Multiple sequence alignment - TraesCS7A01G546700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G546700 chr7A 100.000 2912 0 0 1 2912 722127049 722129960 0.000000e+00 5378.0
1 TraesCS7A01G546700 chr7D 92.598 2148 116 27 722 2846 626598257 626596130 0.000000e+00 3046.0
2 TraesCS7A01G546700 chr7D 87.433 1313 122 21 643 1931 626455902 626457195 0.000000e+00 1471.0
3 TraesCS7A01G546700 chr7D 84.384 1364 165 30 672 2013 626438079 626439416 0.000000e+00 1295.0
4 TraesCS7A01G546700 chr7B 87.065 1724 135 40 880 2538 726754472 726756172 0.000000e+00 1868.0
5 TraesCS7A01G546700 chr7B 91.370 1321 61 23 722 2012 726887991 726886694 0.000000e+00 1759.0
6 TraesCS7A01G546700 chr7B 89.981 1028 63 7 993 2016 726492157 726493148 0.000000e+00 1291.0
7 TraesCS7A01G546700 chr7B 87.838 1036 103 9 993 2016 726267992 726266968 0.000000e+00 1194.0
8 TraesCS7A01G546700 chr7B 89.446 938 93 4 998 1931 726697075 726698010 0.000000e+00 1179.0
9 TraesCS7A01G546700 chr7B 85.110 1182 130 16 993 2159 726423548 726424698 0.000000e+00 1166.0
10 TraesCS7A01G546700 chr7B 88.832 197 13 4 643 838 726693485 726693673 1.740000e-57 233.0
11 TraesCS7A01G546700 chr7B 86.979 192 21 2 2291 2481 726923163 726922975 2.270000e-51 213.0
12 TraesCS7A01G546700 chr7B 88.785 107 8 4 680 785 726423223 726423326 8.470000e-26 128.0
13 TraesCS7A01G546700 chr7B 100.000 33 0 0 892 924 726748407 726748439 8.710000e-06 62.1
14 TraesCS7A01G546700 chr3A 87.129 101 12 1 2552 2651 670663180 670663080 2.370000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G546700 chr7A 722127049 722129960 2911 False 5378 5378 100.0000 1 2912 1 chr7A.!!$F1 2911
1 TraesCS7A01G546700 chr7D 626596130 626598257 2127 True 3046 3046 92.5980 722 2846 1 chr7D.!!$R1 2124
2 TraesCS7A01G546700 chr7D 626455902 626457195 1293 False 1471 1471 87.4330 643 1931 1 chr7D.!!$F2 1288
3 TraesCS7A01G546700 chr7D 626438079 626439416 1337 False 1295 1295 84.3840 672 2013 1 chr7D.!!$F1 1341
4 TraesCS7A01G546700 chr7B 726754472 726756172 1700 False 1868 1868 87.0650 880 2538 1 chr7B.!!$F3 1658
5 TraesCS7A01G546700 chr7B 726886694 726887991 1297 True 1759 1759 91.3700 722 2012 1 chr7B.!!$R2 1290
6 TraesCS7A01G546700 chr7B 726492157 726493148 991 False 1291 1291 89.9810 993 2016 1 chr7B.!!$F1 1023
7 TraesCS7A01G546700 chr7B 726266968 726267992 1024 True 1194 1194 87.8380 993 2016 1 chr7B.!!$R1 1023
8 TraesCS7A01G546700 chr7B 726693485 726698010 4525 False 706 1179 89.1390 643 1931 2 chr7B.!!$F5 1288
9 TraesCS7A01G546700 chr7B 726423223 726424698 1475 False 647 1166 86.9475 680 2159 2 chr7B.!!$F4 1479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 285 0.030235 AAGAAAAACAAGACCGGCGC 59.97 50.0 0.0 0.0 0.0 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2207 5553 2.009774 CCTGTTATGGACTCAAAGGCG 58.99 52.381 0.0 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 9.606631 ATTGCCTATTGTCTAAAAACAAAAACA 57.393 25.926 0.00 0.00 42.10 2.83
71 72 8.413899 TGCCTATTGTCTAAAAACAAAAACAC 57.586 30.769 0.00 0.00 42.10 3.32
72 73 7.492994 TGCCTATTGTCTAAAAACAAAAACACC 59.507 33.333 0.00 0.00 42.10 4.16
73 74 7.709182 GCCTATTGTCTAAAAACAAAAACACCT 59.291 33.333 0.00 0.00 42.10 4.00
74 75 9.244799 CCTATTGTCTAAAAACAAAAACACCTC 57.755 33.333 0.00 0.00 42.10 3.85
75 76 9.796120 CTATTGTCTAAAAACAAAAACACCTCA 57.204 29.630 0.00 0.00 42.10 3.86
77 78 8.527567 TTGTCTAAAAACAAAAACACCTCAAG 57.472 30.769 0.00 0.00 36.25 3.02
78 79 7.887381 TGTCTAAAAACAAAAACACCTCAAGA 58.113 30.769 0.00 0.00 0.00 3.02
79 80 8.361139 TGTCTAAAAACAAAAACACCTCAAGAA 58.639 29.630 0.00 0.00 0.00 2.52
80 81 9.198837 GTCTAAAAACAAAAACACCTCAAGAAA 57.801 29.630 0.00 0.00 0.00 2.52
81 82 9.418045 TCTAAAAACAAAAACACCTCAAGAAAG 57.582 29.630 0.00 0.00 0.00 2.62
82 83 6.480524 AAAACAAAAACACCTCAAGAAAGC 57.519 33.333 0.00 0.00 0.00 3.51
83 84 4.799564 ACAAAAACACCTCAAGAAAGCA 57.200 36.364 0.00 0.00 0.00 3.91
84 85 5.146010 ACAAAAACACCTCAAGAAAGCAA 57.854 34.783 0.00 0.00 0.00 3.91
85 86 5.546526 ACAAAAACACCTCAAGAAAGCAAA 58.453 33.333 0.00 0.00 0.00 3.68
86 87 5.639082 ACAAAAACACCTCAAGAAAGCAAAG 59.361 36.000 0.00 0.00 0.00 2.77
87 88 5.659440 AAAACACCTCAAGAAAGCAAAGA 57.341 34.783 0.00 0.00 0.00 2.52
88 89 5.659440 AAACACCTCAAGAAAGCAAAGAA 57.341 34.783 0.00 0.00 0.00 2.52
89 90 5.659440 AACACCTCAAGAAAGCAAAGAAA 57.341 34.783 0.00 0.00 0.00 2.52
90 91 5.659440 ACACCTCAAGAAAGCAAAGAAAA 57.341 34.783 0.00 0.00 0.00 2.29
91 92 6.036577 ACACCTCAAGAAAGCAAAGAAAAA 57.963 33.333 0.00 0.00 0.00 1.94
92 93 6.101997 ACACCTCAAGAAAGCAAAGAAAAAG 58.898 36.000 0.00 0.00 0.00 2.27
93 94 6.071391 ACACCTCAAGAAAGCAAAGAAAAAGA 60.071 34.615 0.00 0.00 0.00 2.52
94 95 6.474751 CACCTCAAGAAAGCAAAGAAAAAGAG 59.525 38.462 0.00 0.00 0.00 2.85
95 96 5.461407 CCTCAAGAAAGCAAAGAAAAAGAGC 59.539 40.000 0.00 0.00 0.00 4.09
96 97 6.212888 TCAAGAAAGCAAAGAAAAAGAGCT 57.787 33.333 0.00 0.00 37.08 4.09
97 98 7.333528 TCAAGAAAGCAAAGAAAAAGAGCTA 57.666 32.000 0.00 0.00 34.66 3.32
98 99 7.771183 TCAAGAAAGCAAAGAAAAAGAGCTAA 58.229 30.769 0.00 0.00 34.66 3.09
99 100 7.917505 TCAAGAAAGCAAAGAAAAAGAGCTAAG 59.082 33.333 0.00 0.00 34.66 2.18
100 101 7.573968 AGAAAGCAAAGAAAAAGAGCTAAGA 57.426 32.000 0.00 0.00 34.66 2.10
101 102 8.000780 AGAAAGCAAAGAAAAAGAGCTAAGAA 57.999 30.769 0.00 0.00 34.66 2.52
102 103 8.470002 AGAAAGCAAAGAAAAAGAGCTAAGAAA 58.530 29.630 0.00 0.00 34.66 2.52
103 104 9.087424 GAAAGCAAAGAAAAAGAGCTAAGAAAA 57.913 29.630 0.00 0.00 34.66 2.29
104 105 9.435688 AAAGCAAAGAAAAAGAGCTAAGAAAAA 57.564 25.926 0.00 0.00 34.66 1.94
164 165 9.671279 AAGAAAAAGAAACCAATGAAAATGAGT 57.329 25.926 0.00 0.00 0.00 3.41
165 166 9.101655 AGAAAAAGAAACCAATGAAAATGAGTG 57.898 29.630 0.00 0.00 0.00 3.51
166 167 9.097257 GAAAAAGAAACCAATGAAAATGAGTGA 57.903 29.630 0.00 0.00 0.00 3.41
167 168 9.447157 AAAAAGAAACCAATGAAAATGAGTGAA 57.553 25.926 0.00 0.00 0.00 3.18
168 169 9.447157 AAAAGAAACCAATGAAAATGAGTGAAA 57.553 25.926 0.00 0.00 0.00 2.69
169 170 9.447157 AAAGAAACCAATGAAAATGAGTGAAAA 57.553 25.926 0.00 0.00 0.00 2.29
170 171 8.424274 AGAAACCAATGAAAATGAGTGAAAAC 57.576 30.769 0.00 0.00 0.00 2.43
171 172 8.040132 AGAAACCAATGAAAATGAGTGAAAACA 58.960 29.630 0.00 0.00 0.00 2.83
172 173 8.558973 AAACCAATGAAAATGAGTGAAAACAA 57.441 26.923 0.00 0.00 0.00 2.83
173 174 8.558973 AACCAATGAAAATGAGTGAAAACAAA 57.441 26.923 0.00 0.00 0.00 2.83
174 175 8.200364 ACCAATGAAAATGAGTGAAAACAAAG 57.800 30.769 0.00 0.00 0.00 2.77
175 176 7.823799 ACCAATGAAAATGAGTGAAAACAAAGT 59.176 29.630 0.00 0.00 0.00 2.66
176 177 9.311916 CCAATGAAAATGAGTGAAAACAAAGTA 57.688 29.630 0.00 0.00 0.00 2.24
197 198 9.587772 AAAGTAAAAGAAAGAAGAAGAAAAGCC 57.412 29.630 0.00 0.00 0.00 4.35
198 199 7.418408 AGTAAAAGAAAGAAGAAGAAAAGCCG 58.582 34.615 0.00 0.00 0.00 5.52
199 200 6.451064 AAAAGAAAGAAGAAGAAAAGCCGA 57.549 33.333 0.00 0.00 0.00 5.54
200 201 6.641169 AAAGAAAGAAGAAGAAAAGCCGAT 57.359 33.333 0.00 0.00 0.00 4.18
201 202 7.745620 AAAGAAAGAAGAAGAAAAGCCGATA 57.254 32.000 0.00 0.00 0.00 2.92
202 203 7.745620 AAGAAAGAAGAAGAAAAGCCGATAA 57.254 32.000 0.00 0.00 0.00 1.75
203 204 7.745620 AGAAAGAAGAAGAAAAGCCGATAAA 57.254 32.000 0.00 0.00 0.00 1.40
204 205 8.166422 AGAAAGAAGAAGAAAAGCCGATAAAA 57.834 30.769 0.00 0.00 0.00 1.52
205 206 8.630037 AGAAAGAAGAAGAAAAGCCGATAAAAA 58.370 29.630 0.00 0.00 0.00 1.94
206 207 8.575565 AAAGAAGAAGAAAAGCCGATAAAAAC 57.424 30.769 0.00 0.00 0.00 2.43
207 208 7.272037 AGAAGAAGAAAAGCCGATAAAAACA 57.728 32.000 0.00 0.00 0.00 2.83
208 209 7.712797 AGAAGAAGAAAAGCCGATAAAAACAA 58.287 30.769 0.00 0.00 0.00 2.83
209 210 8.360390 AGAAGAAGAAAAGCCGATAAAAACAAT 58.640 29.630 0.00 0.00 0.00 2.71
210 211 9.620660 GAAGAAGAAAAGCCGATAAAAACAATA 57.379 29.630 0.00 0.00 0.00 1.90
211 212 9.974980 AAGAAGAAAAGCCGATAAAAACAATAA 57.025 25.926 0.00 0.00 0.00 1.40
212 213 9.974980 AGAAGAAAAGCCGATAAAAACAATAAA 57.025 25.926 0.00 0.00 0.00 1.40
234 235 6.862711 AAAAACCGGTGAAAAACAAAAGAA 57.137 29.167 8.52 0.00 0.00 2.52
