Multiple sequence alignment - TraesCS7A01G545100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G545100 chr7A 100.000 3543 0 0 1 3543 721203810 721207352 0.000000e+00 6543.0
1 TraesCS7A01G545100 chr7A 96.957 230 7 0 3314 3543 721212086 721212315 1.540000e-103 387.0
2 TraesCS7A01G545100 chr7A 96.522 230 8 0 3314 3543 30323902 30324131 7.180000e-102 381.0
3 TraesCS7A01G545100 chr7A 95.339 236 9 1 511 746 721181371 721181604 1.200000e-99 374.0
4 TraesCS7A01G545100 chr7A 95.671 231 10 0 3313 3543 30318962 30319192 4.320000e-99 372.0
5 TraesCS7A01G545100 chr7A 80.357 280 27 14 92 356 721177887 721178153 1.680000e-43 187.0
6 TraesCS7A01G545100 chr7A 76.856 229 47 6 2165 2390 721223172 721223397 1.340000e-24 124.0
7 TraesCS7A01G545100 chr7A 85.185 108 11 3 415 521 721179168 721179271 4.840000e-19 106.0
8 TraesCS7A01G545100 chr7A 92.157 51 4 0 747 797 230602652 230602702 4.910000e-09 73.1
9 TraesCS7A01G545100 chr7D 92.514 1269 70 11 2053 3314 625611321 625612571 0.000000e+00 1794.0
10 TraesCS7A01G545100 chr7D 92.611 609 40 4 848 1455 625610179 625610783 0.000000e+00 870.0
11 TraesCS7A01G545100 chr7D 84.127 504 33 18 1548 2017 625610836 625611326 9.030000e-121 444.0
12 TraesCS7A01G545100 chr7D 92.093 215 16 1 533 746 625609856 625610070 5.750000e-78 302.0
13 TraesCS7A01G545100 chr7D 96.104 77 3 0 1377 1453 625650956 625651032 3.710000e-25 126.0
14 TraesCS7A01G545100 chr7D 92.135 89 4 2 1365 1453 625855258 625855173 4.800000e-24 122.0
15 TraesCS7A01G545100 chr7D 96.774 62 2 0 2327 2388 625651582 625651643 1.740000e-18 104.0
16 TraesCS7A01G545100 chr7D 95.652 46 2 0 747 792 566094411 566094456 1.360000e-09 75.0
17 TraesCS7A01G545100 chr7D 97.619 42 1 0 747 788 105651370 105651411 4.910000e-09 73.1
18 TraesCS7A01G545100 chr7D 92.308 52 3 1 3 53 399549294 399549345 4.910000e-09 73.1
19 TraesCS7A01G545100 chr7B 86.928 1071 86 20 1551 2580 725185554 725184497 0.000000e+00 1153.0
20 TraesCS7A01G545100 chr7B 89.706 680 46 10 849 1525 725186323 725185665 0.000000e+00 846.0
21 TraesCS7A01G545100 chr7B 91.050 581 42 3 874 1453 682379208 682378637 0.000000e+00 776.0
22 TraesCS7A01G545100 chr7B 83.448 580 72 13 2125 2690 682378060 682377491 5.240000e-143 518.0
23 TraesCS7A01G545100 chr7B 89.402 368 37 1 2716 3081 725184453 725184086 2.490000e-126 462.0
24 TraesCS7A01G545100 chr7B 77.555 548 71 22 2708 3241 682376138 682375629 2.080000e-72 283.0
25 TraesCS7A01G545100 chr7B 91.061 179 10 3 874 1052 682382064 682381892 1.640000e-58 237.0
26 TraesCS7A01G545100 chr7B 91.358 162 11 2 584 744 725187897 725187738 5.960000e-53 219.0
27 TraesCS7A01G545100 chr7B 85.581 215 21 2 533 746 682382398 682382193 2.140000e-52 217.0
28 TraesCS7A01G545100 chr7B 80.936 299 20 14 848 1137 725187573 725187303 6.000000e-48 202.0
29 TraesCS7A01G545100 chr7B 80.420 286 33 11 1734 2007 682378346 682378072 2.790000e-46 196.0
30 TraesCS7A01G545100 chr7B 94.444 126 7 0 621 746 682379458 682379333 1.000000e-45 195.0
31 TraesCS7A01G545100 chr7B 90.972 144 11 2 594 737 725186573 725186432 3.610000e-45 193.0
32 TraesCS7A01G545100 chr7B 90.210 143 12 2 594 736 725195553 725195413 6.040000e-43 185.0
33 TraesCS7A01G545100 chr7B 97.222 108 3 0 1567 1674 682378468 682378361 2.170000e-42 183.0
34 TraesCS7A01G545100 chr7B 94.253 87 5 0 1367 1453 725605224 725605310 2.220000e-27 134.0
35 TraesCS7A01G545100 chr7B 94.253 87 5 0 1367 1453 725640819 725640905 2.220000e-27 134.0
36 TraesCS7A01G545100 chr7B 94.805 77 4 0 1377 1453 16833691 16833767 1.730000e-23 121.0
37 TraesCS7A01G545100 chr7B 76.496 234 39 10 2165 2390 725605550 725605775 2.890000e-21 113.0
38 TraesCS7A01G545100 chr7B 76.496 234 39 10 2165 2390 725641145 725641370 2.890000e-21 113.0
39 TraesCS7A01G545100 chr7B 85.714 105 11 3 3008 3112 725181445 725181345 1.340000e-19 108.0
40 TraesCS7A01G545100 chr7B 98.305 59 1 0 786 844 682379322 682379264 1.740000e-18 104.0
41 TraesCS7A01G545100 chr7B 94.030 67 3 1 2325 2390 682355101 682355035 2.250000e-17 100.0
42 TraesCS7A01G545100 chr7B 96.610 59 2 0 786 844 682382183 682382125 8.090000e-17 99.0
43 TraesCS7A01G545100 chr7B 96.364 55 2 0 790 844 725189988 725189934 1.350000e-14 91.6
44 TraesCS7A01G545100 chr7B 76.812 207 15 19 326 521 682381435 682381251 6.300000e-13 86.1
45 TraesCS7A01G545100 chr7B 95.652 46 1 1 747 792 453305696 453305740 4.910000e-09 73.1
46 TraesCS7A01G545100 chr7B 97.368 38 1 0 803 840 725186395 725186358 8.210000e-07 65.8
47 TraesCS7A01G545100 chrUn 88.923 659 41 12 874 1525 87746631 87747264 0.000000e+00 784.0
48 TraesCS7A01G545100 chrUn 82.005 728 83 29 2110 2809 87747845 87748552 3.070000e-160 575.0
49 TraesCS7A01G545100 chrUn 85.477 482 43 13 1548 2007 87747372 87747848 8.900000e-131 477.0
50 TraesCS7A01G545100 chrUn 94.253 87 5 0 1367 1453 332189883 332189797 2.220000e-27 134.0
51 TraesCS7A01G545100 chrUn 76.496 234 39 10 2165 2390 332189557 332189332 2.890000e-21 113.0
52 TraesCS7A01G545100 chrUn 98.305 59 1 0 786 844 87746508 87746566 1.740000e-18 104.0
53 TraesCS7A01G545100 chr1A 96.522 230 8 0 3314 3543 477416471 477416700 7.180000e-102 381.0
54 TraesCS7A01G545100 chr1A 96.522 230 7 1 3314 3543 477411540 477411768 2.580000e-101 379.0
55 TraesCS7A01G545100 chr5A 94.783 230 12 0 3314 3543 705564736 705564965 3.360000e-95 359.0
56 TraesCS7A01G545100 chr5A 97.727 44 1 0 746 789 474578174 474578217 3.790000e-10 76.8
57 TraesCS7A01G545100 chr5A 92.308 52 3 1 3 53 323991669 323991720 4.910000e-09 73.1
58 TraesCS7A01G545100 chr3A 93.913 230 14 0 3314 3543 461154164 461153935 7.280000e-92 348.0
59 TraesCS7A01G545100 chr3A 91.304 230 20 0 3314 3543 461159139 461158910 7.380000e-82 315.0
60 TraesCS7A01G545100 chr6A 91.561 237 12 1 3315 3543 587819899 587820135 1.590000e-83 320.0
61 TraesCS7A01G545100 chr6A 85.000 160 17 4 848 1005 74383967 74383813 4.740000e-34 156.0
62 TraesCS7A01G545100 chr6B 94.231 52 3 0 747 798 5553722 5553773 2.930000e-11 80.5
63 TraesCS7A01G545100 chr6D 100.000 42 0 0 747 788 422636708 422636749 1.050000e-10 78.7
64 TraesCS7A01G545100 chr6D 90.385 52 4 1 3 53 256557531 256557582 2.280000e-07 67.6
65 TraesCS7A01G545100 chr3B 94.000 50 1 2 747 795 572843854 572843806 1.360000e-09 75.0
66 TraesCS7A01G545100 chr2B 93.878 49 1 2 7 53 796555023 796554975 4.910000e-09 73.1
67 TraesCS7A01G545100 chr5D 95.349 43 1 1 12 53 64540775 64540733 2.280000e-07 67.6
68 TraesCS7A01G545100 chr5B 86.885 61 6 2 728 787 209635182 209635241 2.280000e-07 67.6
69 TraesCS7A01G545100 chr4D 90.385 52 4 1 3 53 116924456 116924507 2.280000e-07 67.6
70 TraesCS7A01G545100 chr4D 95.349 43 1 1 12 53 132278815 132278773 2.280000e-07 67.6
71 TraesCS7A01G545100 chr3D 95.349 43 1 1 12 53 125046638 125046596 2.280000e-07 67.6
72 TraesCS7A01G545100 chr1D 95.349 43 1 1 12 53 310947331 310947289 2.280000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G545100 chr7A 721203810 721207352 3542 False 6543.000000 6543 100.000000 1 3543 1 chr7A.!!$F4 3542
1 TraesCS7A01G545100 chr7A 721177887 721181604 3717 False 222.333333 374 86.960333 92 746 3 chr7A.!!$F7 654
2 TraesCS7A01G545100 chr7D 625609856 625612571 2715 False 852.500000 1794 90.336250 533 3314 4 chr7D.!!$F4 2781
3 TraesCS7A01G545100 chr7B 725181345 725189988 8643 True 371.155556 1153 89.860889 584 3112 9 chr7B.!!$R4 2528
4 TraesCS7A01G545100 chr7B 682375629 682382398 6769 True 263.100000 776 88.409818 326 3241 11 chr7B.!!$R3 2915
5 TraesCS7A01G545100 chrUn 87746508 87748552 2044 False 485.000000 784 88.677500 786 2809 4 chrUn.!!$F1 2023

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 303 0.040646 TCGCAGGAAAGAGGAGGGTA 59.959 55.0 0.00 0.0 0.00 3.69 F
