCCGCGCTAAAATGCAGG 60.278 61.111 5.56 0.00 34.80 4.85
2818 3419 2.408835 CCGCGCTAAAATGCAGGG 59.591 61.111 5.56 0.00 0.00 4.45
2819 3420 2.278142 CGCGCTAAAATGCAGGGC 60.278 61.111 5.56 0.00 45.62 5.19
2821 3422 2.278142 CGCTAAAATGCAGGGCGC 60.278 61.111 0.00 0.00 39.42 6.53
2838 3439 3.701530 CACGCGTCGCTTCAGCAA 61.702 61.111 9.86 0.00 42.21 3.91
2839 3440 3.702555 ACGCGTCGCTTCAGCAAC 61.703 61.111 16.36 0.00 42.21 4.17
2840 3441 3.406361 CGCGTCGCTTCAGCAACT 61.406 61.111 16.36 0.00 42.21 3.16
2841 3442 2.939022 GCGTCGCTTCAGCAACTT 59.061 55.556 10.68 0.00 42.21 2.66
2842 3443 1.439365 GCGTCGCTTCAGCAACTTG 60.439 57.895 10.68 0.00 42.21 3.16
2843 3444 1.439365 CGTCGCTTCAGCAACTTGC 60.439 57.895 5.55 5.55 45.46 4.01
2882 3483 4.182433 TCGCCGGGGCATTGCATA 62.182 61.111 14.85 0.00 42.06 3.14
2883 3484 2.985282 CGCCGGGGCATTGCATAT 60.985 61.111 11.39 0.00 42.06 1.78
2884 3485 1.673993 CGCCGGGGCATTGCATATA 60.674 57.895 11.39 0.00 42.06 0.86
2885 3486 1.031571 CGCCGGGGCATTGCATATAT 61.032 55.000 11.39 0.00 42.06 0.86
2886 3487 0.457035 GCCGGGGCATTGCATATATG 59.543 55.000 11.39 8.45 41.49 1.78
2887 3488 1.105457 CCGGGGCATTGCATATATGG 58.895 55.000 14.51 0.00 0.00 2.74
2888 3489 0.457035 CGGGGCATTGCATATATGGC 59.543 55.000 14.51 13.51 45.03 4.40
2889 3490 1.559368 GGGGCATTGCATATATGGCA 58.441 50.000 20.93 9.77 46.89 4.92
2890 3491 2.112998 GGGGCATTGCATATATGGCAT 58.887 47.619 20.93 4.88 46.89 4.40
2891 3492 2.502538 GGGGCATTGCATATATGGCATT 59.497 45.455 20.93 6.75 46.89 3.56
2892 3493 3.054948 GGGGCATTGCATATATGGCATTT 60.055 43.478 20.93 0.00 46.89 2.32
2893 3494 3.936453 GGGCATTGCATATATGGCATTTG 59.064 43.478 20.93 12.73 46.89 2.32
2894 3495 4.322877 GGGCATTGCATATATGGCATTTGA 60.323 41.667 20.93 0.00 46.89 2.69
2895 3496 5.239351 GGCATTGCATATATGGCATTTGAA 58.761 37.500 16.20 0.00 45.09 2.69
2896 3497 5.121142 GGCATTGCATATATGGCATTTGAAC 59.879 40.000 16.20 0.00 45.09 3.18
2897 3498 5.697178 GCATTGCATATATGGCATTTGAACA 59.303 36.000 14.51 0.00 41.58 3.18
2898 3499 6.347079 GCATTGCATATATGGCATTTGAACAC 60.347 38.462 14.51 0.00 41.58 3.32
2899 3500 5.848833 TGCATATATGGCATTTGAACACA 57.151 34.783 14.51 0.00 36.11 3.72
2900 3501 6.218108 TGCATATATGGCATTTGAACACAA 57.782 33.333 14.51 0.00 36.11 3.33
2901 3502 6.637657 TGCATATATGGCATTTGAACACAAA 58.362 32.000 14.51 0.00 36.11 2.83
2902 3503 7.101700 TGCATATATGGCATTTGAACACAAAA 58.898 30.769 14.51 0.00 37.13 2.44
2903 3504 7.769507 TGCATATATGGCATTTGAACACAAAAT 59.230 29.630 14.51 0.00 37.13 1.82
2904 3505 9.258826 GCATATATGGCATTTGAACACAAAATA 57.741 29.630 14.51 0.00 37.13 1.40
2933 3534 7.549615 TGAAACATTCAAAATGCAATGAACA 57.450 28.000 13.17 5.99 38.29 3.18
2934 3535 8.155821 TGAAACATTCAAAATGCAATGAACAT 57.844 26.923 13.17 4.46 38.29 2.71
2935 3536 8.070769 TGAAACATTCAAAATGCAATGAACATG 58.929 29.630 13.17 11.46 38.29 3.21
2936 3537 7.731882 AACATTCAAAATGCAATGAACATGA 57.268 28.000 13.17 0.00 38.29 3.07
2937 3538 7.124347 ACATTCAAAATGCAATGAACATGAC 57.876 32.000 13.17 0.00 38.29 3.06
2938 3539 6.706716 ACATTCAAAATGCAATGAACATGACA 59.293 30.769 13.17 0.00 38.29 3.58
2939 3540 7.389330 ACATTCAAAATGCAATGAACATGACAT 59.611 29.630 13.17 1.80 38.29 3.06
2940 3541 8.874816 CATTCAAAATGCAATGAACATGACATA 58.125 29.630 13.17 0.00 38.29 2.29
2941 3542 9.607988 ATTCAAAATGCAATGAACATGACATAT 57.392 25.926 13.17 0.00 38.29 1.78
2967 3568 8.545229 AAAATTTCACACAAACAAGTTGATGA 57.455 26.923 10.54 0.84 39.87 2.92
2968 3569 8.545229 AAATTTCACACAAACAAGTTGATGAA 57.455 26.923 10.54 6.61 40.69 2.57
2969 3570 8.721019 AATTTCACACAAACAAGTTGATGAAT 57.279 26.923 10.54 1.64 41.34 2.57
2970 3571 9.814899 AATTTCACACAAACAAGTTGATGAATA 57.185 25.926 10.54 2.54 41.34 1.75
2971 3572 9.814899 ATTTCACACAAACAAGTTGATGAATAA 57.185 25.926 10.54 1.84 41.34 1.40
2972 3573 9.645059 TTTCACACAAACAAGTTGATGAATAAA 57.355 25.926 10.54 6.81 41.34 1.40
2973 3574 9.645059 TTCACACAAACAAGTTGATGAATAAAA 57.355 25.926 10.54 1.00 39.14 1.52
2974 3575 9.299963 TCACACAAACAAGTTGATGAATAAAAG 57.700 29.630 10.54 0.00 39.87 2.27
2975 3576 9.086336 CACACAAACAAGTTGATGAATAAAAGT 57.914 29.630 10.54 0.33 39.87 2.66
2976 3577 9.651913 ACACAAACAAGTTGATGAATAAAAGTT 57.348 25.926 10.54 0.00 39.87 2.66
2978 3579 9.868277 ACAAACAAGTTGATGAATAAAAGTTCA 57.132 25.926 10.54 0.00 39.87 3.18
2985 3586 8.450964 AGTTGATGAATAAAAGTTCATACCACG 58.549 33.333 2.43 0.00 46.02 4.94
2986 3587 8.447833 GTTGATGAATAAAAGTTCATACCACGA 58.552 33.333 2.43 0.00 46.02 4.35
2987 3588 8.196802 TGATGAATAAAAGTTCATACCACGAG 57.803 34.615 2.43 0.00 46.02 4.18
2988 3589 7.822334 TGATGAATAAAAGTTCATACCACGAGT 59.178 33.333 2.43 0.00 46.02 4.18
2989 3590 7.972832 TGAATAAAAGTTCATACCACGAGTT 57.027 32.000 0.00 0.00 33.41 3.01
2990 3591 8.385898 TGAATAAAAGTTCATACCACGAGTTT 57.614 30.769 0.00 0.00 33.41 2.66
2991 3592 9.491675 TGAATAAAAGTTCATACCACGAGTTTA 57.508 29.630 0.00 0.00 33.41 2.01
2996 3597 9.673454 AAAAGTTCATACCACGAGTTTAAAATC 57.327 29.630 5.58 5.58 0.00 2.17
2997 3598 7.972832 AGTTCATACCACGAGTTTAAAATCA 57.027 32.000 15.28 0.00 0.00 2.57
2998 3599 8.561738 AGTTCATACCACGAGTTTAAAATCAT 57.438 30.769 15.28 0.00 0.00 2.45
2999 3600 8.450964 AGTTCATACCACGAGTTTAAAATCATG 58.549 33.333 15.28 10.26 0.00 3.07
3000 3601 6.781138 TCATACCACGAGTTTAAAATCATGC 58.219 36.000 15.28 0.00 0.00 4.06
3001 3602 4.434713 ACCACGAGTTTAAAATCATGCC 57.565 40.909 15.28 0.00 0.00 4.40
3002 3603 3.192633 ACCACGAGTTTAAAATCATGCCC 59.807 43.478 15.28 0.00 0.00 5.36
3003 3604 3.192422 CCACGAGTTTAAAATCATGCCCA 59.808 43.478 15.28 0.00 0.00 5.36
3004 3605 4.165779 CACGAGTTTAAAATCATGCCCAC 58.834 43.478 15.28 0.00 0.00 4.61
3005 3606 3.823873 ACGAGTTTAAAATCATGCCCACA 59.176 39.130 15.28 0.00 0.00 4.17