235 236 6.862711 AAAACCGGTGAAAAACAAAAGAAA 57.137 29.167 8.52 0.00 0.00 2.52
236 237 6.474819 AAACCGGTGAAAAACAAAAGAAAG 57.525 33.333 8.52 0.00 0.00 2.62
237 238 3.930229 ACCGGTGAAAAACAAAAGAAAGC 59.070 39.130 6.12 0.00 0.00 3.51
238 239 3.929610 CCGGTGAAAAACAAAAGAAAGCA 59.070 39.130 0.00 0.00 0.00 3.91
239 240 4.390297 CCGGTGAAAAACAAAAGAAAGCAA 59.610 37.500 0.00 0.00 0.00 3.91
240 241 5.445806 CCGGTGAAAAACAAAAGAAAGCAAG 60.446 40.000 0.00 0.00 0.00 4.01
241 242 5.120053 CGGTGAAAAACAAAAGAAAGCAAGT 59.880 36.000 0.00 0.00 0.00 3.16
242 243 6.309251 CGGTGAAAAACAAAAGAAAGCAAGTA 59.691 34.615 0.00 0.00 0.00 2.24
243 244 7.148722 CGGTGAAAAACAAAAGAAAGCAAGTAA 60.149 33.333 0.00 0.00 0.00 2.24
244 245 8.499967 GGTGAAAAACAAAAGAAAGCAAGTAAA 58.500 29.630 0.00 0.00 0.00 2.01
245 246 9.871299 GTGAAAAACAAAAGAAAGCAAGTAAAA 57.129 25.926 0.00 0.00 0.00 1.52
252 253 9.877137 ACAAAAGAAAGCAAGTAAAAACAAAAG 57.123 25.926 0.00 0.00 0.00 2.27
280 281 6.474819 AAAAACCAAAGAAAAACAAGACCG 57.525 33.333 0.00 0.00 0.00 4.79
281 282 3.793797 ACCAAAGAAAAACAAGACCGG 57.206 42.857 0.00 0.00 0.00 5.28
282 283 2.159156 ACCAAAGAAAAACAAGACCGGC 60.159 45.455 0.00 0.00 0.00 6.13
283 284 2.116366 CAAAGAAAAACAAGACCGGCG 58.884 47.619 0.00 0.00 0.00 6.46
284 285 0.030235 AAGAAAAACAAGACCGGCGC 59.970 50.000 0.00 0.00 0.00 6.53
285 286 1.724581 GAAAAACAAGACCGGCGCG 60.725 57.895 0.00 0.00 0.00 6.86
286 287 2.108344 GAAAAACAAGACCGGCGCGA 62.108 55.000 12.10 0.00 0.00 5.87
287 288 2.113131 AAAAACAAGACCGGCGCGAG 62.113 55.000 12.10 1.76 0.00 5.03
299 300 3.070060 CGCGAGCGAACCTACAAC 58.930 61.111 12.58 0.00 42.83 3.32
300 301 1.443872 CGCGAGCGAACCTACAACT 60.444 57.895 12.58 0.00 42.83 3.16
301 302 0.179181 CGCGAGCGAACCTACAACTA 60.179 55.000 12.58 0.00 42.83 2.24
302 303 1.266466 GCGAGCGAACCTACAACTAC 58.734 55.000 0.00 0.00 0.00 2.73
303 304 1.401931 GCGAGCGAACCTACAACTACA 60.402 52.381 0.00 0.00 0.00 2.74
304 305 2.248487 CGAGCGAACCTACAACTACAC 58.752 52.381 0.00 0.00 0.00 2.90
305 306 2.351060 CGAGCGAACCTACAACTACACA 60.351 50.000 0.00 0.00 0.00 3.72
306 307 3.243336 GAGCGAACCTACAACTACACAG 58.757 50.000 0.00 0.00 0.00 3.66
307 308 2.889045 AGCGAACCTACAACTACACAGA 59.111 45.455 0.00 0.00 0.00 3.41
308 309 3.319972 AGCGAACCTACAACTACACAGAA 59.680 43.478 0.00 0.00 0.00 3.02
309 310 3.673809 GCGAACCTACAACTACACAGAAG 59.326 47.826 0.00 0.00 0.00 2.85
310 311 4.795308 GCGAACCTACAACTACACAGAAGT 60.795 45.833 0.00 0.00 0.00 3.01
321 322 1.608055 CACAGAAGTGTTGCATGGGA 58.392 50.000 0.00 0.00 40.92 4.37
322 323 1.267806 CACAGAAGTGTTGCATGGGAC 59.732 52.381 0.00 0.00 40.92 4.46
323 324 1.143684 ACAGAAGTGTTGCATGGGACT 59.856 47.619 0.00 0.00 30.30 3.85
324 325 1.538512 CAGAAGTGTTGCATGGGACTG 59.461 52.381 0.00 0.00 0.00 3.51
325 326 0.242017 GAAGTGTTGCATGGGACTGC 59.758 55.000 0.00 0.00 42.62 4.40
326 327 1.518056 AAGTGTTGCATGGGACTGCG 61.518 55.000 0.00 0.00 45.30 5.18
327 328 3.364441 TGTTGCATGGGACTGCGC 61.364 61.111 0.00 0.00 45.30 6.09
328 329 3.058160 GTTGCATGGGACTGCGCT 61.058 61.111 9.73 0.00 45.30 5.92
329 330 1.745115 GTTGCATGGGACTGCGCTA 60.745 57.895 9.73 0.00 45.30 4.26
330 331 1.745115 TTGCATGGGACTGCGCTAC 60.745 57.895 9.73 0.00 45.30 3.58
331 332 2.184020 TTGCATGGGACTGCGCTACT 62.184 55.000 9.73 0.00 45.30 2.57
332 333 1.450312 GCATGGGACTGCGCTACTT 60.450 57.895 9.73 0.00 31.49 2.24
333 334 1.709147 GCATGGGACTGCGCTACTTG 61.709 60.000 9.73 4.17 31.49 3.16
334 335 1.450312 ATGGGACTGCGCTACTTGC 60.450 57.895 9.73 0.00 38.57 4.01
335 336 2.820037 GGGACTGCGCTACTTGCC 60.820 66.667 9.73 0.45 38.78 4.52
336 337 2.820037 GGACTGCGCTACTTGCCC 60.820 66.667 9.73 0.00 38.78 5.36
337 338 2.047274 GACTGCGCTACTTGCCCA 60.047 61.111 9.73 0.00 38.78 5.36
339 340 3.503363 CTGCGCTACTTGCCCAGC 61.503 66.667 9.73 0.00 40.18 4.85
340 341 3.965539 CTGCGCTACTTGCCCAGCT 62.966 63.158 9.73 0.00 40.18 4.24
341 342 2.747855 GCGCTACTTGCCCAGCTT 60.748 61.111 0.00 0.00 38.78 3.74
342 343 3.044059 GCGCTACTTGCCCAGCTTG 62.044 63.158 0.00 0.00 38.78 4.01
343 344 1.375908 CGCTACTTGCCCAGCTTGA 60.376 57.895 0.00 0.00 38.78 3.02
344 345 0.745845 CGCTACTTGCCCAGCTTGAT 60.746 55.000 0.00 0.00 38.78 2.57
345 346 1.467920 GCTACTTGCCCAGCTTGATT 58.532 50.000 0.00 0.00 34.86 2.57
346 347 1.821136 GCTACTTGCCCAGCTTGATTT 59.179 47.619 0.00 0.00 34.86 2.17
347 348 2.416431 GCTACTTGCCCAGCTTGATTTG 60.416 50.000 0.00 0.00 34.86 2.32
348 349 0.319405 ACTTGCCCAGCTTGATTTGC 59.681 50.000 0.00 0.00 0.00 3.68
349 350 0.606604 CTTGCCCAGCTTGATTTGCT 59.393 50.000 0.00 0.00 42.06 3.91
350 351 1.001633 CTTGCCCAGCTTGATTTGCTT 59.998 47.619 0.00 0.00 38.92 3.91
351 352 0.319083 TGCCCAGCTTGATTTGCTTG 59.681 50.000 0.00 0.00 38.92 4.01
352 353 1.017701 GCCCAGCTTGATTTGCTTGC 61.018 55.000 0.00 0.00 38.92 4.01
353 354 0.390735 CCCAGCTTGATTTGCTTGCC 60.391 55.000 0.00 0.00 38.92 4.52
354 355 0.606604 CCAGCTTGATTTGCTTGCCT 59.393 50.000 0.00 0.00 38.92 4.75
355 356 1.671850 CCAGCTTGATTTGCTTGCCTG 60.672 52.381 0.00 0.00 38.92 4.85
356 357 1.000506 CAGCTTGATTTGCTTGCCTGT 59.999 47.619 0.00 0.00 38.92 4.00
357 358 2.229543 CAGCTTGATTTGCTTGCCTGTA 59.770 45.455 0.00 0.00 38.92 2.74
358 359 2.892852 AGCTTGATTTGCTTGCCTGTAA 59.107 40.909 0.00 0.00 37.52 2.41
359 360 3.321682 AGCTTGATTTGCTTGCCTGTAAA 59.678 39.130 0.00 0.00 37.52 2.01
360 361 4.057432 GCTTGATTTGCTTGCCTGTAAAA 58.943 39.130 0.00 0.00 0.00 1.52
361 362 4.511082 GCTTGATTTGCTTGCCTGTAAAAA 59.489 37.500 0.00 0.00 0.00 1.94
383 384 5.880054 AAAAGGTGATTCGTAATGTCCAG 57.120 39.130 0.00 0.00 0.00 3.86
384 385 4.553330 AAGGTGATTCGTAATGTCCAGT 57.447 40.909 0.00 0.00 0.00 4.00
385 386 4.124851 AGGTGATTCGTAATGTCCAGTC 57.875 45.455 0.00 0.00 0.00 3.51
386 387 3.513912 AGGTGATTCGTAATGTCCAGTCA 59.486 43.478 0.00 0.00 0.00 3.41
387 388 4.020573 AGGTGATTCGTAATGTCCAGTCAA 60.021 41.667 0.00 0.00 0.00 3.18
388 389 4.092968 GGTGATTCGTAATGTCCAGTCAAC 59.907 45.833 0.00 0.00 0.00 3.18
389 390 4.092968 GTGATTCGTAATGTCCAGTCAACC 59.907 45.833 0.00 0.00 0.00 3.77
390 391 3.755112 TTCGTAATGTCCAGTCAACCA 57.245 42.857 0.00 0.00 0.00 3.67
391 392 3.313012 TCGTAATGTCCAGTCAACCAG 57.687 47.619 0.00 0.00 0.00 4.00
392 393 1.732259 CGTAATGTCCAGTCAACCAGC 59.268 52.381 0.00 0.00 0.00 4.85
393 394 2.084546 GTAATGTCCAGTCAACCAGCC 58.915 52.381 0.00 0.00 0.00 4.85
394 395 0.478072 AATGTCCAGTCAACCAGCCA 59.522 50.000 0.00 0.00 0.00 4.75
395 396 0.478072 ATGTCCAGTCAACCAGCCAA 59.522 50.000 0.00 0.00 0.00 4.52
396 397 0.465460 TGTCCAGTCAACCAGCCAAC 60.465 55.000 0.00 0.00 0.00 3.77
397 398 0.465460 GTCCAGTCAACCAGCCAACA 60.465 55.000 0.00 0.00 0.00 3.33
398 399 0.478072 TCCAGTCAACCAGCCAACAT 59.522 50.000 0.00 0.00 0.00 2.71
399 400 1.702401 TCCAGTCAACCAGCCAACATA 59.298 47.619 0.00 0.00 0.00 2.29
400 401 2.107378 TCCAGTCAACCAGCCAACATAA 59.893 45.455 0.00 0.00 0.00 1.90
401 402 2.228822 CCAGTCAACCAGCCAACATAAC 59.771 50.000 0.00 0.00 0.00 1.89
402 403 3.149196 CAGTCAACCAGCCAACATAACT 58.851 45.455 0.00 0.00 0.00 2.24
403 404 3.058016 CAGTCAACCAGCCAACATAACTG 60.058 47.826 0.00 0.00 0.00 3.16
406 407 2.886382 CCAGCCAACATAACTGGGG 58.114 57.895 0.19 0.00 45.97 4.96
407 408 0.039618 CCAGCCAACATAACTGGGGT 59.960 55.000 0.19 0.00 45.97 4.95
408 409 1.549950 CCAGCCAACATAACTGGGGTT 60.550 52.381 0.19 0.00 45.97 4.11
409 410 2.247358 CAGCCAACATAACTGGGGTTT 58.753 47.619 0.00 0.00 36.92 3.27
410 411 2.029110 CAGCCAACATAACTGGGGTTTG 60.029 50.000 0.00 0.00 36.92 2.93
411 412 2.158385 AGCCAACATAACTGGGGTTTGA 60.158 45.455 0.00 0.00 36.92 2.69
412 413 2.029380 GCCAACATAACTGGGGTTTGAC 60.029 50.000 0.00 0.00 36.92 3.18
413 414 3.496331 CCAACATAACTGGGGTTTGACT 58.504 45.455 0.00 0.00 36.92 3.41
414 415 3.506067 CCAACATAACTGGGGTTTGACTC 59.494 47.826 0.00 0.00 36.92 3.36
415 416 4.141287 CAACATAACTGGGGTTTGACTCA 58.859 43.478 0.00 0.00 36.92 3.41
416 417 4.021102 ACATAACTGGGGTTTGACTCAG 57.979 45.455 0.00 0.00 36.92 3.35
