Multiple sequence alignment - TraesCS7A01G547300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G547300 chr7A 100.000 3300 0 0 1 3300 722571111 722574410 0.000000e+00 6095.0
1 TraesCS7A01G547300 chr7A 88.557 769 80 5 1674 2441 722482371 722483132 0.000000e+00 926.0
2 TraesCS7A01G547300 chr7A 86.834 676 58 20 1 659 722447556 722448217 0.000000e+00 726.0
3 TraesCS7A01G547300 chr7A 88.651 608 22 15 647 1227 722451091 722451678 0.000000e+00 697.0
4 TraesCS7A01G547300 chr7A 88.675 468 45 2 1681 2141 722451675 722452141 6.180000e-157 564.0
5 TraesCS7A01G547300 chr7A 85.965 342 20 16 892 1230 722482070 722482386 1.130000e-89 340.0
6 TraesCS7A01G547300 chr7A 82.965 317 37 11 222 533 149874618 149874922 1.510000e-68 270.0
7 TraesCS7A01G547300 chr7A 86.634 202 25 2 1019 1219 722414385 722414585 4.290000e-54 222.0
8 TraesCS7A01G547300 chr7A 88.079 151 16 2 1226 1376 576214327 576214179 9.410000e-41 178.0
9 TraesCS7A01G547300 chr7A 80.645 186 26 8 1496 1676 47793206 47793386 5.740000e-28 135.0
10 TraesCS7A01G547300 chr7A 96.923 65 2 0 3236 3300 21230290 21230354 3.480000e-20 110.0
11 TraesCS7A01G547300 chr7D 87.294 1275 82 43 1 1227 627070292 627071534 0.000000e+00 1384.0
12 TraesCS7A01G547300 chr7D 88.197 771 82 6 1679 2445 627059394 627060159 0.000000e+00 911.0
13 TraesCS7A01G547300 chr7D 87.816 673 57 8 1679 2351 627071529 627072176 0.000000e+00 765.0
14 TraesCS7A01G547300 chr7D 89.201 463 45 5 2506 2966 64071503 64071962 1.030000e-159 573.0
15 TraesCS7A01G547300 chr7D 83.654 520 41 25 738 1227 627058894 627059399 1.810000e-122 449.0
16 TraesCS7A01G547300 chr7D 78.280 465 88 10 1734 2193 627024274 627024730 1.500000e-73 287.0
17 TraesCS7A01G547300 chr7D 86.996 223 20 5 1000 1219 626909014 626909230 3.290000e-60 243.0
18 TraesCS7A01G547300 chr7D 83.784 222 26 8 1000 1219 627024015 627024228 5.580000e-48 202.0
19 TraesCS7A01G547300 chr7D 88.525 61 6 1 3215 3274 64072068 64072128 4.570000e-09 73.1
20 TraesCS7A01G547300 chr3B 93.233 798 35 10 2506 3300 750786692 750787473 0.000000e+00 1157.0
21 TraesCS7A01G547300 chr3B 83.948 461 46 14 2578 3018 685495914 685496366 1.830000e-112 416.0
22 TraesCS7A01G547300 chr3B 79.695 394 58 13 186 560 769393355 769392965 7.020000e-67 265.0
23 TraesCS7A01G547300 chr3B 79.042 334 57 7 216 542 117345657 117345330 1.990000e-52 217.0
24 TraesCS7A01G547300 chr7B 87.840 773 84 3 1679 2445 727653875 727653107 0.000000e+00 898.0
25 TraesCS7A01G547300 chr7B 90.949 453 23 11 2795 3241 588061850 588062290 7.880000e-166 593.0
26 TraesCS7A01G547300 chr7B 83.582 603 65 15 1 584 727656032 727655445 4.850000e-148 534.0
27 TraesCS7A01G547300 chr7B 92.105 342 23 3 892 1230 727654207 727653867 2.300000e-131 479.0
28 TraesCS7A01G547300 chr7B 96.218 238 9 0 2506 2743 588060028 588060265 1.110000e-104 390.0
29 TraesCS7A01G547300 chr7B 88.288 222 8 9 672 890 727654442 727654236 1.970000e-62 250.0
30 TraesCS7A01G547300 chr7B 91.096 146 12 1 1230 1375 614644836 614644692 2.600000e-46 196.0
31 TraesCS7A01G547300 chr7B 82.063 223 36 4 1230 1451 111994377 111994596 1.560000e-43 187.0
32 TraesCS7A01G547300 chr7B 88.696 115 11 2 1562 1675 111994785 111994898 4.440000e-29 139.0
33 TraesCS7A01G547300 chr7B 92.405 79 6 0 1748 1826 727689329 727689251 2.690000e-21 113.0
34 TraesCS7A01G547300 chr2D 90.826 436 35 5 2533 2966 59473711 59474143 2.210000e-161 579.0
35 TraesCS7A01G547300 chr2D 81.173 324 43 12 255 562 186809809 186810130 9.150000e-61 244.0
36 TraesCS7A01G547300 chr2D 82.609 184 24 7 1496 1675 120983163 120983342 4.410000e-34 156.0
37 TraesCS7A01G547300 chr2D 88.525 61 6 1 3215 3274 59474249 59474309 4.570000e-09 73.1
38 TraesCS7A01G547300 chr5A 89.503 362 35 3 2506 2865 631999687 631999327 3.880000e-124 455.0
39 TraesCS7A01G547300 chr5A 77.920 548 84 24 2506 3024 445277428 445277967 1.150000e-79 307.0
40 TraesCS7A01G547300 chr5A 88.535 157 17 1 1231 1387 607383321 607383476 4.350000e-44 189.0
41 TraesCS7A01G547300 chr5A 85.294 136 19 1 1544 1678 607391021 607391156 4.440000e-29 139.0
42 TraesCS7A01G547300 chr2A 94.619 223 9 1 1230 1452 780338431 780338650 3.150000e-90 342.0
43 TraesCS7A01G547300 chr2A 95.431 197 9 0 1481 1677 780338720 780338916 6.870000e-82 315.0
44 TraesCS7A01G547300 chr2A 96.667 150 5 0 1304 1453 747259574 747259425 1.970000e-62 250.0
45 TraesCS7A01G547300 chr2A 89.744 195 9 1 1484 1678 747259318 747259135 4.260000e-59 239.0
46 TraesCS7A01G547300 chr5D 82.335 334 47 9 222 549 242373248 242373575 2.510000e-71 279.0
47 TraesCS7A01G547300 chr3D 81.311 305 44 8 216 512 561463451 561463750 5.510000e-58 235.0
48 TraesCS7A01G547300 chrUn 85.650 223 23 5 1000 1219 83608266 83608482 3.310000e-55 226.0
49 TraesCS7A01G547300 chr4B 79.077 325 53 11 222 536 654561988 654562307 3.340000e-50 209.0
50 TraesCS7A01G547300 chr5B 82.648 219 37 1 1234 1452 549193662 549193445 3.360000e-45 193.0
51 TraesCS7A01G547300 chr5B 88.889 117 13 0 1562 1678 549193134 549193018 9.540000e-31 145.0
52 TraesCS7A01G547300 chr6B 90.411 146 11 3 1230 1374 716435409 716435552 4.350000e-44 189.0
53 TraesCS7A01G547300 chr3A 82.018 228 35 4 1226 1451 735343808 735344031 4.350000e-44 189.0
54 TraesCS7A01G547300 chr3A 81.081 185 31 4 1496 1678 696087405 696087587 9.540000e-31 145.0
55 TraesCS7A01G547300 chr3A 88.983 118 11 2 1562 1678 723443595 723443711 9.540000e-31 145.0
56 TraesCS7A01G547300 chr3A 89.773 88 9 0 3213 3300 702964885 702964972 2.690000e-21 113.0
57 TraesCS7A01G547300 chr4A 92.424 132 9 1 1230 1361 620133065 620133195 1.560000e-43 187.0
58 TraesCS7A01G547300 chr4A 88.696 115 11 2 1562 1675 620133470 620133583 4.440000e-29 139.0
59 TraesCS7A01G547300 chr1D 87.500 88 11 0 3213 3300 360470086 360469999 5.830000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G547300 chr7A 722571111 722574410 3299 False 6095.000000 6095 100.000000 1 3300 1 chr7A.!!$F5 3299
1 TraesCS7A01G547300 chr7A 722447556 722452141 4585 False 662.333333 726 88.053333 1 2141 3 chr7A.!!$F6 2140
2 TraesCS7A01G547300 chr7A 722482070 722483132 1062 False 633.000000 926 87.261000 892 2441 2 chr7A.!!$F7 1549
3 TraesCS7A01G547300 chr7D 627070292 627072176 1884 False 1074.500000 1384 87.555000 1 2351 2 chr7D.!!$F5 2350
4 TraesCS7A01G547300 chr7D 627058894 627060159 1265 False 680.000000 911 85.925500 738 2445 2 chr7D.!!$F4 1707
5 TraesCS7A01G547300 chr7D 64071503 64072128 625 False 323.050000 573 88.863000 2506 3274 2 chr7D.!!$F2 768
6 TraesCS7A01G547300 chr7D 627024015 627024730 715 False 244.500000 287 81.032000 1000 2193 2 chr7D.!!$F3 1193
7 TraesCS7A01G547300 chr3B 750786692 750787473 781 False 1157.000000 1157 93.233000 2506 3300 1 chr3B.!!$F2 794
8 TraesCS7A01G547300 chr7B 727653107 727656032 2925 True 540.250000 898 87.953750 1 2445 4 chr7B.!!$R3 2444
9 TraesCS7A01G547300 chr7B 588060028 588062290 2262 False 491.500000 593 93.583500 2506 3241 2 chr7B.!!$F2 735
10 TraesCS7A01G547300 chr2D 59473711 59474309 598 False 326.050000 579 89.675500 2533 3274 2 chr2D.!!$F3 741
11 TraesCS7A01G547300 chr5A 445277428 445277967 539 False 307.000000 307 77.920000 2506 3024 1 chr5A.!!$F1 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 465 0.038892 TTAGAACGGACCTCACGCAC 60.039 55.0 0.00 0.0 34.00 5.34 F
1237 5167 0.113190 CTCCTCCCTGGCAAGGTTTT 59.887 55.0 6.34 0.0 42.74 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1398 5328 0.036010 CTGGGGTGCTACCAACTCTG 60.036 60.0 7.49 0.0 41.02 3.35 R
2491 6440 0.320771 ACTCCCGCTTTGCACACTAG 60.321 55.0 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 7.160726 GGATGAAAAATTTGATGGAGGACAAA 58.839 34.615 0.00 0.00 39.67 2.83
