Multiple sequence alignment - TraesCS7A01G544300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G544300 chr7A 100.000 4018 0 0 1 4018 720915424 720911407 0.000000e+00 7420
1 TraesCS7A01G544300 chr7A 84.380 1210 104 41 328 1505 720940972 720939816 0.000000e+00 1109
2 TraesCS7A01G544300 chr7A 86.836 828 98 7 2296 3120 720934295 720933476 0.000000e+00 915
3 TraesCS7A01G544300 chr7A 85.345 116 10 4 558 669 720922732 720922620 3.280000e-21 113
4 TraesCS7A01G544300 chr7D 87.686 2485 191 54 798 3245 625205877 625208283 0.000000e+00 2787
5 TraesCS7A01G544300 chr7D 86.512 734 99 0 2296 3029 625189574 625190307 0.000000e+00 808
6 TraesCS7A01G544300 chr7D 82.674 860 75 36 328 1163 625174194 625175003 0.000000e+00 695
7 TraesCS7A01G544300 chr7D 88.580 324 27 5 6 329 625204401 625204714 6.300000e-103 385
8 TraesCS7A01G544300 chr7D 81.061 528 46 16 3241 3716 625208327 625208852 4.900000e-99 372
9 TraesCS7A01G544300 chr7D 81.379 435 54 17 1061 1491 625347613 625347202 2.990000e-86 329
10 TraesCS7A01G544300 chr7D 85.401 274 34 3 997 1264 625143238 625143511 3.060000e-71 279
11 TraesCS7A01G544300 chr7D 76.759 469 55 26 328 783 625205395 625205822 3.150000e-51 213
12 TraesCS7A01G544300 chr7B 86.969 2379 203 51 800 3117 723957593 723955261 0.000000e+00 2577
13 TraesCS7A01G544300 chr7B 87.363 728 88 3 2304 3029 723934353 723933628 0.000000e+00 832
14 TraesCS7A01G544300 chr7B 83.792 944 72 30 586 1505 723936199 723935313 0.000000e+00 821
15 TraesCS7A01G544300 chr7B 81.733 427 55 15 1069 1493 724939665 724939260 6.430000e-88 335
16 TraesCS7A01G544300 chr7B 86.142 267 22 5 328 587 723958163 723957905 1.420000e-69 274
17 TraesCS7A01G544300 chr7B 85.338 266 33 2 997 1256 724002345 724002080 1.840000e-68 270
18 TraesCS7A01G544300 chr7B 85.338 266 26 3 330 589 723936905 723936647 3.080000e-66 263
19 TraesCS7A01G544300 chr7B 89.655 116 8 2 558 669 723940975 723940860 1.160000e-30 145
20 TraesCS7A01G544300 chr3B 94.643 112 4 2 3907 4018 671134419 671134310 5.340000e-39 172
21 TraesCS7A01G544300 chr3D 95.283 106 3 2 3914 4018 586895193 586895089 2.480000e-37 167
22 TraesCS7A01G544300 chr3D 96.907 97 3 0 3922 4018 123691658 123691562 3.210000e-36 163
23 TraesCS7A01G544300 chr5A 95.238 105 3 2 3914 4018 606179041 606179143 8.930000e-37 165
24 TraesCS7A01G544300 chr2D 95.192 104 4 1 3915 4018 484074777 484074879 3.210000e-36 163
25 TraesCS7A01G544300 chr2D 85.246 122 13 3 3301 3417 79686470 79686349 1.960000e-23 121
26 TraesCS7A01G544300 chr2D 82.787 122 16 3 3301 3417 42934040 42934161 1.980000e-18 104
27 TraesCS7A01G544300 chr2D 82.787 122 16 3 3301 3417 79874249 79874128 1.980000e-18 104
28 TraesCS7A01G544300 chr4B 94.286 105 5 1 3914 4018 634310748 634310645 4.160000e-35 159
29 TraesCS7A01G544300 chr4A 96.842 95 3 0 3924 4018 81265234 81265140 4.160000e-35 159
30 TraesCS7A01G544300 chr2B 96.842 95 3 0 3924 4018 741150505 741150599 4.160000e-35 159
31 TraesCS7A01G544300 chr2B 92.105 114 6 2 3905 4018 21536752 21536642 1.490000e-34 158
32 TraesCS7A01G544300 chr2B 84.426 122 14 3 3301 3417 131180524 131180403 9.130000e-22 115
33 TraesCS7A01G544300 chr2B 82.787 122 16 3 3301 3417 131286627 131286506 1.980000e-18 104
34 TraesCS7A01G544300 chr2A 85.246 122 13 3 3301 3417 80264471 80264350 1.960000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G544300 chr7A 720911407 720915424 4017 True 7420.00 7420 100.0000 1 4018 1 chr7A.!!$R1 4017
1 TraesCS7A01G544300 chr7A 720939816 720940972 1156 True 1109.00 1109 84.3800 328 1505 1 chr7A.!!$R4 1177
2 TraesCS7A01G544300 chr7A 720933476 720934295 819 True 915.00 915 86.8360 2296 3120 1 chr7A.!!$R3 824
3 TraesCS7A01G544300 chr7D 625204401 625208852 4451 False 939.25 2787 83.5215 6 3716 4 chr7D.!!$F4 3710
4 TraesCS7A01G544300 chr7D 625189574 625190307 733 False 808.00 808 86.5120 2296 3029 1 chr7D.!!$F3 733
5 TraesCS7A01G544300 chr7D 625174194 625175003 809 False 695.00 695 82.6740 328 1163 1 chr7D.!!$F2 835
6 TraesCS7A01G544300 chr7B 723955261 723958163 2902 True 1425.50 2577 86.5555 328 3117 2 chr7B.!!$R4 2789
7 TraesCS7A01G544300 chr7B 723933628 723940975 7347 True 515.25 832 86.5370 330 3029 4 chr7B.!!$R3 2699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 315 0.098728 CCATAAAAAGGACCAGCGCG 59.901 55.0 0.00 0.00 0.00 6.86 F
315 316 0.523335 CATAAAAAGGACCAGCGCGC 60.523 55.0 26.66 26.66 0.00 6.86 F
1836 6422 0.179040 GAACGTGGAACCAGGAACCA 60.179 55.0 18.36 0.00 35.94 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 6397 0.535102 CTGGTTCCACGTTCCAGCTT 60.535 55.0 11.19 0.00 41.46 3.74 R
2291 7071 0.771756 CGTTCTGCATGCAAAACACG 59.228 50.0 30.52 24.76 28.23 4.49 R
3458 8325 0.108992 TCGTATGCCAGGTTCGTGAC 60.109 55.0 0.00 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 4.039124 AGAAATCCAAACTTTGTTGCCGAT 59.961 37.500 0.88 0.00 0.00 4.18
43 44 3.575965 ATCCAAACTTTGTTGCCGATC 57.424 42.857 0.88 0.00 0.00 3.69
44 45 1.611491 TCCAAACTTTGTTGCCGATCC 59.389 47.619 0.88 0.00 0.00 3.36
45 46 1.613437 CCAAACTTTGTTGCCGATCCT 59.387 47.619 0.88 0.00 0.00 3.24
48 49 2.496899 ACTTTGTTGCCGATCCTGAT 57.503 45.000 0.00 0.00 0.00 2.90
50 51 3.157087 ACTTTGTTGCCGATCCTGATTT 58.843 40.909 0.00 0.00 0.00 2.17
51 52 3.573967 ACTTTGTTGCCGATCCTGATTTT 59.426 39.130 0.00 0.00 0.00 1.82
60 61 4.158579 GCCGATCCTGATTTTTCTTTCCTT 59.841 41.667 0.00 0.00 0.00 3.36
87 88 7.892778 TTTGTTTAACCCACAAGAAAGAAAC 57.107 32.000 0.00 0.00 35.57 2.78
88 89 6.844097 TGTTTAACCCACAAGAAAGAAACT 57.156 33.333 0.00 0.00 0.00 2.66
89 90 7.234661 TGTTTAACCCACAAGAAAGAAACTT 57.765 32.000 0.00 0.00 0.00 2.66
91 92 8.151596 TGTTTAACCCACAAGAAAGAAACTTTT 58.848 29.630 0.00 0.00 0.00 2.27
105 106 4.966249 GAAACTTTTCTTCGGAATACCGG 58.034 43.478 0.00 0.00 44.83 5.28
106 107 4.453478 GAAACTTTTCTTCGGAATACCGGT 59.547 41.667 13.98 13.98 44.83 5.28
107 108 5.390251 GAAACTTTTCTTCGGAATACCGGTC 60.390 44.000 12.40 0.00 44.83 4.79
108 109 7.724531 GAAACTTTTCTTCGGAATACCGGTCA 61.725 42.308 12.40 0.00 44.83 4.02
109 110 9.613919 GAAACTTTTCTTCGGAATACCGGTCAC 62.614 44.444 12.40 3.34 44.83 3.67
118 119 4.315803 GGAATACCGGTCACTTCCATATG 58.684 47.826 26.70 0.00 37.65 1.78
119 120 2.902705 TACCGGTCACTTCCATATGC 57.097 50.000 12.40 0.00 0.00 3.14
120 121 0.179084 ACCGGTCACTTCCATATGCG 60.179 55.000 0.00 0.00 0.00 4.73
121 122 0.179084 CCGGTCACTTCCATATGCGT 60.179 55.000 0.00 0.00 0.00 5.24
122 123 1.209128 CGGTCACTTCCATATGCGTC 58.791 55.000 0.00 0.00 0.00 5.19
124 125 1.470979 GGTCACTTCCATATGCGTCGT 60.471 52.381 0.00 0.00 0.00 4.34
125 126 1.852895 GTCACTTCCATATGCGTCGTC 59.147 52.381 0.00 0.00 0.00 4.20
126 127 0.846401 CACTTCCATATGCGTCGTCG 59.154 55.000 0.00 0.00 40.37 5.12
138 139 2.453650 CGTCGTCGCTCTGAGATAAA 57.546 50.000 9.28 0.00 0.00 1.40
140 141 4.129878 CGTCGTCGCTCTGAGATAAATA 57.870 45.455 9.28 0.00 0.00 1.40
143 144 5.625721 CGTCGTCGCTCTGAGATAAATATTT 59.374 40.000 9.28 5.89 0.00 1.40
144 145 6.183359 CGTCGTCGCTCTGAGATAAATATTTC 60.183 42.308 9.28 0.00 0.00 2.17
145 146 6.858993 GTCGTCGCTCTGAGATAAATATTTCT 59.141 38.462 9.28 0.00 0.00 2.52
146 147 7.380065 GTCGTCGCTCTGAGATAAATATTTCTT 59.620 37.037 9.28 0.00 0.00 2.52
147 148 7.921214 TCGTCGCTCTGAGATAAATATTTCTTT 59.079 33.333 9.28 0.00 0.00 2.52
148 149 8.000991 CGTCGCTCTGAGATAAATATTTCTTTG 58.999 37.037 9.28 0.00 0.00 2.77
149 150 9.035607 GTCGCTCTGAGATAAATATTTCTTTGA 57.964 33.333 9.28 0.00 0.00 2.69
151 152 8.820933 CGCTCTGAGATAAATATTTCTTTGACA 58.179 33.333 9.28 0.00 0.00 3.58
159 160 9.834628 GATAAATATTTCTTTGACAAACGACCA 57.165 29.630 3.39 0.00 0.00 4.02
161 162 8.519492 AAATATTTCTTTGACAAACGACCATG 57.481 30.769 0.00 0.00 0.00 3.66
162 163 5.766150 ATTTCTTTGACAAACGACCATGA 57.234 34.783 0.00 0.00 0.00 3.07
163 164 5.568685 TTTCTTTGACAAACGACCATGAA 57.431 34.783 0.00 0.00 0.00 2.57