3006 3607 4.279671 ACGAGTTTAAAATCATGCCCACAA 59.720 37.500 15.28 0.00 0.00 3.33
3007 3608 4.858692 CGAGTTTAAAATCATGCCCACAAG 59.141 41.667 15.28 0.00 0.00 3.16
3008 3609 5.564651 CGAGTTTAAAATCATGCCCACAAGT 60.565 40.000 15.28 0.00 0.00 3.16
3009 3610 6.173427 AGTTTAAAATCATGCCCACAAGTT 57.827 33.333 0.00 0.00 0.00 2.66
3010 3611 6.223120 AGTTTAAAATCATGCCCACAAGTTC 58.777 36.000 0.00 0.00 0.00 3.01
3011 3612 5.798125 TTAAAATCATGCCCACAAGTTCA 57.202 34.783 0.00 0.00 0.00 3.18
3012 3613 4.895668 AAAATCATGCCCACAAGTTCAT 57.104 36.364 0.00 0.00 0.00 2.57
3013 3614 4.460948 AAATCATGCCCACAAGTTCATC 57.539 40.909 0.00 0.00 0.00 2.92
3014 3615 1.838112 TCATGCCCACAAGTTCATCC 58.162 50.000 0.00 0.00 0.00 3.51
3015 3616 1.075212 TCATGCCCACAAGTTCATCCA 59.925 47.619 0.00 0.00 0.00 3.41
3016 3617 1.894466 CATGCCCACAAGTTCATCCAA 59.106 47.619 0.00 0.00 0.00 3.53
3017 3618 1.327303 TGCCCACAAGTTCATCCAAC 58.673 50.000 0.00 0.00 34.86 3.77
3018 3619 0.603065 GCCCACAAGTTCATCCAACC 59.397 55.000 0.00 0.00 35.28 3.77
3019 3620 1.993956 CCCACAAGTTCATCCAACCA 58.006 50.000 0.00 0.00 35.28 3.67
3020 3621 2.315176 CCCACAAGTTCATCCAACCAA 58.685 47.619 0.00 0.00 35.28 3.67
3021 3622 2.297033 CCCACAAGTTCATCCAACCAAG 59.703 50.000 0.00 0.00 35.28 3.61
3022 3623 2.958355 CCACAAGTTCATCCAACCAAGT 59.042 45.455 0.00 0.00 35.28 3.16
3023 3624 3.384467 CCACAAGTTCATCCAACCAAGTT 59.616 43.478 0.00 0.00 35.28 2.66
3024 3625 4.141959 CCACAAGTTCATCCAACCAAGTTT 60.142 41.667 0.00 0.00 35.28 2.66
3025 3626 5.068460 CCACAAGTTCATCCAACCAAGTTTA 59.932 40.000 0.00 0.00 35.28 2.01
3026 3627 6.406400 CCACAAGTTCATCCAACCAAGTTTAA 60.406 38.462 0.00 0.00 35.28 1.52
3027 3628 7.038659 CACAAGTTCATCCAACCAAGTTTAAA 58.961 34.615 0.00 0.00 35.28 1.52
3028 3629 7.547370 CACAAGTTCATCCAACCAAGTTTAAAA 59.453 33.333 0.00 0.00 35.28 1.52
3029 3630 8.264347 ACAAGTTCATCCAACCAAGTTTAAAAT 58.736 29.630 0.00 0.00 35.28 1.82
3030 3631 8.550376 CAAGTTCATCCAACCAAGTTTAAAATG 58.450 33.333 0.00 0.00 35.28 2.32
3031 3632 6.705825 AGTTCATCCAACCAAGTTTAAAATGC 59.294 34.615 0.00 0.00 35.28 3.56
3032 3633 6.166984 TCATCCAACCAAGTTTAAAATGCA 57.833 33.333 0.00 0.00 0.00 3.96
3033 3634 6.586344 TCATCCAACCAAGTTTAAAATGCAA 58.414 32.000 0.00 0.00 0.00 4.08
3034 3635 7.050377 TCATCCAACCAAGTTTAAAATGCAAA 58.950 30.769 0.00 0.00 0.00 3.68
3035 3636 6.670077 TCCAACCAAGTTTAAAATGCAAAC 57.330 33.333 0.00 0.00 36.37 2.93
3036 3637 5.586643 TCCAACCAAGTTTAAAATGCAAACC 59.413 36.000 0.00 0.00 36.71 3.27
3037 3638 5.355350 CCAACCAAGTTTAAAATGCAAACCA 59.645 36.000 0.00 0.00 36.71 3.67
3038 3639 6.127897 CCAACCAAGTTTAAAATGCAAACCAA 60.128 34.615 0.00 0.00 36.71 3.67
3039 3640 6.676237 ACCAAGTTTAAAATGCAAACCAAG 57.324 33.333 0.00 0.00 36.71 3.61
3040 3641 6.176896 ACCAAGTTTAAAATGCAAACCAAGT 58.823 32.000 0.00 0.00 36.71 3.16
3041 3642 6.657117 ACCAAGTTTAAAATGCAAACCAAGTT 59.343 30.769 0.00 0.00 36.71 2.66
3042 3643 7.148323 ACCAAGTTTAAAATGCAAACCAAGTTC 60.148 33.333 0.00 0.00 36.71 3.01
3043 3644 7.148340 CCAAGTTTAAAATGCAAACCAAGTTCA 60.148 33.333 0.00 0.00 36.71 3.18
3044 3645 7.913674 AGTTTAAAATGCAAACCAAGTTCAA 57.086 28.000 0.00 0.00 36.71 2.69
3045 3646 7.747888 AGTTTAAAATGCAAACCAAGTTCAAC 58.252 30.769 0.00 0.00 36.71 3.18
3046 3647 7.389053 AGTTTAAAATGCAAACCAAGTTCAACA 59.611 29.630 0.00 0.00 36.71 3.33
3047 3648 5.544136 AAAATGCAAACCAAGTTCAACAC 57.456 34.783 0.00 0.00 0.00 3.32
3048 3649 3.883830 ATGCAAACCAAGTTCAACACA 57.116 38.095 0.00 0.00 0.00 3.72
3049 3650 2.953020 TGCAAACCAAGTTCAACACAC 58.047 42.857 0.00 0.00 0.00 3.82
3050 3651 2.297315 TGCAAACCAAGTTCAACACACA 59.703 40.909 0.00 0.00 0.00 3.72
3051 3652 3.243873 TGCAAACCAAGTTCAACACACAA 60.244 39.130 0.00 0.00 0.00 3.33
3052 3653 3.743396 GCAAACCAAGTTCAACACACAAA 59.257 39.130 0.00 0.00 0.00 2.83
3053 3654 4.391523 GCAAACCAAGTTCAACACACAAAT 59.608 37.500 0.00 0.00 0.00 2.32
3054 3655 5.670835 GCAAACCAAGTTCAACACACAAATG 60.671 40.000 0.00 0.00 0.00 2.32
3055 3656 5.398603 AACCAAGTTCAACACACAAATGA 57.601 34.783 0.00 0.00 0.00 2.57
3056 3657 5.398603 ACCAAGTTCAACACACAAATGAA 57.601 34.783 0.00 0.00 0.00 2.57
3057 3658 5.788450 ACCAAGTTCAACACACAAATGAAA 58.212 33.333 0.00 0.00 35.07 2.69
3058 3659 5.868801 ACCAAGTTCAACACACAAATGAAAG 59.131 36.000 0.00 0.00 35.07 2.62
3059 3660 6.098679 CCAAGTTCAACACACAAATGAAAGA 58.901 36.000 0.00 0.00 35.07 2.52
3060 3661 6.034898 CCAAGTTCAACACACAAATGAAAGAC 59.965 38.462 0.00 0.00 35.07 3.01
3061 3662 6.266168 AGTTCAACACACAAATGAAAGACA 57.734 33.333 0.00 0.00 35.07 3.41
3062 3663 6.092748 AGTTCAACACACAAATGAAAGACAC 58.907 36.000 0.00 0.00 35.07 3.67
3063 3664 5.635417 TCAACACACAAATGAAAGACACA 57.365 34.783 0.00 0.00 0.00 3.72
3064 3665 6.206395 TCAACACACAAATGAAAGACACAT 57.794 33.333 0.00 0.00 0.00 3.21
3065 3666 6.264832 TCAACACACAAATGAAAGACACATC 58.735 36.000 0.00 0.00 0.00 3.06
3066 3667 5.833406 ACACACAAATGAAAGACACATCA 57.167 34.783 0.00 0.00 0.00 3.07
3067 3668 6.206395 ACACACAAATGAAAGACACATCAA 57.794 33.333 0.00 0.00 0.00 2.57
3068 3669 6.808829 ACACACAAATGAAAGACACATCAAT 58.191 32.000 0.00 0.00 0.00 2.57
3069 3670 6.919662 ACACACAAATGAAAGACACATCAATC 59.080 34.615 0.00 0.00 0.00 2.67
3070 3671 6.364165 CACACAAATGAAAGACACATCAATCC 59.636 38.462 0.00 0.00 0.00 3.01
3071 3672 6.266103 ACACAAATGAAAGACACATCAATCCT 59.734 34.615 0.00 0.00 0.00 3.24
3072 3673 6.805271 CACAAATGAAAGACACATCAATCCTC 59.195 38.462 0.00 0.00 0.00 3.71
3073 3674 5.808042 AATGAAAGACACATCAATCCTCG 57.192 39.130 0.00 0.00 0.00 4.63
3074 3675 4.271696 TGAAAGACACATCAATCCTCGT 57.728 40.909 0.00 0.00 0.00 4.18
3075 3676 4.641396 TGAAAGACACATCAATCCTCGTT 58.359 39.130 0.00 0.00 0.00 3.85
3076 3677 4.690748 TGAAAGACACATCAATCCTCGTTC 59.309 41.667 0.00 0.00 0.00 3.95