167 170 5.505181 AAGAAAATCTAGTGCTCCCTTCA 57.495 39.130 0.00 0.00 0.00 3.02
210 213 2.195139 GCCCAGGCTCATCTGCAT 59.805 61.111 0.08 0.00 38.26 3.96
211 214 1.455217 GCCCAGGCTCATCTGCATT 60.455 57.895 0.08 0.00 38.26 3.56
347 360 5.278957 CCAAAAAGACAAATCGGGTCAGAAT 60.279 40.000 0.00 0.00 37.74 2.40
424 441 8.579850 AGCTACTCAAATGTCCAAATGATTTA 57.420 30.769 0.00 0.00 0.00 1.40
448 465 0.038892 TTAGAACGGACCTCACGCAC 60.039 55.000 0.00 0.00 34.00 5.34
449 466 1.174078 TAGAACGGACCTCACGCACA 61.174 55.000 0.00 0.00 34.00 4.57
452 469 1.157870 AACGGACCTCACGCACAAAG 61.158 55.000 0.00 0.00 34.00 2.77
641 1612 4.380550 GCCTTGTTCAAAGGTAGTATTGGC 60.381 45.833 6.03 0.00 39.60 4.52
765 4624 1.129251 CAACATGACAGCTAAGGCACG 59.871 52.381 0.00 0.00 41.70 5.34
1076 5000 1.191489 TCCAAGCCTCGTCATGTCCA 61.191 55.000 0.00 0.00 0.00 4.02
1228 5158 3.465403 CGCTCCACTCCTCCCTGG 61.465 72.222 0.00 0.00 37.10 4.45
1229 5159 3.791586 GCTCCACTCCTCCCTGGC 61.792 72.222 0.00 0.00 35.26 4.85
1230 5160 2.284921 CTCCACTCCTCCCTGGCA 60.285 66.667 0.00 0.00 35.26 4.92
1231 5161 1.920325 CTCCACTCCTCCCTGGCAA 60.920 63.158 0.00 0.00 35.26 4.52
1232 5162 1.908340 CTCCACTCCTCCCTGGCAAG 61.908 65.000 0.00 0.00 35.26 4.01
1233 5163 2.673523 CACTCCTCCCTGGCAAGG 59.326 66.667 0.00 0.00 44.06 3.61
1234 5164 2.208349 ACTCCTCCCTGGCAAGGT 59.792 61.111 6.34 0.00 42.74 3.50
1235 5165 1.464198 ACTCCTCCCTGGCAAGGTT 60.464 57.895 6.34 0.70 42.74 3.50
1236 5166 1.068352 ACTCCTCCCTGGCAAGGTTT 61.068 55.000 6.34 0.42 42.74 3.27
1237 5167 0.113190 CTCCTCCCTGGCAAGGTTTT 59.887 55.000 6.34 0.00 42.74 2.43
1238 5168 0.178964 TCCTCCCTGGCAAGGTTTTG 60.179 55.000 6.34 0.00 42.74 2.44
1239 5169 1.187567 CCTCCCTGGCAAGGTTTTGG 61.188 60.000 6.34 0.00 42.74 3.28
1240 5170 0.178964 CTCCCTGGCAAGGTTTTGGA 60.179 55.000 6.34 0.00 42.74 3.53
1241 5171 0.486879 TCCCTGGCAAGGTTTTGGAT 59.513 50.000 6.34 0.00 42.74 3.41
1242 5172 1.132881 TCCCTGGCAAGGTTTTGGATT 60.133 47.619 6.34 0.00 42.74 3.01
1243 5173 1.276138 CCCTGGCAAGGTTTTGGATTC 59.724 52.381 6.34 0.00 42.74 2.52
1244 5174 1.276138 CCTGGCAAGGTTTTGGATTCC 59.724 52.381 0.00 0.00 38.96 3.01
1245 5175 0.965439 TGGCAAGGTTTTGGATTCCG 59.035 50.000 0.00 0.00 34.79 4.30
1246 5176 1.253100 GGCAAGGTTTTGGATTCCGA 58.747 50.000 0.00 0.00 34.79 4.55
1247 5177 1.616374 GGCAAGGTTTTGGATTCCGAA 59.384 47.619 0.84 0.84 34.79 4.30
1248 5178 2.233676 GGCAAGGTTTTGGATTCCGAAT 59.766 45.455 6.20 0.00 34.79 3.34
1249 5179 3.253230 GCAAGGTTTTGGATTCCGAATG 58.747 45.455 6.20 3.34 34.79 2.67
1250 5180 3.848726 CAAGGTTTTGGATTCCGAATGG 58.151 45.455 6.20 0.00 0.00 3.16
1251 5181 3.449746 AGGTTTTGGATTCCGAATGGA 57.550 42.857 6.20 0.00 44.61 3.41
1252 5182 3.089284 AGGTTTTGGATTCCGAATGGAC 58.911 45.455 6.20 2.31 46.45 4.02
1253 5183 2.159435 GGTTTTGGATTCCGAATGGACG 60.159 50.000 6.20 0.00 46.45 4.79
1254 5184 2.745281 GTTTTGGATTCCGAATGGACGA 59.255 45.455 6.20 0.00 46.45 4.20
1255 5185 2.772077 TTGGATTCCGAATGGACGAA 57.228 45.000 0.00 0.00 46.45 3.85
1256 5186 3.275617 TTGGATTCCGAATGGACGAAT 57.724 42.857 0.00 0.00 46.45 3.34
1257 5187 3.275617 TGGATTCCGAATGGACGAATT 57.724 42.857 0.00 0.00 46.45 2.17
1258 5188 3.616219 TGGATTCCGAATGGACGAATTT 58.384 40.909 0.00 0.00 46.45 1.82
1259 5189 4.013728 TGGATTCCGAATGGACGAATTTT 58.986 39.130 0.00 0.00 46.45 1.82
1260 5190 4.095782 TGGATTCCGAATGGACGAATTTTC 59.904 41.667 0.00 0.00 46.45 2.29
1261 5191 4.335594 GGATTCCGAATGGACGAATTTTCT 59.664 41.667 0.00 0.00 46.45 2.52
1262 5192 4.939509 TTCCGAATGGACGAATTTTCTC 57.060 40.909 0.00 0.00 46.45 2.87
1263 5193 2.927477 TCCGAATGGACGAATTTTCTCG 59.073 45.455 0.00 0.00 40.17 4.04
1293 5223 2.231215 GAGATTCTCGGTCACCATGG 57.769 55.000 11.19 11.19 0.00 3.66
1294 5224 1.482593 GAGATTCTCGGTCACCATGGT 59.517 52.381 13.00 13.00 0.00 3.55
1295 5225 1.909302 AGATTCTCGGTCACCATGGTT 59.091 47.619 16.84 0.00 0.00 3.67
1296 5226 3.104512 AGATTCTCGGTCACCATGGTTA 58.895 45.455 16.84 4.10 0.00 2.85
1297 5227 2.754946 TTCTCGGTCACCATGGTTAC 57.245 50.000 16.84 18.22 0.00 2.50
1298 5228 0.899720 TCTCGGTCACCATGGTTACC 59.100 55.000 30.91 30.91 38.60 2.85
1301 5231 3.453559 GGTCACCATGGTTACCGAG 57.546 57.895 28.21 11.49 33.45 4.63
1302 5232 0.899720 GGTCACCATGGTTACCGAGA 59.100 55.000 28.21 13.63 33.45 4.04
1303 5233 1.276989 GGTCACCATGGTTACCGAGAA 59.723 52.381 28.21 0.00 33.45 2.87
1304 5234 2.289819 GGTCACCATGGTTACCGAGAAA 60.290 50.000 28.21 0.00 33.45 2.52
1305 5235 3.606687 GTCACCATGGTTACCGAGAAAT 58.393 45.455 16.84 0.00 0.00 2.17
1306 5236 4.383335 GGTCACCATGGTTACCGAGAAATA 60.383 45.833 28.21 0.00 33.45 1.40
1307 5237 4.569564 GTCACCATGGTTACCGAGAAATAC 59.430 45.833 16.84 0.00 0.00 1.89
1308 5238 3.875134 CACCATGGTTACCGAGAAATACC 59.125 47.826 16.84 0.00 0.00 2.73
1309 5239 3.128349 CCATGGTTACCGAGAAATACCG 58.872 50.000 2.57 0.00 0.00 4.02
1310 5240 3.181473 CCATGGTTACCGAGAAATACCGA 60.181 47.826 2.57 0.00 0.00 4.69
1311 5241 4.435425 CATGGTTACCGAGAAATACCGAA 58.565 43.478 0.00 0.00 0.00 4.30
1312 5242 3.848726 TGGTTACCGAGAAATACCGAAC 58.151 45.455 0.00 0.00 0.00 3.95
1313 5243 3.257873 TGGTTACCGAGAAATACCGAACA 59.742 43.478 0.00 0.00 0.00 3.18
1314 5244 4.081531 TGGTTACCGAGAAATACCGAACAT 60.082 41.667 0.00 0.00 0.00 2.71
1315 5245 5.126869 TGGTTACCGAGAAATACCGAACATA 59.873 40.000 0.00 0.00 0.00 2.29
1316 5246 6.183360 TGGTTACCGAGAAATACCGAACATAT 60.183 38.462 0.00 0.00 0.00 1.78
1317 5247 6.703165 GGTTACCGAGAAATACCGAACATATT 59.297 38.462 0.00 0.00 0.00 1.28
1318 5248 7.225341 GGTTACCGAGAAATACCGAACATATTT 59.775 37.037 0.00 0.00 35.43 1.40
1319 5249 6.839820 ACCGAGAAATACCGAACATATTTC 57.160 37.500 8.71 8.71 44.27 2.17
1320 5250 5.461078 ACCGAGAAATACCGAACATATTTCG 59.539 40.000 10.33 10.96 46.64 3.46
1367 5297 9.504710 TTCGAATTCAAATTGTTTTAAGTTCGA 57.495 25.926 6.22 7.49 37.69 3.71
1368 5298 9.672086 TCGAATTCAAATTGTTTTAAGTTCGAT 57.328 25.926 6.22 0.00 36.31 3.59
1396 5326 8.986477 AGATAAAAGTTGAACCAATATTGTGC 57.014 30.769 14.25 3.99 0.00 4.57
1397 5327 8.584157 AGATAAAAGTTGAACCAATATTGTGCA 58.416 29.630 14.25 6.40 0.00 4.57
1398 5328 6.843069 AAAAGTTGAACCAATATTGTGCAC 57.157 33.333 10.75 10.75 0.00 4.57
1399 5329 5.528043 AAGTTGAACCAATATTGTGCACA 57.472 34.783 17.42 17.42 0.00 4.57
1400 5330 5.125100 AGTTGAACCAATATTGTGCACAG 57.875 39.130 20.59 9.81 0.00 3.66
1401 5331 4.826733 AGTTGAACCAATATTGTGCACAGA 59.173 37.500 20.59 12.73 0.00 3.41
1402 5332 5.048504 AGTTGAACCAATATTGTGCACAGAG 60.049 40.000 20.59 9.08 0.00 3.35
1403 5333 4.397420 TGAACCAATATTGTGCACAGAGT 58.603 39.130 20.59 12.60 0.00 3.24
1404 5334 4.826733 TGAACCAATATTGTGCACAGAGTT 59.173 37.500 20.59 16.57 0.00 3.01
1405 5335 4.771590 ACCAATATTGTGCACAGAGTTG 57.228 40.909 20.59 21.93 0.00 3.16
1406 5336 3.507233 ACCAATATTGTGCACAGAGTTGG 59.493 43.478 33.98 33.98 37.77 3.77
1407 5337 3.507233 CCAATATTGTGCACAGAGTTGGT 59.493 43.478 30.87 14.90 32.50 3.67
1408 5338 4.699735 CCAATATTGTGCACAGAGTTGGTA 59.300 41.667 30.87 15.43 32.50 3.25
1409 5339 5.163723 CCAATATTGTGCACAGAGTTGGTAG 60.164 44.000 30.87 17.66 32.50 3.18
1410 5340 1.593196 TTGTGCACAGAGTTGGTAGC 58.407 50.000 20.59 0.00 0.00 3.58
1411 5341 0.467804 TGTGCACAGAGTTGGTAGCA 59.532 50.000 17.42 0.00 0.00 3.49
1412 5342 0.868406 GTGCACAGAGTTGGTAGCAC 59.132 55.000 13.17 0.00 41.18 4.40
1413 5343 0.250295 TGCACAGAGTTGGTAGCACC 60.250 55.000 0.00 0.00 39.22 5.01
1414 5344 0.955919 GCACAGAGTTGGTAGCACCC 60.956 60.000 0.00 0.00 37.50 4.61
1415 5345 0.321653 CACAGAGTTGGTAGCACCCC 60.322 60.000 0.00 0.00 37.50 4.95