164 165 4.811555 TCTTTGACAAACGACCATGAAG 57.188 40.909 0.00 0.00 0.00 3.02
165 166 4.447290 TCTTTGACAAACGACCATGAAGA 58.553 39.130 0.00 0.00 0.00 2.87
167 168 5.355630 TCTTTGACAAACGACCATGAAGAAA 59.644 36.000 0.00 0.00 0.00 2.52
169 170 5.568685 TGACAAACGACCATGAAGAAAAA 57.431 34.783 0.00 0.00 0.00 1.94
170 171 6.142818 TGACAAACGACCATGAAGAAAAAT 57.857 33.333 0.00 0.00 0.00 1.82
171 172 6.205784 TGACAAACGACCATGAAGAAAAATC 58.794 36.000 0.00 0.00 0.00 2.17
173 174 5.008217 ACAAACGACCATGAAGAAAAATCGA 59.992 36.000 0.00 0.00 32.63 3.59
174 175 4.928661 ACGACCATGAAGAAAAATCGAG 57.071 40.909 0.00 0.00 32.63 4.04
176 177 4.389077 ACGACCATGAAGAAAAATCGAGTC 59.611 41.667 0.00 0.00 32.63 3.36
178 179 5.445142 CGACCATGAAGAAAAATCGAGTCTG 60.445 44.000 0.00 0.00 0.00 3.51
179 180 4.697352 ACCATGAAGAAAAATCGAGTCTGG 59.303 41.667 0.00 0.00 0.00 3.86
180 181 4.095483 CCATGAAGAAAAATCGAGTCTGGG 59.905 45.833 0.00 0.00 0.00 4.45
181 182 3.074412 TGAAGAAAAATCGAGTCTGGGC 58.926 45.455 0.00 0.00 0.00 5.36
182 183 2.859165 AGAAAAATCGAGTCTGGGCA 57.141 45.000 0.00 0.00 0.00 5.36
183 184 3.356529 AGAAAAATCGAGTCTGGGCAT 57.643 42.857 0.00 0.00 0.00 4.40
184 185 4.487714 AGAAAAATCGAGTCTGGGCATA 57.512 40.909 0.00 0.00 0.00 3.14
185 186 4.446371 AGAAAAATCGAGTCTGGGCATAG 58.554 43.478 0.00 0.00 0.00 2.23
186 187 2.246719 AAATCGAGTCTGGGCATAGC 57.753 50.000 0.00 0.00 0.00 2.97
187 188 1.123077 AATCGAGTCTGGGCATAGCA 58.877 50.000 0.00 0.00 0.00 3.49
188 189 1.346062 ATCGAGTCTGGGCATAGCAT 58.654 50.000 0.00 0.00 0.00 3.79
189 190 1.123077 TCGAGTCTGGGCATAGCATT 58.877 50.000 0.00 0.00 0.00 3.56
192 193 3.062763 CGAGTCTGGGCATAGCATTTAG 58.937 50.000 0.00 0.00 0.00 1.85
193 194 3.493350 CGAGTCTGGGCATAGCATTTAGT 60.493 47.826 0.00 0.00 0.00 2.24
195 196 4.860022 AGTCTGGGCATAGCATTTAGTTT 58.140 39.130 0.00 0.00 0.00 2.66
196 197 4.884164 AGTCTGGGCATAGCATTTAGTTTC 59.116 41.667 0.00 0.00 0.00 2.78
197 198 4.640201 GTCTGGGCATAGCATTTAGTTTCA 59.360 41.667 0.00 0.00 0.00 2.69
198 199 4.883585 TCTGGGCATAGCATTTAGTTTCAG 59.116 41.667 0.00 0.00 0.00 3.02
199 200 4.599041 TGGGCATAGCATTTAGTTTCAGT 58.401 39.130 0.00 0.00 0.00 3.41
200 201 5.750524 TGGGCATAGCATTTAGTTTCAGTA 58.249 37.500 0.00 0.00 0.00 2.74
203 204 6.486657 GGGCATAGCATTTAGTTTCAGTATCA 59.513 38.462 0.00 0.00 0.00 2.15
205 206 7.074502 GCATAGCATTTAGTTTCAGTATCAGC 58.925 38.462 0.00 0.00 0.00 4.26
206 207 7.579726 CATAGCATTTAGTTTCAGTATCAGCC 58.420 38.462 0.00 0.00 0.00 4.85
207 208 4.572389 AGCATTTAGTTTCAGTATCAGCCG 59.428 41.667 0.00 0.00 0.00 5.52
208 209 4.332819 GCATTTAGTTTCAGTATCAGCCGT 59.667 41.667 0.00 0.00 0.00 5.68
209 210 5.163754 GCATTTAGTTTCAGTATCAGCCGTT 60.164 40.000 0.00 0.00 0.00 4.44
210 211 5.856126 TTTAGTTTCAGTATCAGCCGTTG 57.144 39.130 0.00 0.00 0.00 4.10
211 212 2.076863 AGTTTCAGTATCAGCCGTTGC 58.923 47.619 0.00 0.00 37.95 4.17
212 213 1.804151 GTTTCAGTATCAGCCGTTGCA 59.196 47.619 0.00 0.00 41.13 4.08
215 216 1.066215 TCAGTATCAGCCGTTGCATGT 60.066 47.619 0.00 0.00 41.13 3.21
216 217 1.739466 CAGTATCAGCCGTTGCATGTT 59.261 47.619 0.00 0.00 41.13 2.71
217 218 2.162208 CAGTATCAGCCGTTGCATGTTT 59.838 45.455 0.00 0.00 41.13 2.83
220 221 1.598882 TCAGCCGTTGCATGTTTGTA 58.401 45.000 0.00 0.00 41.13 2.41
221 222 1.535028 TCAGCCGTTGCATGTTTGTAG 59.465 47.619 0.00 0.00 41.13 2.74
223 224 2.031245 CAGCCGTTGCATGTTTGTAGAA 60.031 45.455 0.00 0.00 41.13 2.10
224 225 2.031157 AGCCGTTGCATGTTTGTAGAAC 60.031 45.455 0.00 0.00 41.13 3.01
228 229 5.753744 CCGTTGCATGTTTGTAGAACTAAA 58.246 37.500 0.00 0.00 0.00 1.85
229 230 6.202937 CCGTTGCATGTTTGTAGAACTAAAA 58.797 36.000 0.00 0.00 0.00 1.52
230 231 6.359617 CCGTTGCATGTTTGTAGAACTAAAAG 59.640 38.462 0.00 0.00 0.00 2.27
231 232 6.129457 CGTTGCATGTTTGTAGAACTAAAAGC 60.129 38.462 0.00 0.00 0.00 3.51
232 233 6.384258 TGCATGTTTGTAGAACTAAAAGCA 57.616 33.333 4.33 4.33 30.02 3.91
233 234 6.800543 TGCATGTTTGTAGAACTAAAAGCAA 58.199 32.000 5.64 0.00 29.42 3.91
234 235 6.917477 TGCATGTTTGTAGAACTAAAAGCAAG 59.083 34.615 5.64 3.46 29.42 4.01
235 236 7.138736 GCATGTTTGTAGAACTAAAAGCAAGA 58.861 34.615 5.64 0.00 29.42 3.02
237 238 9.683069 CATGTTTGTAGAACTAAAAGCAAGAAT 57.317 29.630 5.64 0.00 29.42 2.40
269 270 9.410556 CCAAGTTAAAACATAAAGAACAGATGG 57.589 33.333 0.00 0.00 0.00 3.51
278 279 9.520515 AACATAAAGAACAGATGGTATTTGTCT 57.479 29.630 0.87 0.00 0.00 3.41
279 280 9.520515 ACATAAAGAACAGATGGTATTTGTCTT 57.479 29.630 0.87 0.00 0.00 3.01
280 281 9.778993 CATAAAGAACAGATGGTATTTGTCTTG 57.221 33.333 0.87 0.00 0.00 3.02
281 282 9.739276 ATAAAGAACAGATGGTATTTGTCTTGA 57.261 29.630 0.87 0.00 0.00 3.02
282 283 8.463930 AAAGAACAGATGGTATTTGTCTTGAA 57.536 30.769 0.00 0.00 0.00 2.69
283 284 8.463930 AAGAACAGATGGTATTTGTCTTGAAA 57.536 30.769 0.00 0.00 0.00 2.69
285 286 8.352942 AGAACAGATGGTATTTGTCTTGAAAAC 58.647 33.333 0.00 0.00 0.00 2.43
286 287 7.581213 ACAGATGGTATTTGTCTTGAAAACA 57.419 32.000 0.00 0.00 0.00 2.83
289 290 9.311916 CAGATGGTATTTGTCTTGAAAACAAAA 57.688 29.630 0.51 0.00 46.38 2.44
297 298 9.883142 ATTTGTCTTGAAAACAAAATAACTCCA 57.117 25.926 0.51 0.00 46.38 3.86
298 299 9.883142 TTTGTCTTGAAAACAAAATAACTCCAT 57.117 25.926 0.00 0.00 42.09 3.41
308 309 9.772973 AAACAAAATAACTCCATAAAAAGGACC 57.227 29.630 0.00 0.00 0.00 4.46
309 310 8.485578 ACAAAATAACTCCATAAAAAGGACCA 57.514 30.769 0.00 0.00 0.00 4.02
310 311 8.585018 ACAAAATAACTCCATAAAAAGGACCAG 58.415 33.333 0.00 0.00 0.00 4.00
311 312 6.775594 AATAACTCCATAAAAAGGACCAGC 57.224 37.500 0.00 0.00 0.00 4.85
312 313 2.711542 ACTCCATAAAAAGGACCAGCG 58.288 47.619 0.00 0.00 0.00 5.18
313 314 1.401905 CTCCATAAAAAGGACCAGCGC 59.598 52.381 0.00 0.00 0.00 5.92
314 315 0.098728 CCATAAAAAGGACCAGCGCG 59.901 55.000 0.00 0.00 0.00 6.86
315 316 0.523335 CATAAAAAGGACCAGCGCGC 60.523 55.000 26.66 26.66 0.00 6.86
316 317 0.958382 ATAAAAAGGACCAGCGCGCA 60.958 50.000 35.10 8.00 0.00 6.09
317 318 0.958382 TAAAAAGGACCAGCGCGCAT 60.958 50.000 35.10 18.73 0.00 4.73
318 319 2.200170 AAAAAGGACCAGCGCGCATC 62.200 55.000 35.10 25.60 0.00 3.91
325 326 3.481903 CAGCGCGCATCGTCACTT 61.482 61.111 35.10 5.73 41.07 3.16
327 328 2.276058 GCGCGCATCGTCACTTTC 60.276 61.111 29.10 0.00 41.07 2.62
328 329 2.395690 CGCGCATCGTCACTTTCC 59.604 61.111 8.75 0.00 0.00 3.13
329 330 2.395690 GCGCATCGTCACTTTCCG 59.604 61.111 0.30 0.00 0.00 4.30
330 331 2.092291 GCGCATCGTCACTTTCCGA 61.092 57.895 0.30 0.00 37.51 4.55
332 333 0.999406 CGCATCGTCACTTTCCGATT 59.001 50.000 0.00 0.00 41.54 3.34
333 334 1.267038 CGCATCGTCACTTTCCGATTG 60.267 52.381 0.00 0.00 41.54 2.67
345 4117 4.202202 ACTTTCCGATTGATCCAGCTCTAG 60.202 45.833 0.00 0.00 0.00 2.43
354 4126 7.363705 CGATTGATCCAGCTCTAGATTATCCTT 60.364 40.741 0.00 0.00 0.00 3.36
355 4128 6.602410 TGATCCAGCTCTAGATTATCCTTG 57.398 41.667 0.00 0.00 0.00 3.61
361 4134 7.770897 TCCAGCTCTAGATTATCCTTGTTTTTC 59.229 37.037 0.00 0.00 0.00 2.29
404 4179 4.269523 AGGCTGCCGCTGAAACCA 62.270 61.111 13.96 0.00 36.09 3.67
446 4227 4.100981 GCTCTCGGCTGCTACTTG 57.899 61.111 0.00 0.00 38.06 3.16
447 4228 2.170434 GCTCTCGGCTGCTACTTGC 61.170 63.158 0.00 0.00 43.25 4.01
448 4229 1.515020 CTCTCGGCTGCTACTTGCT 59.485 57.895 0.00 0.00 43.37 3.91
449 4230 0.741326 CTCTCGGCTGCTACTTGCTA 59.259 55.000 0.00 0.00 43.37 3.49
461 4242 4.303282 GCTACTTGCTAGCTCTACAATCC 58.697 47.826 17.23 0.00 44.24 3.01
508 4297 1.001048 TGTAGTTGCGCTGTAACGTCT 60.001 47.619 9.73 0.00 33.57 4.18
589 4395 6.708949 GTGTGGTTATCTCTAGAGAGTAGAGG 59.291 46.154 25.86 0.00 41.33 3.69
685 5032 5.873146 AAAGTGTAGTTATCTCTAGGGGC 57.127 43.478 0.00 0.00 0.00 5.80
686 5033 4.537945 AGTGTAGTTATCTCTAGGGGCA 57.462 45.455 0.00 0.00 0.00 5.36
687 5034 4.475345 AGTGTAGTTATCTCTAGGGGCAG 58.525 47.826 0.00 0.00 0.00 4.85
688 5035 4.079096 AGTGTAGTTATCTCTAGGGGCAGT 60.079 45.833 0.00 0.00 0.00 4.40
689 5036 4.650131 GTGTAGTTATCTCTAGGGGCAGTT 59.350 45.833 0.00 0.00 0.00 3.16