3077 3678 4.543590 AAGACACATCAATCCTCGTTCT 57.456 40.909 0.00 0.00 0.00 3.01
3078 3679 4.116747 AGACACATCAATCCTCGTTCTC 57.883 45.455 0.00 0.00 0.00 2.87
3079 3680 3.511540 AGACACATCAATCCTCGTTCTCA 59.488 43.478 0.00 0.00 0.00 3.27
3080 3681 4.161189 AGACACATCAATCCTCGTTCTCAT 59.839 41.667 0.00 0.00 0.00 2.90
3081 3682 4.437239 ACACATCAATCCTCGTTCTCATC 58.563 43.478 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.921670 GTTTCTGTGTGTTTGTGACTTATTTTT 58.078 29.630 0.00 0.00 0.00 1.94
30 31 8.085296 TGTTTCTGTGTGTTTGTGACTTATTTT 58.915 29.630 0.00 0.00 0.00 1.82
31 32 7.540745 GTGTTTCTGTGTGTTTGTGACTTATTT 59.459 33.333 0.00 0.00 0.00 1.40
32 33 7.027161 GTGTTTCTGTGTGTTTGTGACTTATT 58.973 34.615 0.00 0.00 0.00 1.40
33 34 6.150307 TGTGTTTCTGTGTGTTTGTGACTTAT 59.850 34.615 0.00 0.00 0.00 1.73
34 35 5.470437 TGTGTTTCTGTGTGTTTGTGACTTA 59.530 36.000 0.00 0.00 0.00 2.24
35 36 4.277174 TGTGTTTCTGTGTGTTTGTGACTT 59.723 37.500 0.00 0.00 0.00 3.01
36 37 3.818210 TGTGTTTCTGTGTGTTTGTGACT 59.182 39.130 0.00 0.00 0.00 3.41
37 38 4.153958 TGTGTTTCTGTGTGTTTGTGAC 57.846 40.909 0.00 0.00 0.00 3.67
38 39 3.190327 CCTGTGTTTCTGTGTGTTTGTGA 59.810 43.478 0.00 0.00 0.00 3.58
39 40 3.057596 ACCTGTGTTTCTGTGTGTTTGTG 60.058 43.478 0.00 0.00 0.00 3.33
40 41 3.153919 ACCTGTGTTTCTGTGTGTTTGT 58.846 40.909 0.00 0.00 0.00 2.83
41 42 3.848272 ACCTGTGTTTCTGTGTGTTTG 57.152 42.857 0.00 0.00 0.00 2.93
42 43 3.572255 ACAACCTGTGTTTCTGTGTGTTT 59.428 39.130 0.00 0.00 37.01 2.83
43 44 3.153919 ACAACCTGTGTTTCTGTGTGTT 58.846 40.909 0.00 0.00 37.01 3.32
44 45 2.747446 GACAACCTGTGTTTCTGTGTGT 59.253 45.455 0.00 0.00 41.96 3.72
45 46 3.009723 AGACAACCTGTGTTTCTGTGTG 58.990 45.455 0.00 0.00 41.96 3.82
46 47 3.350219 AGACAACCTGTGTTTCTGTGT 57.650 42.857 0.00 0.00 41.96 3.72
47 48 3.248602 GCTAGACAACCTGTGTTTCTGTG 59.751 47.826 0.00 0.00 41.96 3.66
48 49 3.467803 GCTAGACAACCTGTGTTTCTGT 58.532 45.455 0.00 0.00 41.96 3.41
49 50 2.808543 GGCTAGACAACCTGTGTTTCTG 59.191 50.000 0.00 0.00 41.96 3.02
50 51 2.548067 CGGCTAGACAACCTGTGTTTCT 60.548 50.000 0.00 0.00 41.96 2.52
51 52 1.798813 CGGCTAGACAACCTGTGTTTC 59.201 52.381 0.00 0.00 41.96 2.78
52 53 1.542547 CCGGCTAGACAACCTGTGTTT 60.543 52.381 0.00 0.00 41.96 2.83
53 54 0.034896 CCGGCTAGACAACCTGTGTT 59.965 55.000 0.00 0.00 41.96 3.32
54 55 0.830444 TCCGGCTAGACAACCTGTGT 60.830 55.000 0.00 0.00 45.74 3.72
55 56 0.108615 CTCCGGCTAGACAACCTGTG 60.109 60.000 0.00 0.00 0.00 3.66
56 57 1.258445 CCTCCGGCTAGACAACCTGT 61.258 60.000 0.00 0.00 0.00 4.00
57 58 0.970937 TCCTCCGGCTAGACAACCTG 60.971 60.000 0.00 0.00 0.00 4.00
58 59 0.252103 TTCCTCCGGCTAGACAACCT 60.252 55.000 0.00 0.00 0.00 3.50
59 60 0.611714 TTTCCTCCGGCTAGACAACC 59.388 55.000 0.00 0.00 0.00 3.77
60 61 2.467566 TTTTCCTCCGGCTAGACAAC 57.532 50.000 0.00 0.00 0.00 3.32
61 62 4.028131 TCTATTTTCCTCCGGCTAGACAA 58.972 43.478 0.00 0.00 0.00 3.18
62 63 3.383825 GTCTATTTTCCTCCGGCTAGACA 59.616 47.826 0.00 0.00 36.62 3.41
63 64 3.383825 TGTCTATTTTCCTCCGGCTAGAC 59.616 47.826 0.00 5.18 36.96 2.59
64 65 3.638860 TGTCTATTTTCCTCCGGCTAGA 58.361 45.455 0.00 0.00 0.00 2.43
65 66 4.402056 TTGTCTATTTTCCTCCGGCTAG 57.598 45.455 0.00 0.00 0.00 3.42
66 67 4.829872 TTTGTCTATTTTCCTCCGGCTA 57.170 40.909 0.00 0.00 0.00 3.93
67 68 3.713826 TTTGTCTATTTTCCTCCGGCT 57.286 42.857 0.00 0.00 0.00 5.52
68 69 4.457949 TCTTTTTGTCTATTTTCCTCCGGC 59.542 41.667 0.00 0.00 0.00 6.13
69 70 6.206829 AGTTCTTTTTGTCTATTTTCCTCCGG 59.793 38.462 0.00 0.00 0.00 5.14
70 71 7.078228 CAGTTCTTTTTGTCTATTTTCCTCCG 58.922 38.462 0.00 0.00 0.00 4.63
71 72 7.014326 ACCAGTTCTTTTTGTCTATTTTCCTCC 59.986 37.037 0.00 0.00 0.00 4.30
72 73 7.941919 ACCAGTTCTTTTTGTCTATTTTCCTC 58.058 34.615 0.00 0.00 0.00 3.71
73 74 7.898014 ACCAGTTCTTTTTGTCTATTTTCCT 57.102 32.000 0.00 0.00 0.00 3.36
81 82 8.581578 TGTTCTTTTAACCAGTTCTTTTTGTCT 58.418 29.630 0.00 0.00 0.00 3.41
82 83 8.751302 TGTTCTTTTAACCAGTTCTTTTTGTC 57.249 30.769 0.00 0.00 0.00 3.18
83 84 7.817478 CCTGTTCTTTTAACCAGTTCTTTTTGT 59.183 33.333 0.00 0.00 0.00 2.83
84 85 8.032451 TCCTGTTCTTTTAACCAGTTCTTTTTG 58.968 33.333 0.00 0.00 0.00 2.44
85 86 8.033038 GTCCTGTTCTTTTAACCAGTTCTTTTT 58.967 33.333 0.00 0.00 0.00 1.94
86 87 7.396339 AGTCCTGTTCTTTTAACCAGTTCTTTT 59.604 33.333 0.00 0.00 0.00 2.27
87 88 6.890268 AGTCCTGTTCTTTTAACCAGTTCTTT 59.110 34.615 0.00 0.00 0.00 2.52
88 89 6.424032 AGTCCTGTTCTTTTAACCAGTTCTT 58.576 36.000 0.00 0.00 0.00 2.52
89 90 6.002653 AGTCCTGTTCTTTTAACCAGTTCT 57.997 37.500 0.00 0.00 0.00 3.01
90 91 6.204301 GGTAGTCCTGTTCTTTTAACCAGTTC 59.796 42.308 0.00 0.00 0.00 3.01
91 92 6.060136 GGTAGTCCTGTTCTTTTAACCAGTT 58.940 40.000 0.00 0.00 0.00 3.16
92 93 5.455755 GGGTAGTCCTGTTCTTTTAACCAGT 60.456 44.000 0.00 0.00 0.00 4.00
93 94 5.001874 GGGTAGTCCTGTTCTTTTAACCAG 58.998 45.833 0.00 0.00 0.00 4.00
94 95 4.202493 GGGGTAGTCCTGTTCTTTTAACCA 60.202 45.833 0.00 0.00 35.33 3.67
95 96 4.330250 GGGGTAGTCCTGTTCTTTTAACC 58.670 47.826 0.00 0.00 35.33 2.85
96 97 4.042560 AGGGGGTAGTCCTGTTCTTTTAAC 59.957 45.833 0.00 0.00 32.53 2.01
97 98 4.245308 AGGGGGTAGTCCTGTTCTTTTAA 58.755 43.478 0.00 0.00 32.53 1.52
98 99 3.878086 AGGGGGTAGTCCTGTTCTTTTA 58.122 45.455 0.00 0.00 32.53 1.52
99 100 2.714808 AGGGGGTAGTCCTGTTCTTTT 58.285 47.619 0.00 0.00 32.53 2.27
100 101 2.435203 AGGGGGTAGTCCTGTTCTTT 57.565 50.000 0.00 0.00 32.53 2.52
101 102 2.157989 AGAAGGGGGTAGTCCTGTTCTT 60.158 50.000 0.00 0.00 35.44 2.52
102 103 1.437547 AGAAGGGGGTAGTCCTGTTCT 59.562 52.381 0.00 0.00 34.70 3.01
103 104 1.954035 AGAAGGGGGTAGTCCTGTTC 58.046 55.000 0.00 0.00 34.34 3.18
104 105 2.435203 AAGAAGGGGGTAGTCCTGTT 57.565 50.000 0.00 0.00 34.34 3.16
105 106 2.435203 AAAGAAGGGGGTAGTCCTGT 57.565 50.000 0.00 0.00 34.34 4.00