356 371 0.103572 ACGGCGTAGACACACAAGTT 59.896 50.0 12.58 0.0 27.25 2.66 F
1919 11205 0.034059 CTGGTGTCTCTCTTGGCGTT 59.966 55.0 0.00 0.0 0.00 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 11186 0.034059 AACGCCAAGAGAGACACCAG 59.966 55.0 0.00 0.0 0.00 4.00 R
2090 11381 0.035152 ATGCCCGCATCACTCTGAAA 60.035 50.0 0.00 0.0 29.42 2.69 R
3349 14036 0.035036 CAGATGCGCCTCATGGAGAT 59.965 55.0 15.26 0.0 35.05 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.519799 TTTTTCTCAAGTGATGACTTAAGGTT 57.480 30.769 7.53 0.00 40.68 3.50
33 34 9.621629 TTTTCTCAAGTGATGACTTAAGGTTTA 57.378 29.630 7.53 0.00 40.68 2.01
36 37 8.593679 TCTCAAGTGATGACTTAAGGTTTATCA 58.406 33.333 7.53 8.01 40.68 2.15
38 39 9.739276 TCAAGTGATGACTTAAGGTTTATCAAT 57.261 29.630 7.53 7.38 40.68 2.57
39 40 9.994432 CAAGTGATGACTTAAGGTTTATCAATC 57.006 33.333 7.53 2.60 40.68 2.67
40 41 8.738645 AGTGATGACTTAAGGTTTATCAATCC 57.261 34.615 7.53 1.01 35.32 3.01
41 42 8.552296 AGTGATGACTTAAGGTTTATCAATCCT 58.448 33.333 7.53 2.95 35.32 3.24
42 43 9.178758 GTGATGACTTAAGGTTTATCAATCCTT 57.821 33.333 7.53 6.52 43.02 3.36
43 44 9.177608 TGATGACTTAAGGTTTATCAATCCTTG 57.822 33.333 7.53 0.30 41.04 3.61
46 47 8.602424 TGACTTAAGGTTTATCAATCCTTGAGA 58.398 33.333 19.45 4.04 43.20 3.27
47 48 9.103861 GACTTAAGGTTTATCAATCCTTGAGAG 57.896 37.037 19.45 12.80 43.20 3.20
49 50 6.394345 AAGGTTTATCAATCCTTGAGAGGT 57.606 37.500 1.38 0.00 43.98 3.85
50 51 5.749462 AGGTTTATCAATCCTTGAGAGGTG 58.251 41.667 0.00 0.00 43.98 4.00
51 52 5.251700 AGGTTTATCAATCCTTGAGAGGTGT 59.748 40.000 0.00 0.00 43.98 4.16
53 54 6.539103 GGTTTATCAATCCTTGAGAGGTGTAC 59.461 42.308 0.00 0.00 43.98 2.90
54 55 4.762289 ATCAATCCTTGAGAGGTGTACC 57.238 45.455 0.00 0.00 43.98 3.34
55 56 3.791320 TCAATCCTTGAGAGGTGTACCT 58.209 45.455 2.58 2.58 43.97 3.08
58 59 6.103902 TCAATCCTTGAGAGGTGTACCTAGG 61.104 48.000 7.41 7.41 43.97 3.02
63 64 2.371453 AGGTGTACCTAGGGCCCC 59.629 66.667 21.43 1.37 46.48 5.80
65 66 2.070650 GGTGTACCTAGGGCCCCTG 61.071 68.421 21.43 11.89 34.61 4.45
66 67 1.002533 GTGTACCTAGGGCCCCTGA 59.997 63.158 21.43 2.67 34.61 3.86
67 68 0.619543 GTGTACCTAGGGCCCCTGAA 60.620 60.000 21.43 0.00 34.61 3.02
68 69 0.345502 TGTACCTAGGGCCCCTGAAT 59.654 55.000 21.43 0.62 34.61 2.57
69 70 0.765510 GTACCTAGGGCCCCTGAATG 59.234 60.000 21.43 3.75 34.61 2.67
70 71 1.060163 TACCTAGGGCCCCTGAATGC 61.060 60.000 21.43 0.00 34.61 3.56
71 72 2.386100 CCTAGGGCCCCTGAATGCA 61.386 63.158 21.43 0.00 34.61 3.96
75 76 1.152881 GGGCCCCTGAATGCAGTAG 60.153 63.158 12.23 0.00 40.63 2.57
76 77 1.152881 GGCCCCTGAATGCAGTAGG 60.153 63.158 0.00 1.10 40.63 3.18
79 80 1.609239 CCCTGAATGCAGTAGGCCA 59.391 57.895 5.01 0.00 43.89 5.36
80 81 0.465097 CCCTGAATGCAGTAGGCCAG 60.465 60.000 5.01 1.54 43.89 4.85
81 82 0.254178 CCTGAATGCAGTAGGCCAGT 59.746 55.000 5.01 0.00 43.89 4.00
82 83 1.486310 CCTGAATGCAGTAGGCCAGTA 59.514 52.381 5.01 0.00 43.89 2.74
83 84 2.484417 CCTGAATGCAGTAGGCCAGTAG 60.484 54.545 5.01 0.00 43.89 2.57
84 85 1.134401 TGAATGCAGTAGGCCAGTAGC 60.134 52.381 5.01 4.15 43.89 3.58
95 96 1.685224 CCAGTAGCCAAGCTCCCAA 59.315 57.895 0.00 0.00 40.44 4.12
110 111 1.152777 CCAAGTGAACACCCAGCCA 60.153 57.895 1.11 0.00 0.00 4.75
136 137 2.401195 GCAAGAAGATGCCGCGAC 59.599 61.111 8.23 0.00 40.49 5.19
138 139 2.509336 AAGAAGATGCCGCGACCG 60.509 61.111 8.23 0.00 0.00 4.79
144 145 4.444838 ATGCCGCGACCGCAAGTA 62.445 61.111 8.23 5.06 42.06 2.24
145 146 3.943479 ATGCCGCGACCGCAAGTAA 62.943 57.895 8.23 0.00 42.06 2.24
146 147 3.849953 GCCGCGACCGCAAGTAAG 61.850 66.667 8.23 0.00 42.06 2.34
147 148 3.186047 CCGCGACCGCAAGTAAGG 61.186 66.667 8.23 2.50 42.06 2.69
148 149 3.186047 CGCGACCGCAAGTAAGGG 61.186 66.667 14.91 0.00 42.06 3.95
165 166 2.748388 AGGGCGTAGAGGAGTACAATT 58.252 47.619 0.00 0.00 0.00 2.32
201 203 1.451387 GCCATGGTCGTCGGGATTT 60.451 57.895 14.67 0.00 0.00 2.17
209 211 1.684983 GTCGTCGGGATTTAGATGGGA 59.315 52.381 0.00 0.00 0.00 4.37
210 212 1.684983 TCGTCGGGATTTAGATGGGAC 59.315 52.381 0.00 0.00 0.00 4.46
211 213 1.602165 CGTCGGGATTTAGATGGGACG 60.602 57.143 0.00 0.00 39.57 4.79
241 250 1.701847 CTGATATGGAGGGGAGGGTTG 59.298 57.143 0.00 0.00 0.00 3.77
243 252 0.653397 ATATGGAGGGGAGGGTTGGA 59.347 55.000 0.00 0.00 0.00 3.53
254 269 0.193574 AGGGTTGGAGGAGAAGGTGA 59.806 55.000 0.00 0.00 0.00 4.02
286 301 0.972983 TCTCGCAGGAAAGAGGAGGG 60.973 60.000 0.00 0.00 35.34 4.30
287 302 1.229209 TCGCAGGAAAGAGGAGGGT 60.229 57.895 0.00 0.00 0.00 4.34
288 303 0.040646 TCGCAGGAAAGAGGAGGGTA 59.959 55.000 0.00 0.00 0.00 3.69
289 304 0.902531 CGCAGGAAAGAGGAGGGTAA 59.097 55.000 0.00 0.00 0.00 2.85
297 312 4.354662 GAAAGAGGAGGGTAAGGAGAAGA 58.645 47.826 0.00 0.00 0.00 2.87
298 313 4.635558 AAGAGGAGGGTAAGGAGAAGAT 57.364 45.455 0.00 0.00 0.00 2.40
312 327 0.902531 GAAGATGGAACCTCCCGTCA 59.097 55.000 0.00 0.00 43.15 4.35
319 334 0.741221 GAACCTCCCGTCATCAGTGC 60.741 60.000 0.00 0.00 0.00 4.40
320 335 2.185310 AACCTCCCGTCATCAGTGCC 62.185 60.000 0.00 0.00 0.00 5.01
323 338 4.457496 CCCGTCATCAGTGCCGCT 62.457 66.667 0.00 0.00 0.00 5.52
324 339 2.494445 CCGTCATCAGTGCCGCTA 59.506 61.111 0.00 0.00 0.00 4.26
356 371 0.103572 ACGGCGTAGACACACAAGTT 59.896 50.000 12.58 0.00 27.25 2.66
357 372 1.214367 CGGCGTAGACACACAAGTTT 58.786 50.000 0.00 0.00 27.25 2.66
359 374 2.348218 CGGCGTAGACACACAAGTTTTC 60.348 50.000 0.00 0.00 27.25 2.29
361 376 3.059800 GGCGTAGACACACAAGTTTTCTC 60.060 47.826 0.00 0.00 31.66 2.87
362 377 3.059800 GCGTAGACACACAAGTTTTCTCC 60.060 47.826 0.00 0.00 0.00 3.71
365 380 5.629849 CGTAGACACACAAGTTTTCTCCTAG 59.370 44.000 0.00 0.00 0.00 3.02
366 381 5.871396 AGACACACAAGTTTTCTCCTAGA 57.129 39.130 0.00 0.00 0.00 2.43
370 385 7.451877 AGACACACAAGTTTTCTCCTAGAGATA 59.548 37.037 0.00 0.00 38.56 1.98
371 386 7.379750 ACACACAAGTTTTCTCCTAGAGATAC 58.620 38.462 0.00 0.00 38.56 2.24
373 388 7.543868 CACACAAGTTTTCTCCTAGAGATACAG 59.456 40.741 0.00 0.00 38.56 2.74
375 390 7.543868 CACAAGTTTTCTCCTAGAGATACAGTG 59.456 40.741 0.00 6.79 38.56 3.66
377 392 5.955355 AGTTTTCTCCTAGAGATACAGTGCT 59.045 40.000 0.00 0.00 38.56 4.40
378 393 6.096282 AGTTTTCTCCTAGAGATACAGTGCTC 59.904 42.308 0.00 0.00 38.56 4.26
384 1343 1.118838 GAGATACAGTGCTCCAGGCT 58.881 55.000 0.00 0.00 42.39 4.58
386 1345 1.118838 GATACAGTGCTCCAGGCTCT 58.881 55.000 0.00 0.00 44.38 4.09
396 1355 1.591059 CCAGGCTCTCTGAATCGCG 60.591 63.158 0.00 0.00 46.18 5.87
397 1356 2.105930 AGGCTCTCTGAATCGCGC 59.894 61.111 0.00 0.00 0.00 6.86
399 1358 3.326210 GCTCTCTGAATCGCGCCG 61.326 66.667 0.00 0.00 0.00 6.46
402 1361 3.257561 CTCTGAATCGCGCCGGTG 61.258 66.667 11.67 11.67 0.00 4.94
424 1395 2.738521 CGCGGATCGGCCCAATAG 60.739 66.667 18.48 0.84 33.78 1.73
454 1425 2.876645 GGCTCGTTCGTCTGCTCG 60.877 66.667 0.00 0.00 0.00 5.03
455 1426 3.537297 GCTCGTTCGTCTGCTCGC 61.537 66.667 0.00 0.00 0.00 5.03
456 1427 2.177038 CTCGTTCGTCTGCTCGCT 59.823 61.111 0.00 0.00 0.00 4.93
457 1428 1.865622 CTCGTTCGTCTGCTCGCTC 60.866 63.158 0.00 0.00 0.00 5.03
460 1431 1.729838 GTTCGTCTGCTCGCTCGTT 60.730 57.895 0.00 0.00 0.00 3.85
473 1444 1.057847 CGCTCGTTCGTCACTGATTTC 59.942 52.381 0.00 0.00 0.00 2.17
476 1447 2.581637 TCGTTCGTCACTGATTTCGAG 58.418 47.619 0.00 0.00 33.98 4.04
478 1449 2.977829 CGTTCGTCACTGATTTCGAGAA 59.022 45.455 0.00 0.00 33.98 2.87
489 1460 7.012327 TCACTGATTTCGAGAAAGTTCACAAAT 59.988 33.333 4.54 0.00 33.32 2.32
536 1690 9.928236 TTTTGAATTCATTGGTTTTTCGAAATC 57.072 25.926 12.12 8.10 29.22 2.17
545 1699 2.519002 TTTTCGAAATCGGTCATGCG 57.481 45.000 12.12 0.00 40.29 4.73
546 1700 0.724549 TTTCGAAATCGGTCATGCGG 59.275 50.000 6.47 0.00 40.29 5.69
547 1701 0.108567 TTCGAAATCGGTCATGCGGA 60.109 50.000 0.00 0.00 40.29 5.54
549 1703 0.508641 CGAAATCGGTCATGCGGATC 59.491 55.000 9.45 0.00 36.33 3.36