1416 5346 0.766674 ACAGAGTTGGTAGCACCCCA 60.767 55.000 0.00 0.00 37.50 4.96
1417 5347 0.036010 CAGAGTTGGTAGCACCCCAG 60.036 60.000 0.00 0.00 37.50 4.45
1418 5348 0.473886 AGAGTTGGTAGCACCCCAGT 60.474 55.000 0.00 0.00 37.50 4.00
1420 5350 1.303317 GTTGGTAGCACCCCAGTGG 60.303 63.158 0.63 0.63 44.69 4.00
1421 5351 1.462432 TTGGTAGCACCCCAGTGGA 60.462 57.895 11.95 0.00 44.69 4.02
1422 5352 1.063070 TTGGTAGCACCCCAGTGGAA 61.063 55.000 11.95 0.00 44.69 3.53
1423 5353 0.844661 TGGTAGCACCCCAGTGGAAT 60.845 55.000 11.95 0.00 44.69 3.01
1424 5354 0.394352 GGTAGCACCCCAGTGGAATG 60.394 60.000 11.95 9.53 44.69 2.67
1425 5355 0.328258 GTAGCACCCCAGTGGAATGT 59.672 55.000 11.95 1.55 44.69 2.71
1426 5356 0.618458 TAGCACCCCAGTGGAATGTC 59.382 55.000 11.95 5.05 44.69 3.06
1427 5357 1.136329 AGCACCCCAGTGGAATGTCT 61.136 55.000 11.95 7.16 44.69 3.41
1428 5358 0.251341 GCACCCCAGTGGAATGTCTT 60.251 55.000 11.95 0.00 44.69 3.01
1429 5359 1.538047 CACCCCAGTGGAATGTCTTG 58.462 55.000 11.95 0.00 40.55 3.02
1430 5360 0.405585 ACCCCAGTGGAATGTCTTGG 59.594 55.000 11.95 2.69 38.00 3.61
1431 5361 0.698238 CCCCAGTGGAATGTCTTGGA 59.302 55.000 11.95 0.00 35.39 3.53
1432 5362 1.614317 CCCCAGTGGAATGTCTTGGAC 60.614 57.143 11.95 0.00 35.39 4.02
1433 5363 1.442769 CCAGTGGAATGTCTTGGACG 58.557 55.000 1.68 0.00 34.95 4.79
1434 5364 0.798776 CAGTGGAATGTCTTGGACGC 59.201 55.000 0.00 0.00 34.95 5.19
1435 5365 0.670546 AGTGGAATGTCTTGGACGCG 60.671 55.000 3.53 3.53 34.95 6.01
1436 5366 2.032634 TGGAATGTCTTGGACGCGC 61.033 57.895 5.73 0.00 34.95 6.86
1437 5367 1.741770 GGAATGTCTTGGACGCGCT 60.742 57.895 5.73 0.00 34.95 5.92
1438 5368 0.459585 GGAATGTCTTGGACGCGCTA 60.460 55.000 5.73 0.00 34.95 4.26
1439 5369 1.355971 GAATGTCTTGGACGCGCTAA 58.644 50.000 5.73 2.24 34.95 3.09
1440 5370 1.324736 GAATGTCTTGGACGCGCTAAG 59.675 52.381 5.73 12.96 36.50 2.18
1441 5371 0.246635 ATGTCTTGGACGCGCTAAGT 59.753 50.000 19.81 0.00 36.55 2.24
1442 5372 0.883153 TGTCTTGGACGCGCTAAGTA 59.117 50.000 19.81 11.59 36.55 2.24
1443 5373 1.270274 TGTCTTGGACGCGCTAAGTAA 59.730 47.619 19.81 10.90 36.55 2.24
1444 5374 2.288334 TGTCTTGGACGCGCTAAGTAAA 60.288 45.455 19.81 9.15 36.55 2.01
1445 5375 2.344741 GTCTTGGACGCGCTAAGTAAAG 59.655 50.000 19.81 4.38 36.55 1.85
1446 5376 2.229543 TCTTGGACGCGCTAAGTAAAGA 59.770 45.455 19.81 6.63 36.55 2.52
1447 5377 2.273370 TGGACGCGCTAAGTAAAGAG 57.727 50.000 5.73 0.00 0.00 2.85
1448 5378 1.135199 TGGACGCGCTAAGTAAAGAGG 60.135 52.381 5.73 0.00 0.00 3.69
1449 5379 1.135170 GGACGCGCTAAGTAAAGAGGT 60.135 52.381 5.73 0.00 0.00 3.85
1450 5380 2.183636 GACGCGCTAAGTAAAGAGGTC 58.816 52.381 5.73 0.00 0.00 3.85
1451 5381 1.189403 CGCGCTAAGTAAAGAGGTCG 58.811 55.000 5.56 0.00 0.00 4.79
1452 5382 0.922032 GCGCTAAGTAAAGAGGTCGC 59.078 55.000 0.00 0.00 34.61 5.19
1453 5383 1.734707 GCGCTAAGTAAAGAGGTCGCA 60.735 52.381 0.00 0.00 40.82 5.10
1454 5384 2.602878 CGCTAAGTAAAGAGGTCGCAA 58.397 47.619 0.00 0.00 0.00 4.85
1455 5385 2.991190 CGCTAAGTAAAGAGGTCGCAAA 59.009 45.455 0.00 0.00 0.00 3.68
1456 5386 3.430895 CGCTAAGTAAAGAGGTCGCAAAA 59.569 43.478 0.00 0.00 0.00 2.44
1457 5387 4.434330 CGCTAAGTAAAGAGGTCGCAAAAG 60.434 45.833 0.00 0.00 0.00 2.27
1458 5388 4.451435 GCTAAGTAAAGAGGTCGCAAAAGT 59.549 41.667 0.00 0.00 0.00 2.66
1459 5389 5.049612 GCTAAGTAAAGAGGTCGCAAAAGTT 60.050 40.000 0.00 0.00 0.00 2.66
1460 5390 4.813296 AGTAAAGAGGTCGCAAAAGTTG 57.187 40.909 0.00 0.00 0.00 3.16
1461 5391 4.196971 AGTAAAGAGGTCGCAAAAGTTGT 58.803 39.130 0.00 0.00 0.00 3.32
1462 5392 3.420839 AAAGAGGTCGCAAAAGTTGTG 57.579 42.857 0.00 0.00 42.36 3.33
1463 5393 0.663153 AGAGGTCGCAAAAGTTGTGC 59.337 50.000 8.06 8.06 40.84 4.57
1464 5394 0.317854 GAGGTCGCAAAAGTTGTGCC 60.318 55.000 12.50 0.00 40.84 5.01
1465 5395 1.034838 AGGTCGCAAAAGTTGTGCCA 61.035 50.000 12.50 0.00 40.84 4.92
1466 5396 0.179124 GGTCGCAAAAGTTGTGCCAA 60.179 50.000 12.50 0.00 40.84 4.52
1467 5397 1.634702 GTCGCAAAAGTTGTGCCAAA 58.365 45.000 12.50 0.00 40.84 3.28
1468 5398 1.587946 GTCGCAAAAGTTGTGCCAAAG 59.412 47.619 12.50 0.00 40.84 2.77
1469 5399 0.929615 CGCAAAAGTTGTGCCAAAGG 59.070 50.000 12.50 0.00 38.86 3.11
1470 5400 1.738700 CGCAAAAGTTGTGCCAAAGGT 60.739 47.619 12.50 0.00 38.86 3.50
1471 5401 1.665169 GCAAAAGTTGTGCCAAAGGTG 59.335 47.619 6.78 0.00 35.91 4.00
1473 5403 0.829990 AAAGTTGTGCCAAAGGTGGG 59.170 50.000 0.00 0.00 46.09 4.61
1474 5404 0.032615 AAGTTGTGCCAAAGGTGGGA 60.033 50.000 0.00 0.00 46.09 4.37
1478 5408 4.413928 TGCCAAAGGTGGGAATCG 57.586 55.556 0.00 0.00 43.30 3.34
1479 5409 1.764422 TGCCAAAGGTGGGAATCGA 59.236 52.632 0.00 0.00 43.30 3.59
1480 5410 0.111446 TGCCAAAGGTGGGAATCGAA 59.889 50.000 0.00 0.00 43.30 3.71
1481 5411 0.526211 GCCAAAGGTGGGAATCGAAC 59.474 55.000 0.00 0.00 46.09 3.95
1482 5412 1.904287 CCAAAGGTGGGAATCGAACA 58.096 50.000 0.00 0.00 41.77 3.18
1483 5413 1.812571 CCAAAGGTGGGAATCGAACAG 59.187 52.381 0.00 0.00 41.77 3.16
1484 5414 2.504367 CAAAGGTGGGAATCGAACAGT 58.496 47.619 0.00 0.00 0.00 3.55
1485 5415 3.558321 CCAAAGGTGGGAATCGAACAGTA 60.558 47.826 0.00 0.00 41.77 2.74
1486 5416 3.611766 AAGGTGGGAATCGAACAGTAG 57.388 47.619 0.00 0.00 0.00 2.57
1487 5417 2.537143 AGGTGGGAATCGAACAGTAGT 58.463 47.619 0.00 0.00 0.00 2.73
1488 5418 3.705051 AGGTGGGAATCGAACAGTAGTA 58.295 45.455 0.00 0.00 0.00 1.82
1489 5419 3.700038 AGGTGGGAATCGAACAGTAGTAG 59.300 47.826 0.00 0.00 0.00 2.57
1490 5420 3.698040 GGTGGGAATCGAACAGTAGTAGA 59.302 47.826 0.00 0.00 0.00 2.59
1491 5421 4.439837 GGTGGGAATCGAACAGTAGTAGAC 60.440 50.000 0.00 0.00 0.00 2.59
1492 5422 3.698040 TGGGAATCGAACAGTAGTAGACC 59.302 47.826 0.00 0.00 0.00 3.85
1493 5423 3.952967 GGGAATCGAACAGTAGTAGACCT 59.047 47.826 0.00 0.00 0.00 3.85
1494 5424 5.128919 GGGAATCGAACAGTAGTAGACCTA 58.871 45.833 0.00 0.00 0.00 3.08
1495 5425 5.769162 GGGAATCGAACAGTAGTAGACCTAT 59.231 44.000 0.00 0.00 0.00 2.57
1496 5426 6.939163 GGGAATCGAACAGTAGTAGACCTATA 59.061 42.308 0.00 0.00 0.00 1.31
1497 5427 7.094848 GGGAATCGAACAGTAGTAGACCTATAC 60.095 44.444 0.00 0.00 0.00 1.47
1498 5428 7.094848 GGAATCGAACAGTAGTAGACCTATACC 60.095 44.444 0.00 0.00 0.00 2.73
1499 5429 6.239217 TCGAACAGTAGTAGACCTATACCA 57.761 41.667 0.00 0.00 0.00 3.25
1500 5430 6.051717 TCGAACAGTAGTAGACCTATACCAC 58.948 44.000 0.00 0.00 0.00 4.16
1501 5431 5.238214 CGAACAGTAGTAGACCTATACCACC 59.762 48.000 0.00 0.00 0.00 4.61
1502 5432 4.712476 ACAGTAGTAGACCTATACCACCG 58.288 47.826 0.00 0.00 0.00 4.94
1503 5433 3.501445 CAGTAGTAGACCTATACCACCGC 59.499 52.174 0.00 0.00 0.00 5.68
1504 5434 1.602311 AGTAGACCTATACCACCGCG 58.398 55.000 0.00 0.00 0.00 6.46
1505 5435 0.039708 GTAGACCTATACCACCGCGC 60.040 60.000 0.00 0.00 0.00 6.86
1506 5436 1.174712 TAGACCTATACCACCGCGCC 61.175 60.000 0.00 0.00 0.00 6.53
1507 5437 2.760799 ACCTATACCACCGCGCCA 60.761 61.111 0.00 0.00 0.00 5.69
1508 5438 2.279918 CCTATACCACCGCGCCAC 60.280 66.667 0.00 0.00 0.00 5.01
1509 5439 2.497293 CTATACCACCGCGCCACA 59.503 61.111 0.00 0.00 0.00 4.17
1510 5440 1.591594 CTATACCACCGCGCCACAG 60.592 63.158 0.00 0.00 0.00 3.66
1511 5441 3.726595 TATACCACCGCGCCACAGC 62.727 63.158 0.00 0.00 0.00 4.40
1520 5450 4.688419 CGCCACAGCTGCGTTTGG 62.688 66.667 15.27 15.17 46.59 3.28
1521 5451 3.595758 GCCACAGCTGCGTTTGGT 61.596 61.111 15.27 0.00 35.50 3.67
1522 5452 2.332514 CCACAGCTGCGTTTGGTG 59.667 61.111 15.27 2.05 38.68 4.17
1523 5453 2.186160 CCACAGCTGCGTTTGGTGA 61.186 57.895 15.27 0.00 36.81 4.02
1524 5454 1.518056 CCACAGCTGCGTTTGGTGAT 61.518 55.000 15.27 0.00 36.81 3.06
1525 5455 1.155889 CACAGCTGCGTTTGGTGATA 58.844 50.000 15.27 0.00 36.81 2.15