106 107 3.808834 AAAAAGAAGGGGGTAGTCCTG 57.191 47.619 0.00 0.00 34.34 3.86
129 130 4.081406 TCAGGTGGATTATGGCATTATGC 58.919 43.478 8.93 8.93 44.08 3.14
130 131 6.294899 CCTTTCAGGTGGATTATGGCATTATG 60.295 42.308 4.78 0.00 0.00 1.90
131 132 5.776716 CCTTTCAGGTGGATTATGGCATTAT 59.223 40.000 4.78 0.72 0.00 1.28
132 133 5.139727 CCTTTCAGGTGGATTATGGCATTA 58.860 41.667 4.78 0.00 0.00 1.90
133 134 3.962718 CCTTTCAGGTGGATTATGGCATT 59.037 43.478 4.78 0.00 0.00 3.56
134 135 3.569491 CCTTTCAGGTGGATTATGGCAT 58.431 45.455 4.88 4.88 0.00 4.40
135 136 2.949963 GCCTTTCAGGTGGATTATGGCA 60.950 50.000 0.00 0.00 37.80 4.92
136 137 1.683385 GCCTTTCAGGTGGATTATGGC 59.317 52.381 0.00 0.00 37.80 4.40
137 138 3.303351 AGCCTTTCAGGTGGATTATGG 57.697 47.619 0.00 0.00 37.80 2.74
138 139 3.817647 GCTAGCCTTTCAGGTGGATTATG 59.182 47.826 2.29 0.00 37.80 1.90
139 140 3.459598 TGCTAGCCTTTCAGGTGGATTAT 59.540 43.478 13.29 0.00 37.80 1.28
140 141 2.843730 TGCTAGCCTTTCAGGTGGATTA 59.156 45.455 13.29 0.00 37.80 1.75
141 142 1.635487 TGCTAGCCTTTCAGGTGGATT 59.365 47.619 13.29 0.00 37.80 3.01
142 143 1.289160 TGCTAGCCTTTCAGGTGGAT 58.711 50.000 13.29 0.00 37.80 3.41
143 144 1.289160 ATGCTAGCCTTTCAGGTGGA 58.711 50.000 13.29 0.00 37.80 4.02
144 145 2.435805 TCTATGCTAGCCTTTCAGGTGG 59.564 50.000 13.29 0.00 37.80 4.61
145 146 3.494048 CCTCTATGCTAGCCTTTCAGGTG 60.494 52.174 13.29 0.00 37.80 4.00
146 147 2.703007 CCTCTATGCTAGCCTTTCAGGT 59.297 50.000 13.29 0.00 37.80 4.00
147 148 2.038295 CCCTCTATGCTAGCCTTTCAGG 59.962 54.545 13.29 10.65 38.80 3.86
148 149 2.549778 GCCCTCTATGCTAGCCTTTCAG 60.550 54.545 13.29 1.61 0.00 3.02
149 150 1.417890 GCCCTCTATGCTAGCCTTTCA 59.582 52.381 13.29 0.00 0.00 2.69
150 151 1.417890 TGCCCTCTATGCTAGCCTTTC 59.582 52.381 13.29 0.00 0.00 2.62
172 173 1.741770 GCGTAGTGCTCCCCTGTTG 60.742 63.158 0.00 0.00 41.73 3.33
189 190 5.959618 AGAAGGTATAGGTTGTGTTTTGC 57.040 39.130 0.00 0.00 0.00 3.68
242 243 5.559770 TCTCAGTTTGCTTAATGGTGATGA 58.440 37.500 0.00 0.00 0.00 2.92
247 248 3.445096 GGCATCTCAGTTTGCTTAATGGT 59.555 43.478 3.00 0.00 38.88 3.55
255 256 2.409948 ACCTAGGCATCTCAGTTTGC 57.590 50.000 9.30 0.00 38.14 3.68
257 258 3.185455 AGGAACCTAGGCATCTCAGTTT 58.815 45.455 9.30 0.00 0.00 2.66
280 281 2.445427 CAGGTATGCACATTCCACCAA 58.555 47.619 8.73 0.00 31.47 3.67
297 298 0.618981 GTCCAGGACCTAAACCCAGG 59.381 60.000 8.65 0.00 41.87 4.45
298 299 1.657804 AGTCCAGGACCTAAACCCAG 58.342 55.000 16.72 0.00 32.18 4.45
299 300 1.702957 CAAGTCCAGGACCTAAACCCA 59.297 52.381 16.72 0.00 32.18 4.51
305 306 1.202964 TCGTGTCAAGTCCAGGACCTA 60.203 52.381 16.72 0.00 32.18 3.08
307 308 0.038159 CTCGTGTCAAGTCCAGGACC 60.038 60.000 16.72 1.07 32.18 4.46
313 314 0.663568 CGACCACTCGTGTCAAGTCC 60.664 60.000 0.00 0.00 35.00 3.85
319 320 0.865769 AAAATGCGACCACTCGTGTC 59.134 50.000 0.00 0.00 42.33 3.67
324 325 4.965119 ATTTAGGAAAATGCGACCACTC 57.035 40.909 0.00 0.00 33.97 3.51
325 326 5.722021 AAATTTAGGAAAATGCGACCACT 57.278 34.783 0.00 0.00 35.46 4.00
327 328 7.093727 TGGAATAAATTTAGGAAAATGCGACCA 60.094 33.333 3.94 0.00 35.46 4.02
337 338 8.875168 TCAAAAAGCCTGGAATAAATTTAGGAA 58.125 29.630 7.94 0.00 30.53 3.36
342 343 8.156165 TGTCATCAAAAAGCCTGGAATAAATTT 58.844 29.630 0.00 0.00 0.00 1.82
351 352 4.449743 CACAAATGTCATCAAAAAGCCTGG 59.550 41.667 0.00 0.00 0.00 4.45
354 355 3.187022 GCCACAAATGTCATCAAAAAGCC 59.813 43.478 0.00 0.00 0.00 4.35
361 362 1.594194 GCCCGCCACAAATGTCATCA 61.594 55.000 0.00 0.00 0.00 3.07
362 363 1.139520 GCCCGCCACAAATGTCATC 59.860 57.895 0.00 0.00 0.00 2.92
363 364 2.350458 GGCCCGCCACAAATGTCAT 61.350 57.895 0.00 0.00 35.81 3.06
364 365 2.988684 GGCCCGCCACAAATGTCA 60.989 61.111 0.00 0.00 35.81 3.58
367 368 4.440127 GCAGGCCCGCCACAAATG 62.440 66.667 8.74 0.00 38.92 2.32
378 379 1.042559 AGAGACTGAGCTAGCAGGCC 61.043 60.000 18.83 0.00 45.27 5.19
386 387 1.005332 TGAGCACCTAGAGACTGAGCT 59.995 52.381 0.00 0.00 0.00 4.09
408 412 2.493675 ACACGCATGTACACTCTCTCAT 59.506 45.455 0.00 0.00 37.26 2.90
425 429 2.875933 ACAGTCACCCAATAAACACACG 59.124 45.455 0.00 0.00 0.00 4.49
459 464 5.049267 ACACACCACAAACGTATAAATCCAC 60.049 40.000 0.00 0.00 0.00 4.02
462 467 7.357303 AGAAACACACCACAAACGTATAAATC 58.643 34.615 0.00 0.00 0.00 2.17
465 470 5.816258 TGAGAAACACACCACAAACGTATAA 59.184 36.000 0.00 0.00 0.00 0.98
467 472 4.193090 TGAGAAACACACCACAAACGTAT 58.807 39.130 0.00 0.00 0.00 3.06
482 487 7.209475 TGGTGAGGATTTTCATTTTGAGAAAC 58.791 34.615 0.00 0.00 34.94 2.78
569 574 9.959721 AGTACAAATCAAACAAGGTCTATGTAT 57.040 29.630 0.00 0.00 0.00 2.29
571 576 9.436957 CTAGTACAAATCAAACAAGGTCTATGT 57.563 33.333 0.00 0.00 0.00 2.29
572 577 8.883731 CCTAGTACAAATCAAACAAGGTCTATG 58.116 37.037 0.00 0.00 0.00 2.23
672 756 4.463539 TGCATGGCAAGTTGTCATAGAAAT 59.536 37.500 21.99 0.00 41.37 2.17
702 786 9.364989 CTTCATAAGAAAAACTGACCACAAAAA 57.635 29.630 0.00 0.00 32.35 1.94
719 803 5.106357 TGCGCAACATTTTAGCTTCATAAGA 60.106 36.000 8.16 0.00 0.00 2.10
738 872 5.890110 TTTTTATTTTCGAACATTGCGCA 57.110 30.435 5.66 5.66 0.00 6.09
739 873 6.892430 GGTATTTTTATTTTCGAACATTGCGC 59.108 34.615 0.00 0.00 0.00 6.09
748 883 9.413048 AGAAATTTGCGGTATTTTTATTTTCGA 57.587 25.926 0.00 0.00 0.00 3.71
754 889 9.868277 TGAATCAGAAATTTGCGGTATTTTTAT 57.132 25.926 0.00 0.00 0.00 1.40
763 901 5.221880 TGACTTTGAATCAGAAATTTGCGG 58.778 37.500 0.00 0.00 0.00 5.69
789 927 8.629158 CACTAGAGAGTAATCAGCAGAGTAAAT 58.371 37.037 0.00 0.00 33.32 1.40
792 930 6.058833 CCACTAGAGAGTAATCAGCAGAGTA 58.941 44.000 0.00 0.00 33.32 2.59
796 934 5.126222 TCAACCACTAGAGAGTAATCAGCAG 59.874 44.000 0.00 0.00 33.32 4.24
800 938 5.330233 TGGTCAACCACTAGAGAGTAATCA 58.670 41.667 0.00 0.00 42.01 2.57
811 949 6.115446 GAGAATCATGATTGGTCAACCACTA 58.885 40.000 25.37 0.00 39.91 2.74