692 5039 4.104831 AGTTATCTCTAGGGGCAGTTGTT 58.895 43.478 0.00 0.00 0.00 2.83
733 5086 2.076100 TCCAGCATGCACTACTTTTCG 58.924 47.619 21.98 0.00 31.97 3.46
740 5093 1.001633 TGCACTACTTTTCGGAGGGAC 59.998 52.381 0.00 0.00 0.00 4.46
743 5096 0.801067 CTACTTTTCGGAGGGACGCG 60.801 60.000 3.53 3.53 0.00 6.01
794 5193 8.997621 TTTTATTAGCATATACTCCGACCATC 57.002 34.615 0.00 0.00 0.00 3.51
816 5215 2.924290 GCACTTTCGTTGACTAGCTAGG 59.076 50.000 24.35 6.66 0.00 3.02
947 5368 4.277672 CACACCTGTACTGTACTGTACTGT 59.722 45.833 30.96 26.40 42.22 3.55
948 5369 5.471116 CACACCTGTACTGTACTGTACTGTA 59.529 44.000 30.96 24.76 42.22 2.74
999 5423 3.449746 AGCTCGATCCCTAGATAAGCT 57.550 47.619 0.00 6.61 42.60 3.74
1023 5447 2.202324 GGTCTCGTCGTCGTGCTC 60.202 66.667 1.33 0.00 38.33 4.26
1024 5448 2.571096 GTCTCGTCGTCGTGCTCG 60.571 66.667 0.81 0.81 38.33 5.03
1239 5669 1.635663 GCAACGGCTACAACATCGCT 61.636 55.000 0.00 0.00 36.96 4.93
1289 5719 7.902387 ATATACATCATCATGTGCTCAGAAC 57.098 36.000 0.00 0.00 43.54 3.01
1290 5720 3.276857 ACATCATCATGTGCTCAGAACC 58.723 45.455 0.00 0.00 42.05 3.62
1420 5871 2.666317 TCTCGCAACTATCTCATCCCA 58.334 47.619 0.00 0.00 0.00 4.37
1427 5878 1.069823 ACTATCTCATCCCAAGCGCTG 59.930 52.381 12.58 5.12 0.00 5.18
1525 5980 6.683974 ACATTACATATGCTTGGTGAGTTC 57.316 37.500 1.58 0.00 0.00 3.01
1530 5985 9.935241 ATTACATATGCTTGGTGAGTTCTATAG 57.065 33.333 1.58 0.00 0.00 1.31
1541 5996 5.770663 GGTGAGTTCTATAGGTGCTAGATCA 59.229 44.000 0.00 0.00 0.00 2.92
1542 5997 6.072175 GGTGAGTTCTATAGGTGCTAGATCAG 60.072 46.154 0.00 0.00 0.00 2.90
1543 5998 6.007076 TGAGTTCTATAGGTGCTAGATCAGG 58.993 44.000 0.00 0.00 0.00 3.86
1544 5999 5.959512 AGTTCTATAGGTGCTAGATCAGGT 58.040 41.667 0.00 0.00 0.00 4.00
1551 6006 2.436173 GGTGCTAGATCAGGTAGCCTTT 59.564 50.000 9.32 0.00 42.00 3.11
1577 6032 1.009903 TTCGTGTACGGTTGGCATCG 61.010 55.000 4.44 8.81 40.29 3.84
1590 6045 2.789213 TGGCATCGATTTGTTCCAGAA 58.211 42.857 0.00 0.00 0.00 3.02
1599 6054 7.038154 TCGATTTGTTCCAGAAGATTTGTTT 57.962 32.000 0.00 0.00 0.00 2.83
1602 6057 7.860373 CGATTTGTTCCAGAAGATTTGTTTGTA 59.140 33.333 0.00 0.00 0.00 2.41
1603 6058 9.185192 GATTTGTTCCAGAAGATTTGTTTGTAG 57.815 33.333 0.00 0.00 0.00 2.74
1604 6059 6.633500 TGTTCCAGAAGATTTGTTTGTAGG 57.367 37.500 0.00 0.00 0.00 3.18
1605 6060 6.361433 TGTTCCAGAAGATTTGTTTGTAGGA 58.639 36.000 0.00 0.00 0.00 2.94
1644 6209 2.214376 CCATGTTTTGGTAGCAGGGA 57.786 50.000 0.00 0.00 40.99 4.20
1742 6328 8.359060 TCACAAAACAAAAATCTAAATTCCCG 57.641 30.769 0.00 0.00 0.00 5.14
1811 6397 1.780309 ACACCAATGTTCAAGGGAGGA 59.220 47.619 0.00 0.00 34.46 3.71
1836 6422 0.179040 GAACGTGGAACCAGGAACCA 60.179 55.000 18.36 0.00 35.94 3.67
1844 6439 1.818674 GAACCAGGAACCAATGCGATT 59.181 47.619 0.00 0.00 0.00 3.34
1850 6445 2.684881 AGGAACCAATGCGATTGATCAC 59.315 45.455 0.00 0.00 42.83 3.06
1851 6446 2.423185 GGAACCAATGCGATTGATCACA 59.577 45.455 0.00 0.00 42.83 3.58
1854 6449 5.221028 GGAACCAATGCGATTGATCACATAA 60.221 40.000 0.00 0.00 42.83 1.90
1855 6450 6.395426 AACCAATGCGATTGATCACATAAT 57.605 33.333 0.00 0.00 42.83 1.28
1857 6452 5.766670 ACCAATGCGATTGATCACATAATCT 59.233 36.000 0.00 0.00 42.83 2.40
1858 6453 6.936335 ACCAATGCGATTGATCACATAATCTA 59.064 34.615 0.00 0.00 42.83 1.98
1860 6455 8.456471 CCAATGCGATTGATCACATAATCTAAT 58.544 33.333 0.00 0.00 42.83 1.73
1884 6479 8.873215 ATAATAATCAAGTTGTCTCGTACTGG 57.127 34.615 2.11 0.00 0.00 4.00
1945 6659 3.867493 ACGTAATCATCACATGCTCACAG 59.133 43.478 0.00 0.00 0.00 3.66
1959 6673 2.346847 GCTCACAGCAGTAATCTGAACG 59.653 50.000 0.00 0.00 43.76 3.95
1960 6674 2.337583 TCACAGCAGTAATCTGAACGC 58.662 47.619 0.00 0.00 43.76 4.84
1964 6678 3.753272 ACAGCAGTAATCTGAACGCAAAT 59.247 39.130 0.00 0.00 43.76 2.32
1965 6679 4.093514 CAGCAGTAATCTGAACGCAAATG 58.906 43.478 0.00 0.00 43.76 2.32
1966 6680 4.002982 AGCAGTAATCTGAACGCAAATGA 58.997 39.130 0.00 0.00 43.76 2.57
1968 6682 5.048782 AGCAGTAATCTGAACGCAAATGAAA 60.049 36.000 0.00 0.00 43.76 2.69
1974 6688 5.694674 TCTGAACGCAAATGAAAAACAAC 57.305 34.783 0.00 0.00 0.00 3.32
1977 6691 5.612865 TGAACGCAAATGAAAAACAACAAC 58.387 33.333 0.00 0.00 0.00 3.32
1994 6708 8.633075 AACAACAACAACAGTAATGATCAAAG 57.367 30.769 0.00 0.00 0.00 2.77
2061 6800 1.748493 GCAAGTGTTGTTGTGAAGGGA 59.252 47.619 0.00 0.00 0.00 4.20
2286 7066 4.848357 ACTAGCTCAACCTACTAACCGTA 58.152 43.478 0.00 0.00 0.00 4.02
2287 7067 5.444176 ACTAGCTCAACCTACTAACCGTAT 58.556 41.667 0.00 0.00 0.00 3.06
2291 7071 6.567959 AGCTCAACCTACTAACCGTATTTAC 58.432 40.000 0.00 0.00 0.00 2.01
2534 7314 3.792053 CTACTCCGCCGCCATCACC 62.792 68.421 0.00 0.00 0.00 4.02
2564 7344 0.248621 GGATGGGCGCGAGAAAATTG 60.249 55.000 12.10 0.00 0.00 2.32
2627 7407 2.660552 CTGTTGAACGCGACGGGT 60.661 61.111 15.93 12.27 32.10 5.28
2694 7474 1.004560 TTCAAGTCTGGCCTCGCTG 60.005 57.895 3.32 0.00 0.00 5.18
2876 7656 3.564342 GAACGCGACAGTGTGCAGC 62.564 63.158 15.93 2.46 41.52 5.25
3008 7788 0.182299 GCTTCAAGGAGCTAGCCCAT 59.818 55.000 20.25 9.04 39.57 4.00
3065 7846 5.039984 ACGAGACATGATTGATTCTCTTCG 58.960 41.667 0.00 0.00 33.64 3.79
3076 7857 4.703897 TGATTCTCTTCGGTTTGAGTGTT 58.296 39.130 0.00 0.00 0.00 3.32
3131 7921 6.324512 TCCATATATTGCCAACAAAGAGCATT 59.675 34.615 0.00 0.00 39.77 3.56
3137 7927 4.144297 TGCCAACAAAGAGCATTTCTAGT 58.856 39.130 0.00 0.00 34.14 2.57
3139 7929 4.670221 GCCAACAAAGAGCATTTCTAGTCG 60.670 45.833 0.00 0.00 34.14 4.18
3189 7980 5.453480 GGCTGAGTAAATCTTAGTGGGGTAG 60.453 48.000 0.00 0.00 33.11 3.18
3253 8091 2.180276 AGTTAGCGGAGTGGACAAGAT 58.820 47.619 0.00 0.00 0.00 2.40
3261 8099 3.369892 CGGAGTGGACAAGATGAAGGATT 60.370 47.826 0.00 0.00 0.00 3.01
3331 8174 2.536365 TCTTGTCGTATGATGCGGAAC 58.464 47.619 2.58 0.00 0.00 3.62
3360 8203 4.910585 CTCCATGGCGCCGTACCC 62.911 72.222 23.37 0.00 0.00 3.69
3388 8231 2.276740 CACCAGGGGCCTCCATTC 59.723 66.667 0.00 0.00 38.24 2.67
3403 8246 0.617413 CATTCAGCCACAGGAGGAGT 59.383 55.000 0.00 0.00 0.00 3.85
3419 8286 4.621087 GTGGCTTGGGCTTGGGGT 62.621 66.667 0.00 0.00 38.73 4.95
3430 8297 1.065636 GGCTTGGGGTGGTAGTAGAAC 60.066 57.143 0.00 0.00 0.00 3.01
3433 8300 2.708037 TGGGGTGGTAGTAGAACAGT 57.292 50.000 0.00 0.00 0.00 3.55
3437 8304 2.236395 GGGTGGTAGTAGAACAGTGCAT 59.764 50.000 0.00 0.00 0.00 3.96
3441 8308 2.280628 GTAGTAGAACAGTGCATGCCC 58.719 52.381 16.68 2.78 0.00 5.36
3442 8309 0.692476 AGTAGAACAGTGCATGCCCA 59.308 50.000 16.68 0.00 0.00 5.36
3472 8339 2.149803 CTACCGTCACGAACCTGGCA 62.150 60.000 0.00 0.00 0.00 4.92
3481 8348 1.410737 CGAACCTGGCATACGACACG 61.411 60.000 0.00 0.00 0.00 4.49
3494 8361 2.407798 GACACGAAGTCGACGTCAC 58.592 57.895 27.07 12.61 41.61 3.67
3498 8365 2.127496 GAAGTCGACGTCACGCGA 60.127 61.111 23.93 11.77 44.77 5.87
3500 8367 1.454370 GAAGTCGACGTCACGCGATC 61.454 60.000 23.93 9.90 44.77 3.69
3577 8444 2.034221 GGCTTGGGTCTTCGGCTT 59.966 61.111 0.00 0.00 0.00 4.35
3578 8445 2.041115 GGCTTGGGTCTTCGGCTTC 61.041 63.158 0.00 0.00 0.00 3.86
3579 8446 1.302511 GCTTGGGTCTTCGGCTTCA 60.303 57.895 0.00 0.00 0.00 3.02
3582 8449 2.434359 GGGTCTTCGGCTTCACGG 60.434 66.667 0.00 0.00 0.00 4.94
3584 8451 2.048127 GTCTTCGGCTTCACGGCT 60.048 61.111 0.00 0.00 35.72 5.52
3612 8502 3.357079 CCAGCACAGTTGGTCGCC 61.357 66.667 0.00 0.00 0.00 5.54
3615 8505 3.357079 GCACAGTTGGTCGCCCTG 61.357 66.667 0.00 0.00 0.00 4.45
3689 8579 0.250124 CTACCGGCCACACACTGAAA 60.250 55.000 0.00 0.00 0.00 2.69
3691 8581 2.639286 CGGCCACACACTGAAAGC 59.361 61.111 2.24 0.00 37.60 3.51
3694 8584 2.639286 CCACACACTGAAAGCGGC 59.361 61.111 0.00 0.00 37.60 6.53
3716 8606 2.014554 GTCGCGCTCGTTGACAAGA 61.015 57.895 5.56 0.00 36.96 3.02
3717 8607 1.729484 TCGCGCTCGTTGACAAGAG 60.729 57.895 5.56 9.16 37.54 2.85
3718 8608 2.720758 CGCGCTCGTTGACAAGAGG 61.721 63.158 5.56 7.32 35.19 3.69