1526 5456 1.739466 CACAGCTGCGTTTGGTGATAT 59.261 47.619 15.27 0.00 36.81 1.63
1527 5457 2.162208 CACAGCTGCGTTTGGTGATATT 59.838 45.455 15.27 0.00 36.81 1.28
1528 5458 2.420022 ACAGCTGCGTTTGGTGATATTC 59.580 45.455 15.27 0.00 36.81 1.75
1529 5459 2.679837 CAGCTGCGTTTGGTGATATTCT 59.320 45.455 0.00 0.00 35.20 2.40
1530 5460 3.871006 CAGCTGCGTTTGGTGATATTCTA 59.129 43.478 0.00 0.00 35.20 2.10
1531 5461 4.025396 CAGCTGCGTTTGGTGATATTCTAG 60.025 45.833 0.00 0.00 35.20 2.43
1532 5462 4.119862 GCTGCGTTTGGTGATATTCTAGA 58.880 43.478 0.00 0.00 0.00 2.43
1533 5463 4.210120 GCTGCGTTTGGTGATATTCTAGAG 59.790 45.833 0.00 0.00 0.00 2.43
1534 5464 5.339008 TGCGTTTGGTGATATTCTAGAGT 57.661 39.130 0.00 0.00 0.00 3.24
1535 5465 5.730550 TGCGTTTGGTGATATTCTAGAGTT 58.269 37.500 0.00 0.00 0.00 3.01
1536 5466 5.580691 TGCGTTTGGTGATATTCTAGAGTTG 59.419 40.000 0.00 0.00 0.00 3.16
1537 5467 5.502544 GCGTTTGGTGATATTCTAGAGTTGC 60.503 44.000 0.00 0.00 0.00 4.17
1538 5468 5.580691 CGTTTGGTGATATTCTAGAGTTGCA 59.419 40.000 0.00 0.00 0.00 4.08
1539 5469 6.092122 CGTTTGGTGATATTCTAGAGTTGCAA 59.908 38.462 0.00 0.00 0.00 4.08
1540 5470 7.201644 CGTTTGGTGATATTCTAGAGTTGCAAT 60.202 37.037 0.59 0.00 0.00 3.56
1541 5471 9.109393 GTTTGGTGATATTCTAGAGTTGCAATA 57.891 33.333 0.59 0.00 0.00 1.90
1542 5472 8.662781 TTGGTGATATTCTAGAGTTGCAATAC 57.337 34.615 0.59 0.00 0.00 1.89
1543 5473 8.023021 TGGTGATATTCTAGAGTTGCAATACT 57.977 34.615 0.59 7.97 0.00 2.12
1544 5474 9.143155 TGGTGATATTCTAGAGTTGCAATACTA 57.857 33.333 0.59 8.72 0.00 1.82
1556 5486 9.084164 AGAGTTGCAATACTATTGTAGTAAACG 57.916 33.333 0.59 0.00 43.82 3.60
1557 5487 7.681903 AGTTGCAATACTATTGTAGTAAACGC 58.318 34.615 0.59 5.35 43.82 4.84
1558 5488 6.263615 TGCAATACTATTGTAGTAAACGCG 57.736 37.500 3.53 3.53 43.82 6.01
1559 5489 5.232626 TGCAATACTATTGTAGTAAACGCGG 59.767 40.000 12.47 0.00 43.82 6.46
1560 5490 5.459762 GCAATACTATTGTAGTAAACGCGGA 59.540 40.000 12.47 0.00 43.82 5.54
1561 5491 6.019640 GCAATACTATTGTAGTAAACGCGGAA 60.020 38.462 12.47 0.00 43.82 4.30
1562 5492 7.332530 CAATACTATTGTAGTAAACGCGGAAC 58.667 38.462 12.47 5.23 43.82 3.62
1563 5493 5.027737 TACTATTGTAGTAAACGCGGAACG 58.972 41.667 12.47 0.00 46.54 3.95
1565 5495 5.391523 ACTATTGTAGTAAACGCGGAACGTA 60.392 40.000 12.47 0.00 46.41 3.57
1566 5496 6.840822 ACTATTGTAGTAAACGCGGAACGTAA 60.841 38.462 12.47 4.28 46.41 3.18
1567 5497 8.257572 ACTATTGTAGTAAACGCGGAACGTAAA 61.258 37.037 12.47 3.21 46.41 2.01
1583 5513 8.106467 GGAACGTAAAAATTCAAAAGTTTCGA 57.894 30.769 0.00 0.00 0.00 3.71
1584 5514 8.585436 GGAACGTAAAAATTCAAAAGTTTCGAA 58.415 29.630 0.00 0.00 0.00 3.71
1585 5515 9.940518 GAACGTAAAAATTCAAAAGTTTCGAAA 57.059 25.926 6.47 6.47 0.00 3.46
1606 5536 1.803334 TTTTTGCTCAGGATACGCGT 58.197 45.000 19.17 19.17 46.39 6.01
1607 5537 1.803334 TTTTGCTCAGGATACGCGTT 58.197 45.000 20.78 5.14 46.39 4.84
1608 5538 1.803334 TTTGCTCAGGATACGCGTTT 58.197 45.000 20.78 10.40 46.39 3.60
1609 5539 1.803334 TTGCTCAGGATACGCGTTTT 58.197 45.000 20.78 5.35 46.39 2.43
1610 5540 1.803334 TGCTCAGGATACGCGTTTTT 58.197 45.000 20.78 2.14 46.39 1.94
1611 5541 1.730064 TGCTCAGGATACGCGTTTTTC 59.270 47.619 20.78 12.56 46.39 2.29
1612 5542 1.266891 GCTCAGGATACGCGTTTTTCG 60.267 52.381 20.78 3.94 46.39 3.46
1613 5543 1.990563 CTCAGGATACGCGTTTTTCGT 59.009 47.619 20.78 11.36 46.39 3.85
1619 5549 3.955101 CGCGTTTTTCGTGGGGCA 61.955 61.111 0.00 0.00 44.94 5.36
1620 5550 2.413765 GCGTTTTTCGTGGGGCAA 59.586 55.556 0.00 0.00 42.13 4.52
1621 5551 1.947146 GCGTTTTTCGTGGGGCAAC 60.947 57.895 0.00 0.00 42.13 4.17
1622 5552 1.655959 CGTTTTTCGTGGGGCAACG 60.656 57.895 5.69 5.69 44.92 4.10
1627 5557 2.342279 TCGTGGGGCAACGAGAAG 59.658 61.111 10.16 0.00 46.99 2.85
1628 5558 3.423154 CGTGGGGCAACGAGAAGC 61.423 66.667 6.12 0.00 46.49 3.86
1629 5559 2.032681 GTGGGGCAACGAGAAGCT 59.967 61.111 0.00 0.00 37.60 3.74
1630 5560 2.035442 GTGGGGCAACGAGAAGCTC 61.035 63.158 0.00 0.00 37.60 4.09
1653 5583 2.669229 CCGCCCGGTAACCGTTTT 60.669 61.111 0.00 0.00 46.80 2.43
1654 5584 2.260154 CCGCCCGGTAACCGTTTTT 61.260 57.895 0.00 0.00 46.80 1.94
1655 5585 1.207339 CGCCCGGTAACCGTTTTTC 59.793 57.895 0.00 0.00 46.80 2.29
1656 5586 1.229975 CGCCCGGTAACCGTTTTTCT 61.230 55.000 0.00 0.00 46.80 2.52
1657 5587 0.518636 GCCCGGTAACCGTTTTTCTC 59.481 55.000 0.00 0.00 46.80 2.87
1658 5588 0.792031 CCCGGTAACCGTTTTTCTCG 59.208 55.000 0.00 0.00 46.80 4.04
1664 5594 2.667199 CCGTTTTTCTCGGGCGGT 60.667 61.111 0.00 0.00 43.68 5.68
1665 5595 1.374505 CCGTTTTTCTCGGGCGGTA 60.375 57.895 0.00 0.00 43.68 4.02
1666 5596 1.629345 CCGTTTTTCTCGGGCGGTAC 61.629 60.000 0.00 0.00 43.68 3.34
1667 5597 1.629345 CGTTTTTCTCGGGCGGTACC 61.629 60.000 0.16 0.16 37.93 3.34
1676 5606 4.426971 GGCGGTACCCAAAACCAT 57.573 55.556 6.25 0.00 36.78 3.55
1677 5607 1.887301 GGCGGTACCCAAAACCATG 59.113 57.895 6.25 0.00 36.78 3.66
1678 5608 1.214325 GCGGTACCCAAAACCATGC 59.786 57.895 6.25 0.00 36.78 4.06
1679 5609 1.248101 GCGGTACCCAAAACCATGCT 61.248 55.000 6.25 0.00 36.78 3.79
1680 5610 0.808755 CGGTACCCAAAACCATGCTC 59.191 55.000 6.25 0.00 36.78 4.26
1681 5611 1.182667 GGTACCCAAAACCATGCTCC 58.817 55.000 0.00 0.00 36.96 4.70
1682 5612 1.182667 GTACCCAAAACCATGCTCCC 58.817 55.000 0.00 0.00 0.00 4.30
1683 5613 1.080638 TACCCAAAACCATGCTCCCT 58.919 50.000 0.00 0.00 0.00 4.20
1684 5614 0.542702 ACCCAAAACCATGCTCCCTG 60.543 55.000 0.00 0.00 0.00 4.45
1925 5856 2.044252 AGAAGGAGCTCGCCCGTA 60.044 61.111 7.83 0.00 0.00 4.02
1962 5893 0.107945 GGCATCTTCTCCAAGAGCGT 60.108 55.000 0.00 0.00 42.13 5.07
2065 5996 1.668294 CTCTGTGGCCGTGTTCTCT 59.332 57.895 0.00 0.00 0.00 3.10
2212 6153 2.125512 GAGCGGTGCTTGGACGAT 60.126 61.111 0.00 0.00 39.88 3.73
2227 6168 1.026182 ACGATTGTGATGGCGCATGT 61.026 50.000 10.83 0.00 33.94 3.21
2229 6170 0.452987 GATTGTGATGGCGCATGTGT 59.547 50.000 10.83 0.00 33.94 3.72
2230 6171 0.171679 ATTGTGATGGCGCATGTGTG 59.828 50.000 10.83 0.00 33.94 3.82
2246 6187 0.764271 TGTGATGGTGTTCAGGAGCA 59.236 50.000 0.00 0.00 0.00 4.26
2248 6189 2.012673 GTGATGGTGTTCAGGAGCATC 58.987 52.381 0.00 0.00 44.86 3.91
2267 6208 0.606401 CGTGCAGACCAGGGTTTCAT 60.606 55.000 0.00 0.00 0.00 2.57
2296 6237 3.005897 ACATCATGACGCCTACCATCTAC 59.994 47.826 0.00 0.00 0.00 2.59
2303 6244 3.410508 ACGCCTACCATCTACTAGCTAC 58.589 50.000 0.00 0.00 0.00 3.58
2331 6274 8.050778 ACTCATGTGTACAAAGAAAAGAAACA 57.949 30.769 0.00 0.00 0.00 2.83
2351 6294 3.885297 ACACAATTAGATAGGCCATGTGC 59.115 43.478 5.01 0.00 40.10 4.57
2369 6312 5.994887 TGTGCATTTTACTGAACGTTACT 57.005 34.783 0.00 0.00 0.00 2.24
2371 6314 7.661127 TGTGCATTTTACTGAACGTTACTAT 57.339 32.000 0.00 0.00 0.00 2.12
2433 6382 3.754965 AGTGGATTTTGCTACAGCTCAA 58.245 40.909 2.44 0.00 42.66 3.02
2445 6394 6.639563 TGCTACAGCTCAAATGTTCATAGTA 58.360 36.000 2.44 0.00 42.66 1.82
2446 6395 6.535150 TGCTACAGCTCAAATGTTCATAGTAC 59.465 38.462 2.44 0.00 42.66 2.73
2447 6396 6.535150 GCTACAGCTCAAATGTTCATAGTACA 59.465 38.462 0.00 0.00 38.21 2.90
2448 6397 7.064609 GCTACAGCTCAAATGTTCATAGTACAA 59.935 37.037 0.00 0.00 38.21 2.41
2449 6398 7.369803 ACAGCTCAAATGTTCATAGTACAAG 57.630 36.000 0.00 0.00 0.00 3.16
2450 6399 6.372659 ACAGCTCAAATGTTCATAGTACAAGG 59.627 38.462 0.00 0.00 0.00 3.61
2451 6400 6.372659 CAGCTCAAATGTTCATAGTACAAGGT 59.627 38.462 0.00 0.00 0.00 3.50
2452 6401 6.372659 AGCTCAAATGTTCATAGTACAAGGTG 59.627 38.462 0.00 0.00 0.00 4.00
2453 6402 6.149474 GCTCAAATGTTCATAGTACAAGGTGT 59.851 38.462 0.00 0.00 0.00 4.16
2454 6403 7.624344 GCTCAAATGTTCATAGTACAAGGTGTC 60.624 40.741 0.00 0.00 0.00 3.67
2455 6404 7.450074 TCAAATGTTCATAGTACAAGGTGTCT 58.550 34.615 0.00 0.00 0.00 3.41