554 1708 2.663188 GGTCATGCGGATCGAGCC 60.663 66.667 10.41 10.41 0.00 4.70
556 1710 1.953138 GTCATGCGGATCGAGCCAG 60.953 63.158 21.44 13.51 0.00 4.85
557 1711 3.344215 CATGCGGATCGAGCCAGC 61.344 66.667 21.44 22.58 0.00 4.85
558 1712 4.615815 ATGCGGATCGAGCCAGCC 62.616 66.667 25.76 12.96 0.00 4.85
562 1716 4.899239 GGATCGAGCCAGCCACGG 62.899 72.222 16.44 0.00 0.00 4.94
563 1717 4.148825 GATCGAGCCAGCCACGGT 62.149 66.667 0.00 0.48 0.00 4.83
564 1718 4.148825 ATCGAGCCAGCCACGGTC 62.149 66.667 0.00 0.00 0.00 4.79
566 1720 4.457496 CGAGCCAGCCACGGTCAT 62.457 66.667 0.00 0.00 0.00 3.06
567 1721 2.512515 GAGCCAGCCACGGTCATC 60.513 66.667 0.00 0.00 0.00 2.92
568 1722 4.101448 AGCCAGCCACGGTCATCC 62.101 66.667 0.00 0.00 0.00 3.51
572 1726 2.607750 AGCCACGGTCATCCACCT 60.608 61.111 0.00 0.00 44.21 4.00
573 1727 2.125106 GCCACGGTCATCCACCTC 60.125 66.667 0.00 0.00 44.21 3.85
574 1728 2.184322 CCACGGTCATCCACCTCG 59.816 66.667 0.00 0.00 44.21 4.63
575 1729 2.184322 CACGGTCATCCACCTCGG 59.816 66.667 0.00 0.00 44.21 4.63
576 1730 3.075005 ACGGTCATCCACCTCGGG 61.075 66.667 0.00 0.00 44.21 5.14
577 1731 4.530857 CGGTCATCCACCTCGGGC 62.531 72.222 0.00 0.00 44.21 6.13
578 1732 3.399181 GGTCATCCACCTCGGGCA 61.399 66.667 0.00 0.00 42.84 5.36
579 1733 2.187946 GTCATCCACCTCGGGCAG 59.812 66.667 0.00 0.00 34.36 4.85
599 5538 4.804261 GCAGGACATGTTCAGGACTACTTT 60.804 45.833 6.96 0.00 0.00 2.66
707 5646 2.552315 AGTGCAAGGTTAACGTTGGATG 59.448 45.455 31.30 15.40 42.29 3.51
730 5669 3.375922 GGACAAGAAAAGACGTGGTTTCA 59.624 43.478 18.05 0.00 36.41 2.69
746 5685 7.227910 ACGTGGTTTCACTTCTGTTATTGTTAT 59.772 33.333 0.00 0.00 41.53 1.89
766 5705 9.747898 TTGTTATAATACAAAGTTGGGTCATCT 57.252 29.630 0.00 0.00 35.22 2.90
776 5715 7.926018 ACAAAGTTGGGTCATCTATTTTGAAAC 59.074 33.333 0.00 0.00 0.00 2.78
777 5716 6.254281 AGTTGGGTCATCTATTTTGAAACG 57.746 37.500 0.00 0.00 0.00 3.60
778 5717 6.001460 AGTTGGGTCATCTATTTTGAAACGA 58.999 36.000 0.00 0.00 0.00 3.85
779 5718 6.488683 AGTTGGGTCATCTATTTTGAAACGAA 59.511 34.615 0.00 0.00 0.00 3.85
780 5719 6.494893 TGGGTCATCTATTTTGAAACGAAG 57.505 37.500 0.00 0.00 0.00 3.79
781 5720 5.414454 TGGGTCATCTATTTTGAAACGAAGG 59.586 40.000 0.00 0.00 0.00 3.46
782 5721 5.163652 GGGTCATCTATTTTGAAACGAAGGG 60.164 44.000 0.00 0.00 0.00 3.95
783 5722 5.646360 GGTCATCTATTTTGAAACGAAGGGA 59.354 40.000 0.00 0.00 0.00 4.20
784 5723 6.183360 GGTCATCTATTTTGAAACGAAGGGAG 60.183 42.308 0.00 0.00 0.00 4.30
844 5810 2.158871 TCGAATAAATAGGCGCCCAAGT 60.159 45.455 26.15 8.44 0.00 3.16
846 5812 4.000988 CGAATAAATAGGCGCCCAAGTAT 58.999 43.478 26.15 11.85 0.00 2.12
863 5872 7.320399 CCCAAGTATAACTTCATTTGGAAACC 58.680 38.462 2.80 0.00 36.03 3.27
869 5878 3.500343 ACTTCATTTGGAAACCCTCCTG 58.500 45.455 0.00 0.00 45.64 3.86
965 10071 2.366916 GGAGGAGAACACATCGATCCAT 59.633 50.000 0.00 0.00 32.33 3.41
1106 10216 4.740268 TGCAGGTAAGTGTCTATACAACG 58.260 43.478 0.00 0.00 37.36 4.10
1125 10235 3.314083 GATCCTGGATCCTTTCGGC 57.686 57.895 23.45 0.00 33.37 5.54
1145 10255 1.068895 CTCCGATCTGCTTCATGCTCT 59.931 52.381 0.00 0.00 43.37 4.09
1264 10377 2.131709 TGATCGATCGGGTGGGACC 61.132 63.158 20.03 0.00 37.60 4.46
1312 10425 3.188159 ACTTACACGCTTGTTCCTTCA 57.812 42.857 0.00 0.00 37.15 3.02
1444 10557 2.590092 GGCCACCGCTACCTTGAT 59.410 61.111 0.00 0.00 34.44 2.57
1458 10571 5.648092 GCTACCTTGATGTCAGGTAAACATT 59.352 40.000 0.67 0.00 37.47 2.71
1459 10572 6.151144 GCTACCTTGATGTCAGGTAAACATTT 59.849 38.462 0.67 0.00 37.47 2.32
1461 10574 9.226606 CTACCTTGATGTCAGGTAAACATTTTA 57.773 33.333 0.67 0.00 37.47 1.52
1467 10580 6.067263 TGTCAGGTAAACATTTTAGCACAC 57.933 37.500 9.77 6.50 0.00 3.82
1470 10583 5.049954 TCAGGTAAACATTTTAGCACACGAC 60.050 40.000 9.77 0.00 0.00 4.34
1472 10585 4.084433 GGTAAACATTTTAGCACACGACGA 60.084 41.667 0.00 0.00 0.00 4.20
1479 10592 1.784036 TAGCACACGACGACGAACCA 61.784 55.000 15.32 0.00 42.66 3.67
1520 10637 1.767681 CTTAATCCTCTGCCTCTGCCT 59.232 52.381 0.00 0.00 36.33 4.75
1521 10638 1.885049 TAATCCTCTGCCTCTGCCTT 58.115 50.000 0.00 0.00 36.33 4.35
1522 10639 0.998145 AATCCTCTGCCTCTGCCTTT 59.002 50.000 0.00 0.00 36.33 3.11
1523 10640 0.255318 ATCCTCTGCCTCTGCCTTTG 59.745 55.000 0.00 0.00 36.33 2.77
1526 10643 1.584380 CTCTGCCTCTGCCTTTGCAC 61.584 60.000 0.00 0.00 44.23 4.57
1527 10644 1.602888 CTGCCTCTGCCTTTGCACT 60.603 57.895 0.00 0.00 44.23 4.40
1528 10645 1.152694 TGCCTCTGCCTTTGCACTT 60.153 52.632 0.00 0.00 44.23 3.16
1529 10646 0.756442 TGCCTCTGCCTTTGCACTTT 60.756 50.000 0.00 0.00 44.23 2.66
1530 10647 0.319297 GCCTCTGCCTTTGCACTTTG 60.319 55.000 0.00 0.00 44.23 2.77
1531 10648 0.316204 CCTCTGCCTTTGCACTTTGG 59.684 55.000 0.00 0.00 44.23 3.28
1532 10649 1.321474 CTCTGCCTTTGCACTTTGGA 58.679 50.000 0.00 0.00 44.23 3.53
1533 10650 1.000938 CTCTGCCTTTGCACTTTGGAC 60.001 52.381 0.00 0.00 44.23 4.02
1534 10651 1.035139 CTGCCTTTGCACTTTGGACT 58.965 50.000 0.00 0.00 44.23 3.85
1535 10652 1.000938 CTGCCTTTGCACTTTGGACTC 60.001 52.381 0.00 0.00 44.23 3.36
1565 10788 2.332063 ATTGCATCGATCGGAAACCT 57.668 45.000 16.41 0.00 0.00 3.50
1674 10920 2.361789 GCACCGGCTCAGGTAATTAAA 58.638 47.619 0.00 0.00 43.89 1.52
1726 10991 9.050601 CCCTCTTGTGATCATAGAAAGAAATAC 57.949 37.037 0.00 0.00 0.00 1.89
1727 10992 9.829507 CCTCTTGTGATCATAGAAAGAAATACT 57.170 33.333 0.00 0.00 0.00 2.12
1749 11014 6.362248 ACTATATGGGACCAATGTTACCAAC 58.638 40.000 0.00 0.00 36.03 3.77
1790 11055 7.252612 TCATCTAGTCCAATGTGAAAAGGTA 57.747 36.000 0.00 0.00 0.00 3.08
1918 11204 0.827925 TCTGGTGTCTCTCTTGGCGT 60.828 55.000 0.00 0.00 0.00 5.68
1919 11205 0.034059 CTGGTGTCTCTCTTGGCGTT 59.966 55.000 0.00 0.00 0.00 4.84
1949 11235 2.352323 CCGCCACTGGGTTTTGTTTATC 60.352 50.000 0.00 0.00 36.17 1.75
1965 11251 2.799126 TATCGTTGCTTGGGACCATT 57.201 45.000 0.00 0.00 0.00 3.16
1966 11252 1.463674 ATCGTTGCTTGGGACCATTC 58.536 50.000 0.00 0.00 0.00 2.67
1968 11254 0.523072 CGTTGCTTGGGACCATTCTG 59.477 55.000 0.00 0.00 0.00 3.02
1975 11261 1.274703 TGGGACCATTCTGAGGAGCC 61.275 60.000 0.00 0.00 0.00 4.70
1986 11272 0.611714 TGAGGAGCCTTTTACGGACC 59.388 55.000 0.00 0.00 0.00 4.46
1988 11278 1.449070 GGAGCCTTTTACGGACCCG 60.449 63.158 6.94 6.94 46.03 5.28
2012 11302 8.786898 CCGGATGAATGAATAATTGTCTAATGT 58.213 33.333 0.00 0.00 0.00 2.71
2023 11313 9.621629 AATAATTGTCTAATGTTATCGAACCCA 57.378 29.630 0.00 0.00 34.38 4.51
2031 11321 8.044309 TCTAATGTTATCGAACCCATTTCAGAA 58.956 33.333 10.72 0.00 34.38 3.02
2040 11330 5.062558 CGAACCCATTTCAGAAATGCAATTC 59.937 40.000 25.15 22.94 45.36 2.17
2049 11339 7.951530 TTCAGAAATGCAATTCCTTCTTTTC 57.048 32.000 10.92 3.43 33.67 2.29
2090 11381 3.914435 ACTACATCTAAACCCCAAGTGGT 59.086 43.478 0.00 0.00 41.55 4.16
2118 11409 2.891941 GATGCGGGCATGTCCTTCCA 62.892 60.000 15.80 9.16 36.70 3.53
2119 11410 2.361104 GCGGGCATGTCCTTCCAA 60.361 61.111 15.80 0.00 34.39 3.53
2162 11455 8.309163 TGCTGACACAATTTAAATTTCCATTC 57.691 30.769 10.77 4.73 0.00 2.67
2163 11456 7.930325 TGCTGACACAATTTAAATTTCCATTCA 59.070 29.630 10.77 8.42 0.00 2.57
2257 11550 1.068125 CGTACGTCTTCCACACATCCA 60.068 52.381 7.22 0.00 0.00 3.41
2266 11559 0.318614 CCACACATCCAAAACACGCC 60.319 55.000 0.00 0.00 0.00 5.68
2269 11562 1.152652 ACATCCAAAACACGCCCCA 60.153 52.632 0.00 0.00 0.00 4.96
2530 11850 1.594310 GAAGGAGAACGAGCTGCCT 59.406 57.895 0.00 0.00 0.00 4.75
2543 11863 1.630369 AGCTGCCTATCAACCAGTGAA 59.370 47.619 0.00 0.00 40.50 3.18
2547 11867 2.637382 TGCCTATCAACCAGTGAAGTCA 59.363 45.455 0.00 0.00 40.50 3.41
2604 11930 0.683504 TCTCGAGGGTTGAGGCTACC 60.684 60.000 13.56 0.00 34.19 3.18
2682 12009 6.130298 CGATAGTGCACCCAATAAATCAAA 57.870 37.500 14.63 0.00 0.00 2.69
2704 13366 8.836413 TCAAAGTAGCTTGCCATTTATGTATAC 58.164 33.333 0.00 0.00 0.00 1.47