417 418 2.561478 TAACTGGGGTTTGACTCAGC 57.439 50.000 0.00 0.00 36.92 4.26
418 419 0.178990 AACTGGGGTTTGACTCAGCC 60.179 55.000 0.00 0.00 30.55 4.85
419 420 1.352622 ACTGGGGTTTGACTCAGCCA 61.353 55.000 0.00 0.00 33.04 4.75
420 421 0.890996 CTGGGGTTTGACTCAGCCAC 60.891 60.000 4.68 1.82 33.04 5.01
421 422 1.352622 TGGGGTTTGACTCAGCCACT 61.353 55.000 5.80 0.00 33.04 4.00
422 423 0.178990 GGGGTTTGACTCAGCCACTT 60.179 55.000 4.68 0.00 33.04 3.16
423 424 1.239347 GGGTTTGACTCAGCCACTTC 58.761 55.000 4.68 0.00 0.00 3.01
424 425 1.476833 GGGTTTGACTCAGCCACTTCA 60.477 52.381 4.68 0.00 0.00 3.02
425 426 1.876156 GGTTTGACTCAGCCACTTCAG 59.124 52.381 0.00 0.00 0.00 3.02
426 427 1.265365 GTTTGACTCAGCCACTTCAGC 59.735 52.381 0.00 0.00 0.00 4.26
427 428 0.601046 TTGACTCAGCCACTTCAGCG 60.601 55.000 0.00 0.00 34.64 5.18
428 429 1.290324 GACTCAGCCACTTCAGCGA 59.710 57.895 0.00 0.00 34.64 4.93
429 430 0.319900 GACTCAGCCACTTCAGCGAA 60.320 55.000 0.00 0.00 34.64 4.70
430 431 0.322975 ACTCAGCCACTTCAGCGAAT 59.677 50.000 0.00 0.00 34.64 3.34
431 432 1.550524 ACTCAGCCACTTCAGCGAATA 59.449 47.619 0.00 0.00 34.64 1.75
432 433 1.929836 CTCAGCCACTTCAGCGAATAC 59.070 52.381 0.00 0.00 34.64 1.89
433 434 1.009829 CAGCCACTTCAGCGAATACC 58.990 55.000 0.00 0.00 34.64 2.73
434 435 0.613260 AGCCACTTCAGCGAATACCA 59.387 50.000 0.00 0.00 34.64 3.25
435 436 1.003118 AGCCACTTCAGCGAATACCAA 59.997 47.619 0.00 0.00 34.64 3.67
436 437 1.810151 GCCACTTCAGCGAATACCAAA 59.190 47.619 0.00 0.00 0.00 3.28
437 438 2.227865 GCCACTTCAGCGAATACCAAAA 59.772 45.455 0.00 0.00 0.00 2.44
438 439 3.305064 GCCACTTCAGCGAATACCAAAAA 60.305 43.478 0.00 0.00 0.00 1.94
463 464 9.447040 AAAACGCTCTAAAAGTTCAAAATAGAC 57.553 29.630 0.00 0.00 0.00 2.59
464 465 7.130303 ACGCTCTAAAAGTTCAAAATAGACC 57.870 36.000 0.00 0.00 0.00 3.85
465 466 6.128634 ACGCTCTAAAAGTTCAAAATAGACCG 60.129 38.462 0.00 0.00 31.42 4.79
466 467 6.543736 GCTCTAAAAGTTCAAAATAGACCGG 58.456 40.000 0.00 0.00 0.00 5.28
467 468 6.370718 GCTCTAAAAGTTCAAAATAGACCGGA 59.629 38.462 9.46 0.00 0.00 5.14
468 469 7.094933 GCTCTAAAAGTTCAAAATAGACCGGAA 60.095 37.037 9.46 0.00 0.00 4.30
469 470 8.857694 TCTAAAAGTTCAAAATAGACCGGAAT 57.142 30.769 9.46 0.00 0.00 3.01
470 471 8.943002 TCTAAAAGTTCAAAATAGACCGGAATC 58.057 33.333 9.46 0.00 0.00 2.52
471 472 7.519032 AAAAGTTCAAAATAGACCGGAATCA 57.481 32.000 9.46 0.00 0.00 2.57
472 473 6.743575 AAGTTCAAAATAGACCGGAATCAG 57.256 37.500 9.46 0.00 0.00 2.90
473 474 6.049955 AGTTCAAAATAGACCGGAATCAGA 57.950 37.500 9.46 0.00 0.00 3.27
474 475 6.109359 AGTTCAAAATAGACCGGAATCAGAG 58.891 40.000 9.46 0.00 0.00 3.35
475 476 5.932619 TCAAAATAGACCGGAATCAGAGA 57.067 39.130 9.46 0.00 0.00 3.10
476 477 6.485830 TCAAAATAGACCGGAATCAGAGAT 57.514 37.500 9.46 0.00 0.00 2.75
477 478 6.889198 TCAAAATAGACCGGAATCAGAGATT 58.111 36.000 9.46 0.00 0.00 2.40
478 479 7.338710 TCAAAATAGACCGGAATCAGAGATTT 58.661 34.615 9.46 0.00 0.00 2.17
479 480 7.829211 TCAAAATAGACCGGAATCAGAGATTTT 59.171 33.333 9.46 5.70 0.00 1.82
480 481 8.462016 CAAAATAGACCGGAATCAGAGATTTTT 58.538 33.333 9.46 0.00 0.00 1.94
481 482 7.559590 AATAGACCGGAATCAGAGATTTTTG 57.440 36.000 9.46 0.00 0.00 2.44
482 483 4.911390 AGACCGGAATCAGAGATTTTTGT 58.089 39.130 9.46 0.00 0.00 2.83
483 484 6.049955 AGACCGGAATCAGAGATTTTTGTA 57.950 37.500 9.46 0.00 0.00 2.41
484 485 6.653989 AGACCGGAATCAGAGATTTTTGTAT 58.346 36.000 9.46 0.00 0.00 2.29
485 486 6.540189 AGACCGGAATCAGAGATTTTTGTATG 59.460 38.462 9.46 0.00 0.00 2.39
486 487 5.066505 ACCGGAATCAGAGATTTTTGTATGC 59.933 40.000 9.46 0.00 0.00 3.14
487 488 5.506317 CCGGAATCAGAGATTTTTGTATGCC 60.506 44.000 0.00 0.00 0.00 4.40
488 489 5.514279 GGAATCAGAGATTTTTGTATGCCG 58.486 41.667 0.00 0.00 0.00 5.69
489 490 5.296780 GGAATCAGAGATTTTTGTATGCCGA 59.703 40.000 0.00 0.00 0.00 5.54
490 491 6.016777 GGAATCAGAGATTTTTGTATGCCGAT 60.017 38.462 0.00 0.00 0.00 4.18
491 492 6.949352 ATCAGAGATTTTTGTATGCCGATT 57.051 33.333 0.00 0.00 0.00 3.34
492 493 6.757897 TCAGAGATTTTTGTATGCCGATTT 57.242 33.333 0.00 0.00 0.00 2.17
493 494 7.857734 TCAGAGATTTTTGTATGCCGATTTA 57.142 32.000 0.00 0.00 0.00 1.40
494 495 7.919690 TCAGAGATTTTTGTATGCCGATTTAG 58.080 34.615 0.00 0.00 0.00 1.85
495 496 7.012327 TCAGAGATTTTTGTATGCCGATTTAGG 59.988 37.037 0.00 0.00 0.00 2.69
496 497 6.263168 AGAGATTTTTGTATGCCGATTTAGGG 59.737 38.462 0.00 0.00 0.00 3.53
497 498 6.126409 AGATTTTTGTATGCCGATTTAGGGA 58.874 36.000 0.00 0.00 35.63 4.20
498 499 6.777580 AGATTTTTGTATGCCGATTTAGGGAT 59.222 34.615 0.00 0.00 44.72 3.85
499 500 6.783708 TTTTTGTATGCCGATTTAGGGATT 57.216 33.333 0.00 0.00 39.41 3.01
500 501 7.883391 TTTTTGTATGCCGATTTAGGGATTA 57.117 32.000 0.00 0.00 39.41 1.75
501 502 7.504924 TTTTGTATGCCGATTTAGGGATTAG 57.495 36.000 0.00 0.00 39.41 1.73
502 503 5.818678 TGTATGCCGATTTAGGGATTAGT 57.181 39.130 0.00 0.00 39.41 2.24
503 504 6.921486 TGTATGCCGATTTAGGGATTAGTA 57.079 37.500 0.00 0.00 39.41 1.82
504 505 6.931838 TGTATGCCGATTTAGGGATTAGTAG 58.068 40.000 0.00 0.00 39.41 2.57
505 506 6.495872 TGTATGCCGATTTAGGGATTAGTAGT 59.504 38.462 0.00 0.00 39.41 2.73
506 507 7.670979 TGTATGCCGATTTAGGGATTAGTAGTA 59.329 37.037 0.00 0.00 39.41 1.82
507 508 7.735326 ATGCCGATTTAGGGATTAGTAGTAT 57.265 36.000 0.00 0.00 39.41 2.12
508 509 8.834004 ATGCCGATTTAGGGATTAGTAGTATA 57.166 34.615 0.00 0.00 39.41 1.47
509 510 8.289939 TGCCGATTTAGGGATTAGTAGTATAG 57.710 38.462 0.00 0.00 0.00 1.31
510 511 8.111545 TGCCGATTTAGGGATTAGTAGTATAGA 58.888 37.037 0.00 0.00 0.00 1.98
511 512 8.964772 GCCGATTTAGGGATTAGTAGTATAGAA 58.035 37.037 0.00 0.00 0.00 2.10
529 530 9.359653 AGTATAGAATTCATTTAGCATTTGCCT 57.640 29.630 8.44 0.00 43.38 4.75
532 533 7.408756 AGAATTCATTTAGCATTTGCCTACA 57.591 32.000 8.44 0.00 43.38 2.74
533 534 7.839907 AGAATTCATTTAGCATTTGCCTACAA 58.160 30.769 8.44 0.00 43.38 2.41
534 535 7.977853 AGAATTCATTTAGCATTTGCCTACAAG 59.022 33.333 8.44 0.00 43.38 3.16
535 536 6.588719 TTCATTTAGCATTTGCCTACAAGT 57.411 33.333 0.00 0.00 43.38 3.16
536 537 6.588719 TCATTTAGCATTTGCCTACAAGTT 57.411 33.333 0.00 0.00 43.38 2.66
537 538 6.991938 TCATTTAGCATTTGCCTACAAGTTT 58.008 32.000 0.00 0.00 43.38 2.66
538 539 8.116651 TCATTTAGCATTTGCCTACAAGTTTA 57.883 30.769 0.00 0.00 43.38 2.01
539 540 8.580720 TCATTTAGCATTTGCCTACAAGTTTAA 58.419 29.630 0.00 0.00 43.38 1.52
540 541 8.863049 CATTTAGCATTTGCCTACAAGTTTAAG 58.137 33.333 0.00 0.00 43.38 1.85
541 542 5.391312 AGCATTTGCCTACAAGTTTAAGG 57.609 39.130 0.00 0.00 43.38 2.69
542 543 4.832823 AGCATTTGCCTACAAGTTTAAGGT 59.167 37.500 0.00 0.00 43.38 3.50
543 544 5.304357 AGCATTTGCCTACAAGTTTAAGGTT 59.696 36.000 0.00 0.00 43.38 3.50
544 545 5.989168 GCATTTGCCTACAAGTTTAAGGTTT 59.011 36.000 2.90 0.00 37.04 3.27
545 546 6.073819 GCATTTGCCTACAAGTTTAAGGTTTG 60.074 38.462 2.90 0.00 37.04 2.93
546 547 6.532988 TTTGCCTACAAGTTTAAGGTTTGT 57.467 33.333 2.90 6.57 37.04 2.83
547 548 5.761165 TGCCTACAAGTTTAAGGTTTGTC 57.239 39.130 5.06 0.00 36.52 3.18
548 549 5.442391 TGCCTACAAGTTTAAGGTTTGTCT 58.558 37.500 5.06 0.00 36.52 3.41
549 550 5.889289 TGCCTACAAGTTTAAGGTTTGTCTT 59.111 36.000 5.06 0.00 36.52 3.01
550 551 6.183360 TGCCTACAAGTTTAAGGTTTGTCTTG 60.183 38.462 0.00 0.00 36.52 3.02
551 552 6.734871 GCCTACAAGTTTAAGGTTTGTCTTGG 60.735 42.308 0.00 7.36 37.27 3.61
552 553 6.544564 CCTACAAGTTTAAGGTTTGTCTTGGA 59.455 38.462 0.00 0.00 37.27 3.53
553 554 6.451064 ACAAGTTTAAGGTTTGTCTTGGAG 57.549 37.500 0.00 0.00 37.27 3.86
554 555 5.163550 ACAAGTTTAAGGTTTGTCTTGGAGC 60.164 40.000 0.00 0.00 37.27 4.70
555 556 4.793201 AGTTTAAGGTTTGTCTTGGAGCT 58.207 39.130 0.00 0.00 0.00 4.09
556 557 5.201243 AGTTTAAGGTTTGTCTTGGAGCTT 58.799 37.500 0.00 0.00 35.53 3.74
557 558 5.656859 AGTTTAAGGTTTGTCTTGGAGCTTT 59.343 36.000 0.00 0.00 33.62 3.51
558 559 6.154534 AGTTTAAGGTTTGTCTTGGAGCTTTT 59.845 34.615 0.00 0.00 33.62 2.27
559 560 4.655762 AAGGTTTGTCTTGGAGCTTTTC 57.344 40.909 0.00 0.00 0.00 2.29
560 561 2.959030 AGGTTTGTCTTGGAGCTTTTCC 59.041 45.455 0.00 0.00 46.98 3.13