2456 6405 7.602644 TCAAATGTTCATAGTACAAGGTGTCTC 59.397 37.037 0.00 0.00 0.00 3.36
2457 6406 6.605471 ATGTTCATAGTACAAGGTGTCTCA 57.395 37.500 0.00 0.00 0.00 3.27
2458 6407 6.025749 TGTTCATAGTACAAGGTGTCTCAG 57.974 41.667 0.00 0.00 0.00 3.35
2459 6408 5.538813 TGTTCATAGTACAAGGTGTCTCAGT 59.461 40.000 0.00 0.00 0.00 3.41
2460 6409 6.041637 TGTTCATAGTACAAGGTGTCTCAGTT 59.958 38.462 0.00 0.00 0.00 3.16
2461 6410 6.665992 TCATAGTACAAGGTGTCTCAGTTT 57.334 37.500 0.00 0.00 0.00 2.66
2462 6411 6.688578 TCATAGTACAAGGTGTCTCAGTTTC 58.311 40.000 0.00 0.00 0.00 2.78
2463 6412 6.493802 TCATAGTACAAGGTGTCTCAGTTTCT 59.506 38.462 0.00 0.00 0.00 2.52
2464 6413 5.615925 AGTACAAGGTGTCTCAGTTTCTT 57.384 39.130 0.00 0.00 0.00 2.52
2465 6414 6.726490 AGTACAAGGTGTCTCAGTTTCTTA 57.274 37.500 0.00 0.00 0.00 2.10
2466 6415 7.304497 AGTACAAGGTGTCTCAGTTTCTTAT 57.696 36.000 0.00 0.00 0.00 1.73
2467 6416 7.736893 AGTACAAGGTGTCTCAGTTTCTTATT 58.263 34.615 0.00 0.00 0.00 1.40
2468 6417 7.873505 AGTACAAGGTGTCTCAGTTTCTTATTC 59.126 37.037 0.00 0.00 0.00 1.75
2469 6418 6.831976 ACAAGGTGTCTCAGTTTCTTATTCT 58.168 36.000 0.00 0.00 0.00 2.40
2470 6419 6.708054 ACAAGGTGTCTCAGTTTCTTATTCTG 59.292 38.462 0.00 0.00 0.00 3.02
2471 6420 6.426646 AGGTGTCTCAGTTTCTTATTCTGT 57.573 37.500 0.00 0.00 0.00 3.41
2472 6421 6.831976 AGGTGTCTCAGTTTCTTATTCTGTT 58.168 36.000 0.00 0.00 0.00 3.16
2473 6422 7.963532 AGGTGTCTCAGTTTCTTATTCTGTTA 58.036 34.615 0.00 0.00 0.00 2.41
2474 6423 8.598041 AGGTGTCTCAGTTTCTTATTCTGTTAT 58.402 33.333 0.00 0.00 0.00 1.89
2475 6424 9.220767 GGTGTCTCAGTTTCTTATTCTGTTATT 57.779 33.333 0.00 0.00 0.00 1.40
2494 6443 8.648557 TGTTATTTACAGATGCAGTTAGCTAG 57.351 34.615 0.00 0.00 36.82 3.42
2495 6444 8.258007 TGTTATTTACAGATGCAGTTAGCTAGT 58.742 33.333 0.00 0.00 36.82 2.57
2496 6445 8.543774 GTTATTTACAGATGCAGTTAGCTAGTG 58.456 37.037 0.00 0.00 45.94 2.74
2497 6446 5.661056 TTACAGATGCAGTTAGCTAGTGT 57.339 39.130 0.00 0.00 45.94 3.55
2498 6447 3.854666 ACAGATGCAGTTAGCTAGTGTG 58.145 45.455 0.00 0.00 45.94 3.82
2499 6448 2.606725 CAGATGCAGTTAGCTAGTGTGC 59.393 50.000 14.13 14.13 45.94 4.57
2501 6450 2.542020 TGCAGTTAGCTAGTGTGCAA 57.458 45.000 18.99 7.67 45.94 4.08
2502 6451 2.844946 TGCAGTTAGCTAGTGTGCAAA 58.155 42.857 18.99 3.25 45.94 3.68
2503 6452 2.807967 TGCAGTTAGCTAGTGTGCAAAG 59.192 45.455 18.99 0.00 45.94 2.77
2504 6453 2.413371 GCAGTTAGCTAGTGTGCAAAGC 60.413 50.000 15.47 0.00 41.15 3.51
2531 6480 2.131183 GGCTACAGATCAATCGACTGC 58.869 52.381 0.00 0.00 35.38 4.40
2652 6604 5.595952 ACAGAAAGAAAGCCTCAGAACATTT 59.404 36.000 0.00 0.00 0.00 2.32
2694 6646 4.974645 TCTTTAGCCCAGAGAGAAAACA 57.025 40.909 0.00 0.00 0.00 2.83
2744 6698 3.884091 AGTTATCGTACAGCTCACTAGGG 59.116 47.826 0.00 0.00 0.00 3.53
2788 6862 1.092921 GTTGCTCGACACCCACACAA 61.093 55.000 0.00 0.00 0.00 3.33
2803 8290 0.827089 CACAACTGCCACCATGGGAA 60.827 55.000 18.09 0.00 37.44 3.97
2873 8360 3.258372 ACTTGTCCAGACGATTCTTGCTA 59.742 43.478 0.00 0.00 0.00 3.49
2892 8379 1.944177 AGCAGCTACCTTCTCCTTCA 58.056 50.000 0.00 0.00 0.00 3.02
2992 8500 2.127251 GCAGGAAAAGCAAAACGAAGG 58.873 47.619 0.00 0.00 0.00 3.46
3106 8621 8.650143 ATTACAGGGTTGAATTCATAACACTT 57.350 30.769 11.57 7.17 38.42 3.16
3108 8623 9.575868 TTACAGGGTTGAATTCATAACACTTTA 57.424 29.630 11.57 7.98 38.42 1.85
3109 8624 7.882179 ACAGGGTTGAATTCATAACACTTTAC 58.118 34.615 11.57 2.97 38.42 2.01
3110 8625 7.039993 ACAGGGTTGAATTCATAACACTTTACC 60.040 37.037 11.57 10.95 38.42 2.85
3111 8626 7.176690 CAGGGTTGAATTCATAACACTTTACCT 59.823 37.037 11.57 5.36 38.42 3.08
3112 8627 7.728532 AGGGTTGAATTCATAACACTTTACCTT 59.271 33.333 9.40 4.07 37.24 3.50
3113 8628 8.027189 GGGTTGAATTCATAACACTTTACCTTC 58.973 37.037 9.40 0.00 0.00 3.46
3114 8629 8.573035 GGTTGAATTCATAACACTTTACCTTCA 58.427 33.333 9.40 0.00 0.00 3.02
3151 8666 5.163953 CCTCAAAATACTAGACTTGCACACG 60.164 44.000 0.00 0.00 0.00 4.49
3245 8760 6.142798 GCACATTCATCATAGTAAAATTGCGG 59.857 38.462 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 5.579511 CCATCAAATTTTTCATCCAGCTGAC 59.420 40.000 17.39 0.00 0.00 3.51
39 40 5.481122 TCCATCAAATTTTTCATCCAGCTGA 59.519 36.000 17.39 1.21 0.00 4.26
57 58 1.630369 CTCCCACTTTGTCCTCCATCA 59.370 52.381 0.00 0.00 0.00 3.07
158 161 8.371699 ACTCTTATAATACTTCATGAAGGGAGC 58.628 37.037 33.11 0.00 42.53 4.70
189 192 1.001764 CAGATGAGCCTGGGCACAA 60.002 57.895 14.90 0.10 44.05 3.33
190 193 2.672908 CAGATGAGCCTGGGCACA 59.327 61.111 13.49 13.49 44.85 4.57
247 260 7.148154 ACGCACTAAATTTTCTACCATGCAATA 60.148 33.333 0.00 0.00 0.00 1.90
393 409 4.569943 TGGACATTTGAGTAGCTCTTGAC 58.430 43.478 0.00 0.00 0.00 3.18
396 413 6.240894 TCATTTGGACATTTGAGTAGCTCTT 58.759 36.000 0.00 0.00 0.00 2.85
424 441 3.187842 GCGTGAGGTCCGTTCTAATTTTT 59.812 43.478 0.00 0.00 0.00 1.94
434 451 1.594293 CTTTGTGCGTGAGGTCCGT 60.594 57.895 0.00 0.00 0.00 4.69
448 465 8.586570 TTGTTTTTGCATGGTAGATAACTTTG 57.413 30.769 0.00 0.00 0.00 2.77
449 466 9.777297 AATTGTTTTTGCATGGTAGATAACTTT 57.223 25.926 0.00 0.00 0.00 2.66
452 469 7.816995 TCCAATTGTTTTTGCATGGTAGATAAC 59.183 33.333 4.43 0.00 0.00 1.89
587 634 8.562052 TGAGCTATGCAATGTTAATTCATACTG 58.438 33.333 0.00 0.00 0.00 2.74
641 1612 2.484062 CGCATTAAGGGCCAGCCAG 61.484 63.158 11.50 0.00 37.98 4.85
707 4562 3.499737 CGCCCGGTCAAGATGCAC 61.500 66.667 0.00 0.00 0.00 4.57
765 4624 1.174712 ATTAGGATGGCCGTGCATGC 61.175 55.000 19.68 11.82 39.96 4.06
774 4633 3.535561 CGATGGATGGTATTAGGATGGC 58.464 50.000 0.00 0.00 0.00 4.40
776 4635 3.535561 GGCGATGGATGGTATTAGGATG 58.464 50.000 0.00 0.00 0.00 3.51
781 4640 0.036765 GGCGGCGATGGATGGTATTA 60.037 55.000 12.98 0.00 0.00 0.98
859 4723 2.279186 GTGGTTGCACGTTTGGGC 60.279 61.111 0.00 0.00 0.00 5.36
864 4728 2.331019 GAAAGCGGTGGTTGCACGTT 62.331 55.000 0.00 0.00 33.85 3.99
1228 5158 3.253230 CATTCGGAATCCAAAACCTTGC 58.747 45.455 0.00 0.00 0.00 4.01
1229 5159 3.509575 TCCATTCGGAATCCAAAACCTTG 59.490 43.478 0.00 0.00 38.83 3.61
1230 5160 3.509967 GTCCATTCGGAATCCAAAACCTT 59.490 43.478 0.00 0.00 45.20 3.50
1231 5161 3.089284 GTCCATTCGGAATCCAAAACCT 58.911 45.455 0.00 0.00 45.20 3.50
1232 5162 2.159435 CGTCCATTCGGAATCCAAAACC 60.159 50.000 0.00 0.00 45.20 3.27
1233 5163 2.745281 TCGTCCATTCGGAATCCAAAAC 59.255 45.455 0.00 0.00 45.20 2.43
1234 5164 3.060736 TCGTCCATTCGGAATCCAAAA 57.939 42.857 0.00 0.00 45.20 2.44
1235 5165 2.772077 TCGTCCATTCGGAATCCAAA 57.228 45.000 0.00 0.00 45.20 3.28
1236 5166 2.772077 TTCGTCCATTCGGAATCCAA 57.228 45.000 0.00 0.00 45.20 3.53
1237 5167 3.275617 AATTCGTCCATTCGGAATCCA 57.724 42.857 0.00 0.00 45.20 3.41
1238 5168 4.335594 AGAAAATTCGTCCATTCGGAATCC 59.664 41.667 0.00 0.00 45.20 3.01
1239 5169 5.485662 AGAAAATTCGTCCATTCGGAATC 57.514 39.130 0.00 0.00 45.20 2.52
1240 5170 4.034048 CGAGAAAATTCGTCCATTCGGAAT 59.966 41.667 0.00 0.00 45.20 3.01
1241 5171 3.369756 CGAGAAAATTCGTCCATTCGGAA 59.630 43.478 0.00 0.00 45.20 4.30
1242 5172 2.927477 CGAGAAAATTCGTCCATTCGGA 59.073 45.455 0.00 0.00 39.79 4.55
1243 5173 3.304382 CGAGAAAATTCGTCCATTCGG 57.696 47.619 0.00 0.00 35.91 4.30
1274 5204 1.482593 ACCATGGTGACCGAGAATCTC 59.517 52.381 18.99 0.00 0.00 2.75
1275 5205 1.573108 ACCATGGTGACCGAGAATCT 58.427 50.000 18.99 0.00 0.00 2.40
1276 5206 2.403252 AACCATGGTGACCGAGAATC 57.597 50.000 20.60 0.00 0.00 2.52
1277 5207 2.093128 GGTAACCATGGTGACCGAGAAT 60.093 50.000 32.07 10.25 39.62 2.40
1278 5208 1.276989 GGTAACCATGGTGACCGAGAA 59.723 52.381 32.07 2.90 39.62 2.87
1279 5209 0.899720 GGTAACCATGGTGACCGAGA 59.100 55.000 32.07 4.05 39.62 4.04
1280 5210 3.453559 GGTAACCATGGTGACCGAG 57.546 57.895 32.07 0.00 39.62 4.63