2706 13368 5.932303 AGTAGCTTGCCATTTATGTATACGG 59.068 40.000 0.00 0.00 0.00 4.02
2759 13421 7.882271 AGATTATGAGCCTGTTCAATATTCCTC 59.118 37.037 0.00 0.00 0.00 3.71
2761 13423 4.774124 TGAGCCTGTTCAATATTCCTCTG 58.226 43.478 0.00 0.00 0.00 3.35
2803 13471 7.162761 TGTGTAAAACCTAATCCGATCAGAAA 58.837 34.615 0.00 0.00 0.00 2.52
2805 13473 7.961283 GTGTAAAACCTAATCCGATCAGAAAAC 59.039 37.037 0.00 0.00 0.00 2.43
2818 13500 6.310197 CGATCAGAAAACTTTTAAGCTCTGG 58.690 40.000 12.87 0.70 34.16 3.86
2893 13577 0.881118 GTACACAATGTGGGCACTGG 59.119 55.000 18.37 0.00 37.94 4.00
2898 13582 1.076024 ACAATGTGGGCACTGGATCTT 59.924 47.619 0.00 0.00 0.00 2.40
2899 13583 2.173519 CAATGTGGGCACTGGATCTTT 58.826 47.619 0.00 0.00 0.00 2.52
2932 13616 9.801873 ATTAACAATATACAACTTGAACCATGC 57.198 29.630 0.00 0.00 0.00 4.06
2934 13618 5.163663 ACAATATACAACTTGAACCATGCCG 60.164 40.000 0.00 0.00 0.00 5.69
2935 13619 2.552599 TACAACTTGAACCATGCCGA 57.447 45.000 0.00 0.00 0.00 5.54
2978 13662 3.071457 CCCTTCCCAAAAGCAAAGAACAT 59.929 43.478 0.00 0.00 0.00 2.71
2990 13674 4.038402 AGCAAAGAACATTGTTCCTTGAGG 59.962 41.667 31.14 14.84 32.80 3.86
3003 13687 1.618837 CCTTGAGGGAGTGAAACGAGA 59.381 52.381 0.00 0.00 45.86 4.04
3015 13699 4.450419 AGTGAAACGAGAATGAAGAAGCAG 59.550 41.667 0.00 0.00 45.86 4.24
3037 13721 3.636231 CAAGCCCCCTCGTGTGGA 61.636 66.667 0.00 0.00 0.00 4.02
3074 13758 9.474313 TCAACCTATGCATAAAGAAATTAACCT 57.526 29.630 8.00 0.00 0.00 3.50
3100 13787 4.178545 AGAATAAACACACTTGCCATGC 57.821 40.909 0.00 0.00 0.00 4.06
3108 13795 1.130955 CACTTGCCATGCGTTTGTTC 58.869 50.000 0.00 0.00 0.00 3.18
3154 13841 4.694509 GCTATCTTAGAGCATCCACAATGG 59.305 45.833 0.00 0.00 39.84 3.16
3164 13851 0.676466 TCCACAATGGTAGGCGCTTG 60.676 55.000 7.64 5.18 39.03 4.01
3274 13961 0.622665 CCCCCTCTCATTCAGTGCTT 59.377 55.000 0.00 0.00 0.00 3.91
3327 14014 6.516739 TGGAACAAAGTGTTAAACACATCA 57.483 33.333 0.00 0.00 44.15 3.07
3328 14015 6.925211 TGGAACAAAGTGTTAAACACATCAA 58.075 32.000 0.00 0.00 44.15 2.57
3329 14016 7.551585 TGGAACAAAGTGTTAAACACATCAAT 58.448 30.769 0.00 0.00 44.15 2.57
3330 14017 8.687242 TGGAACAAAGTGTTAAACACATCAATA 58.313 29.630 0.00 0.00 44.15 1.90
3340 14027 8.547894 TGTTAAACACATCAATATCTACATCGC 58.452 33.333 0.00 0.00 0.00 4.58
3341 14028 8.765219 GTTAAACACATCAATATCTACATCGCT 58.235 33.333 0.00 0.00 0.00 4.93
3342 14029 6.775939 AACACATCAATATCTACATCGCTG 57.224 37.500 0.00 0.00 0.00 5.18
3343 14030 5.233225 ACACATCAATATCTACATCGCTGG 58.767 41.667 0.00 0.00 0.00 4.85
3344 14031 4.092529 CACATCAATATCTACATCGCTGGC 59.907 45.833 0.00 0.00 0.00 4.85
3345 14032 4.248058 CATCAATATCTACATCGCTGGCA 58.752 43.478 0.00 0.00 0.00 4.92
3346 14033 3.917988 TCAATATCTACATCGCTGGCAG 58.082 45.455 10.94 10.94 0.00 4.85
3347 14034 3.573967 TCAATATCTACATCGCTGGCAGA 59.426 43.478 20.86 0.00 0.00 4.26
3349 14036 5.418840 TCAATATCTACATCGCTGGCAGATA 59.581 40.000 20.86 5.03 36.13 1.98
3351 14038 3.857549 TCTACATCGCTGGCAGATATC 57.142 47.619 20.86 0.00 0.00 1.63
3353 14040 2.739885 ACATCGCTGGCAGATATCTC 57.260 50.000 20.86 0.00 0.00 2.75
3354 14041 1.274728 ACATCGCTGGCAGATATCTCC 59.725 52.381 20.86 8.11 0.00 3.71
3355 14042 1.274447 CATCGCTGGCAGATATCTCCA 59.726 52.381 20.86 17.63 0.00 3.86
3356 14043 1.637338 TCGCTGGCAGATATCTCCAT 58.363 50.000 20.86 0.00 0.00 3.41
3358 14045 1.274447 CGCTGGCAGATATCTCCATGA 59.726 52.381 20.86 3.38 0.00 3.07
3359 14046 2.674462 CGCTGGCAGATATCTCCATGAG 60.674 54.545 20.86 11.60 0.00 2.90
3361 14048 1.627329 TGGCAGATATCTCCATGAGGC 59.373 52.381 15.76 10.93 33.74 4.70
3362 14049 1.405256 GGCAGATATCTCCATGAGGCG 60.405 57.143 1.03 0.00 33.74 5.52
3364 14051 1.274447 CAGATATCTCCATGAGGCGCA 59.726 52.381 10.83 0.00 33.74 6.09
3367 14054 1.637338 TATCTCCATGAGGCGCATCT 58.363 50.000 23.78 4.45 34.15 2.90
3369 14056 1.597302 CTCCATGAGGCGCATCTGG 60.597 63.158 24.97 24.97 34.15 3.86
3370 14057 2.191375 CCATGAGGCGCATCTGGT 59.809 61.111 23.78 6.49 34.15 4.00
3371 14058 1.452651 CCATGAGGCGCATCTGGTT 60.453 57.895 23.78 2.62 34.15 3.67
3372 14059 0.179048 CCATGAGGCGCATCTGGTTA 60.179 55.000 23.78 2.05 34.15 2.85
3374 14061 0.107456 ATGAGGCGCATCTGGTTAGG 59.893 55.000 23.78 0.00 28.85 2.69
3375 14062 1.264749 TGAGGCGCATCTGGTTAGGT 61.265 55.000 23.78 0.00 0.00 3.08
3376 14063 0.750850 GAGGCGCATCTGGTTAGGTA 59.249 55.000 16.00 0.00 0.00 3.08
3377 14064 0.753262 AGGCGCATCTGGTTAGGTAG 59.247 55.000 10.83 0.00 0.00 3.18
3378 14065 0.464452 GGCGCATCTGGTTAGGTAGT 59.536 55.000 10.83 0.00 0.00 2.73
3380 14067 2.101917 GGCGCATCTGGTTAGGTAGTTA 59.898 50.000 10.83 0.00 0.00 2.24
3381 14068 3.381949 GCGCATCTGGTTAGGTAGTTAG 58.618 50.000 0.30 0.00 0.00 2.34
3382 14069 3.067742 GCGCATCTGGTTAGGTAGTTAGA 59.932 47.826 0.30 0.00 0.00 2.10
3383 14070 4.793353 GCGCATCTGGTTAGGTAGTTAGAG 60.793 50.000 0.30 0.00 0.00 2.43
3385 14072 5.530171 CGCATCTGGTTAGGTAGTTAGAGTA 59.470 44.000 0.00 0.00 0.00 2.59
3387 14074 7.389884 CGCATCTGGTTAGGTAGTTAGAGTATA 59.610 40.741 0.00 0.00 0.00 1.47
3388 14075 9.075678 GCATCTGGTTAGGTAGTTAGAGTATAA 57.924 37.037 0.00 0.00 0.00 0.98
3421 14108 8.380099 TCTCTTGTATCTCTTATCTCTACCTCC 58.620 40.741 0.00 0.00 0.00 4.30
3422 14109 8.282801 TCTTGTATCTCTTATCTCTACCTCCT 57.717 38.462 0.00 0.00 0.00 3.69
3423 14110 8.729047 TCTTGTATCTCTTATCTCTACCTCCTT 58.271 37.037 0.00 0.00 0.00 3.36
3424 14111 9.362151 CTTGTATCTCTTATCTCTACCTCCTTT 57.638 37.037 0.00 0.00 0.00 3.11
3426 14113 8.729047 TGTATCTCTTATCTCTACCTCCTTTCT 58.271 37.037 0.00 0.00 0.00 2.52
3427 14114 9.582648 GTATCTCTTATCTCTACCTCCTTTCTT 57.417 37.037 0.00 0.00 0.00 2.52
3434 14121 7.849322 ATCTCTACCTCCTTTCTTTATCTCC 57.151 40.000 0.00 0.00 0.00 3.71
3435 14122 6.742756 TCTCTACCTCCTTTCTTTATCTCCA 58.257 40.000 0.00 0.00 0.00 3.86
3436 14123 7.189794 TCTCTACCTCCTTTCTTTATCTCCAA 58.810 38.462 0.00 0.00 0.00 3.53
3437 14124 7.343316 TCTCTACCTCCTTTCTTTATCTCCAAG 59.657 40.741 0.00 0.00 0.00 3.61
3439 14126 6.704056 ACCTCCTTTCTTTATCTCCAAGAA 57.296 37.500 0.00 0.00 38.27 2.52
3440 14127 7.277405 ACCTCCTTTCTTTATCTCCAAGAAT 57.723 36.000 0.00 0.00 39.46 2.40
3441 14128 7.115414 ACCTCCTTTCTTTATCTCCAAGAATG 58.885 38.462 0.00 0.00 39.46 2.67
3442 14129 7.115414 CCTCCTTTCTTTATCTCCAAGAATGT 58.885 38.462 0.00 0.00 39.46 2.71
3443 14130 8.267894 CCTCCTTTCTTTATCTCCAAGAATGTA 58.732 37.037 0.00 0.00 39.46 2.29
3444 14131 9.672673 CTCCTTTCTTTATCTCCAAGAATGTAA 57.327 33.333 0.00 0.00 39.46 2.41
3452 14139 8.964476 TTATCTCCAAGAATGTAATCTCAACC 57.036 34.615 0.00 0.00 0.00 3.77
3453 14140 6.373005 TCTCCAAGAATGTAATCTCAACCA 57.627 37.500 0.00 0.00 0.00 3.67
3454 14141 6.778821 TCTCCAAGAATGTAATCTCAACCAA 58.221 36.000 0.00 0.00 0.00 3.67
3455 14142 7.230747 TCTCCAAGAATGTAATCTCAACCAAA 58.769 34.615 0.00 0.00 0.00 3.28
3456 14143 7.890127 TCTCCAAGAATGTAATCTCAACCAAAT 59.110 33.333 0.00 0.00 0.00 2.32
3458 14145 7.451255 TCCAAGAATGTAATCTCAACCAAATGT 59.549 33.333 0.00 0.00 0.00 2.71
3459 14146 8.739039 CCAAGAATGTAATCTCAACCAAATGTA 58.261 33.333 0.00 0.00 0.00 2.29
3462 14149 8.408601 AGAATGTAATCTCAACCAAATGTATGC 58.591 33.333 0.00 0.00 0.00 3.14
3463 14150 6.117911 TGTAATCTCAACCAAATGTATGCG 57.882 37.500 0.00 0.00 0.00 4.73
3464 14151 3.698029 ATCTCAACCAAATGTATGCGC 57.302 42.857 0.00 0.00 0.00 6.09
3465 14152 2.710377 TCTCAACCAAATGTATGCGCT 58.290 42.857 9.73 0.00 0.00 5.92
3468 14155 2.556189 TCAACCAAATGTATGCGCTGTT 59.444 40.909 9.73 0.00 0.00 3.16
3469 14156 3.753797 TCAACCAAATGTATGCGCTGTTA 59.246 39.130 9.73 0.00 0.00 2.41
3470 14157 4.397730 TCAACCAAATGTATGCGCTGTTAT 59.602 37.500 9.73 0.00 0.00 1.89
3471 14158 4.291540 ACCAAATGTATGCGCTGTTATG 57.708 40.909 9.73 0.00 0.00 1.90