3719 8609 2.383527 GCGCTCGTTGACAAGAGGG 61.384 63.158 18.72 18.72 46.20 4.30
3720 8610 1.289066 CGCTCGTTGACAAGAGGGA 59.711 57.895 18.44 3.23 46.32 4.20
3721 8611 0.108615 CGCTCGTTGACAAGAGGGAT 60.109 55.000 18.44 0.00 46.32 3.85
3722 8612 1.673033 CGCTCGTTGACAAGAGGGATT 60.673 52.381 18.44 0.00 46.32 3.01
3723 8613 2.003301 GCTCGTTGACAAGAGGGATTC 58.997 52.381 13.22 0.00 35.19 2.52
3724 8614 2.612972 GCTCGTTGACAAGAGGGATTCA 60.613 50.000 13.22 0.00 35.19 2.57
3725 8615 2.996621 CTCGTTGACAAGAGGGATTCAC 59.003 50.000 0.00 0.00 0.00 3.18
3726 8616 1.726791 CGTTGACAAGAGGGATTCACG 59.273 52.381 0.00 0.00 0.00 4.35
3727 8617 2.767505 GTTGACAAGAGGGATTCACGT 58.232 47.619 0.00 0.00 0.00 4.49
3728 8618 2.455674 TGACAAGAGGGATTCACGTG 57.544 50.000 9.94 9.94 0.00 4.49
3729 8619 1.967779 TGACAAGAGGGATTCACGTGA 59.032 47.619 15.76 15.76 0.00 4.35
3730 8620 2.029020 TGACAAGAGGGATTCACGTGAG 60.029 50.000 19.11 6.23 0.00 3.51
3743 8633 4.424566 GTGAGTCGCGGCCGGTTA 62.425 66.667 29.38 0.00 34.56 2.85
3744 8634 4.424566 TGAGTCGCGGCCGGTTAC 62.425 66.667 29.38 9.10 34.56 2.50
3745 8635 4.424566 GAGTCGCGGCCGGTTACA 62.425 66.667 29.38 0.00 34.56 2.41
3746 8636 3.919973 GAGTCGCGGCCGGTTACAA 62.920 63.158 29.38 0.00 34.56 2.41
3747 8637 3.484547 GTCGCGGCCGGTTACAAG 61.485 66.667 29.38 0.00 34.56 3.16
3748 8638 3.993584 TCGCGGCCGGTTACAAGT 61.994 61.111 29.38 0.00 34.56 3.16
3749 8639 3.784412 CGCGGCCGGTTACAAGTG 61.784 66.667 29.38 0.00 0.00 3.16
3750 8640 3.428282 GCGGCCGGTTACAAGTGG 61.428 66.667 29.38 0.00 0.00 4.00
3751 8641 2.744709 CGGCCGGTTACAAGTGGG 60.745 66.667 20.10 0.00 0.00 4.61
3752 8642 2.433004 GGCCGGTTACAAGTGGGT 59.567 61.111 1.90 0.00 0.00 4.51
3753 8643 1.969589 GGCCGGTTACAAGTGGGTG 60.970 63.158 1.90 0.00 0.00 4.61
3754 8644 1.228033 GCCGGTTACAAGTGGGTGT 60.228 57.895 1.90 0.00 35.43 4.16
3755 8645 0.820482 GCCGGTTACAAGTGGGTGTT 60.820 55.000 1.90 0.00 32.75 3.32
3756 8646 1.232119 CCGGTTACAAGTGGGTGTTC 58.768 55.000 0.00 0.00 32.75 3.18
3757 8647 1.475392 CCGGTTACAAGTGGGTGTTCA 60.475 52.381 0.00 0.00 32.75 3.18
3758 8648 1.600485 CGGTTACAAGTGGGTGTTCAC 59.400 52.381 0.00 0.00 37.89 3.18
3759 8649 1.600485 GGTTACAAGTGGGTGTTCACG 59.400 52.381 0.00 0.00 42.10 4.35
3760 8650 2.282407 GTTACAAGTGGGTGTTCACGT 58.718 47.619 0.00 0.00 42.10 4.49
3762 8652 0.250793 ACAAGTGGGTGTTCACGTGA 59.749 50.000 15.76 15.76 45.43 4.35
3763 8653 1.339247 ACAAGTGGGTGTTCACGTGAA 60.339 47.619 26.53 26.53 45.43 3.18
3764 8654 1.330521 CAAGTGGGTGTTCACGTGAAG 59.669 52.381 30.38 12.14 45.43 3.02
3765 8655 0.828022 AGTGGGTGTTCACGTGAAGA 59.172 50.000 30.38 26.55 42.10 2.87
3766 8656 1.208535 AGTGGGTGTTCACGTGAAGAA 59.791 47.619 30.38 19.00 42.10 2.52
3767 8657 2.011222 GTGGGTGTTCACGTGAAGAAA 58.989 47.619 30.38 16.50 34.27 2.52
3768 8658 2.420722 GTGGGTGTTCACGTGAAGAAAA 59.579 45.455 30.38 15.18 34.27 2.29
3769 8659 2.420722 TGGGTGTTCACGTGAAGAAAAC 59.579 45.455 30.38 23.04 34.27 2.43
3770 8660 2.681344 GGGTGTTCACGTGAAGAAAACT 59.319 45.455 30.38 0.00 34.39 2.66
3771 8661 3.128068 GGGTGTTCACGTGAAGAAAACTT 59.872 43.478 30.38 0.00 34.39 2.66
3772 8662 4.333372 GGGTGTTCACGTGAAGAAAACTTA 59.667 41.667 30.38 3.76 34.39 2.24
3773 8663 5.008316 GGGTGTTCACGTGAAGAAAACTTAT 59.992 40.000 30.38 0.00 34.39 1.73
3774 8664 6.203338 GGGTGTTCACGTGAAGAAAACTTATA 59.797 38.462 30.38 2.37 34.39 0.98
3775 8665 7.067728 GGTGTTCACGTGAAGAAAACTTATAC 58.932 38.462 30.38 15.39 34.39 1.47
3776 8666 7.042254 GGTGTTCACGTGAAGAAAACTTATACT 60.042 37.037 30.38 0.00 34.39 2.12
3777 8667 8.002665 GTGTTCACGTGAAGAAAACTTATACTC 58.997 37.037 30.38 13.92 34.27 2.59
3778 8668 6.922980 TCACGTGAAGAAAACTTATACTCG 57.077 37.500 17.62 0.00 0.00 4.18
3779 8669 5.860182 TCACGTGAAGAAAACTTATACTCGG 59.140 40.000 17.62 0.00 0.00 4.63
3780 8670 5.061808 CACGTGAAGAAAACTTATACTCGGG 59.938 44.000 10.90 0.00 0.00 5.14
3781 8671 4.032558 CGTGAAGAAAACTTATACTCGGGC 59.967 45.833 0.00 0.00 0.00 6.13
3782 8672 4.032558 GTGAAGAAAACTTATACTCGGGCG 59.967 45.833 0.00 0.00 0.00 6.13
3783 8673 4.082081 TGAAGAAAACTTATACTCGGGCGA 60.082 41.667 0.00 0.00 0.00 5.54
3784 8674 4.043037 AGAAAACTTATACTCGGGCGAG 57.957 45.455 0.00 0.00 46.91 5.03
3797 8687 3.142838 GCGAGTAGCGGTGGGGTA 61.143 66.667 0.00 0.00 41.29 3.69
3798 8688 2.713967 GCGAGTAGCGGTGGGGTAA 61.714 63.158 0.00 0.00 41.29 2.85
3799 8689 1.892338 CGAGTAGCGGTGGGGTAAA 59.108 57.895 0.00 0.00 36.03 2.01
3800 8690 0.247185 CGAGTAGCGGTGGGGTAAAA 59.753 55.000 0.00 0.00 36.03 1.52
3801 8691 1.338011 CGAGTAGCGGTGGGGTAAAAA 60.338 52.381 0.00 0.00 36.03 1.94
3802 8692 2.678769 CGAGTAGCGGTGGGGTAAAAAT 60.679 50.000 0.00 0.00 36.03 1.82
3803 8693 3.430651 CGAGTAGCGGTGGGGTAAAAATA 60.431 47.826 0.00 0.00 36.03 1.40
3804 8694 4.124970 GAGTAGCGGTGGGGTAAAAATAG 58.875 47.826 0.00 0.00 0.00 1.73
3805 8695 2.430248 AGCGGTGGGGTAAAAATAGG 57.570 50.000 0.00 0.00 0.00 2.57
3806 8696 1.637035 AGCGGTGGGGTAAAAATAGGT 59.363 47.619 0.00 0.00 0.00 3.08
3807 8697 1.746787 GCGGTGGGGTAAAAATAGGTG 59.253 52.381 0.00 0.00 0.00 4.00
3808 8698 1.746787 CGGTGGGGTAAAAATAGGTGC 59.253 52.381 0.00 0.00 0.00 5.01
3809 8699 2.104967 GGTGGGGTAAAAATAGGTGCC 58.895 52.381 0.00 0.00 0.00 5.01
3810 8700 2.291996 GGTGGGGTAAAAATAGGTGCCT 60.292 50.000 0.00 0.00 0.00 4.75
3811 8701 3.437213 GTGGGGTAAAAATAGGTGCCTT 58.563 45.455 0.00 0.00 0.00 4.35
3812 8702 3.446161 GTGGGGTAAAAATAGGTGCCTTC 59.554 47.826 0.00 0.00 0.00 3.46
3813 8703 3.335484 TGGGGTAAAAATAGGTGCCTTCT 59.665 43.478 0.00 0.00 0.00 2.85
3814 8704 4.540906 TGGGGTAAAAATAGGTGCCTTCTA 59.459 41.667 0.00 0.00 0.00 2.10
3815 8705 5.131067 GGGGTAAAAATAGGTGCCTTCTAG 58.869 45.833 0.00 0.00 0.00 2.43
3816 8706 5.104235 GGGGTAAAAATAGGTGCCTTCTAGA 60.104 44.000 0.00 0.00 0.00 2.43
3817 8707 6.410504 GGGGTAAAAATAGGTGCCTTCTAGAT 60.411 42.308 0.00 0.00 0.00 1.98
3818 8708 6.486993 GGGTAAAAATAGGTGCCTTCTAGATG 59.513 42.308 0.00 0.00 0.00 2.90
3819 8709 6.486993 GGTAAAAATAGGTGCCTTCTAGATGG 59.513 42.308 18.29 18.29 0.00 3.51
3820 8710 5.975988 AAAATAGGTGCCTTCTAGATGGA 57.024 39.130 25.07 9.94 0.00 3.41
3821 8711 5.559148 AAATAGGTGCCTTCTAGATGGAG 57.441 43.478 25.07 5.94 0.00 3.86
3822 8712 2.559381 AGGTGCCTTCTAGATGGAGT 57.441 50.000 25.07 5.92 0.00 3.85
3823 8713 3.689872 AGGTGCCTTCTAGATGGAGTA 57.310 47.619 25.07 9.90 0.00 2.59
3824 8714 3.571590 AGGTGCCTTCTAGATGGAGTAG 58.428 50.000 25.07 4.50 0.00 2.57
3825 8715 3.052490 AGGTGCCTTCTAGATGGAGTAGT 60.052 47.826 25.07 5.30 0.00 2.73
3826 8716 4.168283 AGGTGCCTTCTAGATGGAGTAGTA 59.832 45.833 25.07 4.14 0.00 1.82
3827 8717 4.894114 GGTGCCTTCTAGATGGAGTAGTAA 59.106 45.833 25.07 1.99 0.00 2.24
3828 8718 5.363005 GGTGCCTTCTAGATGGAGTAGTAAA 59.637 44.000 25.07 0.81 0.00 2.01
3829 8719 6.127140 GGTGCCTTCTAGATGGAGTAGTAAAA 60.127 42.308 25.07 0.00 0.00 1.52
3830 8720 6.981559 GTGCCTTCTAGATGGAGTAGTAAAAG 59.018 42.308 25.07 0.99 0.00 2.27
3831 8721 6.668283 TGCCTTCTAGATGGAGTAGTAAAAGT 59.332 38.462 25.07 0.00 0.00 2.66
3832 8722 7.180408 TGCCTTCTAGATGGAGTAGTAAAAGTT 59.820 37.037 25.07 0.00 0.00 2.66
3833 8723 8.041919 GCCTTCTAGATGGAGTAGTAAAAGTTT 58.958 37.037 25.07 0.00 0.00 2.66
3834 8724 9.945904 CCTTCTAGATGGAGTAGTAAAAGTTTT 57.054 33.333 17.85 6.06 0.00 2.43
3846 8736 9.905171 AGTAGTAAAAGTTTTACTCTCTAACCG 57.095 33.333 33.68 0.00 36.67 4.44
3847 8737 9.133627 GTAGTAAAAGTTTTACTCTCTAACCGG 57.866 37.037 33.68 0.00 36.67 5.28
3848 8738 7.730084 AGTAAAAGTTTTACTCTCTAACCGGT 58.270 34.615 27.81 0.00 29.89 5.28
3849 8739 8.206867 AGTAAAAGTTTTACTCTCTAACCGGTT 58.793 33.333 27.81 25.64 29.89 4.44
3850 8740 7.870509 AAAAGTTTTACTCTCTAACCGGTTT 57.129 32.000 27.64 8.85 0.00 3.27
3851 8741 8.962884 AAAAGTTTTACTCTCTAACCGGTTTA 57.037 30.769 27.64 13.44 0.00 2.01
3852 8742 8.599055 AAAGTTTTACTCTCTAACCGGTTTAG 57.401 34.615 27.64 22.18 38.96 1.85