1283 5213 0.899720 TCTCGGTAACCATGGTGACC 59.100 55.000 34.58 34.58 44.43 4.02
1284 5214 2.754946 TTCTCGGTAACCATGGTGAC 57.245 50.000 22.87 22.87 0.00 3.67
1285 5215 3.992943 ATTTCTCGGTAACCATGGTGA 57.007 42.857 20.60 8.41 0.00 4.02
1286 5216 3.875134 GGTATTTCTCGGTAACCATGGTG 59.125 47.826 20.60 5.79 0.00 4.17
1287 5217 3.431207 CGGTATTTCTCGGTAACCATGGT 60.431 47.826 13.00 13.00 0.00 3.55
1288 5218 3.128349 CGGTATTTCTCGGTAACCATGG 58.872 50.000 11.19 11.19 0.00 3.66
1289 5219 4.049546 TCGGTATTTCTCGGTAACCATG 57.950 45.455 0.00 0.00 0.00 3.66
1290 5220 4.081531 TGTTCGGTATTTCTCGGTAACCAT 60.082 41.667 0.00 0.00 0.00 3.55
1291 5221 3.257873 TGTTCGGTATTTCTCGGTAACCA 59.742 43.478 0.00 0.00 0.00 3.67
1292 5222 3.848726 TGTTCGGTATTTCTCGGTAACC 58.151 45.455 0.00 0.00 0.00 2.85
1293 5223 7.704789 AATATGTTCGGTATTTCTCGGTAAC 57.295 36.000 0.00 0.00 0.00 2.50
1294 5224 7.167968 CGAAATATGTTCGGTATTTCTCGGTAA 59.832 37.037 13.53 0.00 42.35 2.85
1295 5225 6.638063 CGAAATATGTTCGGTATTTCTCGGTA 59.362 38.462 13.53 0.00 42.35 4.02
1296 5226 5.461078 CGAAATATGTTCGGTATTTCTCGGT 59.539 40.000 13.53 0.00 42.35 4.69
1297 5227 5.901509 CGAAATATGTTCGGTATTTCTCGG 58.098 41.667 13.53 0.15 42.35 4.63
1341 5271 9.504710 TCGAACTTAAAACAATTTGAATTCGAA 57.495 25.926 10.57 10.57 40.63 3.71
1342 5272 9.672086 ATCGAACTTAAAACAATTTGAATTCGA 57.328 25.926 12.35 12.35 45.48 3.71
1371 5301 8.584157 TGCACAATATTGGTTCAACTTTTATCT 58.416 29.630 19.37 0.00 0.00 1.98
1372 5302 8.647226 GTGCACAATATTGGTTCAACTTTTATC 58.353 33.333 19.37 0.00 0.00 1.75
1373 5303 8.147058 TGTGCACAATATTGGTTCAACTTTTAT 58.853 29.630 19.28 0.00 0.00 1.40
1374 5304 7.492524 TGTGCACAATATTGGTTCAACTTTTA 58.507 30.769 19.28 0.00 0.00 1.52
1375 5305 6.344500 TGTGCACAATATTGGTTCAACTTTT 58.656 32.000 19.28 0.00 0.00 2.27
1376 5306 5.911752 TGTGCACAATATTGGTTCAACTTT 58.088 33.333 19.28 0.00 0.00 2.66
1377 5307 5.301551 TCTGTGCACAATATTGGTTCAACTT 59.698 36.000 21.98 0.00 0.00 2.66
1378 5308 4.826733 TCTGTGCACAATATTGGTTCAACT 59.173 37.500 21.98 0.00 0.00 3.16
1379 5309 5.119931 TCTGTGCACAATATTGGTTCAAC 57.880 39.130 21.98 10.26 0.00 3.18
1380 5310 4.826733 ACTCTGTGCACAATATTGGTTCAA 59.173 37.500 21.98 1.92 0.00 2.69
1381 5311 4.397420 ACTCTGTGCACAATATTGGTTCA 58.603 39.130 21.98 10.63 0.00 3.18
1382 5312 5.156355 CAACTCTGTGCACAATATTGGTTC 58.844 41.667 21.98 8.33 0.00 3.62
1383 5313 4.022068 CCAACTCTGTGCACAATATTGGTT 60.022 41.667 30.05 20.86 31.50 3.67
1384 5314 3.507233 CCAACTCTGTGCACAATATTGGT 59.493 43.478 30.05 17.66 31.50 3.67
1385 5315 3.507233 ACCAACTCTGTGCACAATATTGG 59.493 43.478 33.33 33.33 37.15 3.16
1386 5316 4.771590 ACCAACTCTGTGCACAATATTG 57.228 40.909 21.98 21.57 0.00 1.90
1387 5317 4.396166 GCTACCAACTCTGTGCACAATATT 59.604 41.667 21.98 11.79 0.00 1.28
1388 5318 3.941483 GCTACCAACTCTGTGCACAATAT 59.059 43.478 21.98 5.76 0.00 1.28
1389 5319 3.244387 TGCTACCAACTCTGTGCACAATA 60.244 43.478 21.98 11.07 0.00 1.90
1390 5320 2.154462 GCTACCAACTCTGTGCACAAT 58.846 47.619 21.98 6.54 0.00 2.71
1391 5321 1.134250 TGCTACCAACTCTGTGCACAA 60.134 47.619 21.98 10.91 0.00 3.33
1392 5322 0.467804 TGCTACCAACTCTGTGCACA 59.532 50.000 20.37 20.37 0.00 4.57
1393 5323 0.868406 GTGCTACCAACTCTGTGCAC 59.132 55.000 10.75 10.75 42.69 4.57
1394 5324 0.250295 GGTGCTACCAACTCTGTGCA 60.250 55.000 1.01 0.00 38.42 4.57
1395 5325 0.955919 GGGTGCTACCAACTCTGTGC 60.956 60.000 7.49 0.00 41.02 4.57
1396 5326 0.321653 GGGGTGCTACCAACTCTGTG 60.322 60.000 7.49 0.00 41.02 3.66
1397 5327 0.766674 TGGGGTGCTACCAACTCTGT 60.767 55.000 7.49 0.00 41.02 3.41
1398 5328 0.036010 CTGGGGTGCTACCAACTCTG 60.036 60.000 7.49 0.00 41.02 3.35
1399 5329 0.473886 ACTGGGGTGCTACCAACTCT 60.474 55.000 7.49 0.00 41.02 3.24
1400 5330 0.321653 CACTGGGGTGCTACCAACTC 60.322 60.000 7.49 0.00 41.02 3.01
1401 5331 1.761174 CACTGGGGTGCTACCAACT 59.239 57.895 7.49 0.00 41.02 3.16
1402 5332 1.303317 CCACTGGGGTGCTACCAAC 60.303 63.158 7.49 1.41 41.02 3.77
1403 5333 1.063070 TTCCACTGGGGTGCTACCAA 61.063 55.000 0.00 0.00 41.02 3.67
1404 5334 0.844661 ATTCCACTGGGGTGCTACCA 60.845 55.000 0.00 1.69 41.02 3.25
1405 5335 0.394352 CATTCCACTGGGGTGCTACC 60.394 60.000 0.00 0.00 41.75 3.18
1406 5336 0.328258 ACATTCCACTGGGGTGCTAC 59.672 55.000 0.00 0.00 41.75 3.58
1407 5337 0.618458 GACATTCCACTGGGGTGCTA 59.382 55.000 0.00 0.00 41.75 3.49
1408 5338 1.136329 AGACATTCCACTGGGGTGCT 61.136 55.000 0.00 0.00 41.75 4.40
1409 5339 0.251341 AAGACATTCCACTGGGGTGC 60.251 55.000 0.00 0.00 41.75 5.01
1410 5340 1.538047 CAAGACATTCCACTGGGGTG 58.462 55.000 0.00 0.00 42.65 4.61
1411 5341 0.405585 CCAAGACATTCCACTGGGGT 59.594 55.000 0.00 0.00 38.11 4.95
1412 5342 0.698238 TCCAAGACATTCCACTGGGG 59.302 55.000 0.00 0.00 38.37 4.96
1413 5343 1.826385 GTCCAAGACATTCCACTGGG 58.174 55.000 0.00 0.00 32.09 4.45
1414 5344 1.442769 CGTCCAAGACATTCCACTGG 58.557 55.000 0.00 0.00 32.09 4.00
1415 5345 0.798776 GCGTCCAAGACATTCCACTG 59.201 55.000 0.00 0.00 32.09 3.66
1416 5346 0.670546 CGCGTCCAAGACATTCCACT 60.671 55.000 0.00 0.00 32.09 4.00
1417 5347 1.787847 CGCGTCCAAGACATTCCAC 59.212 57.895 0.00 0.00 32.09 4.02
1418 5348 2.032634 GCGCGTCCAAGACATTCCA 61.033 57.895 8.43 0.00 32.09 3.53
1419 5349 0.459585 TAGCGCGTCCAAGACATTCC 60.460 55.000 8.43 0.00 32.09 3.01
1420 5350 1.324736 CTTAGCGCGTCCAAGACATTC 59.675 52.381 8.43 0.00 32.09 2.67
1421 5351 1.337823 ACTTAGCGCGTCCAAGACATT 60.338 47.619 18.80 0.00 32.09 2.71
1422 5352 0.246635 ACTTAGCGCGTCCAAGACAT 59.753 50.000 18.80 0.00 32.09 3.06
1423 5353 0.883153 TACTTAGCGCGTCCAAGACA 59.117 50.000 18.80 7.21 32.09 3.41
1424 5354 1.986698 TTACTTAGCGCGTCCAAGAC 58.013 50.000 18.80 0.00 0.00 3.01
1425 5355 2.229543 TCTTTACTTAGCGCGTCCAAGA 59.770 45.455 18.80 11.64 0.00 3.02
1426 5356 2.599082 CTCTTTACTTAGCGCGTCCAAG 59.401 50.000 8.43 11.22 0.00 3.61
1427 5357 2.602878 CTCTTTACTTAGCGCGTCCAA 58.397 47.619 8.43 0.00 0.00 3.53
1428 5358 1.135199 CCTCTTTACTTAGCGCGTCCA 60.135 52.381 8.43 0.00 0.00 4.02
1429 5359 1.135170 ACCTCTTTACTTAGCGCGTCC 60.135 52.381 8.43 0.00 0.00 4.79
1430 5360 2.183636 GACCTCTTTACTTAGCGCGTC 58.816 52.381 8.43 0.00 0.00 5.19
1431 5361 1.467035 CGACCTCTTTACTTAGCGCGT 60.467 52.381 8.43 0.00 0.00 6.01
1432 5362 1.189403 CGACCTCTTTACTTAGCGCG 58.811 55.000 0.00 0.00 0.00 6.86
1433 5363 0.922032 GCGACCTCTTTACTTAGCGC 59.078 55.000 0.00 0.00 36.35 5.92
1434 5364 2.273370 TGCGACCTCTTTACTTAGCG 57.727 50.000 0.00 0.00 0.00 4.26
1435 5365 4.451435 ACTTTTGCGACCTCTTTACTTAGC 59.549 41.667 0.00 0.00 0.00 3.09
1436 5366 6.018180 ACAACTTTTGCGACCTCTTTACTTAG 60.018 38.462 0.00 0.00 0.00 2.18
1437 5367 5.818857 ACAACTTTTGCGACCTCTTTACTTA 59.181 36.000 0.00 0.00 0.00 2.24
1438 5368 4.638865 ACAACTTTTGCGACCTCTTTACTT 59.361 37.500 0.00 0.00 0.00 2.24
1439 5369 4.035208 CACAACTTTTGCGACCTCTTTACT 59.965 41.667 0.00 0.00 0.00 2.24
1440 5370 4.279659 CACAACTTTTGCGACCTCTTTAC 58.720 43.478 0.00 0.00 0.00 2.01
1441 5371 3.242936 GCACAACTTTTGCGACCTCTTTA 60.243 43.478 0.00 0.00 0.00 1.85
1442 5372 2.479560 GCACAACTTTTGCGACCTCTTT 60.480 45.455 0.00 0.00 0.00 2.52
1443 5373 1.065551 GCACAACTTTTGCGACCTCTT 59.934 47.619 0.00 0.00 0.00 2.85
1444 5374 0.663153 GCACAACTTTTGCGACCTCT 59.337 50.000 0.00 0.00 0.00 3.69
1445 5375 0.317854 GGCACAACTTTTGCGACCTC 60.318 55.000 0.00 0.00 41.18 3.85
1446 5376 1.034838 TGGCACAACTTTTGCGACCT 61.035 50.000 0.00 0.00 41.18 3.85
1447 5377 1.435515 TGGCACAACTTTTGCGACC 59.564 52.632 0.00 0.00 41.18 4.79
1459 5389 0.893270 CGATTCCCACCTTTGGCACA 60.893 55.000 0.00 0.00 42.35 4.57
1460 5390 0.608035 TCGATTCCCACCTTTGGCAC 60.608 55.000 0.00 0.00 42.35 5.01