561 562 2.959030 GGTTTGTCTTGGAGCTTTTCCT 59.041 45.455 0.00 0.00 46.92 3.36
562 563 3.004839 GGTTTGTCTTGGAGCTTTTCCTC 59.995 47.826 0.00 0.00 46.92 3.71
563 564 3.576078 TTGTCTTGGAGCTTTTCCTCA 57.424 42.857 0.00 0.00 46.92 3.86
564 565 2.851195 TGTCTTGGAGCTTTTCCTCAC 58.149 47.619 0.00 0.00 46.92 3.51
565 566 2.155279 GTCTTGGAGCTTTTCCTCACC 58.845 52.381 0.00 0.00 46.92 4.02
566 567 1.774254 TCTTGGAGCTTTTCCTCACCA 59.226 47.619 0.00 0.00 46.92 4.17
567 568 2.174639 TCTTGGAGCTTTTCCTCACCAA 59.825 45.455 0.00 0.00 46.92 3.67
568 569 2.746279 TGGAGCTTTTCCTCACCAAA 57.254 45.000 0.00 0.00 46.92 3.28
569 570 2.586425 TGGAGCTTTTCCTCACCAAAG 58.414 47.619 0.00 0.00 46.92 2.77
574 575 3.360249 CTTTTCCTCACCAAAGCAGTG 57.640 47.619 0.00 0.00 36.54 3.66
575 576 1.691196 TTTCCTCACCAAAGCAGTGG 58.309 50.000 4.22 4.22 44.92 4.00
576 577 0.823356 TTCCTCACCAAAGCAGTGGC 60.823 55.000 5.63 0.00 43.00 5.01
586 587 2.268920 GCAGTGGCTCGATCCCAA 59.731 61.111 2.20 0.00 36.96 4.12
587 588 1.817099 GCAGTGGCTCGATCCCAAG 60.817 63.158 2.20 2.81 36.96 3.61
588 589 1.153289 CAGTGGCTCGATCCCAAGG 60.153 63.158 2.20 0.00 33.39 3.61
589 590 2.514824 GTGGCTCGATCCCAAGGC 60.515 66.667 2.20 0.00 38.48 4.35
590 591 3.008517 TGGCTCGATCCCAAGGCA 61.009 61.111 2.20 8.92 44.76 4.75
591 592 2.377810 TGGCTCGATCCCAAGGCAT 61.378 57.895 2.20 0.00 42.44 4.40
592 593 1.895707 GGCTCGATCCCAAGGCATG 60.896 63.158 0.00 0.00 37.94 4.06
607 608 2.953669 CATGGCATGCTTCTTTCGC 58.046 52.632 18.92 0.00 0.00 4.70
608 609 0.171679 CATGGCATGCTTCTTTCGCA 59.828 50.000 18.92 4.44 42.25 5.10
609 610 0.171903 ATGGCATGCTTCTTTCGCAC 59.828 50.000 18.92 0.00 40.65 5.34
610 611 1.153958 GGCATGCTTCTTTCGCACC 60.154 57.895 18.92 0.00 40.65 5.01
611 612 1.589716 GGCATGCTTCTTTCGCACCT 61.590 55.000 18.92 0.00 40.65 4.00
612 613 0.179179 GCATGCTTCTTTCGCACCTC 60.179 55.000 11.37 0.00 40.65 3.85
613 614 0.449388 CATGCTTCTTTCGCACCTCC 59.551 55.000 0.00 0.00 40.65 4.30
614 615 0.326264 ATGCTTCTTTCGCACCTCCT 59.674 50.000 0.00 0.00 40.65 3.69
615 616 0.108585 TGCTTCTTTCGCACCTCCTT 59.891 50.000 0.00 0.00 31.40 3.36
616 617 0.799393 GCTTCTTTCGCACCTCCTTC 59.201 55.000 0.00 0.00 0.00 3.46
617 618 1.443802 CTTCTTTCGCACCTCCTTCC 58.556 55.000 0.00 0.00 0.00 3.46
618 619 0.036306 TTCTTTCGCACCTCCTTCCC 59.964 55.000 0.00 0.00 0.00 3.97
619 620 1.377333 CTTTCGCACCTCCTTCCCC 60.377 63.158 0.00 0.00 0.00 4.81
620 621 2.821679 CTTTCGCACCTCCTTCCCCC 62.822 65.000 0.00 0.00 0.00 5.40
621 622 3.864983 TTCGCACCTCCTTCCCCCT 62.865 63.158 0.00 0.00 0.00 4.79
622 623 3.787001 CGCACCTCCTTCCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
623 624 3.787001 GCACCTCCTTCCCCCTCG 61.787 72.222 0.00 0.00 0.00 4.63
624 625 3.083997 CACCTCCTTCCCCCTCGG 61.084 72.222 0.00 0.00 0.00 4.63
627 628 3.787001 CTCCTTCCCCCTCGGCAC 61.787 72.222 0.00 0.00 0.00 5.01
634 635 4.323477 CCCCTCGGCACCGTTCAA 62.323 66.667 9.23 0.00 40.74 2.69
635 636 2.742372 CCCTCGGCACCGTTCAAG 60.742 66.667 9.23 0.00 40.74 3.02
636 637 3.423154 CCTCGGCACCGTTCAAGC 61.423 66.667 9.23 0.00 40.74 4.01
637 638 3.777925 CTCGGCACCGTTCAAGCG 61.778 66.667 9.23 0.00 40.74 4.68
638 639 4.287781 TCGGCACCGTTCAAGCGA 62.288 61.111 9.23 0.00 40.74 4.93
639 640 3.118454 CGGCACCGTTCAAGCGAT 61.118 61.111 0.00 0.00 34.35 4.58
640 641 2.677003 CGGCACCGTTCAAGCGATT 61.677 57.895 0.00 0.00 34.35 3.34
641 642 1.154225 GGCACCGTTCAAGCGATTG 60.154 57.895 7.17 7.17 0.00 2.67
647 648 2.093973 ACCGTTCAAGCGATTGATCTCT 60.094 45.455 17.94 1.29 0.00 3.10
650 651 4.566759 CCGTTCAAGCGATTGATCTCTTTA 59.433 41.667 17.94 0.00 30.05 1.85
685 686 4.990543 TTATTAAGGCGATTGATCTGCG 57.009 40.909 0.00 0.00 0.00 5.18
802 809 4.890088 ACGGTACAGCTGAAAACTTCATA 58.110 39.130 23.35 0.00 39.30 2.15
938 4218 1.582424 CACAAACACACACGCACGG 60.582 57.895 0.00 0.00 0.00 4.94
941 4236 2.804759 AAACACACACGCACGGACG 61.805 57.895 0.00 0.00 39.50 4.79
965 4260 1.006571 CTGCGTACACGAACCACCT 60.007 57.895 5.84 0.00 43.02 4.00
966 4261 1.007038 TGCGTACACGAACCACCTC 60.007 57.895 5.84 0.00 43.02 3.85
967 4262 1.288127 GCGTACACGAACCACCTCT 59.712 57.895 5.84 0.00 43.02 3.69
968 4263 1.007336 GCGTACACGAACCACCTCTG 61.007 60.000 5.84 0.00 43.02 3.35
979 4283 2.175202 ACCACCTCTGAAGTAGCTCTG 58.825 52.381 0.00 0.00 0.00 3.35
985 4289 3.509575 CCTCTGAAGTAGCTCTGAAGTGT 59.490 47.826 0.00 0.00 0.00 3.55
1107 4413 2.509336 CACCATGAGCGGTCCGTC 60.509 66.667 13.94 9.76 37.07 4.79
1110 4416 2.573869 CATGAGCGGTCCGTCAGT 59.426 61.111 13.94 3.74 0.00 3.41
2016 5358 9.352191 AGATGATGAATAGAAGAAGGAATTTGG 57.648 33.333 0.00 0.00 0.00 3.28
2025 5367 1.202348 GAAGGAATTTGGGCAACTCCG 59.798 52.381 0.00 0.00 34.94 4.63
2054 5396 5.635280 ACGTCTGATTGTCACTCAATGTTAG 59.365 40.000 0.00 0.00 45.49 2.34
2115 5460 7.484035 AATTTCAGAGTTCAGTACACTTCAC 57.516 36.000 0.00 0.00 0.00 3.18
2136 5482 4.796312 CACGTTGTTAAAAACAGAAGTGGG 59.204 41.667 9.18 0.00 43.27 4.61
2186 5532 2.831685 AGATGTACAACTGGACGCAA 57.168 45.000 4.64 0.00 0.00 4.85
2247 5593 2.203480 GGCCCAACACCTTGCTGA 60.203 61.111 0.00 0.00 0.00 4.26
2249 5595 1.529244 GCCCAACACCTTGCTGACT 60.529 57.895 0.00 0.00 0.00 3.41
2282 5648 1.028905 CCCAAAAACAAGCTCGGTCA 58.971 50.000 0.00 0.00 0.00 4.02
2438 5813 1.128200 ACAGCCGAAGCCCATATACA 58.872 50.000 0.00 0.00 41.25 2.29
2473 5848 5.066375 CGTCCTCTGAATGAAAAATATGCCA 59.934 40.000 0.00 0.00 0.00 4.92
2586 5961 2.599082 CAGCTATCGTTTCTGGTCGTTC 59.401 50.000 0.00 0.00 0.00 3.95
2602 5977 2.811431 TCGTTCGTCATCAAAATTGCCT 59.189 40.909 0.00 0.00 0.00 4.75
2603 5978 3.120338 TCGTTCGTCATCAAAATTGCCTC 60.120 43.478 0.00 0.00 0.00 4.70
2611 5986 5.047377 GTCATCAAAATTGCCTCCCAAGTTA 60.047 40.000 0.00 0.00 40.50 2.24
2642 6017 2.748647 ACCAATGCCGCCCGTAAC 60.749 61.111 0.00 0.00 0.00 2.50
2700 6075 5.967088 TCTGTTTGGTTCATCTAGAGCTAC 58.033 41.667 0.00 0.00 0.00 3.58
2746 6121 0.824109 CCACCTGATTCGCTAGACCA 59.176 55.000 0.00 0.00 0.00 4.02
2755 6130 0.738975 TCGCTAGACCATCACTTCCG 59.261 55.000 0.00 0.00 0.00 4.30
2756 6131 0.872021 CGCTAGACCATCACTTCCGC 60.872 60.000 0.00 0.00 0.00 5.54
2759 6134 2.748605 CTAGACCATCACTTCCGCATC 58.251 52.381 0.00 0.00 0.00 3.91
2760 6135 0.179100 AGACCATCACTTCCGCATCG 60.179 55.000 0.00 0.00 0.00 3.84
2782 6157 3.372440 GGAGACCATGGTTTGATCCTT 57.628 47.619 20.85 0.00 0.00 3.36
2829 6204 7.661437 GCCTTTTCTCCTTGAATTTTAATTGGT 59.339 33.333 0.00 0.00 34.24 3.67
2846 6221 2.752030 TGGTGTAAGATAGAGCTGCCT 58.248 47.619 0.00 0.00 0.00 4.75
2847 6222 2.695666 TGGTGTAAGATAGAGCTGCCTC 59.304 50.000 0.00 0.00 38.42 4.70
2848 6223 2.287909 GGTGTAAGATAGAGCTGCCTCG 60.288 54.545 0.00 0.00 43.05 4.63
2849 6224 1.338337 TGTAAGATAGAGCTGCCTCGC 59.662 52.381 0.00 0.00 43.05 5.03
2850 6225 0.962489 TAAGATAGAGCTGCCTCGCC 59.038 55.000 0.00 0.00 43.05 5.54
2851 6226 0.758685 AAGATAGAGCTGCCTCGCCT 60.759 55.000 0.00 0.00 43.05 5.52
2852 6227 1.006337 GATAGAGCTGCCTCGCCTG 60.006 63.158 0.00 0.00 43.05 4.85
2853 6228 2.433231 GATAGAGCTGCCTCGCCTGG 62.433 65.000 0.00 0.00 43.05 4.45
2862 6237 4.694233 CTCGCCTGGCAGCACAGT 62.694 66.667 20.29 0.00 36.75 3.55
2863 6238 4.254709 TCGCCTGGCAGCACAGTT 62.255 61.111 20.29 0.00 36.75 3.16
2864 6239 3.730761 CGCCTGGCAGCACAGTTC 61.731 66.667 20.29 2.03 36.75 3.01
2865 6240 2.595463 GCCTGGCAGCACAGTTCA 60.595 61.111 15.17 0.00 36.75 3.18
2866 6241 2.195567 GCCTGGCAGCACAGTTCAA 61.196 57.895 15.17 0.00 36.75 2.69
2867 6242 1.530013 GCCTGGCAGCACAGTTCAAT 61.530 55.000 15.17 0.00 36.75 2.57
2868 6243 0.963962 CCTGGCAGCACAGTTCAATT 59.036 50.000 9.56 0.00 36.75 2.32
2869 6244 1.342174 CCTGGCAGCACAGTTCAATTT 59.658 47.619 9.56 0.00 36.75 1.82
2870 6245 2.608752 CCTGGCAGCACAGTTCAATTTC 60.609 50.000 9.56 0.00 36.75 2.17
2871 6246 2.030371 TGGCAGCACAGTTCAATTTCA 58.970 42.857 0.00 0.00 0.00 2.69
2872 6247 2.034939 TGGCAGCACAGTTCAATTTCAG 59.965 45.455 0.00 0.00 0.00 3.02
2873 6248 2.056577 GCAGCACAGTTCAATTTCAGC 58.943 47.619 0.00 0.00 0.00 4.26