3474 14161 2.928801 ATGTATGCGCTGTTATGGGA 57.071 45.000 9.73 0.00 0.00 4.37
3477 14164 1.128200 TATGCGCTGTTATGGGAGGT 58.872 50.000 9.73 0.00 0.00 3.85
3479 14166 1.078426 GCGCTGTTATGGGAGGTGT 60.078 57.895 0.00 0.00 0.00 4.16
3482 14169 1.032114 GCTGTTATGGGAGGTGTGCC 61.032 60.000 0.00 0.00 33.79 5.01
3483 14170 0.394352 CTGTTATGGGAGGTGTGCCC 60.394 60.000 0.00 0.00 46.22 5.36
3484 14171 1.076995 GTTATGGGAGGTGTGCCCC 60.077 63.158 0.00 0.00 45.40 5.80
3488 14175 3.017581 GGGAGGTGTGCCCCATCT 61.018 66.667 0.00 0.00 42.24 2.90
3489 14176 1.692749 GGGAGGTGTGCCCCATCTA 60.693 63.158 0.00 0.00 42.24 1.98
3490 14177 1.062488 GGGAGGTGTGCCCCATCTAT 61.062 60.000 0.00 0.00 42.24 1.98
3491 14178 1.729586 GGAGGTGTGCCCCATCTATA 58.270 55.000 0.00 0.00 33.53 1.31
3492 14179 2.269940 GGAGGTGTGCCCCATCTATAT 58.730 52.381 0.00 0.00 33.53 0.86
3493 14180 3.450904 GGAGGTGTGCCCCATCTATATA 58.549 50.000 0.00 0.00 33.53 0.86
3495 14182 4.323562 GGAGGTGTGCCCCATCTATATAAC 60.324 50.000 0.00 0.00 33.53 1.89
3497 14184 4.041691 AGGTGTGCCCCATCTATATAACAC 59.958 45.833 0.00 0.00 30.76 3.32
3498 14185 3.994392 GTGTGCCCCATCTATATAACACG 59.006 47.826 0.00 0.00 0.00 4.49
3499 14186 3.898741 TGTGCCCCATCTATATAACACGA 59.101 43.478 0.00 0.00 0.00 4.35
3500 14187 4.345547 TGTGCCCCATCTATATAACACGAA 59.654 41.667 0.00 0.00 0.00 3.85
3503 14190 4.504858 CCCCATCTATATAACACGAAGCC 58.495 47.826 0.00 0.00 0.00 4.35
3504 14191 4.020573 CCCCATCTATATAACACGAAGCCA 60.021 45.833 0.00 0.00 0.00 4.75
3505 14192 5.338381 CCCCATCTATATAACACGAAGCCAT 60.338 44.000 0.00 0.00 0.00 4.40
3506 14193 5.812642 CCCATCTATATAACACGAAGCCATC 59.187 44.000 0.00 0.00 0.00 3.51
3527 14214 3.614399 CCTGAGAAGGCAAGACGTT 57.386 52.632 0.00 0.00 0.00 3.99
3529 14216 1.433534 CTGAGAAGGCAAGACGTTCC 58.566 55.000 0.00 0.00 42.85 3.62
3530 14217 0.319555 TGAGAAGGCAAGACGTTCCG 60.320 55.000 0.00 0.00 42.85 4.30
3531 14218 1.627550 GAGAAGGCAAGACGTTCCGC 61.628 60.000 0.00 0.00 42.85 5.54
3532 14219 1.668151 GAAGGCAAGACGTTCCGCT 60.668 57.895 0.00 0.00 37.22 5.52
3533 14220 0.389426 GAAGGCAAGACGTTCCGCTA 60.389 55.000 0.00 0.00 37.22 4.26
3534 14221 0.389948 AAGGCAAGACGTTCCGCTAG 60.390 55.000 0.00 0.00 0.00 3.42
3535 14222 1.080025 GGCAAGACGTTCCGCTAGT 60.080 57.895 0.00 0.00 0.00 2.57
3537 14224 0.714439 GCAAGACGTTCCGCTAGTTC 59.286 55.000 0.00 0.00 0.00 3.01
3539 14226 1.719780 CAAGACGTTCCGCTAGTTCAC 59.280 52.381 0.00 0.00 0.00 3.18
3540 14227 0.956633 AGACGTTCCGCTAGTTCACA 59.043 50.000 0.00 0.00 0.00 3.58
3541 14228 1.058404 GACGTTCCGCTAGTTCACAC 58.942 55.000 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.519799 AACCTTAAGTCATCACTTGAGAAAAA 57.480 30.769 2.66 0.00 45.17 1.94
7 8 8.519799 AAACCTTAAGTCATCACTTGAGAAAA 57.480 30.769 2.66 0.00 45.17 2.29
8 9 9.793259 ATAAACCTTAAGTCATCACTTGAGAAA 57.207 29.630 2.66 0.00 45.17 2.52
9 10 9.436957 GATAAACCTTAAGTCATCACTTGAGAA 57.563 33.333 2.66 0.00 45.17 2.87
10 11 8.593679 TGATAAACCTTAAGTCATCACTTGAGA 58.406 33.333 2.66 0.00 45.17 3.27
11 12 8.777865 TGATAAACCTTAAGTCATCACTTGAG 57.222 34.615 0.97 0.00 43.17 3.02
12 13 9.739276 ATTGATAAACCTTAAGTCATCACTTGA 57.261 29.630 0.97 0.00 43.17 3.02
13 14 9.994432 GATTGATAAACCTTAAGTCATCACTTG 57.006 33.333 0.97 0.00 43.17 3.16
14 15 9.178758 GGATTGATAAACCTTAAGTCATCACTT 57.821 33.333 0.97 0.00 45.39 3.16
16 17 8.738645 AGGATTGATAAACCTTAAGTCATCAC 57.261 34.615 0.97 0.00 0.00 3.06
36 37 4.290942 CCTAGGTACACCTCTCAAGGATT 58.709 47.826 3.65 0.00 44.77 3.01
38 39 2.024273 CCCTAGGTACACCTCTCAAGGA 60.024 54.545 14.20 0.00 44.77 3.36
39 40 2.389715 CCCTAGGTACACCTCTCAAGG 58.610 57.143 8.29 6.10 44.77 3.61
40 41 1.757699 GCCCTAGGTACACCTCTCAAG 59.242 57.143 8.29 0.00 44.77 3.02
41 42 1.621622 GGCCCTAGGTACACCTCTCAA 60.622 57.143 8.29 0.00 44.77 3.02
42 43 0.032416 GGCCCTAGGTACACCTCTCA 60.032 60.000 8.29 0.00 44.77 3.27
43 44 0.759812 GGGCCCTAGGTACACCTCTC 60.760 65.000 17.04 0.00 44.77 3.20
47 48 2.070650 CAGGGGCCCTAGGTACACC 61.071 68.421 28.28 11.65 29.64 4.16
49 50 0.345502 ATTCAGGGGCCCTAGGTACA 59.654 55.000 28.28 5.85 29.64 2.90
50 51 0.765510 CATTCAGGGGCCCTAGGTAC 59.234 60.000 28.28 2.94 29.64 3.34
51 52 1.060163 GCATTCAGGGGCCCTAGGTA 61.060 60.000 28.28 8.40 29.64 3.08
53 54 2.349100 CTGCATTCAGGGGCCCTAGG 62.349 65.000 28.28 14.43 36.68 3.02
54 55 1.150081 CTGCATTCAGGGGCCCTAG 59.850 63.158 28.28 19.68 36.68 3.02
55 56 0.327095 TACTGCATTCAGGGGCCCTA 60.327 55.000 28.28 12.07 44.54 3.53
58 59 1.152881 CCTACTGCATTCAGGGGCC 60.153 63.158 0.00 0.00 44.54 5.80
59 60 1.825622 GCCTACTGCATTCAGGGGC 60.826 63.158 13.49 13.49 46.96 5.80
60 61 1.152881 GGCCTACTGCATTCAGGGG 60.153 63.158 0.00 0.10 44.54 4.79
61 62 0.465097 CTGGCCTACTGCATTCAGGG 60.465 60.000 3.32 0.00 44.54 4.45
62 63 0.254178 ACTGGCCTACTGCATTCAGG 59.746 55.000 3.32 4.42 44.54 3.86
63 64 2.831333 CTACTGGCCTACTGCATTCAG 58.169 52.381 3.32 0.00 45.71 3.02
65 66 1.587547 GCTACTGGCCTACTGCATTC 58.412 55.000 3.32 0.00 43.89 2.67
66 67 3.788672 GCTACTGGCCTACTGCATT 57.211 52.632 3.32 0.00 43.89 3.56
76 77 2.124529 GGGAGCTTGGCTACTGGC 60.125 66.667 1.64 0.00 39.87 4.85
79 80 0.326264 CACTTGGGAGCTTGGCTACT 59.674 55.000 1.64 0.00 39.87 2.57
80 81 0.324943 TCACTTGGGAGCTTGGCTAC 59.675 55.000 0.00 0.00 39.88 3.58
81 82 1.064003 TTCACTTGGGAGCTTGGCTA 58.936 50.000 0.00 0.00 39.88 3.93
82 83 0.538287 GTTCACTTGGGAGCTTGGCT 60.538 55.000 0.00 0.00 43.88 4.75
83 84 0.823356 TGTTCACTTGGGAGCTTGGC 60.823 55.000 0.00 0.00 0.00 4.52
84 85 0.954452 GTGTTCACTTGGGAGCTTGG 59.046 55.000 0.00 0.00 0.00 3.61
85 86 0.954452 GGTGTTCACTTGGGAGCTTG 59.046 55.000 2.98 0.00 0.00 4.01
87 88 1.352622 TGGGTGTTCACTTGGGAGCT 61.353 55.000 2.98 0.00 0.00 4.09
89 90 0.890996 GCTGGGTGTTCACTTGGGAG 60.891 60.000 2.98 0.00 0.00 4.30
90 91 1.150536 GCTGGGTGTTCACTTGGGA 59.849 57.895 2.98 0.00 0.00 4.37
95 96 2.515901 GGTGGCTGGGTGTTCACT 59.484 61.111 2.98 0.00 0.00 3.41
110 111 1.202698 GCATCTTCTTGCCCTATCGGT 60.203 52.381 0.00 0.00 36.60 4.69
129 130 3.849953 CTTACTTGCGGTCGCGGC 61.850 66.667 6.13 3.04 45.51 6.53
132 133 3.497031 GCCCTTACTTGCGGTCGC 61.497 66.667 8.54 8.54 42.35 5.19
138 139 0.822164 TCCTCTACGCCCTTACTTGC 59.178 55.000 0.00 0.00 0.00 4.01
140 141 2.528673 ACTCCTCTACGCCCTTACTT 57.471 50.000 0.00 0.00 0.00 2.24
141 142 2.240667 TGTACTCCTCTACGCCCTTACT 59.759 50.000 0.00 0.00 0.00 2.24
142 143 2.648059 TGTACTCCTCTACGCCCTTAC 58.352 52.381 0.00 0.00 0.00 2.34
143 144 3.370840 TTGTACTCCTCTACGCCCTTA 57.629 47.619 0.00 0.00 0.00 2.69
144 145 2.226962 TTGTACTCCTCTACGCCCTT 57.773 50.000 0.00 0.00 0.00 3.95
145 146 2.431057 CAATTGTACTCCTCTACGCCCT 59.569 50.000 0.00 0.00 0.00 5.19
146 147 2.429610 TCAATTGTACTCCTCTACGCCC 59.570 50.000 5.13 0.00 0.00 6.13
147 148 3.491104 CCTCAATTGTACTCCTCTACGCC 60.491 52.174 5.13 0.00 0.00 5.68
148 149 3.380637 TCCTCAATTGTACTCCTCTACGC 59.619 47.826 5.13 0.00 0.00 4.42
150 151 6.681865 GCTTCTCCTCAATTGTACTCCTCTAC 60.682 46.154 5.13 0.00 0.00 2.59
152 153 4.161377 GCTTCTCCTCAATTGTACTCCTCT 59.839 45.833 5.13 0.00 0.00 3.69
155 156 4.438148 GAGCTTCTCCTCAATTGTACTCC 58.562 47.826 5.13 0.00 0.00 3.85
190 192 1.684983 GTCCCATCTAAATCCCGACGA 59.315 52.381 0.00 0.00 0.00 4.20
191 193 1.602165 CGTCCCATCTAAATCCCGACG 60.602 57.143 0.00 0.00 36.15 5.12
194 196 1.000955 CTCCGTCCCATCTAAATCCCG 59.999 57.143 0.00 0.00 0.00 5.14
201 203 1.152819 CCGGTCTCCGTCCCATCTA 60.153 63.158 7.40 0.00 46.80 1.98
209 211 1.152525 ATATCAGGCCGGTCTCCGT 60.153 57.895 5.00 0.00 46.80 4.69
211 213 0.832135 TCCATATCAGGCCGGTCTCC 60.832 60.000 5.00 0.00 0.00 3.71
218 227 1.204113 CCTCCCCTCCATATCAGGCC 61.204 65.000 0.00 0.00 0.00 5.19
222 231 1.698928 CCAACCCTCCCCTCCATATCA 60.699 57.143 0.00 0.00 0.00 2.15
225 234 0.030092 CTCCAACCCTCCCCTCCATA 60.030 60.000 0.00 0.00 0.00 2.74