851 989 0.897621 CATGAAGTTTCCCCTTGGCC 59.102 55.000 0.00 0.00 0.00 5.36
854 992 5.256474 ACTACATCATGAAGTTTCCCCTTG 58.744 41.667 9.14 0.00 0.00 3.61
874 1012 9.715121 CCTGTTAAAATCCACTAAGTTGTACTA 57.285 33.333 0.00 0.00 0.00 1.82
875 1013 7.664318 CCCTGTTAAAATCCACTAAGTTGTACT 59.336 37.037 0.00 0.00 0.00 2.73
879 1017 7.368059 GTTCCCTGTTAAAATCCACTAAGTTG 58.632 38.462 0.00 0.00 0.00 3.16
915 1053 7.939784 AGGAAATTGGTAGGAAGTTATGTTC 57.060 36.000 0.00 0.00 0.00 3.18
959 1099 9.109393 TCAAGTTGATGATGTATAAGGCTTTAC 57.891 33.333 4.45 8.64 0.00 2.01
1056 1522 1.079127 CCAGACTGGTAAGCGGTGG 60.079 63.158 13.84 0.00 31.35 4.61
1058 1529 1.207329 GATTCCAGACTGGTAAGCGGT 59.793 52.381 21.06 0.00 39.03 5.68
1060 1531 2.969628 AGATTCCAGACTGGTAAGCG 57.030 50.000 21.06 0.00 39.03 4.68
1069 1540 4.340950 AGCTAGCTTGAGTAGATTCCAGAC 59.659 45.833 12.68 0.00 0.00 3.51
1070 1541 4.541705 AGCTAGCTTGAGTAGATTCCAGA 58.458 43.478 12.68 0.00 0.00 3.86
1543 2036 1.633774 ACTCGTTCATGACCCAGTCT 58.366 50.000 0.00 0.00 33.15 3.24
1788 2309 3.792047 CATGGTGCTGCACGACGG 61.792 66.667 24.86 14.03 34.83 4.79
1789 2310 3.792047 CCATGGTGCTGCACGACG 61.792 66.667 24.86 14.94 34.83 5.12
1790 2311 4.107051 GCCATGGTGCTGCACGAC 62.107 66.667 24.86 13.61 34.83 4.34
1793 2314 4.060038 GTGGCCATGGTGCTGCAC 62.060 66.667 24.02 24.02 0.00 4.57
1796 2317 3.376078 GTGGTGGCCATGGTGCTG 61.376 66.667 9.72 0.00 35.28 4.41
1896 2423 2.124403 GCATCCACTCCAGCCCAG 60.124 66.667 0.00 0.00 0.00 4.45
1897 2424 2.934932 TGCATCCACTCCAGCCCA 60.935 61.111 0.00 0.00 0.00 5.36
2046 2581 4.794311 TTGAGATGGCTCCATGGATTAA 57.206 40.909 16.63 3.72 40.55 1.40
2077 2633 6.382869 AATCTGCTGGCTCATGTATTTTAC 57.617 37.500 0.00 0.00 0.00 2.01
2088 2644 2.064762 CGCTACATAATCTGCTGGCTC 58.935 52.381 0.00 0.00 0.00 4.70
2098 2654 5.292765 CAGATTCAGTGACCGCTACATAAT 58.707 41.667 0.00 0.00 0.00 1.28
2099 2656 4.441495 CCAGATTCAGTGACCGCTACATAA 60.441 45.833 0.00 0.00 0.00 1.90
2112 2669 3.508793 CCATTTCTGTTGCCAGATTCAGT 59.491 43.478 0.00 0.00 46.80 3.41
2113 2670 3.760151 TCCATTTCTGTTGCCAGATTCAG 59.240 43.478 0.00 0.00 46.80 3.02
2114 2671 3.760151 CTCCATTTCTGTTGCCAGATTCA 59.240 43.478 0.00 0.00 46.80 2.57
2165 2741 8.997621 TCCTTTTGTCTAGTTGTGTCATATAC 57.002 34.615 0.00 0.00 0.00 1.47
2167 2743 8.950210 CATTCCTTTTGTCTAGTTGTGTCATAT 58.050 33.333 0.00 0.00 0.00 1.78
2203 2780 6.790319 TCCTCTATCTGTGCTATACATGGTA 58.210 40.000 0.00 0.00 38.92 3.25
2215 2792 5.649395 TGAAAATTTGGCTCCTCTATCTGTG 59.351 40.000 0.00 0.00 0.00 3.66
2256 2833 5.221481 TGGACAAACTCCATTGAACTACGTA 60.221 40.000 0.00 0.00 44.99 3.57
2257 2834 4.062991 GGACAAACTCCATTGAACTACGT 58.937 43.478 0.00 0.00 39.21 3.57
2258 2835 4.062293 TGGACAAACTCCATTGAACTACG 58.938 43.478 0.00 0.00 44.99 3.51
2305 2885 1.227999 AACACACCTTGCACCGATCG 61.228 55.000 8.51 8.51 0.00 3.69
2353 2938 5.006552 GTGTGAATTTGGTGTGAATTTGGTG 59.993 40.000 0.00 0.00 0.00 4.17
2354 2939 5.115480 GTGTGAATTTGGTGTGAATTTGGT 58.885 37.500 0.00 0.00 0.00 3.67
2356 2941 5.114780 TGGTGTGAATTTGGTGTGAATTTG 58.885 37.500 0.00 0.00 0.00 2.32
2357 2942 5.350504 TGGTGTGAATTTGGTGTGAATTT 57.649 34.783 0.00 0.00 0.00 1.82
2358 2943 5.350504 TTGGTGTGAATTTGGTGTGAATT 57.649 34.783 0.00 0.00 0.00 2.17
2359 2944 5.350504 TTTGGTGTGAATTTGGTGTGAAT 57.649 34.783 0.00 0.00 0.00 2.57
2360 2945 4.808414 TTTGGTGTGAATTTGGTGTGAA 57.192 36.364 0.00 0.00 0.00 3.18
2361 2946 5.105187 TGAATTTGGTGTGAATTTGGTGTGA 60.105 36.000 0.00 0.00 0.00 3.58
2362 2947 5.114780 TGAATTTGGTGTGAATTTGGTGTG 58.885 37.500 0.00 0.00 0.00 3.82
2363 2948 5.350504 TGAATTTGGTGTGAATTTGGTGT 57.649 34.783 0.00 0.00 0.00 4.16
2364 2949 7.377398 TCTATGAATTTGGTGTGAATTTGGTG 58.623 34.615 0.00 0.00 0.00 4.17
2365 2950 7.537596 TCTATGAATTTGGTGTGAATTTGGT 57.462 32.000 0.00 0.00 0.00 3.67
2366 2951 9.090692 GAATCTATGAATTTGGTGTGAATTTGG 57.909 33.333 0.00 0.00 0.00 3.28
2367 2952 8.800972 CGAATCTATGAATTTGGTGTGAATTTG 58.199 33.333 0.00 0.00 0.00 2.32
2368 2953 8.739039 TCGAATCTATGAATTTGGTGTGAATTT 58.261 29.630 0.00 0.00 0.00 1.82
2369 2954 8.279970 TCGAATCTATGAATTTGGTGTGAATT 57.720 30.769 0.00 0.00 0.00 2.17
2370 2955 7.864108 TCGAATCTATGAATTTGGTGTGAAT 57.136 32.000 0.00 0.00 0.00 2.57
2371 2956 7.201723 CCATCGAATCTATGAATTTGGTGTGAA 60.202 37.037 0.00 0.00 31.66 3.18
2372 2957 6.260714 CCATCGAATCTATGAATTTGGTGTGA 59.739 38.462 0.00 0.00 31.66 3.58
2373 2958 6.260714 TCCATCGAATCTATGAATTTGGTGTG 59.739 38.462 0.00 0.00 31.66 3.82
2374 2959 6.356556 TCCATCGAATCTATGAATTTGGTGT 58.643 36.000 0.00 0.00 31.66 4.16
2375 2960 6.866010 TCCATCGAATCTATGAATTTGGTG 57.134 37.500 0.00 0.00 32.87 4.17
2376 2961 6.072286 GCATCCATCGAATCTATGAATTTGGT 60.072 38.462 0.00 0.00 0.00 3.67
2377 2962 6.072342 TGCATCCATCGAATCTATGAATTTGG 60.072 38.462 0.00 0.00 0.00 3.28
2378 2963 6.905578 TGCATCCATCGAATCTATGAATTTG 58.094 36.000 0.00 0.00 0.00 2.32
2379 2964 7.698506 ATGCATCCATCGAATCTATGAATTT 57.301 32.000 0.00 0.00 0.00 1.82
2380 2965 8.797350 TTATGCATCCATCGAATCTATGAATT 57.203 30.769 0.19 0.00 32.85 2.17
2381 2966 8.837389 CATTATGCATCCATCGAATCTATGAAT 58.163 33.333 0.19 0.00 32.85 2.57
2382 2967 7.281549 CCATTATGCATCCATCGAATCTATGAA 59.718 37.037 0.19 0.00 32.85 2.57
2383 2968 6.764560 CCATTATGCATCCATCGAATCTATGA 59.235 38.462 0.19 0.00 32.85 2.15
2384 2969 6.764560 TCCATTATGCATCCATCGAATCTATG 59.235 38.462 0.19 0.00 32.85 2.23
2385 2970 6.892485 TCCATTATGCATCCATCGAATCTAT 58.108 36.000 0.19 0.00 32.85 1.98
2386 2971 6.298441 TCCATTATGCATCCATCGAATCTA 57.702 37.500 0.19 0.00 32.85 1.98
2387 2972 5.169992 TCCATTATGCATCCATCGAATCT 57.830 39.130 0.19 0.00 32.85 2.40
2388 2973 6.263344 CAATCCATTATGCATCCATCGAATC 58.737 40.000 0.19 0.00 32.85 2.52