2874 6249 2.669364 CAGCACAGTTCAATTTCAGCC 58.331 47.619 0.00 0.00 0.00 4.85
2875 6250 1.615392 AGCACAGTTCAATTTCAGCCC 59.385 47.619 0.00 0.00 0.00 5.19
2876 6251 1.340889 GCACAGTTCAATTTCAGCCCA 59.659 47.619 0.00 0.00 0.00 5.36
2877 6252 2.608752 GCACAGTTCAATTTCAGCCCAG 60.609 50.000 0.00 0.00 0.00 4.45
2878 6253 1.615392 ACAGTTCAATTTCAGCCCAGC 59.385 47.619 0.00 0.00 0.00 4.85
2879 6254 1.891150 CAGTTCAATTTCAGCCCAGCT 59.109 47.619 0.00 0.00 40.77 4.24
2880 6255 3.084039 CAGTTCAATTTCAGCCCAGCTA 58.916 45.455 0.00 0.00 36.40 3.32
2881 6256 3.698040 CAGTTCAATTTCAGCCCAGCTAT 59.302 43.478 0.00 0.00 36.40 2.97
2882 6257 4.159135 CAGTTCAATTTCAGCCCAGCTATT 59.841 41.667 0.00 0.00 36.40 1.73
2883 6258 4.774200 AGTTCAATTTCAGCCCAGCTATTT 59.226 37.500 0.00 0.00 36.40 1.40
2884 6259 5.246883 AGTTCAATTTCAGCCCAGCTATTTT 59.753 36.000 0.00 0.00 36.40 1.82
2885 6260 5.743636 TCAATTTCAGCCCAGCTATTTTT 57.256 34.783 0.00 0.00 36.40 1.94
2904 6279 5.427036 TTTTTCGCGGATTCAAGTACTTT 57.573 34.783 6.13 0.00 0.00 2.66
2905 6280 5.427036 TTTTCGCGGATTCAAGTACTTTT 57.573 34.783 6.13 0.00 0.00 2.27
2906 6281 4.398549 TTCGCGGATTCAAGTACTTTTG 57.601 40.909 6.13 0.00 0.00 2.44
2907 6282 3.655486 TCGCGGATTCAAGTACTTTTGA 58.345 40.909 6.13 0.00 35.38 2.69
2909 6284 4.151689 TCGCGGATTCAAGTACTTTTGAAG 59.848 41.667 6.13 4.21 46.70 3.02
2910 6285 4.084013 CGCGGATTCAAGTACTTTTGAAGT 60.084 41.667 13.83 4.75 46.70 3.01
2911 6286 5.119588 CGCGGATTCAAGTACTTTTGAAGTA 59.880 40.000 13.83 0.00 46.70 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.606631 TGTTTTTGTTTTTAGACAATAGGCAAT 57.393 25.926 0.00 0.00 39.12 3.56
45 46 8.874816 GTGTTTTTGTTTTTAGACAATAGGCAA 58.125 29.630 0.00 0.00 39.12 4.52
46 47 7.492994 GGTGTTTTTGTTTTTAGACAATAGGCA 59.507 33.333 0.00 0.00 39.12 4.75
47 48 7.709182 AGGTGTTTTTGTTTTTAGACAATAGGC 59.291 33.333 0.00 0.00 39.12 3.93
48 49 9.244799 GAGGTGTTTTTGTTTTTAGACAATAGG 57.755 33.333 0.00 0.00 39.12 2.57
49 50 9.796120 TGAGGTGTTTTTGTTTTTAGACAATAG 57.204 29.630 0.00 0.00 39.12 1.73
51 52 9.150348 CTTGAGGTGTTTTTGTTTTTAGACAAT 57.850 29.630 0.00 0.00 39.12 2.71
52 53 8.361139 TCTTGAGGTGTTTTTGTTTTTAGACAA 58.639 29.630 0.00 0.00 37.73 3.18
53 54 7.887381 TCTTGAGGTGTTTTTGTTTTTAGACA 58.113 30.769 0.00 0.00 0.00 3.41
54 55 8.751302 TTCTTGAGGTGTTTTTGTTTTTAGAC 57.249 30.769 0.00 0.00 0.00 2.59
55 56 9.418045 CTTTCTTGAGGTGTTTTTGTTTTTAGA 57.582 29.630 0.00 0.00 0.00 2.10
56 57 8.168626 GCTTTCTTGAGGTGTTTTTGTTTTTAG 58.831 33.333 0.00 0.00 0.00 1.85
57 58 7.657761 TGCTTTCTTGAGGTGTTTTTGTTTTTA 59.342 29.630 0.00 0.00 0.00 1.52
58 59 6.484977 TGCTTTCTTGAGGTGTTTTTGTTTTT 59.515 30.769 0.00 0.00 0.00 1.94
59 60 5.994668 TGCTTTCTTGAGGTGTTTTTGTTTT 59.005 32.000 0.00 0.00 0.00 2.43
60 61 5.546526 TGCTTTCTTGAGGTGTTTTTGTTT 58.453 33.333 0.00 0.00 0.00 2.83
61 62 5.146010 TGCTTTCTTGAGGTGTTTTTGTT 57.854 34.783 0.00 0.00 0.00 2.83
62 63 4.799564 TGCTTTCTTGAGGTGTTTTTGT 57.200 36.364 0.00 0.00 0.00 2.83
63 64 5.868801 TCTTTGCTTTCTTGAGGTGTTTTTG 59.131 36.000 0.00 0.00 0.00 2.44
64 65 6.036577 TCTTTGCTTTCTTGAGGTGTTTTT 57.963 33.333 0.00 0.00 0.00 1.94
65 66 5.659440 TCTTTGCTTTCTTGAGGTGTTTT 57.341 34.783 0.00 0.00 0.00 2.43
66 67 5.659440 TTCTTTGCTTTCTTGAGGTGTTT 57.341 34.783 0.00 0.00 0.00 2.83
67 68 5.659440 TTTCTTTGCTTTCTTGAGGTGTT 57.341 34.783 0.00 0.00 0.00 3.32
68 69 5.659440 TTTTCTTTGCTTTCTTGAGGTGT 57.341 34.783 0.00 0.00 0.00 4.16
69 70 6.332630 TCTTTTTCTTTGCTTTCTTGAGGTG 58.667 36.000 0.00 0.00 0.00 4.00
70 71 6.530019 TCTTTTTCTTTGCTTTCTTGAGGT 57.470 33.333 0.00 0.00 0.00 3.85
71 72 5.461407 GCTCTTTTTCTTTGCTTTCTTGAGG 59.539 40.000 0.00 0.00 0.00 3.86
72 73 6.271566 AGCTCTTTTTCTTTGCTTTCTTGAG 58.728 36.000 0.00 0.00 0.00 3.02
73 74 6.212888 AGCTCTTTTTCTTTGCTTTCTTGA 57.787 33.333 0.00 0.00 0.00 3.02
74 75 7.917505 TCTTAGCTCTTTTTCTTTGCTTTCTTG 59.082 33.333 0.00 0.00 35.47 3.02
75 76 8.000780 TCTTAGCTCTTTTTCTTTGCTTTCTT 57.999 30.769 0.00 0.00 35.47 2.52
76 77 7.573968 TCTTAGCTCTTTTTCTTTGCTTTCT 57.426 32.000 0.00 0.00 35.47 2.52
77 78 8.634475 TTTCTTAGCTCTTTTTCTTTGCTTTC 57.366 30.769 0.00 0.00 35.47 2.62
78 79 9.435688 TTTTTCTTAGCTCTTTTTCTTTGCTTT 57.564 25.926 0.00 0.00 35.47 3.51
138 139 9.671279 ACTCATTTTCATTGGTTTCTTTTTCTT 57.329 25.926 0.00 0.00 0.00 2.52
139 140 9.101655 CACTCATTTTCATTGGTTTCTTTTTCT 57.898 29.630 0.00 0.00 0.00 2.52
140 141 9.097257 TCACTCATTTTCATTGGTTTCTTTTTC 57.903 29.630 0.00 0.00 0.00 2.29
141 142 9.447157 TTCACTCATTTTCATTGGTTTCTTTTT 57.553 25.926 0.00 0.00 0.00 1.94
142 143 9.447157 TTTCACTCATTTTCATTGGTTTCTTTT 57.553 25.926 0.00 0.00 0.00 2.27
143 144 9.447157 TTTTCACTCATTTTCATTGGTTTCTTT 57.553 25.926 0.00 0.00 0.00 2.52
144 145 8.882736 GTTTTCACTCATTTTCATTGGTTTCTT 58.117 29.630 0.00 0.00 0.00 2.52
145 146 8.040132 TGTTTTCACTCATTTTCATTGGTTTCT 58.960 29.630 0.00 0.00 0.00 2.52
146 147 8.195617 TGTTTTCACTCATTTTCATTGGTTTC 57.804 30.769 0.00 0.00 0.00 2.78
147 148 8.558973 TTGTTTTCACTCATTTTCATTGGTTT 57.441 26.923 0.00 0.00 0.00 3.27
148 149 8.558973 TTTGTTTTCACTCATTTTCATTGGTT 57.441 26.923 0.00 0.00 0.00 3.67
149 150 7.823799 ACTTTGTTTTCACTCATTTTCATTGGT 59.176 29.630 0.00 0.00 0.00 3.67
150 151 8.200364 ACTTTGTTTTCACTCATTTTCATTGG 57.800 30.769 0.00 0.00 0.00 3.16
171 172 9.587772 GGCTTTTCTTCTTCTTTCTTTTACTTT 57.412 29.630 0.00 0.00 0.00 2.66
172 173 7.915923 CGGCTTTTCTTCTTCTTTCTTTTACTT 59.084 33.333 0.00 0.00 0.00 2.24
173 174 7.282450 TCGGCTTTTCTTCTTCTTTCTTTTACT 59.718 33.333 0.00 0.00 0.00 2.24
174 175 7.415229 TCGGCTTTTCTTCTTCTTTCTTTTAC 58.585 34.615 0.00 0.00 0.00 2.01
175 176 7.562454 TCGGCTTTTCTTCTTCTTTCTTTTA 57.438 32.000 0.00 0.00 0.00 1.52
176 177 6.451064 TCGGCTTTTCTTCTTCTTTCTTTT 57.549 33.333 0.00 0.00 0.00 2.27
177 178 6.641169 ATCGGCTTTTCTTCTTCTTTCTTT 57.359 33.333 0.00 0.00 0.00 2.52
178 179 7.745620 TTATCGGCTTTTCTTCTTCTTTCTT 57.254 32.000 0.00 0.00 0.00 2.52
179 180 7.745620 TTTATCGGCTTTTCTTCTTCTTTCT 57.254 32.000 0.00 0.00 0.00 2.52
180 181 8.691727 GTTTTTATCGGCTTTTCTTCTTCTTTC 58.308 33.333 0.00 0.00 0.00 2.62
181 182 8.194769 TGTTTTTATCGGCTTTTCTTCTTCTTT 58.805 29.630 0.00 0.00 0.00 2.52
182 183 7.712797 TGTTTTTATCGGCTTTTCTTCTTCTT 58.287 30.769 0.00 0.00 0.00 2.52
183 184 7.272037 TGTTTTTATCGGCTTTTCTTCTTCT 57.728 32.000 0.00 0.00 0.00 2.85
184 185 7.924103 TTGTTTTTATCGGCTTTTCTTCTTC 57.076 32.000 0.00 0.00 0.00 2.87
185 186 9.974980 TTATTGTTTTTATCGGCTTTTCTTCTT 57.025 25.926 0.00 0.00 0.00 2.52
186 187 9.974980 TTTATTGTTTTTATCGGCTTTTCTTCT 57.025 25.926 0.00 0.00 0.00 2.85
211 212 6.862711 TTCTTTTGTTTTTCACCGGTTTTT 57.137 29.167 2.97 0.00 0.00 1.94
212 213 6.566942 GCTTTCTTTTGTTTTTCACCGGTTTT 60.567 34.615 2.97 0.00 0.00 2.43
213 214 5.106869 GCTTTCTTTTGTTTTTCACCGGTTT 60.107 36.000 2.97 0.00 0.00 3.27
214 215 4.390603 GCTTTCTTTTGTTTTTCACCGGTT 59.609 37.500 2.97 0.00 0.00 4.44
215 216 3.930229 GCTTTCTTTTGTTTTTCACCGGT 59.070 39.130 0.00 0.00 0.00 5.28
216 217 3.929610 TGCTTTCTTTTGTTTTTCACCGG 59.070 39.130 0.00 0.00 0.00 5.28
217 218 5.120053 ACTTGCTTTCTTTTGTTTTTCACCG 59.880 36.000 0.00 0.00 0.00 4.94
218 219 6.480524 ACTTGCTTTCTTTTGTTTTTCACC 57.519 33.333 0.00 0.00 0.00 4.02
219 220 9.871299 TTTTACTTGCTTTCTTTTGTTTTTCAC 57.129 25.926 0.00 0.00 0.00 3.18
226 227 9.877137 CTTTTGTTTTTACTTGCTTTCTTTTGT 57.123 25.926 0.00 0.00 0.00 2.83
254 255 8.661257 CGGTCTTGTTTTTCTTTGGTTTTTAAT 58.339 29.630 0.00 0.00 0.00 1.40
255 256 7.117956 CCGGTCTTGTTTTTCTTTGGTTTTTAA 59.882 33.333 0.00 0.00 0.00 1.52
256 257 6.590677 CCGGTCTTGTTTTTCTTTGGTTTTTA 59.409 34.615 0.00 0.00 0.00 1.52
257 258 5.410132 CCGGTCTTGTTTTTCTTTGGTTTTT 59.590 36.000 0.00 0.00 0.00 1.94
258 259 4.932799 CCGGTCTTGTTTTTCTTTGGTTTT 59.067 37.500 0.00 0.00 0.00 2.43
259 260 4.500127 CCGGTCTTGTTTTTCTTTGGTTT 58.500 39.130 0.00 0.00 0.00 3.27
260 261 3.677700 GCCGGTCTTGTTTTTCTTTGGTT 60.678 43.478 1.90 0.00 0.00 3.67
261 262 2.159156 GCCGGTCTTGTTTTTCTTTGGT 60.159 45.455 1.90 0.00 0.00 3.67