3853 8743 6.695429 AGTTTTACTCTCTAACCGGTTTAGG 58.305 40.000 27.64 15.86 38.24 2.69
3854 8744 6.494835 AGTTTTACTCTCTAACCGGTTTAGGA 59.505 38.462 27.64 19.04 38.24 2.94
3855 8745 6.521151 TTTACTCTCTAACCGGTTTAGGAG 57.479 41.667 27.64 27.01 39.10 3.69
3856 8746 4.313020 ACTCTCTAACCGGTTTAGGAGA 57.687 45.455 31.14 29.90 37.32 3.71
3857 8747 4.869451 ACTCTCTAACCGGTTTAGGAGAT 58.131 43.478 31.14 22.63 37.32 2.75
3858 8748 5.270794 ACTCTCTAACCGGTTTAGGAGATT 58.729 41.667 31.14 25.90 37.32 2.40
3859 8749 5.127356 ACTCTCTAACCGGTTTAGGAGATTG 59.873 44.000 31.14 25.18 37.32 2.67
3860 8750 4.404715 TCTCTAACCGGTTTAGGAGATTGG 59.595 45.833 27.64 10.29 38.24 3.16
3861 8751 2.124277 AACCGGTTTAGGAGATTGGC 57.876 50.000 15.86 0.00 34.73 4.52
3862 8752 1.286248 ACCGGTTTAGGAGATTGGCT 58.714 50.000 0.00 0.00 34.73 4.75
3863 8753 2.474112 ACCGGTTTAGGAGATTGGCTA 58.526 47.619 0.00 0.00 34.73 3.93
3864 8754 2.434702 ACCGGTTTAGGAGATTGGCTAG 59.565 50.000 0.00 0.00 34.73 3.42
3865 8755 2.224305 CCGGTTTAGGAGATTGGCTAGG 60.224 54.545 0.00 0.00 0.00 3.02
3866 8756 2.434702 CGGTTTAGGAGATTGGCTAGGT 59.565 50.000 0.00 0.00 0.00 3.08
3867 8757 3.741388 CGGTTTAGGAGATTGGCTAGGTG 60.741 52.174 0.00 0.00 0.00 4.00
3868 8758 3.206964 GTTTAGGAGATTGGCTAGGTGC 58.793 50.000 0.00 0.00 41.94 5.01
3869 8759 2.478872 TAGGAGATTGGCTAGGTGCT 57.521 50.000 0.00 0.00 42.39 4.40
3870 8760 0.835941 AGGAGATTGGCTAGGTGCTG 59.164 55.000 0.00 0.00 42.39 4.41
3871 8761 0.179034 GGAGATTGGCTAGGTGCTGG 60.179 60.000 0.00 0.00 42.39 4.85
3872 8762 0.543749 GAGATTGGCTAGGTGCTGGT 59.456 55.000 0.00 0.00 42.39 4.00
3873 8763 0.995024 AGATTGGCTAGGTGCTGGTT 59.005 50.000 0.00 0.00 42.39 3.67
3874 8764 2.170607 GAGATTGGCTAGGTGCTGGTTA 59.829 50.000 0.00 0.00 42.39 2.85
3875 8765 2.171448 AGATTGGCTAGGTGCTGGTTAG 59.829 50.000 0.00 0.00 42.39 2.34
3876 8766 1.651737 TTGGCTAGGTGCTGGTTAGA 58.348 50.000 0.00 0.00 42.39 2.10
3877 8767 1.195115 TGGCTAGGTGCTGGTTAGAG 58.805 55.000 0.00 0.00 42.39 2.43
3878 8768 0.466124 GGCTAGGTGCTGGTTAGAGG 59.534 60.000 0.00 0.00 42.39 3.69
3879 8769 1.486211 GCTAGGTGCTGGTTAGAGGA 58.514 55.000 0.00 0.00 38.95 3.71
3880 8770 1.410882 GCTAGGTGCTGGTTAGAGGAG 59.589 57.143 0.00 0.00 38.95 3.69
3881 8771 2.950874 GCTAGGTGCTGGTTAGAGGAGA 60.951 54.545 0.00 0.00 38.95 3.71
3882 8772 1.562783 AGGTGCTGGTTAGAGGAGAC 58.437 55.000 0.00 0.00 0.00 3.36
3884 8774 1.205893 GGTGCTGGTTAGAGGAGACTG 59.794 57.143 0.00 0.00 44.43 3.51
3885 8775 1.205893 GTGCTGGTTAGAGGAGACTGG 59.794 57.143 0.00 0.00 44.43 4.00
3886 8776 0.176910 GCTGGTTAGAGGAGACTGGC 59.823 60.000 0.00 0.00 44.43 4.85
3887 8777 1.561643 CTGGTTAGAGGAGACTGGCA 58.438 55.000 0.00 0.00 44.43 4.92
3888 8778 1.205893 CTGGTTAGAGGAGACTGGCAC 59.794 57.143 0.00 0.00 44.43 5.01
3889 8779 1.267121 GGTTAGAGGAGACTGGCACA 58.733 55.000 0.00 0.00 44.43 4.57
3890 8780 1.623811 GGTTAGAGGAGACTGGCACAA 59.376 52.381 0.00 0.00 44.43 3.33
3891 8781 2.354203 GGTTAGAGGAGACTGGCACAAG 60.354 54.545 0.00 0.00 44.43 3.16
3892 8782 2.563179 GTTAGAGGAGACTGGCACAAGA 59.437 50.000 0.00 0.00 44.43 3.02
3893 8783 1.265236 AGAGGAGACTGGCACAAGAG 58.735 55.000 0.00 0.00 44.43 2.85
3894 8784 0.972883 GAGGAGACTGGCACAAGAGT 59.027 55.000 0.00 0.00 44.43 3.24
3895 8785 2.171840 GAGGAGACTGGCACAAGAGTA 58.828 52.381 0.00 0.00 44.43 2.59
3896 8786 2.763448 GAGGAGACTGGCACAAGAGTAT 59.237 50.000 0.00 0.00 44.43 2.12
3897 8787 3.954904 GAGGAGACTGGCACAAGAGTATA 59.045 47.826 0.00 0.00 44.43 1.47
3898 8788 4.551671 AGGAGACTGGCACAAGAGTATAT 58.448 43.478 0.00 0.00 41.13 0.86
3899 8789 4.586841 AGGAGACTGGCACAAGAGTATATC 59.413 45.833 0.00 0.00 41.13 1.63
3900 8790 4.262249 GGAGACTGGCACAAGAGTATATCC 60.262 50.000 0.00 0.00 38.70 2.59
3901 8791 4.290093 AGACTGGCACAAGAGTATATCCA 58.710 43.478 0.00 0.00 38.70 3.41
3902 8792 4.100189 AGACTGGCACAAGAGTATATCCAC 59.900 45.833 0.00 0.00 38.70 4.02
3903 8793 3.134804 ACTGGCACAAGAGTATATCCACC 59.865 47.826 0.00 0.00 38.70 4.61
3904 8794 2.102420 TGGCACAAGAGTATATCCACCG 59.898 50.000 0.00 0.00 31.92 4.94
3905 8795 2.548067 GGCACAAGAGTATATCCACCGG 60.548 54.545 0.00 0.00 0.00 5.28
3906 8796 2.364324 GCACAAGAGTATATCCACCGGA 59.636 50.000 9.46 0.00 35.55 5.14
3907 8797 3.799232 GCACAAGAGTATATCCACCGGAC 60.799 52.174 9.46 0.00 32.98 4.79
3908 8798 3.637229 CACAAGAGTATATCCACCGGACT 59.363 47.826 9.46 0.00 32.98 3.85
3909 8799 3.890147 ACAAGAGTATATCCACCGGACTC 59.110 47.826 9.46 8.99 32.98 3.36
3910 8800 3.157750 AGAGTATATCCACCGGACTCC 57.842 52.381 9.46 0.00 32.98 3.85
3911 8801 2.169330 GAGTATATCCACCGGACTCCC 58.831 57.143 9.46 0.00 32.98 4.30
3912 8802 1.203149 AGTATATCCACCGGACTCCCC 60.203 57.143 9.46 0.00 32.98 4.81
3913 8803 0.115745 TATATCCACCGGACTCCCCC 59.884 60.000 9.46 0.00 32.98 5.40
3967 8857 3.217743 GACTCGGGGGCGACTAGG 61.218 72.222 0.00 0.00 0.00 3.02
3968 8858 4.835891 ACTCGGGGGCGACTAGGG 62.836 72.222 0.00 0.00 0.00 3.53
3969 8859 4.835891 CTCGGGGGCGACTAGGGT 62.836 72.222 0.00 0.00 0.00 4.34
3970 8860 4.387343 TCGGGGGCGACTAGGGTT 62.387 66.667 0.00 0.00 0.00 4.11
3971 8861 3.846430 CGGGGGCGACTAGGGTTC 61.846 72.222 0.00 0.00 0.00 3.62
3972 8862 2.365237 GGGGGCGACTAGGGTTCT 60.365 66.667 0.00 0.00 0.00 3.01
3973 8863 2.732619 GGGGGCGACTAGGGTTCTG 61.733 68.421 0.00 0.00 0.00 3.02
3974 8864 2.187163 GGGCGACTAGGGTTCTGC 59.813 66.667 0.00 0.00 0.00 4.26
3975 8865 2.202756 GGCGACTAGGGTTCTGCG 60.203 66.667 0.00 0.00 0.00 5.18
3976 8866 2.202756 GCGACTAGGGTTCTGCGG 60.203 66.667 0.00 0.00 0.00 5.69
3977 8867 2.202756 CGACTAGGGTTCTGCGGC 60.203 66.667 0.00 0.00 0.00 6.53
3978 8868 2.187163 GACTAGGGTTCTGCGGCC 59.813 66.667 0.00 0.00 0.00 6.13
3979 8869 3.718210 GACTAGGGTTCTGCGGCCG 62.718 68.421 24.05 24.05 0.00 6.13
4004 8894 4.186911 CCCCCTCCATTCCCTTCA 57.813 61.111 0.00 0.00 0.00 3.02
4005 8895 2.650764 CCCCCTCCATTCCCTTCAT 58.349 57.895 0.00 0.00 0.00 2.57
4006 8896 0.480252 CCCCCTCCATTCCCTTCATC 59.520 60.000 0.00 0.00 0.00 2.92
4007 8897 0.480252 CCCCTCCATTCCCTTCATCC 59.520 60.000 0.00 0.00 0.00 3.51
4008 8898 0.480252 CCCTCCATTCCCTTCATCCC 59.520 60.000 0.00 0.00 0.00 3.85
4009 8899 0.480252 CCTCCATTCCCTTCATCCCC 59.520 60.000 0.00 0.00 0.00 4.81
4010 8900 1.527457 CTCCATTCCCTTCATCCCCT 58.473 55.000 0.00 0.00 0.00 4.79
4011 8901 1.423161 CTCCATTCCCTTCATCCCCTC 59.577 57.143 0.00 0.00 0.00 4.30
4012 8902 0.109342 CCATTCCCTTCATCCCCTCG 59.891 60.000 0.00 0.00 0.00 4.63
4013 8903 0.536006 CATTCCCTTCATCCCCTCGC 60.536 60.000 0.00 0.00 0.00 5.03
4014 8904 1.709994 ATTCCCTTCATCCCCTCGCC 61.710 60.000 0.00 0.00 0.00 5.54
4015 8905 4.241555 CCCTTCATCCCCTCGCCG 62.242 72.222 0.00 0.00 0.00 6.46
4016 8906 4.918201 CCTTCATCCCCTCGCCGC 62.918 72.222 0.00 0.00 0.00 6.53
4017 8907 3.854669 CTTCATCCCCTCGCCGCT 61.855 66.667 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.776795 TCTCGTGTACTGCAATTCACTA 57.223 40.909 3.46 0.00 0.00 2.74
3 4 4.391830 GGATTTCTCGTGTACTGCAATTCA 59.608 41.667 0.00 0.00 0.00 2.57
4 5 4.391830 TGGATTTCTCGTGTACTGCAATTC 59.608 41.667 0.00 0.00 0.00 2.17
64 65 7.234661 AGTTTCTTTCTTGTGGGTTAAACAA 57.765 32.000 0.00 0.00 36.19 2.83
65 66 6.844097 AGTTTCTTTCTTGTGGGTTAAACA 57.156 33.333 0.00 0.00 0.00 2.83
66 67 8.542497 AAAAGTTTCTTTCTTGTGGGTTAAAC 57.458 30.769 0.00 0.00 0.00 2.01
68 69 8.129496 AGAAAAGTTTCTTTCTTGTGGGTTAA 57.871 30.769 0.31 0.00 44.70 2.01
69 70 7.712204 AGAAAAGTTTCTTTCTTGTGGGTTA 57.288 32.000 0.31 0.00 44.70 2.85
96 97 4.315803 CATATGGAAGTGACCGGTATTCC 58.684 47.826 27.30 27.30 41.34 3.01
97 98 3.746492 GCATATGGAAGTGACCGGTATTC 59.254 47.826 7.34 12.60 0.00 1.75
100 101 1.067974 CGCATATGGAAGTGACCGGTA 59.932 52.381 7.34 0.00 0.00 4.02
101 102 0.179084 CGCATATGGAAGTGACCGGT 60.179 55.000 6.92 6.92 0.00 5.28
102 103 0.179084 ACGCATATGGAAGTGACCGG 60.179 55.000 0.00 0.00 0.00 5.28
103 104 1.209128 GACGCATATGGAAGTGACCG 58.791 55.000 4.56 0.00 0.00 4.79