1461 5391 0.111446 TTCGATTCCCACCTTTGGCA 59.889 50.000 0.00 0.00 42.35 4.92
1462 5392 0.526211 GTTCGATTCCCACCTTTGGC 59.474 55.000 0.00 0.00 42.35 4.52
1463 5393 1.812571 CTGTTCGATTCCCACCTTTGG 59.187 52.381 0.00 0.00 43.50 3.28
1464 5394 2.504367 ACTGTTCGATTCCCACCTTTG 58.496 47.619 0.00 0.00 0.00 2.77
1465 5395 2.951229 ACTGTTCGATTCCCACCTTT 57.049 45.000 0.00 0.00 0.00 3.11
1466 5396 2.904434 ACTACTGTTCGATTCCCACCTT 59.096 45.455 0.00 0.00 0.00 3.50
1467 5397 2.537143 ACTACTGTTCGATTCCCACCT 58.463 47.619 0.00 0.00 0.00 4.00
1468 5398 3.698040 TCTACTACTGTTCGATTCCCACC 59.302 47.826 0.00 0.00 0.00 4.61
1469 5399 4.439837 GGTCTACTACTGTTCGATTCCCAC 60.440 50.000 0.00 0.00 0.00 4.61
1470 5400 3.698040 GGTCTACTACTGTTCGATTCCCA 59.302 47.826 0.00 0.00 0.00 4.37
1471 5401 3.952967 AGGTCTACTACTGTTCGATTCCC 59.047 47.826 0.00 0.00 0.00 3.97
1472 5402 6.880942 ATAGGTCTACTACTGTTCGATTCC 57.119 41.667 0.00 0.00 33.70 3.01
1473 5403 7.443575 TGGTATAGGTCTACTACTGTTCGATTC 59.556 40.741 0.00 0.00 33.70 2.52
1474 5404 7.228308 GTGGTATAGGTCTACTACTGTTCGATT 59.772 40.741 0.00 0.00 33.70 3.34
1475 5405 6.709846 GTGGTATAGGTCTACTACTGTTCGAT 59.290 42.308 0.00 0.00 33.70 3.59
1476 5406 6.051717 GTGGTATAGGTCTACTACTGTTCGA 58.948 44.000 0.00 0.00 33.70 3.71
1477 5407 5.238214 GGTGGTATAGGTCTACTACTGTTCG 59.762 48.000 0.00 0.00 34.54 3.95
1478 5408 5.238214 CGGTGGTATAGGTCTACTACTGTTC 59.762 48.000 0.00 0.00 35.73 3.18
1479 5409 5.128919 CGGTGGTATAGGTCTACTACTGTT 58.871 45.833 0.00 0.00 35.73 3.16
1480 5410 4.712476 CGGTGGTATAGGTCTACTACTGT 58.288 47.826 0.00 0.00 35.73 3.55
1481 5411 3.501445 GCGGTGGTATAGGTCTACTACTG 59.499 52.174 3.11 3.11 40.51 2.74
1482 5412 3.749226 GCGGTGGTATAGGTCTACTACT 58.251 50.000 0.00 0.00 34.54 2.57
1483 5413 2.481952 CGCGGTGGTATAGGTCTACTAC 59.518 54.545 0.00 0.00 33.70 2.73
1484 5414 2.771089 CGCGGTGGTATAGGTCTACTA 58.229 52.381 0.00 0.00 35.80 1.82
1485 5415 1.602311 CGCGGTGGTATAGGTCTACT 58.398 55.000 0.00 0.00 0.00 2.57
1486 5416 0.039708 GCGCGGTGGTATAGGTCTAC 60.040 60.000 8.83 0.00 0.00 2.59
1487 5417 1.174712 GGCGCGGTGGTATAGGTCTA 61.175 60.000 8.83 0.00 0.00 2.59
1488 5418 2.496291 GGCGCGGTGGTATAGGTCT 61.496 63.158 8.83 0.00 0.00 3.85
1489 5419 2.028631 GGCGCGGTGGTATAGGTC 59.971 66.667 8.83 0.00 0.00 3.85
1490 5420 2.760799 TGGCGCGGTGGTATAGGT 60.761 61.111 8.83 0.00 0.00 3.08
1491 5421 2.279918 GTGGCGCGGTGGTATAGG 60.280 66.667 8.83 0.00 0.00 2.57
1492 5422 1.591594 CTGTGGCGCGGTGGTATAG 60.592 63.158 8.83 0.00 0.00 1.31
1493 5423 2.497293 CTGTGGCGCGGTGGTATA 59.503 61.111 8.83 0.00 0.00 1.47
1504 5434 3.595758 ACCAAACGCAGCTGTGGC 61.596 61.111 29.60 8.40 34.27 5.01
1505 5435 1.518056 ATCACCAAACGCAGCTGTGG 61.518 55.000 29.60 23.15 37.17 4.17
1506 5436 1.155889 TATCACCAAACGCAGCTGTG 58.844 50.000 25.37 25.37 0.00 3.66
1507 5437 2.113860 ATATCACCAAACGCAGCTGT 57.886 45.000 16.64 0.00 0.00 4.40
1508 5438 2.679837 AGAATATCACCAAACGCAGCTG 59.320 45.455 10.11 10.11 0.00 4.24
1509 5439 2.991250 AGAATATCACCAAACGCAGCT 58.009 42.857 0.00 0.00 0.00 4.24
1510 5440 4.119862 TCTAGAATATCACCAAACGCAGC 58.880 43.478 0.00 0.00 0.00 5.25
1511 5441 5.352284 ACTCTAGAATATCACCAAACGCAG 58.648 41.667 0.00 0.00 0.00 5.18
1512 5442 5.339008 ACTCTAGAATATCACCAAACGCA 57.661 39.130 0.00 0.00 0.00 5.24
1513 5443 5.502544 GCAACTCTAGAATATCACCAAACGC 60.503 44.000 0.00 0.00 0.00 4.84
1514 5444 5.580691 TGCAACTCTAGAATATCACCAAACG 59.419 40.000 0.00 0.00 0.00 3.60
1515 5445 6.985188 TGCAACTCTAGAATATCACCAAAC 57.015 37.500 0.00 0.00 0.00 2.93
1516 5446 9.109393 GTATTGCAACTCTAGAATATCACCAAA 57.891 33.333 0.00 0.00 0.00 3.28
1517 5447 8.486210 AGTATTGCAACTCTAGAATATCACCAA 58.514 33.333 0.00 0.00 0.00 3.67
1518 5448 8.023021 AGTATTGCAACTCTAGAATATCACCA 57.977 34.615 0.00 0.00 0.00 4.17
1530 5460 9.084164 CGTTTACTACAATAGTATTGCAACTCT 57.916 33.333 20.52 5.84 40.66 3.24
1531 5461 7.844653 GCGTTTACTACAATAGTATTGCAACTC 59.155 37.037 20.52 8.85 40.66 3.01
1532 5462 7.463648 CGCGTTTACTACAATAGTATTGCAACT 60.464 37.037 20.52 0.00 40.66 3.16
1533 5463 6.622183 CGCGTTTACTACAATAGTATTGCAAC 59.378 38.462 20.52 14.19 40.66 4.17
1534 5464 6.237888 CCGCGTTTACTACAATAGTATTGCAA 60.238 38.462 20.52 0.00 40.66 4.08
1535 5465 5.232626 CCGCGTTTACTACAATAGTATTGCA 59.767 40.000 20.52 8.97 40.66 4.08
1536 5466 5.459762 TCCGCGTTTACTACAATAGTATTGC 59.540 40.000 20.52 4.72 40.66 3.56
1537 5467 7.332530 GTTCCGCGTTTACTACAATAGTATTG 58.667 38.462 19.28 19.28 40.66 1.90
1538 5468 6.197096 CGTTCCGCGTTTACTACAATAGTATT 59.803 38.462 4.92 0.00 37.18 1.89
1539 5469 5.682862 CGTTCCGCGTTTACTACAATAGTAT 59.317 40.000 4.92 0.00 37.18 2.12
1540 5470 5.027737 CGTTCCGCGTTTACTACAATAGTA 58.972 41.667 4.92 0.00 36.70 1.82
1541 5471 3.853671 CGTTCCGCGTTTACTACAATAGT 59.146 43.478 4.92 0.00 38.07 2.12
1542 5472 4.412694 CGTTCCGCGTTTACTACAATAG 57.587 45.455 4.92 0.00 35.54 1.73
1556 5486 5.876576 ACTTTTGAATTTTTACGTTCCGC 57.123 34.783 0.00 0.00 0.00 5.54
1557 5487 7.044836 TCGAAACTTTTGAATTTTTACGTTCCG 60.045 33.333 0.00 0.00 0.00 4.30
1558 5488 8.106467 TCGAAACTTTTGAATTTTTACGTTCC 57.894 30.769 0.00 0.00 0.00 3.62
1559 5489 9.940518 TTTCGAAACTTTTGAATTTTTACGTTC 57.059 25.926 6.47 0.00 0.00 3.95
1587 5517 1.803334 ACGCGTATCCTGAGCAAAAA 58.197 45.000 11.67 0.00 0.00 1.94
1588 5518 1.803334 AACGCGTATCCTGAGCAAAA 58.197 45.000 14.46 0.00 0.00 2.44
1589 5519 1.803334 AAACGCGTATCCTGAGCAAA 58.197 45.000 14.46 0.00 0.00 3.68
1590 5520 1.803334 AAAACGCGTATCCTGAGCAA 58.197 45.000 14.46 0.00 0.00 3.91
1591 5521 1.730064 GAAAAACGCGTATCCTGAGCA 59.270 47.619 14.46 0.00 0.00 4.26
1592 5522 1.266891 CGAAAAACGCGTATCCTGAGC 60.267 52.381 14.46 0.00 34.51 4.26
1593 5523 1.990563 ACGAAAAACGCGTATCCTGAG 59.009 47.619 14.46 3.73 46.94 3.35
1594 5524 1.722464 CACGAAAAACGCGTATCCTGA 59.278 47.619 14.46 0.00 46.94 3.86
1595 5525 1.201877 CCACGAAAAACGCGTATCCTG 60.202 52.381 14.46 11.28 46.94 3.86
1596 5526 1.073177 CCACGAAAAACGCGTATCCT 58.927 50.000 14.46 0.00 46.94 3.24
1597 5527 0.095762 CCCACGAAAAACGCGTATCC 59.904 55.000 14.46 1.02 46.94 2.59
1598 5528 0.095762 CCCCACGAAAAACGCGTATC 59.904 55.000 14.46 10.95 46.94 2.24
1599 5529 1.914531 GCCCCACGAAAAACGCGTAT 61.915 55.000 14.46 0.69 46.94 3.06
1600 5530 2.606030 GCCCCACGAAAAACGCGTA 61.606 57.895 14.46 0.00 46.94 4.42
1601 5531 3.956317 GCCCCACGAAAAACGCGT 61.956 61.111 5.58 5.58 46.94 6.01
1602 5532 3.471244 TTGCCCCACGAAAAACGCG 62.471 57.895 3.53 3.53 46.94 6.01
1603 5533 1.947146 GTTGCCCCACGAAAAACGC 60.947 57.895 0.00 0.00 46.94 4.84
1604 5534 1.655959 CGTTGCCCCACGAAAAACG 60.656 57.895 0.00 0.00 43.15 3.60
1605 5535 1.728672 TCGTTGCCCCACGAAAAAC 59.271 52.632 0.75 0.00 46.02 2.43
1606 5536 4.237445 TCGTTGCCCCACGAAAAA 57.763 50.000 0.75 0.00 46.02 1.94
1610 5540 2.342279 CTTCTCGTTGCCCCACGA 59.658 61.111 0.00 3.24 46.81 4.35
1611 5541 3.423154 GCTTCTCGTTGCCCCACG 61.423 66.667 0.00 0.00 41.78 4.94
1612 5542 2.032681 AGCTTCTCGTTGCCCCAC 59.967 61.111 0.00 0.00 0.00 4.61
1613 5543 2.347490 GAGCTTCTCGTTGCCCCA 59.653 61.111 0.00 0.00 0.00 4.96
1648 5578 1.629345 GGTACCGCCCGAGAAAAACG 61.629 60.000 0.00 0.00 0.00 3.60
1649 5579 2.165380 GGTACCGCCCGAGAAAAAC 58.835 57.895 0.00 0.00 0.00 2.43
1650 5580 4.699626 GGTACCGCCCGAGAAAAA 57.300 55.556 0.00 0.00 0.00 1.94
1663 5593 1.182667 GGGAGCATGGTTTTGGGTAC 58.817 55.000 0.00 0.00 0.00 3.34
1664 5594 1.080638 AGGGAGCATGGTTTTGGGTA 58.919 50.000 0.00 0.00 0.00 3.69
1665 5595 0.542702 CAGGGAGCATGGTTTTGGGT 60.543 55.000 0.00 0.00 0.00 4.51
1666 5596 1.259840 CCAGGGAGCATGGTTTTGGG 61.260 60.000 0.00 0.00 32.85 4.12