262 263 2.469826 GCCGGTCTTGTTTTTCTTTGG 58.530 47.619 1.90 0.00 0.00 3.28
263 264 2.116366 CGCCGGTCTTGTTTTTCTTTG 58.884 47.619 1.90 0.00 0.00 2.77
264 265 1.535226 GCGCCGGTCTTGTTTTTCTTT 60.535 47.619 1.90 0.00 0.00 2.52
265 266 0.030235 GCGCCGGTCTTGTTTTTCTT 59.970 50.000 1.90 0.00 0.00 2.52
266 267 1.652563 GCGCCGGTCTTGTTTTTCT 59.347 52.632 1.90 0.00 0.00 2.52
267 268 1.724581 CGCGCCGGTCTTGTTTTTC 60.725 57.895 1.90 0.00 0.00 2.29
268 269 2.113131 CTCGCGCCGGTCTTGTTTTT 62.113 55.000 1.90 0.00 0.00 1.94
269 270 2.589442 TCGCGCCGGTCTTGTTTT 60.589 55.556 1.90 0.00 0.00 2.43
270 271 3.041940 CTCGCGCCGGTCTTGTTT 61.042 61.111 1.90 0.00 0.00 2.83
280 281 4.789075 TGTAGGTTCGCTCGCGCC 62.789 66.667 0.00 3.13 39.59 6.53
281 282 2.807895 TTGTAGGTTCGCTCGCGC 60.808 61.111 0.00 0.00 39.59 6.86
282 283 0.179181 TAGTTGTAGGTTCGCTCGCG 60.179 55.000 0.00 0.00 41.35 5.87
283 284 1.266466 GTAGTTGTAGGTTCGCTCGC 58.734 55.000 0.00 0.00 0.00 5.03
284 285 2.248487 GTGTAGTTGTAGGTTCGCTCG 58.752 52.381 0.00 0.00 0.00 5.03
285 286 3.057736 TCTGTGTAGTTGTAGGTTCGCTC 60.058 47.826 0.00 0.00 0.00 5.03
286 287 2.889045 TCTGTGTAGTTGTAGGTTCGCT 59.111 45.455 0.00 0.00 0.00 4.93
287 288 3.293311 TCTGTGTAGTTGTAGGTTCGC 57.707 47.619 0.00 0.00 0.00 4.70
288 289 4.680110 CACTTCTGTGTAGTTGTAGGTTCG 59.320 45.833 0.00 0.00 39.24 3.95
303 304 1.143684 AGTCCCATGCAACACTTCTGT 59.856 47.619 0.00 0.00 0.00 3.41
304 305 1.538512 CAGTCCCATGCAACACTTCTG 59.461 52.381 0.00 0.00 0.00 3.02
305 306 1.901591 CAGTCCCATGCAACACTTCT 58.098 50.000 0.00 0.00 0.00 2.85
306 307 0.242017 GCAGTCCCATGCAACACTTC 59.758 55.000 0.00 0.00 45.77 3.01
307 308 1.518056 CGCAGTCCCATGCAACACTT 61.518 55.000 0.00 0.00 46.87 3.16
308 309 1.968017 CGCAGTCCCATGCAACACT 60.968 57.895 0.00 0.00 46.87 3.55
309 310 2.562912 CGCAGTCCCATGCAACAC 59.437 61.111 0.00 0.00 46.87 3.32
310 311 2.462125 TAGCGCAGTCCCATGCAACA 62.462 55.000 11.47 0.00 46.87 3.33
311 312 1.745115 TAGCGCAGTCCCATGCAAC 60.745 57.895 11.47 0.00 46.87 4.17
312 313 1.745115 GTAGCGCAGTCCCATGCAA 60.745 57.895 11.47 0.00 46.87 4.08
313 314 2.125147 GTAGCGCAGTCCCATGCA 60.125 61.111 11.47 0.00 46.87 3.96
314 315 1.450312 AAGTAGCGCAGTCCCATGC 60.450 57.895 11.47 0.00 42.95 4.06
315 316 1.709147 GCAAGTAGCGCAGTCCCATG 61.709 60.000 11.47 0.00 0.00 3.66
316 317 1.450312 GCAAGTAGCGCAGTCCCAT 60.450 57.895 11.47 0.00 0.00 4.00
317 318 2.047274 GCAAGTAGCGCAGTCCCA 60.047 61.111 11.47 0.00 0.00 4.37
326 327 1.467920 AATCAAGCTGGGCAAGTAGC 58.532 50.000 0.00 0.00 44.65 3.58
327 328 2.416431 GCAAATCAAGCTGGGCAAGTAG 60.416 50.000 0.00 0.00 0.00 2.57
328 329 1.545582 GCAAATCAAGCTGGGCAAGTA 59.454 47.619 0.00 0.00 0.00 2.24
329 330 0.319405 GCAAATCAAGCTGGGCAAGT 59.681 50.000 0.00 0.00 0.00 3.16
330 331 0.606604 AGCAAATCAAGCTGGGCAAG 59.393 50.000 0.00 0.00 41.61 4.01
331 332 1.050204 AAGCAAATCAAGCTGGGCAA 58.950 45.000 0.00 0.00 42.53 4.52
332 333 0.319083 CAAGCAAATCAAGCTGGGCA 59.681 50.000 0.00 0.00 42.53 5.36
333 334 1.017701 GCAAGCAAATCAAGCTGGGC 61.018 55.000 0.00 0.00 42.53 5.36
334 335 0.390735 GGCAAGCAAATCAAGCTGGG 60.391 55.000 0.00 0.00 42.53 4.45
335 336 0.606604 AGGCAAGCAAATCAAGCTGG 59.393 50.000 0.00 0.00 42.53 4.85
336 337 1.000506 ACAGGCAAGCAAATCAAGCTG 59.999 47.619 0.00 0.00 42.53 4.24
337 338 1.335145 ACAGGCAAGCAAATCAAGCT 58.665 45.000 0.00 0.00 45.97 3.74
338 339 3.302365 TTACAGGCAAGCAAATCAAGC 57.698 42.857 0.00 0.00 0.00 4.01
360 361 5.768164 ACTGGACATTACGAATCACCTTTTT 59.232 36.000 0.00 0.00 0.00 1.94
361 362 5.313712 ACTGGACATTACGAATCACCTTTT 58.686 37.500 0.00 0.00 0.00 2.27
362 363 4.906618 ACTGGACATTACGAATCACCTTT 58.093 39.130 0.00 0.00 0.00 3.11
363 364 4.020573 TGACTGGACATTACGAATCACCTT 60.021 41.667 0.00 0.00 0.00 3.50
364 365 3.513912 TGACTGGACATTACGAATCACCT 59.486 43.478 0.00 0.00 0.00 4.00
365 366 3.857052 TGACTGGACATTACGAATCACC 58.143 45.455 0.00 0.00 0.00 4.02
366 367 4.092968 GGTTGACTGGACATTACGAATCAC 59.907 45.833 0.00 0.00 0.00 3.06
367 368 4.250464 GGTTGACTGGACATTACGAATCA 58.750 43.478 0.00 0.00 0.00 2.57
368 369 4.250464 TGGTTGACTGGACATTACGAATC 58.750 43.478 0.00 0.00 0.00 2.52
369 370 4.253685 CTGGTTGACTGGACATTACGAAT 58.746 43.478 0.00 0.00 0.00 3.34
370 371 3.659786 CTGGTTGACTGGACATTACGAA 58.340 45.455 0.00 0.00 0.00 3.85
371 372 2.611971 GCTGGTTGACTGGACATTACGA 60.612 50.000 0.00 0.00 0.00 3.43
372 373 1.732259 GCTGGTTGACTGGACATTACG 59.268 52.381 0.00 0.00 0.00 3.18
373 374 2.084546 GGCTGGTTGACTGGACATTAC 58.915 52.381 0.00 0.00 0.00 1.89
374 375 1.702401 TGGCTGGTTGACTGGACATTA 59.298 47.619 0.00 0.00 0.00 1.90
375 376 0.478072 TGGCTGGTTGACTGGACATT 59.522 50.000 0.00 0.00 0.00 2.71
376 377 0.478072 TTGGCTGGTTGACTGGACAT 59.522 50.000 0.00 0.00 0.00 3.06
377 378 0.465460 GTTGGCTGGTTGACTGGACA 60.465 55.000 0.00 0.00 0.00 4.02
378 379 0.465460 TGTTGGCTGGTTGACTGGAC 60.465 55.000 0.00 0.00 0.00 4.02
379 380 0.478072 ATGTTGGCTGGTTGACTGGA 59.522 50.000 0.00 0.00 0.00 3.86
380 381 2.198827 TATGTTGGCTGGTTGACTGG 57.801 50.000 0.00 0.00 0.00 4.00
381 382 3.058016 CAGTTATGTTGGCTGGTTGACTG 60.058 47.826 0.00 0.00 0.00 3.51
382 383 3.149196 CAGTTATGTTGGCTGGTTGACT 58.851 45.455 0.00 0.00 0.00 3.41
383 384 2.228822 CCAGTTATGTTGGCTGGTTGAC 59.771 50.000 0.00 0.00 43.42 3.18
384 385 2.513753 CCAGTTATGTTGGCTGGTTGA 58.486 47.619 0.00 0.00 43.42 3.18
385 386 1.545582 CCCAGTTATGTTGGCTGGTTG 59.454 52.381 8.71 0.00 46.09 3.77
386 387 1.549950 CCCCAGTTATGTTGGCTGGTT 60.550 52.381 8.71 0.00 46.09 3.67
387 388 0.039618 CCCCAGTTATGTTGGCTGGT 59.960 55.000 8.71 0.00 46.09 4.00
388 389 0.039618 ACCCCAGTTATGTTGGCTGG 59.960 55.000 0.00 0.00 46.83 4.85
389 390 1.923356 AACCCCAGTTATGTTGGCTG 58.077 50.000 0.00 0.00 33.27 4.85
390 391 2.158385 TCAAACCCCAGTTATGTTGGCT 60.158 45.455 0.00 0.00 34.19 4.75
391 392 2.029380 GTCAAACCCCAGTTATGTTGGC 60.029 50.000 0.00 0.00 34.19 4.52
392 393 3.496331 AGTCAAACCCCAGTTATGTTGG 58.504 45.455 0.00 0.00 34.19 3.77
393 394 4.141287 TGAGTCAAACCCCAGTTATGTTG 58.859 43.478 0.00 0.00 34.19 3.33
394 395 4.398319 CTGAGTCAAACCCCAGTTATGTT 58.602 43.478 0.00 0.00 34.19 2.71
395 396 3.810743 GCTGAGTCAAACCCCAGTTATGT 60.811 47.826 0.00 0.00 34.19 2.29
396 397 2.749621 GCTGAGTCAAACCCCAGTTATG 59.250 50.000 0.00 0.00 34.19 1.90
397 398 2.290960 GGCTGAGTCAAACCCCAGTTAT 60.291 50.000 0.00 0.00 34.19 1.89
398 399 1.073284 GGCTGAGTCAAACCCCAGTTA 59.927 52.381 0.00 0.00 34.19 2.24
399 400 0.178990 GGCTGAGTCAAACCCCAGTT 60.179 55.000 0.00 0.00 38.03 3.16
400 401 1.352622 TGGCTGAGTCAAACCCCAGT 61.353 55.000 8.93 0.00 0.00 4.00
401 402 0.890996 GTGGCTGAGTCAAACCCCAG 60.891 60.000 8.93 0.00 0.00 4.45
402 403 1.150536 GTGGCTGAGTCAAACCCCA 59.849 57.895 8.93 3.96 0.00 4.96
403 404 0.178990 AAGTGGCTGAGTCAAACCCC 60.179 55.000 8.93 0.00 0.00 4.95
404 405 1.239347 GAAGTGGCTGAGTCAAACCC 58.761 55.000 8.93 3.83 0.00 4.11
405 406 1.876156 CTGAAGTGGCTGAGTCAAACC 59.124 52.381 0.00 5.12 0.00 3.27
406 407 1.265365 GCTGAAGTGGCTGAGTCAAAC 59.735 52.381 0.00 0.00 0.00 2.93
407 408 1.597742 GCTGAAGTGGCTGAGTCAAA 58.402 50.000 0.00 0.00 0.00 2.69
408 409 0.601046 CGCTGAAGTGGCTGAGTCAA 60.601 55.000 0.00 0.00 0.00 3.18
409 410 1.005748 CGCTGAAGTGGCTGAGTCA 60.006 57.895 0.00 0.00 0.00 3.41
410 411 0.319900 TTCGCTGAAGTGGCTGAGTC 60.320 55.000 0.00 0.00 0.00 3.36
411 412 0.322975 ATTCGCTGAAGTGGCTGAGT 59.677 50.000 0.00 0.00 0.00 3.41
412 413 1.929836 GTATTCGCTGAAGTGGCTGAG 59.070 52.381 0.00 0.00 0.00 3.35
413 414 1.405526 GGTATTCGCTGAAGTGGCTGA 60.406 52.381 0.00 0.00 0.00 4.26
414 415 1.009829 GGTATTCGCTGAAGTGGCTG 58.990 55.000 0.00 0.00 0.00 4.85
415 416 0.613260 TGGTATTCGCTGAAGTGGCT 59.387 50.000 0.00 0.00 0.00 4.75
416 417 1.448985 TTGGTATTCGCTGAAGTGGC 58.551 50.000 0.00 0.00 0.00 5.01
417 418 4.497473 TTTTTGGTATTCGCTGAAGTGG 57.503 40.909 0.00 0.00 0.00 4.00
437 438 9.447040 GTCTATTTTGAACTTTTAGAGCGTTTT 57.553 29.630 0.00 0.00 0.00 2.43