226 235 1.308216 CTCCAACCCTCCCCTCCAT 60.308 63.158 0.00 0.00 0.00 3.41
241 250 1.904990 GCACCCTCACCTTCTCCTCC 61.905 65.000 0.00 0.00 0.00 4.30
243 252 0.907230 GAGCACCCTCACCTTCTCCT 60.907 60.000 0.00 0.00 38.03 3.69
286 301 3.134985 GGGAGGTTCCATCTTCTCCTTAC 59.865 52.174 7.96 0.00 43.81 2.34
287 302 3.385115 GGGAGGTTCCATCTTCTCCTTA 58.615 50.000 7.96 0.00 43.81 2.69
288 303 2.200955 GGGAGGTTCCATCTTCTCCTT 58.799 52.381 7.96 0.00 43.81 3.36
289 304 1.886422 GGGAGGTTCCATCTTCTCCT 58.114 55.000 7.96 0.00 43.81 3.69
297 312 0.833287 CTGATGACGGGAGGTTCCAT 59.167 55.000 0.00 0.00 38.64 3.41
298 313 0.544357 ACTGATGACGGGAGGTTCCA 60.544 55.000 0.00 0.00 38.64 3.53
312 327 1.440893 CTGCTCTAGCGGCACTGAT 59.559 57.895 1.45 0.00 45.83 2.90
319 334 3.230245 CCCCTCCTGCTCTAGCGG 61.230 72.222 3.69 3.69 45.83 5.52
320 335 2.123683 TCCCCTCCTGCTCTAGCG 60.124 66.667 0.00 0.00 45.83 4.26
323 338 2.279073 CCGTCCCCTCCTGCTCTA 59.721 66.667 0.00 0.00 0.00 2.43
343 358 6.776116 TCTCTAGGAGAAAACTTGTGTGTCTA 59.224 38.462 0.00 0.00 35.59 2.59
356 371 4.890581 GGAGCACTGTATCTCTAGGAGAAA 59.109 45.833 1.26 0.00 42.27 2.52
357 372 4.079730 TGGAGCACTGTATCTCTAGGAGAA 60.080 45.833 1.26 0.00 42.27 2.87
359 374 3.820467 CTGGAGCACTGTATCTCTAGGAG 59.180 52.174 11.95 0.00 35.22 3.69
361 376 2.890311 CCTGGAGCACTGTATCTCTAGG 59.110 54.545 19.53 19.53 46.66 3.02
362 377 2.295909 GCCTGGAGCACTGTATCTCTAG 59.704 54.545 0.00 12.51 42.97 2.43
365 380 3.677002 GCCTGGAGCACTGTATCTC 57.323 57.895 0.00 1.86 42.97 2.75
366 381 3.276833 GAGAGCCTGGAGCACTGTATCT 61.277 54.545 0.00 0.00 43.06 1.98
370 385 1.229145 AGAGAGCCTGGAGCACTGT 60.229 57.895 0.00 0.00 43.06 3.55
371 386 1.218585 CAGAGAGCCTGGAGCACTG 59.781 63.158 0.00 0.00 43.06 3.66
375 390 0.249405 CGATTCAGAGAGCCTGGAGC 60.249 60.000 0.00 0.00 43.12 4.70
377 392 1.819229 GCGATTCAGAGAGCCTGGA 59.181 57.895 0.00 0.00 43.12 3.86
378 393 1.591059 CGCGATTCAGAGAGCCTGG 60.591 63.158 0.00 0.00 43.12 4.45
384 1343 3.449227 ACCGGCGCGATTCAGAGA 61.449 61.111 12.10 0.00 0.00 3.10
407 1366 2.738521 CTATTGGGCCGATCCGCG 60.739 66.667 10.27 0.00 40.47 6.46
409 1368 0.606401 AATGCTATTGGGCCGATCCG 60.606 55.000 10.27 4.05 34.94 4.18
410 1369 1.620822 AAATGCTATTGGGCCGATCC 58.379 50.000 10.27 3.43 0.00 3.36
411 1370 2.488153 GGTAAATGCTATTGGGCCGATC 59.512 50.000 10.27 0.00 0.00 3.69
412 1371 2.108250 AGGTAAATGCTATTGGGCCGAT 59.892 45.455 11.88 11.88 0.00 4.18
413 1372 1.493022 AGGTAAATGCTATTGGGCCGA 59.507 47.619 0.00 0.00 0.00 5.54
424 1395 1.165270 ACGAGCCAACAGGTAAATGC 58.835 50.000 0.00 0.00 0.00 3.56
454 1425 1.057847 CGAAATCAGTGACGAACGAGC 59.942 52.381 0.00 0.00 0.00 5.03
455 1426 2.581637 TCGAAATCAGTGACGAACGAG 58.418 47.619 0.00 0.00 0.00 4.18
456 1427 2.224784 TCTCGAAATCAGTGACGAACGA 59.775 45.455 0.00 4.31 34.50 3.85
457 1428 2.581637 TCTCGAAATCAGTGACGAACG 58.418 47.619 0.00 0.00 34.50 3.95
460 1431 4.238761 ACTTTCTCGAAATCAGTGACGA 57.761 40.909 0.00 0.00 0.00 4.20
513 1485 6.364706 CCGATTTCGAAAAACCAATGAATTCA 59.635 34.615 15.66 11.26 43.02 2.57
514 1486 6.364976 ACCGATTTCGAAAAACCAATGAATTC 59.635 34.615 15.66 0.00 43.02 2.17
521 1493 4.541779 CATGACCGATTTCGAAAAACCAA 58.458 39.130 15.66 0.00 43.02 3.67
522 1494 3.610585 GCATGACCGATTTCGAAAAACCA 60.611 43.478 15.66 9.10 43.02 3.67
523 1495 2.914838 GCATGACCGATTTCGAAAAACC 59.085 45.455 15.66 6.47 43.02 3.27
524 1496 2.588106 CGCATGACCGATTTCGAAAAAC 59.412 45.455 15.66 11.03 43.02 2.43
525 1497 2.413502 CCGCATGACCGATTTCGAAAAA 60.414 45.455 15.66 0.00 43.02 1.94
526 1498 1.129624 CCGCATGACCGATTTCGAAAA 59.870 47.619 15.66 0.00 43.02 2.29
530 1684 0.508641 GATCCGCATGACCGATTTCG 59.491 55.000 0.00 0.00 39.44 3.46
531 1685 0.508641 CGATCCGCATGACCGATTTC 59.491 55.000 0.00 0.00 0.00 2.17
536 1690 3.032609 GCTCGATCCGCATGACCG 61.033 66.667 0.00 0.00 0.00 4.79
545 1699 4.899239 CCGTGGCTGGCTCGATCC 62.899 72.222 24.19 0.00 0.00 3.36
546 1700 4.148825 ACCGTGGCTGGCTCGATC 62.149 66.667 24.19 0.00 0.00 3.69
547 1701 4.148825 GACCGTGGCTGGCTCGAT 62.149 66.667 24.19 9.88 0.00 3.59
549 1703 4.457496 ATGACCGTGGCTGGCTCG 62.457 66.667 17.21 17.21 0.00 5.03
550 1704 2.512515 GATGACCGTGGCTGGCTC 60.513 66.667 2.00 0.00 0.00 4.70
552 1706 4.408821 TGGATGACCGTGGCTGGC 62.409 66.667 0.00 0.00 39.42 4.85
553 1707 2.436646 GTGGATGACCGTGGCTGG 60.437 66.667 0.00 0.00 39.42 4.85
554 1708 2.436646 GGTGGATGACCGTGGCTG 60.437 66.667 0.00 0.00 39.42 4.85
561 1715 3.391665 CTGCCCGAGGTGGATGACC 62.392 68.421 0.00 0.00 46.58 4.02
562 1716 2.187946 CTGCCCGAGGTGGATGAC 59.812 66.667 0.00 0.00 42.00 3.06
563 1717 3.083349 CCTGCCCGAGGTGGATGA 61.083 66.667 0.00 0.00 42.00 2.92
564 1718 3.083349 TCCTGCCCGAGGTGGATG 61.083 66.667 0.00 0.00 43.37 3.51
565 1719 3.083997 GTCCTGCCCGAGGTGGAT 61.084 66.667 8.89 0.00 43.37 3.41
566 1720 3.924013 ATGTCCTGCCCGAGGTGGA 62.924 63.158 0.00 0.00 43.37 4.02
567 1721 3.402681 ATGTCCTGCCCGAGGTGG 61.403 66.667 0.00 0.00 43.37 4.61
568 1722 2.124983 CATGTCCTGCCCGAGGTG 60.125 66.667 0.00 0.00 43.37 4.00
572 1726 1.296392 CTGAACATGTCCTGCCCGA 59.704 57.895 0.00 0.00 0.00 5.14
573 1727 1.746615 CCTGAACATGTCCTGCCCG 60.747 63.158 0.00 0.00 0.00 6.13
574 1728 0.678048 GTCCTGAACATGTCCTGCCC 60.678 60.000 0.00 0.00 0.00 5.36
575 1729 0.326264 AGTCCTGAACATGTCCTGCC 59.674 55.000 0.00 0.00 0.00 4.85
576 1730 2.234908 AGTAGTCCTGAACATGTCCTGC 59.765 50.000 0.00 0.00 0.00 4.85
577 1731 4.543590 AAGTAGTCCTGAACATGTCCTG 57.456 45.455 0.00 0.00 0.00 3.86
578 1732 5.187967 CCTAAAGTAGTCCTGAACATGTCCT 59.812 44.000 0.00 0.00 0.00 3.85
579 1733 5.046520 ACCTAAAGTAGTCCTGAACATGTCC 60.047 44.000 0.00 0.00 0.00 4.02
580 1734 5.869888 CACCTAAAGTAGTCCTGAACATGTC 59.130 44.000 0.00 0.00 0.00 3.06
582 1736 4.631813 GCACCTAAAGTAGTCCTGAACATG 59.368 45.833 0.00 0.00 0.00 3.21
584 1738 3.644265 TGCACCTAAAGTAGTCCTGAACA 59.356 43.478 0.00 0.00 0.00 3.18
585 1739 4.246458 CTGCACCTAAAGTAGTCCTGAAC 58.754 47.826 0.00 0.00 0.00 3.18
586 1740 3.306780 GCTGCACCTAAAGTAGTCCTGAA 60.307 47.826 0.00 0.00 0.00 3.02
587 1741 2.233922 GCTGCACCTAAAGTAGTCCTGA 59.766 50.000 0.00 0.00 0.00 3.86
599 5538 0.036388 CGGGAAGAAAGCTGCACCTA 60.036 55.000 1.02 0.00 0.00 3.08
707 5646 1.963172 ACCACGTCTTTTCTTGTCCC 58.037 50.000 0.00 0.00 0.00 4.46
719 5658 5.007332 ACAATAACAGAAGTGAAACCACGTC 59.993 40.000 0.00 0.00 41.34 4.34
751 5690 7.114811 CGTTTCAAAATAGATGACCCAACTTTG 59.885 37.037 0.00 0.00 0.00 2.77
752 5691 7.013846 TCGTTTCAAAATAGATGACCCAACTTT 59.986 33.333 0.00 0.00 0.00 2.66
754 5693 6.001460 TCGTTTCAAAATAGATGACCCAACT 58.999 36.000 0.00 0.00 0.00 3.16
756 5695 6.072175 CCTTCGTTTCAAAATAGATGACCCAA 60.072 38.462 0.00 0.00 0.00 4.12
758 5697 5.163652 CCCTTCGTTTCAAAATAGATGACCC 60.164 44.000 0.00 0.00 0.00 4.46
759 5698 5.646360 TCCCTTCGTTTCAAAATAGATGACC 59.354 40.000 0.00 0.00 0.00 4.02
762 5701 6.743575 ACTCCCTTCGTTTCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
764 5703 5.873164 GCTACTCCCTTCGTTTCAAAATAGA 59.127 40.000 0.00 0.00 0.00 1.98
765 5704 5.875359 AGCTACTCCCTTCGTTTCAAAATAG 59.125 40.000 0.00 0.00 0.00 1.73
766 5705 5.801380 AGCTACTCCCTTCGTTTCAAAATA 58.199 37.500 0.00 0.00 0.00 1.40
768 5707 4.081322 AGCTACTCCCTTCGTTTCAAAA 57.919 40.909 0.00 0.00 0.00 2.44
770 5709 3.368116 GCTAGCTACTCCCTTCGTTTCAA 60.368 47.826 7.70 0.00 0.00 2.69
772 5711 2.165845 TGCTAGCTACTCCCTTCGTTTC 59.834 50.000 17.23 0.00 0.00 2.78
776 5715 0.671251 CCTGCTAGCTACTCCCTTCG 59.329 60.000 17.23 0.00 0.00 3.79
777 5716 0.391228 GCCTGCTAGCTACTCCCTTC 59.609 60.000 17.23 0.00 0.00 3.46
778 5717 0.325671 TGCCTGCTAGCTACTCCCTT 60.326 55.000 17.23 0.00 0.00 3.95
779 5718 0.325671 TTGCCTGCTAGCTACTCCCT 60.326 55.000 17.23 0.00 0.00 4.20