104 105 1.209128 CGACGCATATGGAAGTGACC 58.791 55.000 4.56 0.00 0.00 4.02
105 106 1.852895 GACGACGCATATGGAAGTGAC 59.147 52.381 4.56 0.00 0.00 3.67
106 107 1.533129 CGACGACGCATATGGAAGTGA 60.533 52.381 4.56 0.00 0.00 3.41
107 108 0.846401 CGACGACGCATATGGAAGTG 59.154 55.000 4.56 0.00 0.00 3.16
108 109 3.251817 CGACGACGCATATGGAAGT 57.748 52.632 4.56 1.39 0.00 3.01
119 120 2.453650 TTTATCTCAGAGCGACGACG 57.546 50.000 2.12 2.12 42.93 5.12
120 121 6.858993 AGAAATATTTATCTCAGAGCGACGAC 59.141 38.462 0.00 0.00 0.00 4.34
121 122 6.971602 AGAAATATTTATCTCAGAGCGACGA 58.028 36.000 0.00 0.00 0.00 4.20
122 123 7.630470 AAGAAATATTTATCTCAGAGCGACG 57.370 36.000 0.00 0.00 0.00 5.12
124 125 9.035607 GTCAAAGAAATATTTATCTCAGAGCGA 57.964 33.333 0.00 0.00 0.00 4.93
125 126 8.820933 TGTCAAAGAAATATTTATCTCAGAGCG 58.179 33.333 0.00 0.00 0.00 5.03
135 136 9.619316 CATGGTCGTTTGTCAAAGAAATATTTA 57.381 29.630 0.00 0.00 0.00 1.40
136 137 8.356657 TCATGGTCGTTTGTCAAAGAAATATTT 58.643 29.630 0.00 0.00 0.00 1.40
137 138 7.881142 TCATGGTCGTTTGTCAAAGAAATATT 58.119 30.769 0.00 0.00 0.00 1.28
138 139 7.447374 TCATGGTCGTTTGTCAAAGAAATAT 57.553 32.000 0.00 0.00 0.00 1.28
140 141 5.766150 TCATGGTCGTTTGTCAAAGAAAT 57.234 34.783 0.00 0.00 0.00 2.17
143 144 4.447290 TCTTCATGGTCGTTTGTCAAAGA 58.553 39.130 0.00 0.00 0.00 2.52
144 145 4.811555 TCTTCATGGTCGTTTGTCAAAG 57.188 40.909 0.00 0.00 0.00 2.77
145 146 5.568685 TTTCTTCATGGTCGTTTGTCAAA 57.431 34.783 0.00 0.00 0.00 2.69
146 147 5.568685 TTTTCTTCATGGTCGTTTGTCAA 57.431 34.783 0.00 0.00 0.00 3.18
147 148 5.568685 TTTTTCTTCATGGTCGTTTGTCA 57.431 34.783 0.00 0.00 0.00 3.58
148 149 5.339611 CGATTTTTCTTCATGGTCGTTTGTC 59.660 40.000 0.00 0.00 0.00 3.18
149 150 5.008217 TCGATTTTTCTTCATGGTCGTTTGT 59.992 36.000 0.00 0.00 0.00 2.83
151 152 5.238650 ACTCGATTTTTCTTCATGGTCGTTT 59.761 36.000 0.00 0.00 0.00 3.60
154 155 4.627467 AGACTCGATTTTTCTTCATGGTCG 59.373 41.667 0.00 0.00 0.00 4.79
155 156 5.163814 CCAGACTCGATTTTTCTTCATGGTC 60.164 44.000 0.00 0.00 0.00 4.02
156 157 4.697352 CCAGACTCGATTTTTCTTCATGGT 59.303 41.667 0.00 0.00 0.00 3.55
157 158 4.095483 CCCAGACTCGATTTTTCTTCATGG 59.905 45.833 0.00 0.00 0.00 3.66
158 159 4.437930 GCCCAGACTCGATTTTTCTTCATG 60.438 45.833 0.00 0.00 0.00 3.07
159 160 3.691609 GCCCAGACTCGATTTTTCTTCAT 59.308 43.478 0.00 0.00 0.00 2.57
160 161 3.074412 GCCCAGACTCGATTTTTCTTCA 58.926 45.455 0.00 0.00 0.00 3.02
161 162 3.074412 TGCCCAGACTCGATTTTTCTTC 58.926 45.455 0.00 0.00 0.00 2.87
162 163 3.140325 TGCCCAGACTCGATTTTTCTT 57.860 42.857 0.00 0.00 0.00 2.52
163 164 2.859165 TGCCCAGACTCGATTTTTCT 57.141 45.000 0.00 0.00 0.00 2.52
164 165 3.002759 GCTATGCCCAGACTCGATTTTTC 59.997 47.826 0.00 0.00 0.00 2.29
165 166 2.945668 GCTATGCCCAGACTCGATTTTT 59.054 45.455 0.00 0.00 0.00 1.94
167 168 1.486310 TGCTATGCCCAGACTCGATTT 59.514 47.619 0.00 0.00 0.00 2.17
169 170 1.346062 ATGCTATGCCCAGACTCGAT 58.654 50.000 0.00 0.00 0.00 3.59
170 171 1.123077 AATGCTATGCCCAGACTCGA 58.877 50.000 0.00 0.00 0.00 4.04
171 172 1.959042 AAATGCTATGCCCAGACTCG 58.041 50.000 0.00 0.00 0.00 4.18
173 174 4.510167 AACTAAATGCTATGCCCAGACT 57.490 40.909 0.00 0.00 0.00 3.24
174 175 4.640201 TGAAACTAAATGCTATGCCCAGAC 59.360 41.667 0.00 0.00 0.00 3.51
176 177 4.641989 ACTGAAACTAAATGCTATGCCCAG 59.358 41.667 0.00 0.00 0.00 4.45
178 179 6.486657 TGATACTGAAACTAAATGCTATGCCC 59.513 38.462 0.00 0.00 0.00 5.36
179 180 7.496529 TGATACTGAAACTAAATGCTATGCC 57.503 36.000 0.00 0.00 0.00 4.40
180 181 7.074502 GCTGATACTGAAACTAAATGCTATGC 58.925 38.462 0.00 0.00 0.00 3.14
181 182 7.570140 CGGCTGATACTGAAACTAAATGCTATG 60.570 40.741 0.00 0.00 0.00 2.23
182 183 6.425114 CGGCTGATACTGAAACTAAATGCTAT 59.575 38.462 0.00 0.00 0.00 2.97
183 184 5.753438 CGGCTGATACTGAAACTAAATGCTA 59.247 40.000 0.00 0.00 0.00 3.49
184 185 4.572389 CGGCTGATACTGAAACTAAATGCT 59.428 41.667 0.00 0.00 0.00 3.79
185 186 4.332819 ACGGCTGATACTGAAACTAAATGC 59.667 41.667 0.00 0.00 0.00 3.56
186 187 6.250819 CAACGGCTGATACTGAAACTAAATG 58.749 40.000 0.00 0.00 0.00 2.32
187 188 5.163754 GCAACGGCTGATACTGAAACTAAAT 60.164 40.000 0.00 0.00 36.96 1.40
188 189 4.153475 GCAACGGCTGATACTGAAACTAAA 59.847 41.667 0.00 0.00 36.96 1.85
189 190 3.682858 GCAACGGCTGATACTGAAACTAA 59.317 43.478 0.00 0.00 36.96 2.24
192 193 1.804151 TGCAACGGCTGATACTGAAAC 59.196 47.619 0.00 0.00 41.91 2.78
193 194 2.177394 TGCAACGGCTGATACTGAAA 57.823 45.000 0.00 0.00 41.91 2.69
195 196 1.066215 ACATGCAACGGCTGATACTGA 60.066 47.619 0.00 0.00 41.91 3.41
196 197 1.372582 ACATGCAACGGCTGATACTG 58.627 50.000 0.00 0.00 41.91 2.74
197 198 2.113860 AACATGCAACGGCTGATACT 57.886 45.000 0.00 0.00 41.91 2.12
198 199 2.095263 ACAAACATGCAACGGCTGATAC 60.095 45.455 0.00 0.00 41.91 2.24
199 200 2.158559 ACAAACATGCAACGGCTGATA 58.841 42.857 0.00 0.00 41.91 2.15
200 201 0.961019 ACAAACATGCAACGGCTGAT 59.039 45.000 0.00 0.00 41.91 2.90
203 204 1.890876 TCTACAAACATGCAACGGCT 58.109 45.000 0.00 0.00 41.91 5.52
205 206 3.896648 AGTTCTACAAACATGCAACGG 57.103 42.857 0.00 0.00 0.00 4.44
206 207 6.129457 GCTTTTAGTTCTACAAACATGCAACG 60.129 38.462 0.00 0.00 0.00 4.10
207 208 6.695278 TGCTTTTAGTTCTACAAACATGCAAC 59.305 34.615 0.00 0.00 0.00 4.17
208 209 6.800543 TGCTTTTAGTTCTACAAACATGCAA 58.199 32.000 0.00 0.00 0.00 4.08
209 210 6.384258 TGCTTTTAGTTCTACAAACATGCA 57.616 33.333 0.00 0.00 0.00 3.96
210 211 7.138736 TCTTGCTTTTAGTTCTACAAACATGC 58.861 34.615 0.00 0.00 0.00 4.06
211 212 9.683069 ATTCTTGCTTTTAGTTCTACAAACATG 57.317 29.630 0.00 0.00 0.00 3.21
244 245 9.965824 ACCATCTGTTCTTTATGTTTTAACTTG 57.034 29.630 0.00 0.00 0.00 3.16
252 253 9.520515 AGACAAATACCATCTGTTCTTTATGTT 57.479 29.630 0.00 0.00 0.00 2.71
253 254 9.520515 AAGACAAATACCATCTGTTCTTTATGT 57.479 29.630 0.00 0.00 0.00 2.29
254 255 9.778993 CAAGACAAATACCATCTGTTCTTTATG 57.221 33.333 0.00 0.00 0.00 1.90
257 258 8.463930 TTCAAGACAAATACCATCTGTTCTTT 57.536 30.769 0.00 0.00 0.00 2.52
259 260 8.352942 GTTTTCAAGACAAATACCATCTGTTCT 58.647 33.333 0.00 0.00 0.00 3.01
260 261 8.134895 TGTTTTCAAGACAAATACCATCTGTTC 58.865 33.333 0.00 0.00 0.00 3.18
261 262 8.006298 TGTTTTCAAGACAAATACCATCTGTT 57.994 30.769 0.00 0.00 0.00 3.16
271 272 9.883142 TGGAGTTATTTTGTTTTCAAGACAAAT 57.117 25.926 7.04 1.66 43.96 2.32
272 273 9.883142 ATGGAGTTATTTTGTTTTCAAGACAAA 57.117 25.926 2.14 2.14 43.16 2.83
282 283 9.772973 GGTCCTTTTTATGGAGTTATTTTGTTT 57.227 29.630 0.00 0.00 33.78 2.83
283 284 8.929487 TGGTCCTTTTTATGGAGTTATTTTGTT 58.071 29.630 0.00 0.00 33.78 2.83
285 286 7.545615 GCTGGTCCTTTTTATGGAGTTATTTTG 59.454 37.037 0.00 0.00 33.78 2.44
286 287 7.576856 CGCTGGTCCTTTTTATGGAGTTATTTT 60.577 37.037 0.00 0.00 33.78 1.82
288 289 5.357032 CGCTGGTCCTTTTTATGGAGTTATT 59.643 40.000 0.00 0.00 33.78 1.40
289 290 4.881850 CGCTGGTCCTTTTTATGGAGTTAT 59.118 41.667 0.00 0.00 33.78 1.89
290 291 4.258543 CGCTGGTCCTTTTTATGGAGTTA 58.741 43.478 0.00 0.00 33.78 2.24
293 294 1.401905 GCGCTGGTCCTTTTTATGGAG 59.598 52.381 0.00 0.00 33.78 3.86
295 296 0.098728 CGCGCTGGTCCTTTTTATGG 59.901 55.000 5.56 0.00 0.00 2.74
296 297 0.523335 GCGCGCTGGTCCTTTTTATG 60.523 55.000 26.67 0.00 0.00 1.90
297 298 0.958382 TGCGCGCTGGTCCTTTTTAT 60.958 50.000 33.29 0.00 0.00 1.40
298 299 0.958382 ATGCGCGCTGGTCCTTTTTA 60.958 50.000 33.29 7.30 0.00 1.52
300 301 2.672996 ATGCGCGCTGGTCCTTTT 60.673 55.556 33.29 2.56 0.00 2.27
308 309 2.870146 GAAAGTGACGATGCGCGCTG 62.870 60.000 33.29 23.23 46.04 5.18
309 310 2.730672 GAAAGTGACGATGCGCGCT 61.731 57.895 33.29 17.95 46.04 5.92
310 311 2.276058 GAAAGTGACGATGCGCGC 60.276 61.111 27.26 27.26 46.04 6.86
312 313 1.421410 ATCGGAAAGTGACGATGCGC 61.421 55.000 0.00 0.00 46.83 6.09
313 314 2.665777 ATCGGAAAGTGACGATGCG 58.334 52.632 0.00 0.00 46.83 4.73
317 318 2.232696 TGGATCAATCGGAAAGTGACGA 59.767 45.455 0.00 0.00 43.85 4.20
318 319 2.604914 CTGGATCAATCGGAAAGTGACG 59.395 50.000 0.00 0.00 0.00 4.35