438 439 8.074370 GGTCTATTTTGAACTTTTAGAGCGTTT 58.926 33.333 0.00 0.00 30.56 3.60
439 440 7.582352 GGTCTATTTTGAACTTTTAGAGCGTT 58.418 34.615 0.00 0.00 30.56 4.84
440 441 7.130303 GGTCTATTTTGAACTTTTAGAGCGT 57.870 36.000 0.00 0.00 30.56 5.07
442 443 6.370718 TCCGGTCTATTTTGAACTTTTAGAGC 59.629 38.462 0.00 0.00 35.25 4.09
443 444 7.900782 TCCGGTCTATTTTGAACTTTTAGAG 57.099 36.000 0.00 0.00 0.00 2.43
444 445 8.857694 ATTCCGGTCTATTTTGAACTTTTAGA 57.142 30.769 0.00 0.00 0.00 2.10
445 446 8.726988 TGATTCCGGTCTATTTTGAACTTTTAG 58.273 33.333 0.00 0.00 0.00 1.85
446 447 8.624367 TGATTCCGGTCTATTTTGAACTTTTA 57.376 30.769 0.00 0.00 0.00 1.52
447 448 7.447238 TCTGATTCCGGTCTATTTTGAACTTTT 59.553 33.333 0.00 0.00 0.00 2.27
448 449 6.940298 TCTGATTCCGGTCTATTTTGAACTTT 59.060 34.615 0.00 0.00 0.00 2.66
449 450 6.472887 TCTGATTCCGGTCTATTTTGAACTT 58.527 36.000 0.00 0.00 0.00 2.66
450 451 6.049955 TCTGATTCCGGTCTATTTTGAACT 57.950 37.500 0.00 0.00 0.00 3.01
451 452 6.106673 TCTCTGATTCCGGTCTATTTTGAAC 58.893 40.000 0.00 0.00 0.00 3.18
452 453 6.294361 TCTCTGATTCCGGTCTATTTTGAA 57.706 37.500 0.00 0.00 0.00 2.69
453 454 5.932619 TCTCTGATTCCGGTCTATTTTGA 57.067 39.130 0.00 0.00 0.00 2.69
454 455 7.559590 AAATCTCTGATTCCGGTCTATTTTG 57.440 36.000 0.00 0.00 0.00 2.44
455 456 8.462016 CAAAAATCTCTGATTCCGGTCTATTTT 58.538 33.333 0.00 2.57 0.00 1.82
456 457 7.611855 ACAAAAATCTCTGATTCCGGTCTATTT 59.388 33.333 0.00 0.00 0.00 1.40
457 458 7.112779 ACAAAAATCTCTGATTCCGGTCTATT 58.887 34.615 0.00 0.00 0.00 1.73
458 459 6.653989 ACAAAAATCTCTGATTCCGGTCTAT 58.346 36.000 0.00 0.00 0.00 1.98
459 460 6.049955 ACAAAAATCTCTGATTCCGGTCTA 57.950 37.500 0.00 0.00 0.00 2.59
460 461 4.911390 ACAAAAATCTCTGATTCCGGTCT 58.089 39.130 0.00 0.00 0.00 3.85
461 462 6.719365 CATACAAAAATCTCTGATTCCGGTC 58.281 40.000 0.00 0.00 0.00 4.79
462 463 5.066505 GCATACAAAAATCTCTGATTCCGGT 59.933 40.000 0.00 0.00 0.00 5.28
463 464 5.506317 GGCATACAAAAATCTCTGATTCCGG 60.506 44.000 0.00 0.00 0.00 5.14
464 465 5.514279 GGCATACAAAAATCTCTGATTCCG 58.486 41.667 0.00 0.00 0.00 4.30
465 466 5.296780 TCGGCATACAAAAATCTCTGATTCC 59.703 40.000 0.00 0.00 0.00 3.01
466 467 6.363577 TCGGCATACAAAAATCTCTGATTC 57.636 37.500 0.00 0.00 0.00 2.52
467 468 6.949352 ATCGGCATACAAAAATCTCTGATT 57.051 33.333 0.00 0.00 0.00 2.57
468 469 6.949352 AATCGGCATACAAAAATCTCTGAT 57.051 33.333 0.00 0.00 0.00 2.90
469 470 6.757897 AAATCGGCATACAAAAATCTCTGA 57.242 33.333 0.00 0.00 0.00 3.27
470 471 7.134815 CCTAAATCGGCATACAAAAATCTCTG 58.865 38.462 0.00 0.00 0.00 3.35
471 472 6.263168 CCCTAAATCGGCATACAAAAATCTCT 59.737 38.462 0.00 0.00 0.00 3.10
472 473 6.262273 TCCCTAAATCGGCATACAAAAATCTC 59.738 38.462 0.00 0.00 0.00 2.75
473 474 6.126409 TCCCTAAATCGGCATACAAAAATCT 58.874 36.000 0.00 0.00 0.00 2.40
474 475 6.385649 TCCCTAAATCGGCATACAAAAATC 57.614 37.500 0.00 0.00 0.00 2.17
475 476 6.976934 ATCCCTAAATCGGCATACAAAAAT 57.023 33.333 0.00 0.00 0.00 1.82
476 477 6.783708 AATCCCTAAATCGGCATACAAAAA 57.216 33.333 0.00 0.00 0.00 1.94
477 478 7.057894 ACTAATCCCTAAATCGGCATACAAAA 58.942 34.615 0.00 0.00 0.00 2.44
478 479 6.597562 ACTAATCCCTAAATCGGCATACAAA 58.402 36.000 0.00 0.00 0.00 2.83
479 480 6.182507 ACTAATCCCTAAATCGGCATACAA 57.817 37.500 0.00 0.00 0.00 2.41
480 481 5.818678 ACTAATCCCTAAATCGGCATACA 57.181 39.130 0.00 0.00 0.00 2.29
481 482 6.932947 ACTACTAATCCCTAAATCGGCATAC 58.067 40.000 0.00 0.00 0.00 2.39
482 483 8.834004 ATACTACTAATCCCTAAATCGGCATA 57.166 34.615 0.00 0.00 0.00 3.14
483 484 7.735326 ATACTACTAATCCCTAAATCGGCAT 57.265 36.000 0.00 0.00 0.00 4.40
484 485 8.111545 TCTATACTACTAATCCCTAAATCGGCA 58.888 37.037 0.00 0.00 0.00 5.69
485 486 8.517062 TCTATACTACTAATCCCTAAATCGGC 57.483 38.462 0.00 0.00 0.00 5.54
503 504 9.359653 AGGCAAATGCTAAATGAATTCTATACT 57.640 29.630 7.05 0.00 41.70 2.12
506 507 9.135189 TGTAGGCAAATGCTAAATGAATTCTAT 57.865 29.630 7.05 0.00 41.70 1.98
507 508 8.518430 TGTAGGCAAATGCTAAATGAATTCTA 57.482 30.769 7.05 0.00 41.70 2.10
508 509 7.408756 TGTAGGCAAATGCTAAATGAATTCT 57.591 32.000 7.05 0.00 41.70 2.40
509 510 7.761249 ACTTGTAGGCAAATGCTAAATGAATTC 59.239 33.333 5.25 0.00 41.70 2.17
510 511 7.614494 ACTTGTAGGCAAATGCTAAATGAATT 58.386 30.769 5.25 0.00 41.70 2.17
511 512 7.174107 ACTTGTAGGCAAATGCTAAATGAAT 57.826 32.000 5.25 0.00 41.70 2.57
512 513 6.588719 ACTTGTAGGCAAATGCTAAATGAA 57.411 33.333 5.25 0.00 41.70 2.57
513 514 6.588719 AACTTGTAGGCAAATGCTAAATGA 57.411 33.333 5.25 0.00 41.70 2.57
514 515 8.755696 TTAAACTTGTAGGCAAATGCTAAATG 57.244 30.769 5.25 0.00 41.70 2.32
515 516 8.034804 CCTTAAACTTGTAGGCAAATGCTAAAT 58.965 33.333 5.25 0.00 41.70 1.40
516 517 7.014808 ACCTTAAACTTGTAGGCAAATGCTAAA 59.985 33.333 5.25 0.00 41.70 1.85
517 518 6.492087 ACCTTAAACTTGTAGGCAAATGCTAA 59.508 34.615 5.25 0.00 41.70 3.09
518 519 6.007703 ACCTTAAACTTGTAGGCAAATGCTA 58.992 36.000 5.25 0.00 41.70 3.49
519 520 4.832823 ACCTTAAACTTGTAGGCAAATGCT 59.167 37.500 5.25 0.00 41.70 3.79
520 521 5.134202 ACCTTAAACTTGTAGGCAAATGC 57.866 39.130 0.00 0.00 41.14 3.56
521 522 6.983890 ACAAACCTTAAACTTGTAGGCAAATG 59.016 34.615 0.00 0.00 33.73 2.32
522 523 7.069455 AGACAAACCTTAAACTTGTAGGCAAAT 59.931 33.333 0.00 0.00 33.53 2.32
523 524 6.378848 AGACAAACCTTAAACTTGTAGGCAAA 59.621 34.615 0.00 0.00 33.53 3.68
524 525 5.889289 AGACAAACCTTAAACTTGTAGGCAA 59.111 36.000 0.00 0.00 33.53 4.52
525 526 5.442391 AGACAAACCTTAAACTTGTAGGCA 58.558 37.500 0.00 0.00 33.53 4.75
526 527 6.206498 CAAGACAAACCTTAAACTTGTAGGC 58.794 40.000 0.00 0.00 33.53 3.93
527 528 6.544564 TCCAAGACAAACCTTAAACTTGTAGG 59.455 38.462 0.00 0.00 33.53 3.18
528 529 7.562454 TCCAAGACAAACCTTAAACTTGTAG 57.438 36.000 0.00 0.00 33.53 2.74
529 530 6.038936 GCTCCAAGACAAACCTTAAACTTGTA 59.961 38.462 0.00 0.00 33.53 2.41
530 531 5.163550 GCTCCAAGACAAACCTTAAACTTGT 60.164 40.000 0.00 0.00 36.02 3.16
531 532 5.067805 AGCTCCAAGACAAACCTTAAACTTG 59.932 40.000 0.00 0.00 35.84 3.16
532 533 5.201243 AGCTCCAAGACAAACCTTAAACTT 58.799 37.500 0.00 0.00 0.00 2.66
533 534 4.793201 AGCTCCAAGACAAACCTTAAACT 58.207 39.130 0.00 0.00 0.00 2.66
534 535 5.515797 AAGCTCCAAGACAAACCTTAAAC 57.484 39.130 0.00 0.00 0.00 2.01
535 536 6.406512 GGAAAAGCTCCAAGACAAACCTTAAA 60.407 38.462 0.00 0.00 44.67 1.52
536 537 5.068591 GGAAAAGCTCCAAGACAAACCTTAA 59.931 40.000 0.00 0.00 44.67 1.85
537 538 4.583073 GGAAAAGCTCCAAGACAAACCTTA 59.417 41.667 0.00 0.00 44.67 2.69
538 539 3.384789 GGAAAAGCTCCAAGACAAACCTT 59.615 43.478 0.00 0.00 44.67 3.50
539 540 2.959030 GGAAAAGCTCCAAGACAAACCT 59.041 45.455 0.00 0.00 44.67 3.50
540 541 3.371102 GGAAAAGCTCCAAGACAAACC 57.629 47.619 0.00 0.00 44.67 3.27
554 555 2.035066 CCACTGCTTTGGTGAGGAAAAG 59.965 50.000 0.00 0.00 36.89 2.27
555 556 2.031120 CCACTGCTTTGGTGAGGAAAA 58.969 47.619 0.00 0.00 36.89 2.29
556 557 1.691196 CCACTGCTTTGGTGAGGAAA 58.309 50.000 0.00 0.00 36.89 3.13
557 558 0.823356 GCCACTGCTTTGGTGAGGAA 60.823 55.000 6.10 0.00 39.09 3.36
558 559 1.228245 GCCACTGCTTTGGTGAGGA 60.228 57.895 6.10 0.00 39.09 3.71
559 560 3.359002 GCCACTGCTTTGGTGAGG 58.641 61.111 6.10 0.00 39.09 3.86
569 570 1.817099 CTTGGGATCGAGCCACTGC 60.817 63.158 23.22 4.20 37.95 4.40
570 571 1.153289 CCTTGGGATCGAGCCACTG 60.153 63.158 23.22 9.93 0.00 3.66
571 572 3.036429 GCCTTGGGATCGAGCCACT 62.036 63.158 23.22 0.00 0.00 4.00
572 573 2.514824 GCCTTGGGATCGAGCCAC 60.515 66.667 23.22 11.58 0.00 5.01
573 574 2.377810 ATGCCTTGGGATCGAGCCA 61.378 57.895 23.22 4.78 0.00 4.75
574 575 1.895707 CATGCCTTGGGATCGAGCC 60.896 63.158 12.38 12.38 0.00 4.70
575 576 1.895707 CCATGCCTTGGGATCGAGC 60.896 63.158 0.00 0.00 42.33 5.03
576 577 1.895707 GCCATGCCTTGGGATCGAG 60.896 63.158 5.06 0.00 46.55 4.04
577 578 2.192979 GCCATGCCTTGGGATCGA 59.807 61.111 5.06 0.00 46.55 3.59
578 579 2.124193 TGCCATGCCTTGGGATCG 60.124 61.111 5.06 0.00 46.55 3.69
589 590 0.171679 TGCGAAAGAAGCATGCCATG 59.828 50.000 15.66 0.00 40.01 3.66
590 591 0.171903 GTGCGAAAGAAGCATGCCAT 59.828 50.000 15.66 3.12 46.96 4.40