780 5719 0.541863 TTTGCCTGCTAGCTACTCCC 59.458 55.000 17.23 0.00 0.00 4.30
781 5720 2.010497 GTTTTGCCTGCTAGCTACTCC 58.990 52.381 17.23 0.62 0.00 3.85
782 5721 1.661112 CGTTTTGCCTGCTAGCTACTC 59.339 52.381 17.23 3.24 0.00 2.59
783 5722 1.002087 ACGTTTTGCCTGCTAGCTACT 59.998 47.619 17.23 0.00 0.00 2.57
784 5723 1.439679 ACGTTTTGCCTGCTAGCTAC 58.560 50.000 17.23 5.78 0.00 3.58
863 5872 0.254462 GAAGGAAGGAAGGCAGGAGG 59.746 60.000 0.00 0.00 0.00 4.30
869 5878 0.393132 CGGAAGGAAGGAAGGAAGGC 60.393 60.000 0.00 0.00 0.00 4.35
1095 10201 5.061920 GATCCAGGATCCGTTGTATAGAC 57.938 47.826 17.97 0.00 33.37 2.59
1145 10255 2.289882 CCTGCAGGTCAGATTTGAGACA 60.290 50.000 25.53 0.00 45.72 3.41
1264 10377 1.519408 AAAACCCTGTCATTCGACCG 58.481 50.000 0.00 0.00 41.85 4.79
1312 10425 0.823769 TGCCGTATCTGGAGCGAGAT 60.824 55.000 0.79 0.79 36.61 2.75
1441 10554 6.488344 TGTGCTAAAATGTTTACCTGACATCA 59.512 34.615 0.00 0.00 36.76 3.07
1444 10557 5.277586 CGTGTGCTAAAATGTTTACCTGACA 60.278 40.000 0.00 0.00 0.00 3.58
1458 10571 1.122849 GTTCGTCGTCGTGTGCTAAA 58.877 50.000 1.33 0.00 38.33 1.85
1459 10572 0.661187 GGTTCGTCGTCGTGTGCTAA 60.661 55.000 1.33 0.00 38.33 3.09
1461 10574 2.354305 GGTTCGTCGTCGTGTGCT 60.354 61.111 1.33 0.00 38.33 4.40
1467 10580 1.055338 GGTTAAGTGGTTCGTCGTCG 58.945 55.000 0.00 0.00 38.55 5.12
1470 10583 1.523934 GTGTGGTTAAGTGGTTCGTCG 59.476 52.381 0.00 0.00 0.00 5.12
1472 10585 2.695127 TGTGTGGTTAAGTGGTTCGT 57.305 45.000 0.00 0.00 0.00 3.85
1479 10592 2.884639 GCAGGTGATTGTGTGGTTAAGT 59.115 45.455 0.00 0.00 0.00 2.24
1520 10637 1.761449 TGCAGAGTCCAAAGTGCAAA 58.239 45.000 1.78 0.00 42.79 3.68
1521 10638 3.493028 TGCAGAGTCCAAAGTGCAA 57.507 47.368 1.78 0.00 42.79 4.08
1522 10639 1.761449 TTTGCAGAGTCCAAAGTGCA 58.239 45.000 0.17 0.17 44.01 4.57
1523 10640 3.054878 CAATTTGCAGAGTCCAAAGTGC 58.945 45.455 8.63 2.64 40.05 4.40
1525 10642 6.449698 CAATACAATTTGCAGAGTCCAAAGT 58.550 36.000 0.00 0.00 35.84 2.66
1526 10643 6.939551 CAATACAATTTGCAGAGTCCAAAG 57.060 37.500 0.00 0.00 35.84 2.77
1565 10788 4.274214 CAGAGACAAGACATCAGCAAAACA 59.726 41.667 0.00 0.00 0.00 2.83
1625 10870 2.124695 GGGATGTTCACCGCTCCC 60.125 66.667 0.00 0.00 40.60 4.30
1674 10920 2.238646 TCACTGAGTGAAGTGGGTTTGT 59.761 45.455 13.74 0.00 46.27 2.83
1766 11031 6.126863 ACCTTTTCACATTGGACTAGATGA 57.873 37.500 0.00 0.00 0.00 2.92
1779 11044 8.145122 GGACCAAAAATACAATACCTTTTCACA 58.855 33.333 0.00 0.00 0.00 3.58
1781 11046 8.251383 TGGACCAAAAATACAATACCTTTTCA 57.749 30.769 0.00 0.00 0.00 2.69
1782 11047 8.581578 TCTGGACCAAAAATACAATACCTTTTC 58.418 33.333 0.00 0.00 0.00 2.29
1790 11055 5.393866 ACCACTCTGGACCAAAAATACAAT 58.606 37.500 0.00 0.00 40.96 2.71
1803 11068 6.173339 GTTCATATTCTGAAACCACTCTGGA 58.827 40.000 0.00 0.00 45.27 3.86
1832 11097 5.471116 CCTGATTTGTCTGATTTGTCAGTGA 59.529 40.000 5.45 0.00 38.75 3.41
1847 11117 4.584638 TTATACACCTGCCCTGATTTGT 57.415 40.909 0.00 0.00 0.00 2.83
1848 11118 5.829924 AGATTTATACACCTGCCCTGATTTG 59.170 40.000 0.00 0.00 0.00 2.32
1849 11119 5.829924 CAGATTTATACACCTGCCCTGATTT 59.170 40.000 0.00 0.00 0.00 2.17
1851 11121 4.660303 TCAGATTTATACACCTGCCCTGAT 59.340 41.667 0.00 0.00 0.00 2.90
1852 11122 4.037222 TCAGATTTATACACCTGCCCTGA 58.963 43.478 0.00 0.00 0.00 3.86
1900 11186 0.034059 AACGCCAAGAGAGACACCAG 59.966 55.000 0.00 0.00 0.00 4.00
1931 11217 4.295051 CAACGATAAACAAAACCCAGTGG 58.705 43.478 0.63 0.63 37.80 4.00
1933 11219 3.634910 AGCAACGATAAACAAAACCCAGT 59.365 39.130 0.00 0.00 0.00 4.00
1935 11221 4.363999 CAAGCAACGATAAACAAAACCCA 58.636 39.130 0.00 0.00 0.00 4.51
1949 11235 0.523072 CAGAATGGTCCCAAGCAACG 59.477 55.000 0.00 0.00 36.29 4.10
1965 11251 1.549170 GTCCGTAAAAGGCTCCTCAGA 59.451 52.381 0.00 0.00 0.00 3.27
1966 11252 1.405661 GGTCCGTAAAAGGCTCCTCAG 60.406 57.143 0.00 0.00 0.00 3.35
1968 11254 0.107800 GGGTCCGTAAAAGGCTCCTC 60.108 60.000 0.00 0.00 0.00 3.71
1975 11261 2.389962 TTCATCCGGGTCCGTAAAAG 57.610 50.000 0.00 0.00 37.81 2.27
1986 11272 8.786898 ACATTAGACAATTATTCATTCATCCGG 58.213 33.333 0.00 0.00 0.00 5.14
2012 11302 5.417266 TGCATTTCTGAAATGGGTTCGATAA 59.583 36.000 32.63 8.08 46.47 1.75
2014 11304 3.763360 TGCATTTCTGAAATGGGTTCGAT 59.237 39.130 32.63 3.73 46.47 3.59
2017 11307 5.352293 GGAATTGCATTTCTGAAATGGGTTC 59.648 40.000 32.63 21.29 46.47 3.62
2023 11313 8.913487 AAAAGAAGGAATTGCATTTCTGAAAT 57.087 26.923 18.11 9.76 31.42 2.17
2031 11321 9.866798 GATAGAAAGAAAAGAAGGAATTGCATT 57.133 29.630 0.00 0.00 0.00 3.56
2069 11359 4.569719 ACCACTTGGGGTTTAGATGTAG 57.430 45.455 0.00 0.00 42.91 2.74
2090 11381 0.035152 ATGCCCGCATCACTCTGAAA 60.035 50.000 0.00 0.00 29.42 2.69
2162 11455 1.200020 GAGTTTTTCGCCATCCCTGTG 59.800 52.381 0.00 0.00 0.00 3.66
2163 11456 1.534729 GAGTTTTTCGCCATCCCTGT 58.465 50.000 0.00 0.00 0.00 4.00
2423 11741 4.427096 TGAGAGAGAGCAGTTTACGAAG 57.573 45.455 0.00 0.00 0.00 3.79
2530 11850 4.462834 AGTCGATGACTTCACTGGTTGATA 59.537 41.667 0.00 0.00 40.28 2.15
2543 11863 4.219507 ACACATTGAGAGAAGTCGATGACT 59.780 41.667 7.88 0.00 45.64 3.41
2547 11867 4.460731 TCAGACACATTGAGAGAAGTCGAT 59.539 41.667 0.00 0.00 0.00 3.59
2557 11877 6.857964 GGTTGTAATGTTTCAGACACATTGAG 59.142 38.462 20.74 0.00 43.31 3.02
2558 11878 6.545666 AGGTTGTAATGTTTCAGACACATTGA 59.454 34.615 20.74 8.07 43.31 2.57
2604 11930 1.534729 GGTTACAACCTTGGAGCAGG 58.465 55.000 3.80 0.00 45.75 4.85
2670 11997 5.964758 TGGCAAGCTACTTTGATTTATTGG 58.035 37.500 0.00 0.00 0.00 3.16
2679 12006 7.798516 CGTATACATAAATGGCAAGCTACTTTG 59.201 37.037 3.32 0.00 0.00 2.77
2682 12009 5.932303 CCGTATACATAAATGGCAAGCTACT 59.068 40.000 3.32 0.00 0.00 2.57
2704 13366 4.090138 TGCTAACATTTTGCACATACCG 57.910 40.909 0.00 0.00 0.00 4.02
2759 13421 3.074412 ACAATTTACAGAAGGCGTCCAG 58.926 45.455 0.00 0.00 0.00 3.86
2761 13423 2.812011 ACACAATTTACAGAAGGCGTCC 59.188 45.455 0.00 0.00 0.00 4.79
2803 13471 5.297569 AGACAGACCAGAGCTTAAAAGTT 57.702 39.130 0.00 0.00 0.00 2.66
2805 13473 4.083590 GCAAGACAGACCAGAGCTTAAAAG 60.084 45.833 0.00 0.00 0.00 2.27
2851 13533 4.142038 TCTGTCACTGTGAGCTGTAAGTA 58.858 43.478 11.41 0.00 35.30 2.24
2932 13616 2.028420 TGATGAACTGCATTCCTCGG 57.972 50.000 0.00 0.00 37.34 4.63
2934 13618 2.096496 CCGTTGATGAACTGCATTCCTC 59.904 50.000 0.00 0.00 37.34 3.71
2935 13619 2.086869 CCGTTGATGAACTGCATTCCT 58.913 47.619 0.00 0.00 37.34 3.36
2978 13662 3.551846 GTTTCACTCCCTCAAGGAACAA 58.448 45.455 0.00 0.00 46.94 2.83
2990 13674 4.143009 GCTTCTTCATTCTCGTTTCACTCC 60.143 45.833 0.00 0.00 0.00 3.85
3003 13687 2.228343 GCTTGTGCTCTGCTTCTTCATT 59.772 45.455 0.00 0.00 36.03 2.57
3015 13699 4.021925 ACGAGGGGGCTTGTGCTC 62.022 66.667 0.00 0.00 39.42 4.26
3037 13721 3.326588 TGCATAGGTTGACAGGTTGTAGT 59.673 43.478 0.00 0.00 0.00 2.73
3074 13758 7.537715 CATGGCAAGTGTGTTTATTCTAATGA 58.462 34.615 0.00 0.00 0.00 2.57
3100 13787 3.122780 TCATGCAGTATCGTGAACAAACG 59.877 43.478 0.00 0.00 44.92 3.60
3108 13795 4.863152 TCAAACATCATGCAGTATCGTG 57.137 40.909 0.00 0.00 0.00 4.35
3164 13851 3.454371 TTTCTCCATAAGCGGCTAGAC 57.546 47.619 1.35 0.00 0.00 2.59
3245 13932 3.249189 AGAGGGGGCTTTCACGCA 61.249 61.111 0.00 0.00 0.00 5.24
3246 13933 2.436824 GAGAGGGGGCTTTCACGC 60.437 66.667 0.00 0.00 0.00 5.34
3283 13970 9.277783 GTTCCAAAGATATATTAGTGTCTGCAT 57.722 33.333 0.00 0.00 0.00 3.96
3284 13971 8.264347 TGTTCCAAAGATATATTAGTGTCTGCA 58.736 33.333 0.00 0.00 0.00 4.41
3314 14001 8.547894 GCGATGTAGATATTGATGTGTTTAACA 58.452 33.333 0.00 0.00 44.79 2.41
3315 14002 8.765219 AGCGATGTAGATATTGATGTGTTTAAC 58.235 33.333 0.00 0.00 0.00 2.01
3316 14003 8.764287 CAGCGATGTAGATATTGATGTGTTTAA 58.236 33.333 0.00 0.00 0.00 1.52
3317 14004 7.384932 CCAGCGATGTAGATATTGATGTGTTTA 59.615 37.037 0.00 0.00 0.00 2.01