321 322 2.611292 GAGCTGGATCAATCGGAAAGTG 59.389 50.000 0.00 0.00 0.00 3.16
322 323 2.503356 AGAGCTGGATCAATCGGAAAGT 59.497 45.455 0.00 0.00 0.00 2.66
323 324 3.191078 AGAGCTGGATCAATCGGAAAG 57.809 47.619 0.00 0.00 0.00 2.62
324 325 3.960755 TCTAGAGCTGGATCAATCGGAAA 59.039 43.478 0.00 0.00 0.00 3.13
325 326 3.566351 TCTAGAGCTGGATCAATCGGAA 58.434 45.455 0.00 0.00 0.00 4.30
327 328 4.533919 AATCTAGAGCTGGATCAATCGG 57.466 45.455 0.00 0.00 30.11 4.18
328 329 6.096705 AGGATAATCTAGAGCTGGATCAATCG 59.903 42.308 0.00 0.00 30.56 3.34
329 330 7.422465 AGGATAATCTAGAGCTGGATCAATC 57.578 40.000 0.00 4.39 30.11 2.67
330 331 7.237263 ACAAGGATAATCTAGAGCTGGATCAAT 59.763 37.037 0.00 0.00 30.11 2.57
332 333 6.080682 ACAAGGATAATCTAGAGCTGGATCA 58.919 40.000 0.00 0.00 30.11 2.92
333 334 6.603940 ACAAGGATAATCTAGAGCTGGATC 57.396 41.667 0.00 0.00 30.11 3.36
354 4126 9.031537 TCTGAGGTGTAGATATGTAGAAAAACA 57.968 33.333 0.00 0.00 0.00 2.83
355 4128 9.871238 TTCTGAGGTGTAGATATGTAGAAAAAC 57.129 33.333 0.00 0.00 0.00 2.43
404 4179 8.700644 GCTCGAACTATACAAAAATGATCGTAT 58.299 33.333 0.00 0.00 0.00 3.06
443 4224 4.399004 ACAGGATTGTAGAGCTAGCAAG 57.601 45.455 18.83 0.00 35.25 4.01
444 4225 4.020218 ACAACAGGATTGTAGAGCTAGCAA 60.020 41.667 18.83 1.69 36.23 3.91
445 4226 3.515502 ACAACAGGATTGTAGAGCTAGCA 59.484 43.478 18.83 0.00 36.23 3.49
446 4227 4.130286 ACAACAGGATTGTAGAGCTAGC 57.870 45.455 6.62 6.62 36.23 3.42
447 4228 6.458232 AGTACAACAGGATTGTAGAGCTAG 57.542 41.667 0.00 0.00 36.23 3.42
448 4229 9.809395 ATATAGTACAACAGGATTGTAGAGCTA 57.191 33.333 0.00 0.39 36.23 3.32
449 4230 8.713708 ATATAGTACAACAGGATTGTAGAGCT 57.286 34.615 0.00 0.00 36.23 4.09
461 4242 6.436261 CCGTCAGGTGTATATAGTACAACAG 58.564 44.000 6.08 0.00 37.59 3.16
508 4297 8.909923 TGACAGGTCGATTCTATACATTCTTAA 58.090 33.333 0.00 0.00 0.00 1.85
571 4374 5.184479 GCTCGACCTCTACTCTCTAGAGATA 59.816 48.000 22.59 14.94 44.74 1.98
589 4395 2.030717 TCTTGTCAACTCTCTGCTCGAC 60.031 50.000 0.00 0.00 0.00 4.20
669 5016 4.880164 ACAACTGCCCCTAGAGATAACTA 58.120 43.478 0.00 0.00 0.00 2.24
670 5017 3.725634 ACAACTGCCCCTAGAGATAACT 58.274 45.455 0.00 0.00 0.00 2.24
671 5018 4.192317 CAACAACTGCCCCTAGAGATAAC 58.808 47.826 0.00 0.00 0.00 1.89
672 5019 3.844211 ACAACAACTGCCCCTAGAGATAA 59.156 43.478 0.00 0.00 0.00 1.75
673 5020 3.450904 ACAACAACTGCCCCTAGAGATA 58.549 45.455 0.00 0.00 0.00 1.98
675 5022 1.623811 GACAACAACTGCCCCTAGAGA 59.376 52.381 0.00 0.00 0.00 3.10
676 5023 1.625818 AGACAACAACTGCCCCTAGAG 59.374 52.381 0.00 0.00 0.00 2.43
677 5024 1.623811 GAGACAACAACTGCCCCTAGA 59.376 52.381 0.00 0.00 0.00 2.43
678 5025 1.347707 TGAGACAACAACTGCCCCTAG 59.652 52.381 0.00 0.00 0.00 3.02
679 5026 1.429930 TGAGACAACAACTGCCCCTA 58.570 50.000 0.00 0.00 0.00 3.53
680 5027 0.773644 ATGAGACAACAACTGCCCCT 59.226 50.000 0.00 0.00 0.00 4.79
681 5028 1.620822 AATGAGACAACAACTGCCCC 58.379 50.000 0.00 0.00 0.00 5.80
682 5029 3.068024 TCAAAATGAGACAACAACTGCCC 59.932 43.478 0.00 0.00 0.00 5.36
683 5030 4.305989 TCAAAATGAGACAACAACTGCC 57.694 40.909 0.00 0.00 0.00 4.85
684 5031 4.682860 CCATCAAAATGAGACAACAACTGC 59.317 41.667 0.00 0.00 34.61 4.40
685 5032 6.075762 TCCATCAAAATGAGACAACAACTG 57.924 37.500 0.00 0.00 34.61 3.16
686 5033 6.348786 CGATCCATCAAAATGAGACAACAACT 60.349 38.462 0.00 0.00 34.61 3.16
687 5034 5.796935 CGATCCATCAAAATGAGACAACAAC 59.203 40.000 0.00 0.00 34.61 3.32
688 5035 5.704978 TCGATCCATCAAAATGAGACAACAA 59.295 36.000 0.00 0.00 34.61 2.83
689 5036 5.244755 TCGATCCATCAAAATGAGACAACA 58.755 37.500 0.00 0.00 34.61 3.33
692 5039 5.059161 GGATCGATCCATCAAAATGAGACA 58.941 41.667 34.65 0.00 46.38 3.41
715 5068 2.076100 TCCGAAAAGTAGTGCATGCTG 58.924 47.619 20.33 0.00 0.00 4.41
740 5093 1.078709 ATGTGAAAGTGATGGACGCG 58.921 50.000 3.53 3.53 0.00 6.01
816 5215 7.980062 TCGATATGATCAGATCAACTAGCTAC 58.020 38.462 25.62 0.63 43.50 3.58
947 5368 5.771666 AGCTAACCTTGTGTACAGTACAGTA 59.228 40.000 14.03 3.71 39.77 2.74
948 5369 4.587684 AGCTAACCTTGTGTACAGTACAGT 59.412 41.667 14.03 5.64 39.77 3.55
949 5370 5.135508 AGCTAACCTTGTGTACAGTACAG 57.864 43.478 14.03 5.00 39.77 2.74
950 5371 5.303589 AGAAGCTAACCTTGTGTACAGTACA 59.696 40.000 9.51 9.51 32.78 2.90
951 5372 5.634020 CAGAAGCTAACCTTGTGTACAGTAC 59.366 44.000 3.49 3.49 39.34 2.73
999 5423 1.012086 CGACGACGAGACCCTTCATA 58.988 55.000 0.00 0.00 42.66 2.15
1023 5447 4.129737 ACGATCACGAGGCCCACG 62.130 66.667 16.58 16.58 42.66 4.94
1024 5448 2.202756 GACGATCACGAGGCCCAC 60.203 66.667 0.00 0.00 42.66 4.61
1263 5693 9.597170 GTTCTGAGCACATGATGATGTATATAT 57.403 33.333 0.00 0.00 41.12 0.86
1264 5694 8.037166 GGTTCTGAGCACATGATGATGTATATA 58.963 37.037 0.00 0.00 41.12 0.86
1289 5719 4.066490 TGGTAAATATTATTCCCGCACGG 58.934 43.478 1.02 1.02 0.00 4.94
1290 5720 5.410132 TCATGGTAAATATTATTCCCGCACG 59.590 40.000 0.00 0.00 0.00 5.34
1357 5808 1.677552 GCTCCTCTCGAACCCCAAA 59.322 57.895 0.00 0.00 0.00 3.28
1358 5809 2.291043 GGCTCCTCTCGAACCCCAA 61.291 63.158 0.00 0.00 0.00 4.12
1381 5832 2.307098 AGATTTCAGCACCAGGTAAGCT 59.693 45.455 0.00 0.00 39.63 3.74
1420 5871 2.259818 CCTCTCGTCACAGCGCTT 59.740 61.111 7.50 0.00 0.00 4.68
1427 5878 0.680280 TAGCTCACCCCTCTCGTCAC 60.680 60.000 0.00 0.00 0.00 3.67
1525 5980 4.642885 GGCTACCTGATCTAGCACCTATAG 59.357 50.000 12.88 0.00 38.75 1.31
1530 5985 1.710816 AGGCTACCTGATCTAGCACC 58.289 55.000 12.88 0.19 38.75 5.01
1541 5996 2.039879 ACGAAATGGTGAAAGGCTACCT 59.960 45.455 6.50 0.00 37.84 3.08
1542 5997 2.161609 CACGAAATGGTGAAAGGCTACC 59.838 50.000 0.00 0.00 40.38 3.18
1543 5998 2.812011 ACACGAAATGGTGAAAGGCTAC 59.188 45.455 2.45 0.00 40.38 3.58
1544 5999 3.134574 ACACGAAATGGTGAAAGGCTA 57.865 42.857 2.45 0.00 40.38 3.93
1551 6006 2.136728 CAACCGTACACGAAATGGTGA 58.863 47.619 2.76 0.00 43.02 4.02
1577 6032 9.185192 CTACAAACAAATCTTCTGGAACAAATC 57.815 33.333 0.00 0.00 38.70 2.17
1644 6209 3.949132 TGGCAACTTTGGAAAAGCTTTT 58.051 36.364 24.08 24.08 37.61 2.27
1742 6328 1.618640 GACGGAGAGCGTGCACTTTC 61.619 60.000 16.19 11.97 0.00 2.62
1811 6397 0.535102 CTGGTTCCACGTTCCAGCTT 60.535 55.000 11.19 0.00 41.46 3.74
1858 6453 9.314321 CCAGTACGAGACAACTTGATTATTATT 57.686 33.333 0.00 0.00 0.00 1.40
1860 6455 7.833786 ACCAGTACGAGACAACTTGATTATTA 58.166 34.615 0.00 0.00 0.00 0.98
1861 6456 6.698380 ACCAGTACGAGACAACTTGATTATT 58.302 36.000 0.00 0.00 0.00 1.40
1862 6457 6.282199 ACCAGTACGAGACAACTTGATTAT 57.718 37.500 0.00 0.00 0.00 1.28
1863 6458 5.717078 ACCAGTACGAGACAACTTGATTA 57.283 39.130 0.00 0.00 0.00 1.75
1864 6459 4.602340 ACCAGTACGAGACAACTTGATT 57.398 40.909 0.00 0.00 0.00 2.57
1865 6460 5.717078 TTACCAGTACGAGACAACTTGAT 57.283 39.130 0.00 0.00 0.00 2.57
1866 6461 5.717078 ATTACCAGTACGAGACAACTTGA 57.283 39.130 0.00 0.00 0.00 3.02
1867 6462 7.974501 AGATTATTACCAGTACGAGACAACTTG 59.025 37.037 0.00 0.00 0.00 3.16
1868 6463 8.064336 AGATTATTACCAGTACGAGACAACTT 57.936 34.615 0.00 0.00 0.00 2.66
1869 6464 7.642082 AGATTATTACCAGTACGAGACAACT 57.358 36.000 0.00 0.00 0.00 3.16
1870 6465 9.962783 ATTAGATTATTACCAGTACGAGACAAC 57.037 33.333 0.00 0.00 0.00 3.32
1900 6509 7.020010 CGTAACTACTAGTACAGGACAACTTG 58.980 42.308 0.00 0.00 0.00 3.16
1909 6518 9.861138 GTGATGATTACGTAACTACTAGTACAG 57.139 37.037 10.81 0.00 0.00 2.74
1945 6659 4.340894 TCATTTGCGTTCAGATTACTGC 57.659 40.909 0.00 0.00 43.17 4.40
1954 6668 5.177511 TGTTGTTGTTTTTCATTTGCGTTCA 59.822 32.000 0.00 0.00 0.00 3.18
1955 6669 5.612865 TGTTGTTGTTTTTCATTTGCGTTC 58.387 33.333 0.00 0.00 0.00 3.95
1958 6672 5.377358 TGTTGTTGTTGTTTTTCATTTGCG 58.623 33.333 0.00 0.00 0.00 4.85
1959 6673 6.369799 ACTGTTGTTGTTGTTTTTCATTTGC 58.630 32.000 0.00 0.00 0.00 3.68
1964 6678 8.994429 ATCATTACTGTTGTTGTTGTTTTTCA 57.006 26.923 0.00 0.00 0.00 2.69
1965 6679 9.081997 TGATCATTACTGTTGTTGTTGTTTTTC 57.918 29.630 0.00 0.00 0.00 2.29