591 592 1.580942 GTGCGAAAGAAGCATGCCA 59.419 52.632 15.66 0.00 46.96 4.92
592 593 1.153958 GGTGCGAAAGAAGCATGCC 60.154 57.895 15.66 0.00 46.96 4.40
593 594 0.179179 GAGGTGCGAAAGAAGCATGC 60.179 55.000 10.51 10.51 46.96 4.06
594 595 0.449388 GGAGGTGCGAAAGAAGCATG 59.551 55.000 0.00 0.00 46.96 4.06
595 596 0.326264 AGGAGGTGCGAAAGAAGCAT 59.674 50.000 0.00 0.00 46.96 3.79
596 597 0.108585 AAGGAGGTGCGAAAGAAGCA 59.891 50.000 0.00 0.00 40.48 3.91
597 598 0.799393 GAAGGAGGTGCGAAAGAAGC 59.201 55.000 0.00 0.00 37.43 3.86
598 599 1.443802 GGAAGGAGGTGCGAAAGAAG 58.556 55.000 0.00 0.00 0.00 2.85
599 600 0.036306 GGGAAGGAGGTGCGAAAGAA 59.964 55.000 0.00 0.00 0.00 2.52
600 601 1.677552 GGGAAGGAGGTGCGAAAGA 59.322 57.895 0.00 0.00 0.00 2.52
601 602 1.377333 GGGGAAGGAGGTGCGAAAG 60.377 63.158 0.00 0.00 0.00 2.62
602 603 2.754375 GGGGAAGGAGGTGCGAAA 59.246 61.111 0.00 0.00 0.00 3.46
603 604 3.327404 GGGGGAAGGAGGTGCGAA 61.327 66.667 0.00 0.00 0.00 4.70
604 605 4.332543 AGGGGGAAGGAGGTGCGA 62.333 66.667 0.00 0.00 0.00 5.10
605 606 3.787001 GAGGGGGAAGGAGGTGCG 61.787 72.222 0.00 0.00 0.00 5.34
606 607 3.787001 CGAGGGGGAAGGAGGTGC 61.787 72.222 0.00 0.00 0.00 5.01
607 608 3.083997 CCGAGGGGGAAGGAGGTG 61.084 72.222 0.00 0.00 38.47 4.00
610 611 3.787001 GTGCCGAGGGGGAAGGAG 61.787 72.222 0.00 0.00 38.47 3.69
617 618 4.323477 TTGAACGGTGCCGAGGGG 62.323 66.667 18.16 0.00 42.83 4.79
618 619 2.742372 CTTGAACGGTGCCGAGGG 60.742 66.667 18.16 0.00 42.83 4.30
619 620 3.423154 GCTTGAACGGTGCCGAGG 61.423 66.667 18.16 0.00 42.83 4.63
620 621 3.777925 CGCTTGAACGGTGCCGAG 61.778 66.667 18.16 5.21 42.83 4.63
621 622 3.583276 ATCGCTTGAACGGTGCCGA 62.583 57.895 18.16 0.00 42.83 5.54
622 623 2.677003 AATCGCTTGAACGGTGCCG 61.677 57.895 9.29 9.29 46.03 5.69
623 624 1.154225 CAATCGCTTGAACGGTGCC 60.154 57.895 0.00 0.00 34.04 5.01
624 625 0.447801 ATCAATCGCTTGAACGGTGC 59.552 50.000 5.70 0.00 44.29 5.01
625 626 2.002586 AGATCAATCGCTTGAACGGTG 58.997 47.619 5.70 0.00 44.29 4.94
626 627 2.093973 AGAGATCAATCGCTTGAACGGT 60.094 45.455 5.70 0.00 44.29 4.83
627 628 2.544685 AGAGATCAATCGCTTGAACGG 58.455 47.619 5.70 0.00 44.29 4.44
628 629 4.590400 AAAGAGATCAATCGCTTGAACG 57.410 40.909 5.70 0.00 44.38 3.95
629 630 7.688372 TCATTAAAGAGATCAATCGCTTGAAC 58.312 34.615 5.70 3.40 44.38 3.18
630 631 7.848223 TCATTAAAGAGATCAATCGCTTGAA 57.152 32.000 5.70 8.75 44.38 2.69
631 632 7.848223 TTCATTAAAGAGATCAATCGCTTGA 57.152 32.000 3.88 3.88 44.38 3.02
632 633 7.430502 GGTTTCATTAAAGAGATCAATCGCTTG 59.569 37.037 9.33 0.00 44.38 4.01
633 634 7.337942 AGGTTTCATTAAAGAGATCAATCGCTT 59.662 33.333 3.49 3.49 46.56 4.68
634 635 6.825721 AGGTTTCATTAAAGAGATCAATCGCT 59.174 34.615 0.00 0.00 38.63 4.93
635 636 6.909357 CAGGTTTCATTAAAGAGATCAATCGC 59.091 38.462 0.00 0.00 0.00 4.58
636 637 8.201554 TCAGGTTTCATTAAAGAGATCAATCG 57.798 34.615 0.00 0.00 0.00 3.34
650 651 8.062065 TCGCCTTAATAAAATCAGGTTTCATT 57.938 30.769 0.00 0.00 0.00 2.57
669 670 1.202568 TGATCGCAGATCAATCGCCTT 60.203 47.619 15.66 0.00 45.12 4.35
871 926 2.039624 AGACGGTGATCCCAGGCT 59.960 61.111 0.00 0.00 0.00 4.58
945 4240 1.007336 GGTGGTTCGTGTACGCAGAG 61.007 60.000 7.29 0.00 39.60 3.35
946 4241 1.007038 GGTGGTTCGTGTACGCAGA 60.007 57.895 7.29 2.21 39.60 4.26
965 4260 3.508012 GGACACTTCAGAGCTACTTCAGA 59.492 47.826 0.00 0.00 0.00 3.27
966 4261 3.256879 TGGACACTTCAGAGCTACTTCAG 59.743 47.826 0.00 0.00 0.00 3.02
967 4262 3.230976 TGGACACTTCAGAGCTACTTCA 58.769 45.455 0.00 0.00 0.00 3.02
968 4263 3.843999 CTGGACACTTCAGAGCTACTTC 58.156 50.000 0.00 0.00 34.36 3.01
979 4283 2.811317 CGCCGAGCTGGACACTTC 60.811 66.667 0.00 0.00 42.00 3.01
1090 4396 2.509336 GACGGACCGCTCATGGTG 60.509 66.667 15.39 0.00 44.01 4.17
1097 4403 4.057428 GCAGACTGACGGACCGCT 62.057 66.667 15.39 0.48 0.00 5.52
2016 5358 2.125269 ACGTATGCCGGAGTTGCC 60.125 61.111 5.05 0.00 42.24 4.52
2025 5367 2.860735 GAGTGACAATCAGACGTATGCC 59.139 50.000 5.03 0.00 0.00 4.40
2115 5460 4.096682 TCCCCACTTCTGTTTTTAACAACG 59.903 41.667 0.36 0.00 41.61 4.10
2136 5482 3.379372 TGCACTACGTATCTTACCACTCC 59.621 47.826 0.00 0.00 0.00 3.85
2207 5553 2.009774 CCTGTTATGGACTCAAAGGCG 58.990 52.381 0.00 0.00 0.00 5.52
2247 5593 4.365514 TTTGGGTGTATGACATGTGAGT 57.634 40.909 1.15 0.00 0.00 3.41
2249 5595 4.889995 TGTTTTTGGGTGTATGACATGTGA 59.110 37.500 1.15 0.00 0.00 3.58
2366 5740 4.020218 TCTCCGAATTCACAGTCCATCTTT 60.020 41.667 6.22 0.00 0.00 2.52
2438 5813 0.896019 CAGAGGACGGTGACCACTCT 60.896 60.000 12.86 12.86 38.96 3.24
2473 5848 9.349713 TCAAACACACCTTATATTTTGAGAAGT 57.650 29.630 0.00 0.00 31.21 3.01
2564 5939 1.816835 ACGACCAGAAACGATAGCTGA 59.183 47.619 0.00 0.00 42.67 4.26
2566 5941 2.731341 CGAACGACCAGAAACGATAGCT 60.731 50.000 0.00 0.00 42.67 3.32
2586 5961 1.818060 TGGGAGGCAATTTTGATGACG 59.182 47.619 0.00 0.00 0.00 4.35
2602 5977 6.211785 GGTGGGTAATTTTTGATAACTTGGGA 59.788 38.462 0.00 0.00 0.00 4.37
2603 5978 6.014156 TGGTGGGTAATTTTTGATAACTTGGG 60.014 38.462 0.00 0.00 0.00 4.12
2611 5986 4.622695 CGGCATTGGTGGGTAATTTTTGAT 60.623 41.667 0.00 0.00 0.00 2.57
2642 6017 9.662545 CCACTTAATTAAAATTGTTTTTGCCAG 57.337 29.630 0.00 0.00 35.82 4.85
2666 6041 1.664873 CAAACAGAATTGGCGGCCA 59.335 52.632 19.77 19.77 0.00 5.36
2700 6075 0.523072 CTTGTGGAAATGTGAGGGCG 59.477 55.000 0.00 0.00 0.00 6.13
2755 6130 2.111878 CCATGGTCTCCCCGATGC 59.888 66.667 2.57 0.00 35.15 3.91
2756 6131 0.255890 AAACCATGGTCTCCCCGATG 59.744 55.000 20.07 0.00 35.15 3.84
2759 6134 0.255890 ATCAAACCATGGTCTCCCCG 59.744 55.000 20.07 3.40 35.15 5.73
2760 6135 1.410224 GGATCAAACCATGGTCTCCCC 60.410 57.143 20.07 12.22 39.29 4.81
2794 6169 4.823989 TCAAGGAGAAAAGGCAGAGAAAAG 59.176 41.667 0.00 0.00 0.00 2.27
2798 6173 4.647564 ATTCAAGGAGAAAAGGCAGAGA 57.352 40.909 0.00 0.00 40.22 3.10
2799 6174 5.718724 AAATTCAAGGAGAAAAGGCAGAG 57.281 39.130 0.00 0.00 40.22 3.35
2829 6204 1.338337 GCGAGGCAGCTCTATCTTACA 59.662 52.381 0.00 0.00 0.00 2.41
2846 6221 4.254709 AACTGTGCTGCCAGGCGA 62.255 61.111 18.12 0.00 36.75 5.54
2847 6222 3.730761 GAACTGTGCTGCCAGGCG 61.731 66.667 18.12 2.69 36.75 5.52
2848 6223 1.530013 ATTGAACTGTGCTGCCAGGC 61.530 55.000 18.12 3.66 36.75 4.85
2849 6224 0.963962 AATTGAACTGTGCTGCCAGG 59.036 50.000 18.12 3.01 36.75 4.45
2850 6225 2.034939 TGAAATTGAACTGTGCTGCCAG 59.965 45.455 14.07 14.07 38.45 4.85
2851 6226 2.030371 TGAAATTGAACTGTGCTGCCA 58.970 42.857 0.00 0.00 0.00 4.92
2852 6227 2.669364 CTGAAATTGAACTGTGCTGCC 58.331 47.619 0.00 0.00 0.00 4.85
2853 6228 2.056577 GCTGAAATTGAACTGTGCTGC 58.943 47.619 0.00 0.00 0.00 5.25
2854 6229 2.608752 GGGCTGAAATTGAACTGTGCTG 60.609 50.000 0.00 0.00 0.00 4.41
2855 6230 1.615392 GGGCTGAAATTGAACTGTGCT 59.385 47.619 0.00 0.00 0.00 4.40
2856 6231 1.340889 TGGGCTGAAATTGAACTGTGC 59.659 47.619 0.00 0.00 0.00 4.57
2857 6232 2.608752 GCTGGGCTGAAATTGAACTGTG 60.609 50.000 0.00 0.00 0.00 3.66
2858 6233 1.615392 GCTGGGCTGAAATTGAACTGT 59.385 47.619 0.00 0.00 0.00 3.55
2859 6234 1.891150 AGCTGGGCTGAAATTGAACTG 59.109 47.619 0.00 0.00 37.57 3.16
2860 6235 2.299326 AGCTGGGCTGAAATTGAACT 57.701 45.000 0.00 0.00 37.57 3.01
2861 6236 4.725790 AATAGCTGGGCTGAAATTGAAC 57.274 40.909 0.00 0.00 40.10 3.18
2862 6237 5.743636 AAAATAGCTGGGCTGAAATTGAA 57.256 34.783 0.00 0.00 40.10 2.69
2863 6238 5.743636 AAAAATAGCTGGGCTGAAATTGA 57.256 34.783 0.00 0.00 40.10 2.57
2882 6257 5.427036 AAAGTACTTGAATCCGCGAAAAA 57.573 34.783 8.23 0.00 0.00 1.94
2883 6258 5.007823 TCAAAAGTACTTGAATCCGCGAAAA 59.992 36.000 8.23 0.00 32.39 2.29
2884 6259 4.512198 TCAAAAGTACTTGAATCCGCGAAA 59.488 37.500 8.23 0.00 32.39 3.46
2885 6260 4.059511 TCAAAAGTACTTGAATCCGCGAA 58.940 39.130 8.23 0.00 32.39 4.70
2886 6261 3.655486 TCAAAAGTACTTGAATCCGCGA 58.345 40.909 8.23 0.00 32.39 5.87
2887 6262 4.084013 ACTTCAAAAGTACTTGAATCCGCG 60.084 41.667 9.34 0.00 42.78 6.46
2888 6263 5.358298 ACTTCAAAAGTACTTGAATCCGC 57.642 39.130 9.34 0.00 42.78 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.