2389 2974 5.126545 CCAATCCATTATGCATCCATCGAAT 59.873 40.000 0.19 0.00 32.85 3.34
2390 2975 4.460034 CCAATCCATTATGCATCCATCGAA 59.540 41.667 0.19 0.00 32.85 3.71
2391 2976 4.011698 CCAATCCATTATGCATCCATCGA 58.988 43.478 0.19 0.00 32.85 3.59
2392 2977 3.129813 CCCAATCCATTATGCATCCATCG 59.870 47.826 0.19 0.00 32.85 3.84
2393 2978 3.118884 GCCCAATCCATTATGCATCCATC 60.119 47.826 0.19 0.00 32.85 3.51
2394 2979 2.835764 GCCCAATCCATTATGCATCCAT 59.164 45.455 0.19 0.00 35.44 3.41
2395 2980 2.250031 GCCCAATCCATTATGCATCCA 58.750 47.619 0.19 0.00 0.00 3.41
2396 2981 2.250031 TGCCCAATCCATTATGCATCC 58.750 47.619 0.19 0.00 0.00 3.51
2397 2982 4.020928 TGAATGCCCAATCCATTATGCATC 60.021 41.667 0.19 0.00 36.07 3.91
2398 2983 3.904965 TGAATGCCCAATCCATTATGCAT 59.095 39.130 3.79 3.79 37.61 3.96
2399 2984 3.069872 GTGAATGCCCAATCCATTATGCA 59.930 43.478 0.00 0.00 33.34 3.96
2400 2985 3.069872 TGTGAATGCCCAATCCATTATGC 59.930 43.478 0.00 0.00 33.34 3.14
2401 2986 4.501915 GGTGTGAATGCCCAATCCATTATG 60.502 45.833 0.00 0.00 33.34 1.90
2402 2987 3.642848 GGTGTGAATGCCCAATCCATTAT 59.357 43.478 0.00 0.00 33.34 1.28
2407 2992 1.265236 TTGGTGTGAATGCCCAATCC 58.735 50.000 0.00 0.00 33.43 3.01
2434 3019 1.226746 CGTCAGAAAAAGCTCGGGTT 58.773 50.000 0.00 0.00 0.00 4.11
2448 3033 1.459450 CCACCAATAAACCCCGTCAG 58.541 55.000 0.00 0.00 0.00 3.51
2452 3037 2.411504 CGCCCACCAATAAACCCCG 61.412 63.158 0.00 0.00 0.00 5.73
2543 3141 7.392113 ACTGATCAACCCGTTGTATTGAAAATA 59.608 33.333 7.42 0.00 41.16 1.40
2549 3150 6.677781 AATACTGATCAACCCGTTGTATTG 57.322 37.500 11.39 1.11 41.16 1.90
2557 3158 6.494842 CCAAACATAAATACTGATCAACCCG 58.505 40.000 0.00 0.00 0.00 5.28
2562 3163 5.765510 AGGGCCAAACATAAATACTGATCA 58.234 37.500 6.18 0.00 0.00 2.92
2658 3259 3.681593 TCCCTCGTTGTATTGAAAAGGG 58.318 45.455 0.00 0.00 42.81 3.95
2693 3294 2.305635 TGTTGGAGATGCTCTTAGGCAA 59.694 45.455 0.04 0.00 45.68 4.52
2701 3302 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
2702 3303 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
2703 3304 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
2704 3305 3.869272 GCGCGGCTGTTGGAGATG 61.869 66.667 8.83 0.00 0.00 2.90
2705 3306 3.612247 AAGCGCGGCTGTTGGAGAT 62.612 57.895 8.83 0.00 39.62 2.75
2706 3307 4.314440 AAGCGCGGCTGTTGGAGA 62.314 61.111 8.83 0.00 39.62 3.71
2707 3308 3.793144 GAAGCGCGGCTGTTGGAG 61.793 66.667 8.83 0.00 39.62 3.86
2727 3328 0.247934 ACTAATTTTTAGCGCGCGGC 60.248 50.000 33.06 23.14 44.05 6.53
2728 3329 2.168201 AACTAATTTTTAGCGCGCGG 57.832 45.000 33.06 13.66 0.00 6.46
2729 3330 2.283672 GCAAACTAATTTTTAGCGCGCG 60.284 45.455 28.44 28.44 0.00 6.86
2730 3331 2.027569 GGCAAACTAATTTTTAGCGCGC 59.972 45.455 26.66 26.66 0.00 6.86
2731 3332 2.275253 CGGCAAACTAATTTTTAGCGCG 59.725 45.455 0.00 0.00 0.00 6.86
2732 3333 3.058913 CACGGCAAACTAATTTTTAGCGC 59.941 43.478 0.00 0.00 0.00 5.92
2733 3334 3.058913 GCACGGCAAACTAATTTTTAGCG 59.941 43.478 0.00 0.00 0.00 4.26
2734 3335 3.058913 CGCACGGCAAACTAATTTTTAGC 59.941 43.478 0.00 0.00 0.00 3.09
2735 3336 3.058913 GCGCACGGCAAACTAATTTTTAG 59.941 43.478 0.30 0.00 42.87 1.85
2736 3337 2.981140 GCGCACGGCAAACTAATTTTTA 59.019 40.909 0.30 0.00 42.87 1.52
2737 3338 1.790043 GCGCACGGCAAACTAATTTTT 59.210 42.857 0.30 0.00 42.87 1.94
2738 3339 1.414378 GCGCACGGCAAACTAATTTT 58.586 45.000 0.30 0.00 42.87 1.82
2739 3340 0.388006 GGCGCACGGCAAACTAATTT 60.388 50.000 10.83 0.00 46.16 1.82
2740 3341 1.211709 GGCGCACGGCAAACTAATT 59.788 52.632 10.83 0.00 46.16 1.40
2741 3342 2.874751 GGCGCACGGCAAACTAAT 59.125 55.556 10.83 0.00 46.16 1.73
2742 3343 3.718097 CGGCGCACGGCAAACTAA 61.718 61.111 17.00 0.00 46.16 2.24
2753 3354 4.595538 AACCAGACGAACGGCGCA 62.596 61.111 10.83 0.00 46.04 6.09
2754 3355 2.888998 AAAACCAGACGAACGGCGC 61.889 57.895 6.90 0.00 46.04 6.53
2756 3357 1.370051 GCAAAACCAGACGAACGGC 60.370 57.895 0.00 0.00 0.00 5.68
2757 3358 1.083015 CGCAAAACCAGACGAACGG 60.083 57.895 0.00 0.00 0.00 4.44
2758 3359 0.653323 CACGCAAAACCAGACGAACG 60.653 55.000 0.00 0.00 0.00 3.95
2759 3360 0.316689 CCACGCAAAACCAGACGAAC 60.317 55.000 0.00 0.00 0.00 3.95
2760 3361 2.018544 CCACGCAAAACCAGACGAA 58.981 52.632 0.00 0.00 0.00 3.85
2761 3362 2.539338 GCCACGCAAAACCAGACGA 61.539 57.895 0.00 0.00 0.00 4.20
2762 3363 2.051345 GCCACGCAAAACCAGACG 60.051 61.111 0.00 0.00 0.00 4.18
2763 3364 2.335011 GGCCACGCAAAACCAGAC 59.665 61.111 0.00 0.00 0.00 3.51
2764 3365 2.124109 TGGCCACGCAAAACCAGA 60.124 55.556 0.00 0.00 0.00 3.86
2765 3366 2.027460 GTGGCCACGCAAAACCAG 59.973 61.111 22.49 0.00 31.46 4.00
2766 3367 3.532155 GGTGGCCACGCAAAACCA 61.532 61.111 29.08 0.00 31.43 3.67
2767 3368 3.498401 CTGGTGGCCACGCAAAACC 62.498 63.158 29.08 14.47 0.00 3.27
2768 3369 2.027460 CTGGTGGCCACGCAAAAC 59.973 61.111 29.08 14.79 0.00 2.43
2769 3370 2.441164 ACTGGTGGCCACGCAAAA 60.441 55.556 29.08 11.22 0.00 2.44
2770 3371 3.215568 CACTGGTGGCCACGCAAA 61.216 61.111 29.08 13.69 0.00 3.68
2783 3384 3.664495 CTGTTGGAGCCAGCACTG 58.336 61.111 1.65 0.00 33.73 3.66
2792 3393 1.573829 TTTTAGCGCGGCTGTTGGAG 61.574 55.000 8.83 0.00 40.10 3.86
2793 3394 0.958382 ATTTTAGCGCGGCTGTTGGA 60.958 50.000 8.83 0.00 40.10 3.53
2794 3395 0.798009 CATTTTAGCGCGGCTGTTGG 60.798 55.000 8.83 0.00 40.10 3.77
2795 3396 1.405469 GCATTTTAGCGCGGCTGTTG 61.405 55.000 8.83 0.00 40.10 3.33
2796 3397 1.154035 GCATTTTAGCGCGGCTGTT 60.154 52.632 8.83 0.00 40.10 3.16
2797 3398 2.257286 CTGCATTTTAGCGCGGCTGT 62.257 55.000 8.83 0.00 40.10 4.40
2798 3399 1.584483 CTGCATTTTAGCGCGGCTG 60.584 57.895 8.83 0.53 40.10 4.85
2799 3400 2.764314 CCTGCATTTTAGCGCGGCT 61.764 57.895 8.83 8.38 43.41 5.52
2800 3401 2.278142 CCTGCATTTTAGCGCGGC 60.278 61.111 8.83 0.29 37.31 6.53
2801 3402 2.408835 CCCTGCATTTTAGCGCGG 59.591 61.111 8.83 0.00 37.31 6.46