3318 14005 6.203530 CCAGCGATGTAGATATTGATGTGTTT 59.796 38.462 0.00 0.00 0.00 2.83
3321 14008 4.092529 GCCAGCGATGTAGATATTGATGTG 59.907 45.833 0.00 0.00 0.00 3.21
3322 14009 4.248859 GCCAGCGATGTAGATATTGATGT 58.751 43.478 0.00 0.00 0.00 3.06
3323 14010 4.248058 TGCCAGCGATGTAGATATTGATG 58.752 43.478 0.00 0.00 0.00 3.07
3325 14012 3.573967 TCTGCCAGCGATGTAGATATTGA 59.426 43.478 0.00 0.00 0.00 2.57
3327 14014 4.815533 ATCTGCCAGCGATGTAGATATT 57.184 40.909 13.81 0.00 0.00 1.28
3328 14015 5.832595 AGATATCTGCCAGCGATGTAGATAT 59.167 40.000 25.16 25.16 41.36 1.63
3329 14016 5.196695 AGATATCTGCCAGCGATGTAGATA 58.803 41.667 20.15 20.15 35.53 1.98
3330 14017 4.022603 AGATATCTGCCAGCGATGTAGAT 58.977 43.478 17.85 17.85 33.15 1.98
3331 14018 3.425659 AGATATCTGCCAGCGATGTAGA 58.574 45.455 3.89 3.49 0.00 2.59
3332 14019 3.428725 GGAGATATCTGCCAGCGATGTAG 60.429 52.174 10.74 0.00 0.00 2.74
3334 14021 1.274728 GGAGATATCTGCCAGCGATGT 59.725 52.381 10.74 1.79 0.00 3.06
3335 14022 1.274447 TGGAGATATCTGCCAGCGATG 59.726 52.381 20.22 0.00 32.95 3.84
3336 14023 1.637338 TGGAGATATCTGCCAGCGAT 58.363 50.000 20.22 3.28 32.95 4.58
3339 14026 2.354906 CCTCATGGAGATATCTGCCAGC 60.355 54.545 20.22 1.00 34.74 4.85
3340 14027 2.354906 GCCTCATGGAGATATCTGCCAG 60.355 54.545 20.22 12.95 34.74 4.85
3341 14028 1.627329 GCCTCATGGAGATATCTGCCA 59.373 52.381 20.22 19.93 35.91 4.92
3342 14029 1.405256 CGCCTCATGGAGATATCTGCC 60.405 57.143 20.22 15.61 34.95 4.85
3343 14030 2.006056 GCGCCTCATGGAGATATCTGC 61.006 57.143 16.76 16.76 34.95 4.26
3344 14031 1.274447 TGCGCCTCATGGAGATATCTG 59.726 52.381 10.74 0.00 34.95 2.90
3345 14032 1.637338 TGCGCCTCATGGAGATATCT 58.363 50.000 4.47 4.47 34.95 1.98
3346 14033 2.168106 AGATGCGCCTCATGGAGATATC 59.832 50.000 15.26 1.78 35.05 1.63
3347 14034 2.093606 CAGATGCGCCTCATGGAGATAT 60.094 50.000 15.26 0.00 35.05 1.63
3349 14036 0.035036 CAGATGCGCCTCATGGAGAT 59.965 55.000 15.26 0.00 35.05 2.75
3351 14038 1.597302 CCAGATGCGCCTCATGGAG 60.597 63.158 19.12 4.50 35.05 3.86
3353 14040 0.179048 TAACCAGATGCGCCTCATGG 60.179 55.000 20.92 20.92 35.05 3.66
3354 14041 1.224075 CTAACCAGATGCGCCTCATG 58.776 55.000 15.26 9.67 35.05 3.07
3355 14042 0.107456 CCTAACCAGATGCGCCTCAT 59.893 55.000 15.26 0.00 38.32 2.90
3356 14043 1.264749 ACCTAACCAGATGCGCCTCA 61.265 55.000 15.26 0.00 0.00 3.86
3358 14045 0.753262 CTACCTAACCAGATGCGCCT 59.247 55.000 4.18 0.00 0.00 5.52
3359 14046 0.464452 ACTACCTAACCAGATGCGCC 59.536 55.000 4.18 0.00 0.00 6.53
3361 14048 4.338682 ACTCTAACTACCTAACCAGATGCG 59.661 45.833 0.00 0.00 0.00 4.73
3362 14049 5.855740 ACTCTAACTACCTAACCAGATGC 57.144 43.478 0.00 0.00 0.00 3.91
3394 14081 9.959721 GAGGTAGAGATAAGAGATACAAGAGAT 57.040 37.037 0.00 0.00 0.00 2.75
3395 14082 8.380099 GGAGGTAGAGATAAGAGATACAAGAGA 58.620 40.741 0.00 0.00 0.00 3.10
3399 14086 9.357161 GAAAGGAGGTAGAGATAAGAGATACAA 57.643 37.037 0.00 0.00 0.00 2.41
3400 14087 8.729047 AGAAAGGAGGTAGAGATAAGAGATACA 58.271 37.037 0.00 0.00 0.00 2.29
3401 14088 9.582648 AAGAAAGGAGGTAGAGATAAGAGATAC 57.417 37.037 0.00 0.00 0.00 2.24
3408 14095 9.369672 GGAGATAAAGAAAGGAGGTAGAGATAA 57.630 37.037 0.00 0.00 0.00 1.75
3409 14096 8.511969 TGGAGATAAAGAAAGGAGGTAGAGATA 58.488 37.037 0.00 0.00 0.00 1.98
3410 14097 7.366226 TGGAGATAAAGAAAGGAGGTAGAGAT 58.634 38.462 0.00 0.00 0.00 2.75
3411 14098 6.742756 TGGAGATAAAGAAAGGAGGTAGAGA 58.257 40.000 0.00 0.00 0.00 3.10
3412 14099 7.343316 TCTTGGAGATAAAGAAAGGAGGTAGAG 59.657 40.741 0.00 0.00 30.79 2.43
3413 14100 7.189794 TCTTGGAGATAAAGAAAGGAGGTAGA 58.810 38.462 0.00 0.00 30.79 2.59
3415 14102 7.808279 TTCTTGGAGATAAAGAAAGGAGGTA 57.192 36.000 0.00 0.00 39.94 3.08
3416 14103 6.704056 TTCTTGGAGATAAAGAAAGGAGGT 57.296 37.500 0.00 0.00 39.94 3.85
3417 14104 7.115414 ACATTCTTGGAGATAAAGAAAGGAGG 58.885 38.462 2.99 0.00 44.49 4.30
3418 14105 9.672673 TTACATTCTTGGAGATAAAGAAAGGAG 57.327 33.333 2.99 0.00 44.49 3.69
3426 14113 9.396022 GGTTGAGATTACATTCTTGGAGATAAA 57.604 33.333 0.00 0.00 0.00 1.40
3427 14114 8.548025 TGGTTGAGATTACATTCTTGGAGATAA 58.452 33.333 0.00 0.00 0.00 1.75
3428 14115 8.089625 TGGTTGAGATTACATTCTTGGAGATA 57.910 34.615 0.00 0.00 0.00 1.98
3429 14116 6.962182 TGGTTGAGATTACATTCTTGGAGAT 58.038 36.000 0.00 0.00 0.00 2.75
3431 14118 7.452880 TTTGGTTGAGATTACATTCTTGGAG 57.547 36.000 0.00 0.00 0.00 3.86
3433 14120 7.605449 ACATTTGGTTGAGATTACATTCTTGG 58.395 34.615 0.00 0.00 0.00 3.61
3436 14123 8.408601 GCATACATTTGGTTGAGATTACATTCT 58.591 33.333 0.00 0.00 0.00 2.40
3437 14124 7.376866 CGCATACATTTGGTTGAGATTACATTC 59.623 37.037 0.00 0.00 0.00 2.67
3439 14126 6.728200 CGCATACATTTGGTTGAGATTACAT 58.272 36.000 0.00 0.00 0.00 2.29
3440 14127 5.448496 GCGCATACATTTGGTTGAGATTACA 60.448 40.000 0.30 0.00 0.00 2.41
3441 14128 4.970003 GCGCATACATTTGGTTGAGATTAC 59.030 41.667 0.30 0.00 0.00 1.89
3442 14129 4.881273 AGCGCATACATTTGGTTGAGATTA 59.119 37.500 11.47 0.00 0.00 1.75
3443 14130 3.696051 AGCGCATACATTTGGTTGAGATT 59.304 39.130 11.47 0.00 0.00 2.40
3444 14131 3.065786 CAGCGCATACATTTGGTTGAGAT 59.934 43.478 11.47 0.00 0.00 2.75
3447 14134 2.158559 ACAGCGCATACATTTGGTTGA 58.841 42.857 11.47 0.00 0.00 3.18
3449 14136 4.439974 CCATAACAGCGCATACATTTGGTT 60.440 41.667 11.47 2.18 0.00 3.67
3450 14137 3.066621 CCATAACAGCGCATACATTTGGT 59.933 43.478 11.47 0.00 0.00 3.67
3452 14139 3.314913 TCCCATAACAGCGCATACATTTG 59.685 43.478 11.47 0.00 0.00 2.32
3453 14140 3.550820 TCCCATAACAGCGCATACATTT 58.449 40.909 11.47 0.00 0.00 2.32
3454 14141 3.141398 CTCCCATAACAGCGCATACATT 58.859 45.455 11.47 0.00 0.00 2.71
3455 14142 2.550855 CCTCCCATAACAGCGCATACAT 60.551 50.000 11.47 0.00 0.00 2.29
3456 14143 1.202639 CCTCCCATAACAGCGCATACA 60.203 52.381 11.47 0.00 0.00 2.29
3458 14145 1.128200 ACCTCCCATAACAGCGCATA 58.872 50.000 11.47 0.00 0.00 3.14
3459 14146 0.464373 CACCTCCCATAACAGCGCAT 60.464 55.000 11.47 0.00 0.00 4.73
3460 14147 1.078497 CACCTCCCATAACAGCGCA 60.078 57.895 11.47 0.00 0.00 6.09
3461 14148 1.078426 ACACCTCCCATAACAGCGC 60.078 57.895 0.00 0.00 0.00 5.92
3462 14149 1.369091 GCACACCTCCCATAACAGCG 61.369 60.000 0.00 0.00 0.00 5.18
3463 14150 1.032114 GGCACACCTCCCATAACAGC 61.032 60.000 0.00 0.00 0.00 4.40
3464 14151 0.394352 GGGCACACCTCCCATAACAG 60.394 60.000 0.00 0.00 43.37 3.16
3465 14152 1.688811 GGGCACACCTCCCATAACA 59.311 57.895 0.00 0.00 43.37 2.41
3471 14158 1.062488 ATAGATGGGGCACACCTCCC 61.062 60.000 0.00 0.00 43.42 4.30
3474 14161 4.041691 GTGTTATATAGATGGGGCACACCT 59.958 45.833 0.00 0.00 40.03 4.00
3477 14164 3.898741 TCGTGTTATATAGATGGGGCACA 59.101 43.478 0.00 0.00 0.00 4.57
3479 14166 4.562757 GCTTCGTGTTATATAGATGGGGCA 60.563 45.833 0.00 0.00 0.00 5.36
3482 14169 5.147330 TGGCTTCGTGTTATATAGATGGG 57.853 43.478 0.00 0.00 0.00 4.00
3483 14170 5.516696 CGATGGCTTCGTGTTATATAGATGG 59.483 44.000 13.99 0.00 43.01 3.51
3484 14171 5.516696 CCGATGGCTTCGTGTTATATAGATG 59.483 44.000 19.54 0.00 46.65 2.90
3485 14172 5.651530 CCGATGGCTTCGTGTTATATAGAT 58.348 41.667 19.54 0.00 46.65 1.98
3486 14173 4.617530 GCCGATGGCTTCGTGTTATATAGA 60.618 45.833 19.54 0.00 46.69 1.98
3487 14174 3.612860 GCCGATGGCTTCGTGTTATATAG 59.387 47.826 19.54 4.26 46.69 1.31
3488 14175 3.581755 GCCGATGGCTTCGTGTTATATA 58.418 45.455 19.54 0.00 46.69 0.86
3489 14176 2.413837 GCCGATGGCTTCGTGTTATAT 58.586 47.619 19.54 0.00 46.69 0.86
3490 14177 1.860676 GCCGATGGCTTCGTGTTATA 58.139 50.000 19.54 0.00 46.69 0.98
3491 14178 2.690326 GCCGATGGCTTCGTGTTAT 58.310 52.632 19.54 0.00 46.69 1.89
3492 14179 4.195308 GCCGATGGCTTCGTGTTA 57.805 55.556 19.54 0.00 46.69 2.41
3510 14197 1.433534 GGAACGTCTTGCCTTCTCAG 58.566 55.000 0.00 0.00 0.00 3.35
3511 14198 3.606886 GGAACGTCTTGCCTTCTCA 57.393 52.632 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.