1667 5597 1.891722 GCCAGGGAGCATGGTTTTGG 61.892 60.000 15.06 15.06 40.17 3.28
1668 5598 1.593265 GCCAGGGAGCATGGTTTTG 59.407 57.895 0.00 0.00 40.17 2.44
1669 5599 1.610379 GGCCAGGGAGCATGGTTTT 60.610 57.895 0.00 0.00 40.17 2.43
1670 5600 2.037847 GGCCAGGGAGCATGGTTT 59.962 61.111 0.00 0.00 40.17 3.27
1671 5601 4.431131 CGGCCAGGGAGCATGGTT 62.431 66.667 2.24 0.00 40.17 3.67
1673 5603 4.864334 GTCGGCCAGGGAGCATGG 62.864 72.222 2.24 0.00 41.04 3.66
1674 5604 4.864334 GGTCGGCCAGGGAGCATG 62.864 72.222 0.00 0.00 34.09 4.06
1678 5608 4.787280 AGGAGGTCGGCCAGGGAG 62.787 72.222 9.71 0.00 37.19 4.30
1679 5609 4.779733 GAGGAGGTCGGCCAGGGA 62.780 72.222 9.71 0.00 37.19 4.20
1681 5611 4.787280 AGGAGGAGGTCGGCCAGG 62.787 72.222 9.71 0.00 37.19 4.45
1682 5612 3.151022 GAGGAGGAGGTCGGCCAG 61.151 72.222 9.71 0.00 37.19 4.85
1683 5613 4.779733 GGAGGAGGAGGTCGGCCA 62.780 72.222 9.71 0.00 37.19 5.36
1684 5614 4.467107 AGGAGGAGGAGGTCGGCC 62.467 72.222 0.00 0.00 0.00 6.13
1726 5656 1.602605 GGCGTTGTTGGTAGGGCTT 60.603 57.895 0.00 0.00 0.00 4.35
1895 5826 1.226547 CCTTCTCTGCTCGACGCTC 60.227 63.158 8.07 0.00 40.11 5.03
1925 5856 3.823330 GGAGACGGACGTGGCGAT 61.823 66.667 0.53 0.00 0.00 4.58
1944 5875 1.005340 CACGCTCTTGGAGAAGATGC 58.995 55.000 0.00 0.00 37.58 3.91
1962 5893 4.680237 CCACGAGGTTCAGGCGCA 62.680 66.667 10.83 0.00 0.00 6.09
2212 6153 0.888285 TCACACATGCGCCATCACAA 60.888 50.000 4.18 0.00 0.00 3.33
2227 6168 0.764271 TGCTCCTGAACACCATCACA 59.236 50.000 0.00 0.00 0.00 3.58
2229 6170 1.405933 CGATGCTCCTGAACACCATCA 60.406 52.381 0.00 0.00 33.65 3.07
2230 6171 1.293924 CGATGCTCCTGAACACCATC 58.706 55.000 0.00 0.00 0.00 3.51
2246 6187 0.321653 GAAACCCTGGTCTGCACGAT 60.322 55.000 0.00 0.00 0.00 3.73
2248 6189 0.606401 ATGAAACCCTGGTCTGCACG 60.606 55.000 0.00 0.00 0.00 5.34
2267 6208 0.804364 GGCGTCATGATGTTGAGCAA 59.196 50.000 16.18 0.00 0.00 3.91
2296 6237 5.231265 TGTACACATGAGTTCGTAGCTAG 57.769 43.478 0.00 0.00 0.00 3.42
2303 6244 6.943981 TCTTTTCTTTGTACACATGAGTTCG 58.056 36.000 0.00 0.00 0.00 3.95
2331 6274 4.169059 TGCACATGGCCTATCTAATTGT 57.831 40.909 3.32 0.00 43.89 2.71
2339 6282 4.535781 TCAGTAAAATGCACATGGCCTAT 58.464 39.130 3.32 0.00 43.89 2.57
2414 6363 4.523943 ACATTTGAGCTGTAGCAAAATCCA 59.476 37.500 6.65 0.00 45.16 3.41
2433 6382 7.004555 TGAGACACCTTGTACTATGAACATT 57.995 36.000 0.00 0.00 0.00 2.71
2445 6394 6.708054 CAGAATAAGAAACTGAGACACCTTGT 59.292 38.462 0.00 0.00 34.07 3.16
2446 6395 6.708054 ACAGAATAAGAAACTGAGACACCTTG 59.292 38.462 0.00 0.00 35.85 3.61
2447 6396 6.831976 ACAGAATAAGAAACTGAGACACCTT 58.168 36.000 0.00 0.00 35.85 3.50
2448 6397 6.426646 ACAGAATAAGAAACTGAGACACCT 57.573 37.500 0.00 0.00 35.85 4.00
2449 6398 8.779354 ATAACAGAATAAGAAACTGAGACACC 57.221 34.615 0.00 0.00 35.85 4.16
2469 6418 8.258007 ACTAGCTAACTGCATCTGTAAATAACA 58.742 33.333 0.00 0.00 45.94 2.41
2470 6419 8.543774 CACTAGCTAACTGCATCTGTAAATAAC 58.456 37.037 0.00 0.00 45.94 1.89
2471 6420 8.258007 ACACTAGCTAACTGCATCTGTAAATAA 58.742 33.333 0.00 0.00 45.94 1.40
2472 6421 7.706607 CACACTAGCTAACTGCATCTGTAAATA 59.293 37.037 0.00 0.00 45.94 1.40
2473 6422 6.536582 CACACTAGCTAACTGCATCTGTAAAT 59.463 38.462 0.00 0.00 45.94 1.40
2474 6423 5.869344 CACACTAGCTAACTGCATCTGTAAA 59.131 40.000 0.00 0.00 45.94 2.01
2475 6424 5.410924 CACACTAGCTAACTGCATCTGTAA 58.589 41.667 0.00 0.00 45.94 2.41
2476 6425 4.678044 GCACACTAGCTAACTGCATCTGTA 60.678 45.833 10.61 0.00 45.94 2.74
2477 6426 3.854666 CACACTAGCTAACTGCATCTGT 58.145 45.455 0.00 0.00 45.94 3.41
2478 6427 2.606725 GCACACTAGCTAACTGCATCTG 59.393 50.000 10.61 0.00 45.94 2.90
2479 6428 2.234661 TGCACACTAGCTAACTGCATCT 59.765 45.455 13.16 0.00 45.94 2.90
2480 6429 2.621338 TGCACACTAGCTAACTGCATC 58.379 47.619 13.16 0.00 45.94 3.91
2481 6430 2.768253 TGCACACTAGCTAACTGCAT 57.232 45.000 13.16 0.00 45.94 3.96
2482 6431 2.542020 TTGCACACTAGCTAACTGCA 57.458 45.000 13.16 13.16 45.94 4.41
2483 6432 2.413371 GCTTTGCACACTAGCTAACTGC 60.413 50.000 9.14 9.14 43.29 4.40
2484 6433 2.159787 CGCTTTGCACACTAGCTAACTG 60.160 50.000 0.00 0.00 34.99 3.16
2485 6434 2.069273 CGCTTTGCACACTAGCTAACT 58.931 47.619 0.00 0.00 34.99 2.24
2486 6435 1.128692 CCGCTTTGCACACTAGCTAAC 59.871 52.381 0.00 0.00 34.99 2.34
2487 6436 1.438651 CCGCTTTGCACACTAGCTAA 58.561 50.000 0.00 0.00 34.99 3.09
2488 6437 0.391130 CCCGCTTTGCACACTAGCTA 60.391 55.000 0.00 0.00 34.99 3.32
2489 6438 1.672356 CCCGCTTTGCACACTAGCT 60.672 57.895 0.00 0.00 34.99 3.32
2490 6439 1.639298 CTCCCGCTTTGCACACTAGC 61.639 60.000 0.00 0.00 0.00 3.42
2491 6440 0.320771 ACTCCCGCTTTGCACACTAG 60.321 55.000 0.00 0.00 0.00 2.57
2492 6441 0.602638 CACTCCCGCTTTGCACACTA 60.603 55.000 0.00 0.00 0.00 2.74
2493 6442 1.893808 CACTCCCGCTTTGCACACT 60.894 57.895 0.00 0.00 0.00 3.55
2494 6443 2.639286 CACTCCCGCTTTGCACAC 59.361 61.111 0.00 0.00 0.00 3.82
2495 6444 2.594303 CCACTCCCGCTTTGCACA 60.594 61.111 0.00 0.00 0.00 4.57
2496 6445 4.043200 GCCACTCCCGCTTTGCAC 62.043 66.667 0.00 0.00 0.00 4.57
2497 6446 2.889606 TAGCCACTCCCGCTTTGCA 61.890 57.895 0.00 0.00 37.79 4.08
2498 6447 2.046314 TAGCCACTCCCGCTTTGC 60.046 61.111 0.00 0.00 37.79 3.68
2499 6448 1.003839 TGTAGCCACTCCCGCTTTG 60.004 57.895 0.00 0.00 37.79 2.77
2500 6449 1.192146 TCTGTAGCCACTCCCGCTTT 61.192 55.000 0.00 0.00 37.79 3.51
2501 6450 0.978146 ATCTGTAGCCACTCCCGCTT 60.978 55.000 0.00 0.00 37.79 4.68
2502 6451 1.381872 ATCTGTAGCCACTCCCGCT 60.382 57.895 0.00 0.00 40.45 5.52
2503 6452 1.068250 GATCTGTAGCCACTCCCGC 59.932 63.158 0.00 0.00 0.00 6.13
2504 6453 0.824109 TTGATCTGTAGCCACTCCCG 59.176 55.000 0.00 0.00 0.00 5.14
2531 6480 2.833794 TCGACTGACCACTTTTTGAGG 58.166 47.619 0.00 0.00 0.00 3.86
2652 6604 7.396540 AAGAAAGAGCAGAAGAAAGAAACAA 57.603 32.000 0.00 0.00 0.00 2.83
2694 6646 2.990479 CTTAGCGGGTTCAGGCCT 59.010 61.111 0.00 0.00 0.00 5.19
2744 6698 1.223211 GAGGAGGCAAGGGAGAAGC 59.777 63.158 0.00 0.00 0.00 3.86
2788 6862 0.482446 TCTTTTCCCATGGTGGCAGT 59.518 50.000 11.73 0.00 35.79 4.40
2803 8290 5.252547 GGGAGATCTGAGCTTTCTTTCTTT 58.747 41.667 0.00 0.00 0.00 2.52
2873 8360 1.944177 TGAAGGAGAAGGTAGCTGCT 58.056 50.000 7.57 7.57 35.43 4.24
2892 8379 1.688197 CTGCTGTTGGTTTGGTGGATT 59.312 47.619 0.00 0.00 0.00 3.01
2992 8500 3.721087 TGATCCCCAGGTTTCTTTCTC 57.279 47.619 0.00 0.00 0.00 2.87
3072 8580 6.575244 ATTCAACCCTGTAATCCATGTAGA 57.425 37.500 0.00 0.00 0.00 2.59
3106 8621 5.381757 AGGTTGCAAGTTGTATGAAGGTAA 58.618 37.500 0.00 0.00 0.00 2.85
3108 8623 3.821033 GAGGTTGCAAGTTGTATGAAGGT 59.179 43.478 0.00 0.00 0.00 3.50
3109 8624 3.820467 TGAGGTTGCAAGTTGTATGAAGG 59.180 43.478 0.00 0.00 0.00 3.46
3110 8625 5.437289 TTGAGGTTGCAAGTTGTATGAAG 57.563 39.130 0.00 0.00 0.00 3.02
3111 8626 5.843673 TTTGAGGTTGCAAGTTGTATGAA 57.156 34.783 0.00 0.00 0.00 2.57
3112 8627 5.843673 TTTTGAGGTTGCAAGTTGTATGA 57.156 34.783 0.00 0.00 0.00 2.15
3113 8628 7.370383 AGTATTTTGAGGTTGCAAGTTGTATG 58.630 34.615 0.00 0.00 0.00 2.39
3114 8629 7.524717 AGTATTTTGAGGTTGCAAGTTGTAT 57.475 32.000 0.00 0.00 0.00 2.29
3115 8630 6.952773 AGTATTTTGAGGTTGCAAGTTGTA 57.047 33.333 0.00 0.00 0.00 2.41
3116 8631 5.852282 AGTATTTTGAGGTTGCAAGTTGT 57.148 34.783 0.00 0.00 0.00 3.32
3117 8632 7.041098 AGTCTAGTATTTTGAGGTTGCAAGTTG 60.041 37.037 0.00 0.00 0.00 3.16
3118 8633 6.998673 AGTCTAGTATTTTGAGGTTGCAAGTT 59.001 34.615 0.00 0.00 0.00 2.66
3178 8693 9.443283 GAGCATGCAAGTTTAGTATTTAGATTG 57.557 33.333 21.98 0.00 0.00 2.67
3245 8760 6.060028 TCAGTCTTGCTGTTGTAAAATGTC 57.940 37.500 0.00 0.00 45.23 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.