2802 3403 2.278142 GCCCTGCATTTTAGCGCG 60.278 61.111 0.00 0.00 37.31 6.86
2803 3404 2.278142 CGCCCTGCATTTTAGCGC 60.278 61.111 0.00 0.00 40.35 5.92
2821 3422 3.701530 TTGCTGAAGCGACGCGTG 61.702 61.111 20.70 10.73 45.83 5.34
2822 3423 3.702555 GTTGCTGAAGCGACGCGT 61.703 61.111 13.85 13.85 44.53 6.01
2827 3428 0.737804 TTTGCAAGTTGCTGAAGCGA 59.262 45.000 27.17 3.49 45.31 4.93
2828 3429 1.558741 TTTTGCAAGTTGCTGAAGCG 58.441 45.000 27.17 0.00 45.31 4.68
2845 3446 2.573167 CGCGCGCGCTACATTTTT 60.573 55.556 45.97 0.00 39.32 1.94
2846 3447 3.483665 TCGCGCGCGCTACATTTT 61.484 55.556 45.97 0.00 39.59 1.82
2847 3448 4.204891 GTCGCGCGCGCTACATTT 62.205 61.111 42.32 0.00 36.89 2.32
2864 3465 3.976497 TATATGCAATGCCCCGGCGAG 62.976 57.143 9.30 0.00 45.51 5.03
2865 3466 2.118233 TATATGCAATGCCCCGGCGA 62.118 55.000 9.30 0.00 45.51 5.54
2866 3467 1.031571 ATATATGCAATGCCCCGGCG 61.032 55.000 1.53 0.00 45.51 6.46
2867 3468 0.457035 CATATATGCAATGCCCCGGC 59.543 55.000 1.53 0.00 42.35 6.13
2868 3469 1.105457 CCATATATGCAATGCCCCGG 58.895 55.000 7.24 0.00 0.00 5.73
2869 3470 0.457035 GCCATATATGCAATGCCCCG 59.543 55.000 7.24 0.00 0.00 5.73
2870 3471 1.559368 TGCCATATATGCAATGCCCC 58.441 50.000 7.24 0.00 35.40 5.80
2871 3472 3.899052 AATGCCATATATGCAATGCCC 57.101 42.857 7.24 0.00 42.92 5.36
2872 3473 4.823157 TCAAATGCCATATATGCAATGCC 58.177 39.130 7.24 0.00 42.92 4.40
2873 3474 5.697178 TGTTCAAATGCCATATATGCAATGC 59.303 36.000 7.24 0.00 42.92 3.56
2874 3475 6.702282 TGTGTTCAAATGCCATATATGCAATG 59.298 34.615 7.24 11.57 42.92 2.82
2875 3476 6.818233 TGTGTTCAAATGCCATATATGCAAT 58.182 32.000 7.24 0.28 42.92 3.56
2876 3477 6.218108 TGTGTTCAAATGCCATATATGCAA 57.782 33.333 7.24 0.00 42.92 4.08
2877 3478 5.848833 TGTGTTCAAATGCCATATATGCA 57.151 34.783 7.24 9.35 43.97 3.96
2878 3479 7.536895 TTTTGTGTTCAAATGCCATATATGC 57.463 32.000 7.24 3.97 42.14 3.14
2884 3485 9.680315 CAAATTTATTTTGTGTTCAAATGCCAT 57.320 25.926 0.00 0.00 42.14 4.40
2885 3486 8.896744 TCAAATTTATTTTGTGTTCAAATGCCA 58.103 25.926 0.00 0.00 44.25 4.92
2886 3487 9.727627 TTCAAATTTATTTTGTGTTCAAATGCC 57.272 25.926 0.00 0.00 44.25 4.40
2909 3510 7.549615 TGTTCATTGCATTTTGAATGTTTCA 57.450 28.000 9.58 2.31 34.60 2.69
2910 3511 8.283992 TCATGTTCATTGCATTTTGAATGTTTC 58.716 29.630 9.58 0.28 34.60 2.78
2911 3512 8.071368 GTCATGTTCATTGCATTTTGAATGTTT 58.929 29.630 9.58 0.00 34.60 2.83
2912 3513 7.226918 TGTCATGTTCATTGCATTTTGAATGTT 59.773 29.630 9.58 0.00 34.60 2.71
2913 3514 6.706716 TGTCATGTTCATTGCATTTTGAATGT 59.293 30.769 9.58 1.69 34.60 2.71
2914 3515 7.123160 TGTCATGTTCATTGCATTTTGAATG 57.877 32.000 9.58 6.30 34.60 2.67
2915 3516 7.915293 ATGTCATGTTCATTGCATTTTGAAT 57.085 28.000 9.58 0.00 34.60 2.57
2941 3542 9.645059 TCATCAACTTGTTTGTGTGAAATTTTA 57.355 25.926 0.00 0.00 36.49 1.52
2942 3543 8.545229 TCATCAACTTGTTTGTGTGAAATTTT 57.455 26.923 0.00 0.00 36.49 1.82
2943 3544 8.545229 TTCATCAACTTGTTTGTGTGAAATTT 57.455 26.923 0.00 0.00 37.66 1.82
2944 3545 8.721019 ATTCATCAACTTGTTTGTGTGAAATT 57.279 26.923 9.74 0.00 40.68 1.82
2945 3546 9.814899 TTATTCATCAACTTGTTTGTGTGAAAT 57.185 25.926 9.74 0.00 40.68 2.17
2946 3547 9.645059 TTTATTCATCAACTTGTTTGTGTGAAA 57.355 25.926 9.74 0.00 40.68 2.69
2947 3548 9.645059 TTTTATTCATCAACTTGTTTGTGTGAA 57.355 25.926 8.75 8.75 41.10 3.18
2948 3549 9.299963 CTTTTATTCATCAACTTGTTTGTGTGA 57.700 29.630 0.00 0.00 36.49 3.58
2949 3550 9.086336 ACTTTTATTCATCAACTTGTTTGTGTG 57.914 29.630 0.00 0.00 36.49 3.82
2950 3551 9.651913 AACTTTTATTCATCAACTTGTTTGTGT 57.348 25.926 0.00 0.00 36.49 3.72
2952 3553 9.868277 TGAACTTTTATTCATCAACTTGTTTGT 57.132 25.926 0.00 0.00 33.77 2.83
2959 3560 8.450964 CGTGGTATGAACTTTTATTCATCAACT 58.549 33.333 4.34 0.00 44.30 3.16
2960 3561 8.447833 TCGTGGTATGAACTTTTATTCATCAAC 58.552 33.333 4.34 0.00 44.30 3.18
2961 3562 8.554835 TCGTGGTATGAACTTTTATTCATCAA 57.445 30.769 4.34 0.00 44.30 2.57
2962 3563 7.822334 ACTCGTGGTATGAACTTTTATTCATCA 59.178 33.333 4.34 0.00 44.30 3.07
2963 3564 8.197988 ACTCGTGGTATGAACTTTTATTCATC 57.802 34.615 4.34 0.00 44.30 2.92
2965 3566 7.972832 AACTCGTGGTATGAACTTTTATTCA 57.027 32.000 0.00 0.00 42.62 2.57
2970 3571 9.673454 GATTTTAAACTCGTGGTATGAACTTTT 57.327 29.630 0.00 0.00 0.00 2.27
2971 3572 8.842280 TGATTTTAAACTCGTGGTATGAACTTT 58.158 29.630 1.63 0.00 0.00 2.66
2972 3573 8.385898 TGATTTTAAACTCGTGGTATGAACTT 57.614 30.769 1.63 0.00 0.00 2.66
2973 3574 7.972832 TGATTTTAAACTCGTGGTATGAACT 57.027 32.000 1.63 0.00 0.00 3.01
2974 3575 7.218204 GCATGATTTTAAACTCGTGGTATGAAC 59.782 37.037 22.19 6.68 0.00 3.18
2975 3576 7.247728 GCATGATTTTAAACTCGTGGTATGAA 58.752 34.615 22.19 0.00 0.00 2.57
2976 3577 6.183360 GGCATGATTTTAAACTCGTGGTATGA 60.183 38.462 22.19 0.00 0.00 2.15
2977 3578 5.971202 GGCATGATTTTAAACTCGTGGTATG 59.029 40.000 22.19 11.76 0.00 2.39
2978 3579 5.067283 GGGCATGATTTTAAACTCGTGGTAT 59.933 40.000 22.19 1.21 0.00 2.73
2979 3580 4.396790 GGGCATGATTTTAAACTCGTGGTA 59.603 41.667 22.19 0.00 0.00 3.25
2980 3581 3.192633 GGGCATGATTTTAAACTCGTGGT 59.807 43.478 22.19 0.33 0.00 4.16
2981 3582 3.192422 TGGGCATGATTTTAAACTCGTGG 59.808 43.478 22.19 9.78 0.00 4.94
2982 3583 4.165779 GTGGGCATGATTTTAAACTCGTG 58.834 43.478 18.60 18.60 0.00 4.35
2983 3584 3.823873 TGTGGGCATGATTTTAAACTCGT 59.176 39.130 0.00 0.00 0.00 4.18
2984 3585 4.433186 TGTGGGCATGATTTTAAACTCG 57.567 40.909 0.00 0.00 0.00 4.18
2985 3586 5.783111 ACTTGTGGGCATGATTTTAAACTC 58.217 37.500 0.00 0.00 0.00 3.01
2986 3587 5.806654 ACTTGTGGGCATGATTTTAAACT 57.193 34.783 0.00 0.00 0.00 2.66
2987 3588 5.988561 TGAACTTGTGGGCATGATTTTAAAC 59.011 36.000 0.00 0.00 0.00 2.01
2988 3589 6.166984 TGAACTTGTGGGCATGATTTTAAA 57.833 33.333 0.00 0.00 0.00 1.52
2989 3590 5.798125 TGAACTTGTGGGCATGATTTTAA 57.202 34.783 0.00 0.00 0.00 1.52
2990 3591 5.105392 GGATGAACTTGTGGGCATGATTTTA 60.105 40.000 0.00 0.00 0.00 1.52
2991 3592 4.322953 GGATGAACTTGTGGGCATGATTTT 60.323 41.667 0.00 0.00 0.00 1.82
2992 3593 3.196254 GGATGAACTTGTGGGCATGATTT 59.804 43.478 0.00 0.00 0.00 2.17
2993 3594 2.762327 GGATGAACTTGTGGGCATGATT 59.238 45.455 0.00 0.00 0.00 2.57
2994 3595 2.291735 TGGATGAACTTGTGGGCATGAT 60.292 45.455 0.00 0.00 0.00 2.45
2995 3596 1.075212 TGGATGAACTTGTGGGCATGA 59.925 47.619 0.00 0.00 0.00 3.07
2996 3597 1.548081 TGGATGAACTTGTGGGCATG 58.452 50.000 0.00 0.00 0.00 4.06
2997 3598 1.895131 GTTGGATGAACTTGTGGGCAT 59.105 47.619 0.00 0.00 0.00 4.40
2998 3599 1.327303 GTTGGATGAACTTGTGGGCA 58.673 50.000 0.00 0.00 0.00 5.36
2999 3600 0.603065 GGTTGGATGAACTTGTGGGC 59.397 55.000 0.00 0.00 34.66 5.36
3000 3601 1.993956 TGGTTGGATGAACTTGTGGG 58.006 50.000 0.00 0.00 34.66 4.61
3001 3602 2.958355 ACTTGGTTGGATGAACTTGTGG 59.042 45.455 0.00 0.00 34.66 4.17
3002 3603 4.654091 AACTTGGTTGGATGAACTTGTG 57.346 40.909 0.00 0.00 34.66 3.33
3003 3604 6.783708 TTAAACTTGGTTGGATGAACTTGT 57.216 33.333 0.00 0.00 34.66 3.16
3004 3605 8.550376 CATTTTAAACTTGGTTGGATGAACTTG 58.450 33.333 0.00 0.00 34.66 3.16
3005 3606 7.226523 GCATTTTAAACTTGGTTGGATGAACTT 59.773 33.333 0.00 0.00 34.66 2.66
3006 3607 6.705825 GCATTTTAAACTTGGTTGGATGAACT 59.294 34.615 0.00 0.00 34.66 3.01
3007 3608 6.481644 TGCATTTTAAACTTGGTTGGATGAAC 59.518 34.615 0.00 0.00 0.00 3.18
3008 3609 6.586344 TGCATTTTAAACTTGGTTGGATGAA 58.414 32.000 0.00 0.00 0.00 2.57
3009 3610 6.166984 TGCATTTTAAACTTGGTTGGATGA 57.833 33.333 0.00 0.00 0.00 2.92
3010 3611 6.857777 TTGCATTTTAAACTTGGTTGGATG 57.142 33.333 0.00 0.00 0.00 3.51
3011 3612 6.262049 GGTTTGCATTTTAAACTTGGTTGGAT 59.738 34.615 0.00 0.00 37.96 3.41
3012 3613 5.586643 GGTTTGCATTTTAAACTTGGTTGGA 59.413 36.000 0.00 0.00 37.96 3.53
3013 3614 5.355350 TGGTTTGCATTTTAAACTTGGTTGG 59.645 36.000 0.00 0.00 37.96 3.77
3014 3615 6.428385 TGGTTTGCATTTTAAACTTGGTTG 57.572 33.333 0.00 0.00 37.96 3.77
3015 3616 6.657117 ACTTGGTTTGCATTTTAAACTTGGTT 59.343 30.769 0.00 0.00 37.96 3.67
3016 3617 6.176896 ACTTGGTTTGCATTTTAAACTTGGT 58.823 32.000 0.00 0.00 37.96 3.67
3017 3618 6.676237 ACTTGGTTTGCATTTTAAACTTGG 57.324 33.333 0.00 0.00 37.96 3.61
3018 3619 7.746929 TGAACTTGGTTTGCATTTTAAACTTG 58.253 30.769 0.00 0.00 37.96 3.16
3019 3620 7.913674 TGAACTTGGTTTGCATTTTAAACTT 57.086 28.000 0.00 0.00 37.96 2.66
3020 3621 7.389053 TGTTGAACTTGGTTTGCATTTTAAACT 59.611 29.630 0.00 0.00 37.96 2.66
3021 3622 7.480229 GTGTTGAACTTGGTTTGCATTTTAAAC 59.520 33.333 0.00 0.00 37.31 2.01
3022 3623 7.173218 TGTGTTGAACTTGGTTTGCATTTTAAA 59.827 29.630 0.00 0.00 0.00 1.52
3023 3624 6.650807 TGTGTTGAACTTGGTTTGCATTTTAA 59.349 30.769 0.00 0.00 0.00 1.52
3024 3625 6.091441 GTGTGTTGAACTTGGTTTGCATTTTA 59.909 34.615 0.00 0.00 0.00 1.52
3025 3626 4.999950 TGTGTTGAACTTGGTTTGCATTTT 59.000 33.333 0.00 0.00 0.00 1.82
3026 3627 4.391523 GTGTGTTGAACTTGGTTTGCATTT 59.608 37.500 0.00 0.00 0.00 2.32
3027 3628 3.932089 GTGTGTTGAACTTGGTTTGCATT 59.068 39.130 0.00 0.00 0.00 3.56
3028 3629 3.056250 TGTGTGTTGAACTTGGTTTGCAT 60.056 39.130 0.00 0.00 0.00 3.96
3029 3630 2.297315 TGTGTGTTGAACTTGGTTTGCA 59.703 40.909 0.00 0.00 0.00 4.08
3030 3631 2.953020 TGTGTGTTGAACTTGGTTTGC 58.047 42.857 0.00 0.00 0.00 3.68
3031 3632 5.636965 TCATTTGTGTGTTGAACTTGGTTTG 59.363 36.000 0.00 0.00 0.00 2.93
3032 3633 5.788450 TCATTTGTGTGTTGAACTTGGTTT 58.212 33.333 0.00 0.00 0.00 3.27
3033 3634 5.398603 TCATTTGTGTGTTGAACTTGGTT 57.601 34.783 0.00 0.00 0.00 3.67
3034 3635 5.398603 TTCATTTGTGTGTTGAACTTGGT 57.601 34.783 0.00 0.00 0.00 3.67
3035 3636 6.034898 GTCTTTCATTTGTGTGTTGAACTTGG 59.965 38.462 0.00 0.00 0.00 3.61
3036 3637 6.585702 TGTCTTTCATTTGTGTGTTGAACTTG 59.414 34.615 0.00 0.00 0.00 3.16
3037 3638 6.586082 GTGTCTTTCATTTGTGTGTTGAACTT 59.414 34.615 0.00 0.00 0.00 2.66
3038 3639 6.092748 GTGTCTTTCATTTGTGTGTTGAACT 58.907 36.000 0.00 0.00 0.00 3.01
3039 3640 5.861251 TGTGTCTTTCATTTGTGTGTTGAAC 59.139 36.000 0.00 0.00 0.00 3.18
3040 3641 6.018589 TGTGTCTTTCATTTGTGTGTTGAA 57.981 33.333 0.00 0.00 0.00 2.69
3041 3642 5.635417 TGTGTCTTTCATTTGTGTGTTGA 57.365 34.783 0.00 0.00 0.00 3.18
3042 3643 6.035217 TGATGTGTCTTTCATTTGTGTGTTG 58.965 36.000 0.00 0.00 0.00 3.33
3043 3644 6.206395 TGATGTGTCTTTCATTTGTGTGTT 57.794 33.333 0.00 0.00 0.00 3.32
3044 3645 5.833406 TGATGTGTCTTTCATTTGTGTGT 57.167 34.783 0.00 0.00 0.00 3.72
3045 3646 6.364165 GGATTGATGTGTCTTTCATTTGTGTG 59.636 38.462 0.00 0.00 0.00 3.82
3046 3647 6.266103 AGGATTGATGTGTCTTTCATTTGTGT 59.734 34.615 0.00 0.00 0.00 3.72
3047 3648 6.684686 AGGATTGATGTGTCTTTCATTTGTG 58.315 36.000 0.00 0.00 0.00 3.33
3048 3649 6.348786 CGAGGATTGATGTGTCTTTCATTTGT 60.349 38.462 0.00 0.00 0.00 2.83
3049 3650 6.025896 CGAGGATTGATGTGTCTTTCATTTG 58.974 40.000 0.00 0.00 0.00 2.32
3050 3651 5.707298 ACGAGGATTGATGTGTCTTTCATTT 59.293 36.000 0.00 0.00 0.00 2.32
3051 3652 5.248640 ACGAGGATTGATGTGTCTTTCATT 58.751 37.500 0.00 0.00 0.00 2.57
3052 3653 4.836825 ACGAGGATTGATGTGTCTTTCAT 58.163 39.130 0.00 0.00 0.00 2.57
3053 3654 4.271696 ACGAGGATTGATGTGTCTTTCA 57.728 40.909 0.00 0.00 0.00 2.69
3054 3655 4.932200 AGAACGAGGATTGATGTGTCTTTC 59.068 41.667 0.00 0.00 0.00 2.62
3055 3656 4.899502 AGAACGAGGATTGATGTGTCTTT 58.100 39.130 0.00 0.00 0.00 2.52
3056 3657 4.021104 TGAGAACGAGGATTGATGTGTCTT 60.021 41.667 0.00 0.00 0.00 3.01
3057 3658 3.511540 TGAGAACGAGGATTGATGTGTCT 59.488 43.478 0.00 0.00 0.00 3.41
3058 3659 3.849911 TGAGAACGAGGATTGATGTGTC 58.150 45.455 0.00 0.00 0.00 3.67
3059 3660 3.961480 TGAGAACGAGGATTGATGTGT 57.039 42.857 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.