1966 6680 8.994429 TGATCATTACTGTTGTTGTTGTTTTT 57.006 26.923 0.00 0.00 0.00 1.94
1968 6682 8.994429 TTTGATCATTACTGTTGTTGTTGTTT 57.006 26.923 0.00 0.00 0.00 2.83
1974 6688 6.142798 GTGTGCTTTGATCATTACTGTTGTTG 59.857 38.462 0.00 0.00 0.00 3.33
1977 6691 5.156355 GGTGTGCTTTGATCATTACTGTTG 58.844 41.667 0.00 0.00 0.00 3.33
1994 6708 8.560374 GGAGAAGATTAATTACTATTGGTGTGC 58.440 37.037 0.00 0.00 0.00 4.57
2027 6741 8.389603 CAACAACACTTGCAGTTAATTTGAATT 58.610 29.630 0.00 0.00 0.00 2.17
2028 6742 7.548780 ACAACAACACTTGCAGTTAATTTGAAT 59.451 29.630 10.16 0.00 0.00 2.57
2032 6746 6.393990 TCACAACAACACTTGCAGTTAATTT 58.606 32.000 0.00 0.00 0.00 1.82
2061 6800 7.797121 AATTTGAATTAGAAACCACAGGGAT 57.203 32.000 0.00 0.00 38.05 3.85
2092 6832 8.019094 ACATGAAGTTACAGCCGTTTAATTTAC 58.981 33.333 0.00 0.00 0.00 2.01
2106 6859 5.007626 GCAACTCTTGTGACATGAAGTTACA 59.992 40.000 0.00 0.00 44.01 2.41
2253 7033 8.905850 AGTAGGTTGAGCTAGTTATTAGAGTTC 58.094 37.037 0.00 0.00 0.00 3.01
2286 7066 4.235939 TCTGCATGCAAAACACGTAAAT 57.764 36.364 22.88 0.00 0.00 1.40
2287 7067 3.699779 TCTGCATGCAAAACACGTAAA 57.300 38.095 22.88 0.00 0.00 2.01
2291 7071 0.771756 CGTTCTGCATGCAAAACACG 59.228 50.000 30.52 24.76 28.23 4.49
2390 7170 3.118956 CGAGGAGCTTGGAGACTTTATGT 60.119 47.826 0.00 0.00 0.00 2.29
2491 7271 0.386113 GACGAGGGTGGCATAGAGTC 59.614 60.000 0.00 0.00 0.00 3.36
2534 7314 0.880278 CGCCCATCCCATACAGTTCG 60.880 60.000 0.00 0.00 0.00 3.95
2537 7317 2.510906 GCGCCCATCCCATACAGT 59.489 61.111 0.00 0.00 0.00 3.55
2564 7344 2.842058 CCAGGGCTGATGATCCCC 59.158 66.667 0.00 0.00 43.67 4.81
2729 7509 1.528776 GGAGTCGGCGAGGGAGTAT 60.529 63.158 11.20 0.00 0.00 2.12
2876 7656 3.604202 GCGTACACATCGCGGTCG 61.604 66.667 6.13 0.00 43.94 4.79
2891 7671 1.112459 GCACGTTGTCAAAGAAAGCG 58.888 50.000 5.46 0.00 0.00 4.68
2963 7743 1.005037 TGTGGTGATCTGTGTCGGC 60.005 57.895 0.00 0.00 0.00 5.54
3008 7788 7.571025 TCAAGGAATCAATCAATCATCTCTGA 58.429 34.615 0.00 0.00 35.41 3.27
3044 7824 5.355596 ACCGAAGAGAATCAATCATGTCTC 58.644 41.667 0.00 0.00 37.82 3.36
3157 7948 9.167311 CACTAAGATTTACTCAGCCATTTACTT 57.833 33.333 0.00 0.00 0.00 2.24
3164 7955 3.199946 CCCCACTAAGATTTACTCAGCCA 59.800 47.826 0.00 0.00 0.00 4.75
3196 7987 8.858186 GGCTAGAAACGACTAAAACTTAGTTAG 58.142 37.037 0.00 0.00 35.16 2.34
3198 7989 6.364435 CGGCTAGAAACGACTAAAACTTAGTT 59.636 38.462 0.00 0.00 0.00 2.24
3209 8000 3.018149 AGAAGATCGGCTAGAAACGACT 58.982 45.455 6.74 4.73 42.39 4.18
3213 8004 7.043258 GCTAACTTTAGAAGATCGGCTAGAAAC 60.043 40.741 0.00 0.00 32.47 2.78
3253 8091 2.745884 CGCCCACGCAATCCTTCA 60.746 61.111 0.00 0.00 34.03 3.02
3290 8128 3.047718 CTCTACCGCCGCTTCGTCA 62.048 63.158 0.00 0.00 0.00 4.35
3298 8136 0.872021 GACAAGATGCTCTACCGCCG 60.872 60.000 0.00 0.00 0.00 6.46
3326 8169 4.452733 GGAGGTCAGCCCGTTCCG 62.453 72.222 0.00 0.00 38.74 4.30
3331 8174 2.765807 ATGGAGGAGGTCAGCCCG 60.766 66.667 0.00 0.00 38.74 6.13
3334 8177 2.191641 GCCATGGAGGAGGTCAGC 59.808 66.667 18.40 0.00 41.22 4.26
3336 8179 3.785859 GCGCCATGGAGGAGGTCA 61.786 66.667 18.40 0.00 41.22 4.02
3360 8203 3.052082 CCTGGTGCTTGTCGCTGG 61.052 66.667 0.00 0.00 40.11 4.85
3375 8218 3.424105 GGCTGAATGGAGGCCCCT 61.424 66.667 0.00 0.00 39.96 4.79
3388 8231 2.667418 CCACTCCTCCTGTGGCTG 59.333 66.667 0.00 0.00 46.73 4.85
3403 8246 4.619320 CACCCCAAGCCCAAGCCA 62.619 66.667 0.00 0.00 41.25 4.75
3419 8286 2.354704 GGCATGCACTGTTCTACTACCA 60.355 50.000 21.36 0.00 0.00 3.25
3454 8321 1.537814 ATGCCAGGTTCGTGACGGTA 61.538 55.000 4.70 0.00 0.00 4.02
3455 8322 1.537814 TATGCCAGGTTCGTGACGGT 61.538 55.000 4.70 0.00 0.00 4.83
3458 8325 0.108992 TCGTATGCCAGGTTCGTGAC 60.109 55.000 0.00 0.00 0.00 3.67
3481 8348 1.454370 GATCGCGTGACGTCGACTTC 61.454 60.000 21.96 14.69 44.19 3.01
3559 8426 3.901797 AAGCCGAAGACCCAAGCCG 62.902 63.158 0.00 0.00 0.00 5.52
3629 8519 1.674322 GTTGCGGTATGGCAGTGGT 60.674 57.895 0.00 0.00 44.94 4.16
3666 8556 2.033194 GTGTGTGGCCGGTAGAAGC 61.033 63.158 1.90 0.00 0.00 3.86
3672 8562 1.525995 CTTTCAGTGTGTGGCCGGT 60.526 57.895 1.90 0.00 0.00 5.28
3704 8594 2.996621 GTGAATCCCTCTTGTCAACGAG 59.003 50.000 0.00 5.52 0.00 4.18
3709 8599 1.967779 TCACGTGAATCCCTCTTGTCA 59.032 47.619 17.62 0.00 0.00 3.58
3716 8606 1.215647 GCGACTCACGTGAATCCCT 59.784 57.895 20.30 0.59 44.60 4.20
3717 8607 3.782042 GCGACTCACGTGAATCCC 58.218 61.111 20.30 8.68 44.60 3.85
3726 8616 4.424566 TAACCGGCCGCGACTCAC 62.425 66.667 22.85 0.00 0.00 3.51
3727 8617 4.424566 GTAACCGGCCGCGACTCA 62.425 66.667 22.85 0.00 0.00 3.41
3728 8618 3.919973 TTGTAACCGGCCGCGACTC 62.920 63.158 22.85 9.09 0.00 3.36
3729 8619 3.927163 CTTGTAACCGGCCGCGACT 62.927 63.158 22.85 5.62 0.00 4.18
3730 8620 3.484547 CTTGTAACCGGCCGCGAC 61.485 66.667 22.85 17.17 0.00 5.19
3731 8621 3.993584 ACTTGTAACCGGCCGCGA 61.994 61.111 22.85 4.74 0.00 5.87
3732 8622 3.784412 CACTTGTAACCGGCCGCG 61.784 66.667 22.85 16.22 0.00 6.46
3733 8623 3.428282 CCACTTGTAACCGGCCGC 61.428 66.667 22.85 6.58 0.00 6.53
3734 8624 2.744709 CCCACTTGTAACCGGCCG 60.745 66.667 21.04 21.04 0.00 6.13
3735 8625 1.969589 CACCCACTTGTAACCGGCC 60.970 63.158 0.00 0.00 0.00 6.13
3736 8626 0.820482 AACACCCACTTGTAACCGGC 60.820 55.000 0.00 0.00 0.00 6.13
3737 8627 1.232119 GAACACCCACTTGTAACCGG 58.768 55.000 0.00 0.00 0.00 5.28
3738 8628 1.600485 GTGAACACCCACTTGTAACCG 59.400 52.381 0.00 0.00 34.38 4.44
3739 8629 1.600485 CGTGAACACCCACTTGTAACC 59.400 52.381 0.00 0.00 35.02 2.85
3740 8630 2.031191 CACGTGAACACCCACTTGTAAC 59.969 50.000 10.90 0.00 33.34 2.50
3741 8631 2.093606 TCACGTGAACACCCACTTGTAA 60.094 45.455 17.62 0.00 37.51 2.41
3742 8632 1.481363 TCACGTGAACACCCACTTGTA 59.519 47.619 17.62 0.00 37.51 2.41
3743 8633 0.250793 TCACGTGAACACCCACTTGT 59.749 50.000 17.62 0.00 37.51 3.16
3744 8634 1.330521 CTTCACGTGAACACCCACTTG 59.669 52.381 26.53 10.17 37.57 3.16
3745 8635 1.208535 TCTTCACGTGAACACCCACTT 59.791 47.619 26.53 0.00 35.02 3.16
3746 8636 0.828022 TCTTCACGTGAACACCCACT 59.172 50.000 26.53 0.00 35.02 4.00
3747 8637 1.658994 TTCTTCACGTGAACACCCAC 58.341 50.000 26.53 0.00 0.00 4.61
3748 8638 2.404923 TTTCTTCACGTGAACACCCA 57.595 45.000 26.53 6.02 0.00 4.51
3749 8639 2.681344 AGTTTTCTTCACGTGAACACCC 59.319 45.455 26.53 13.19 0.00 4.61
3750 8640 4.351131 AAGTTTTCTTCACGTGAACACC 57.649 40.909 26.53 12.54 34.76 4.16
3751 8641 7.848491 AGTATAAGTTTTCTTCACGTGAACAC 58.152 34.615 26.53 18.76 40.91 3.32
3752 8642 7.096353 CGAGTATAAGTTTTCTTCACGTGAACA 60.096 37.037 26.53 14.77 40.91 3.18
3753 8643 7.218560 CGAGTATAAGTTTTCTTCACGTGAAC 58.781 38.462 26.53 17.21 40.91 3.18
3754 8644 6.364165 CCGAGTATAAGTTTTCTTCACGTGAA 59.636 38.462 28.07 28.07 40.91 3.18
3755 8645 5.860182 CCGAGTATAAGTTTTCTTCACGTGA 59.140 40.000 15.76 15.76 40.91 4.35
3756 8646 5.061808 CCCGAGTATAAGTTTTCTTCACGTG 59.938 44.000 9.94 9.94 40.91 4.49
3757 8647 5.166398 CCCGAGTATAAGTTTTCTTCACGT 58.834 41.667 0.00 0.00 40.91 4.49
3758 8648 4.032558 GCCCGAGTATAAGTTTTCTTCACG 59.967 45.833 0.00 0.00 40.91 4.35
3759 8649 4.032558 CGCCCGAGTATAAGTTTTCTTCAC 59.967 45.833 0.00 0.00 40.91 3.18
3760 8650 4.082081 TCGCCCGAGTATAAGTTTTCTTCA 60.082 41.667 0.00 0.00 40.91 3.02
3761 8651 4.427312 TCGCCCGAGTATAAGTTTTCTTC 58.573 43.478 0.00 0.00 40.91 2.87
3762 8652 4.430908 CTCGCCCGAGTATAAGTTTTCTT 58.569 43.478 9.41 0.00 39.21 2.52
3763 8653 4.043037 CTCGCCCGAGTATAAGTTTTCT 57.957 45.455 9.41 0.00 37.47 2.52
3775 8665 4.554363 CACCGCTACTCGCCCGAG 62.554 72.222 15.46 15.46 46.91 4.63
3780 8670 2.229690 TTTACCCCACCGCTACTCGC 62.230 60.000 0.00 0.00 36.73 5.03
3781 8671 0.247185 TTTTACCCCACCGCTACTCG 59.753 55.000 0.00 0.00 38.08 4.18
3782 8672 2.477845 TTTTTACCCCACCGCTACTC 57.522 50.000 0.00 0.00 0.00 2.59
3783 8673 3.118149 CCTATTTTTACCCCACCGCTACT 60.118 47.826 0.00 0.00 0.00 2.57
3784 8674 3.208594 CCTATTTTTACCCCACCGCTAC 58.791 50.000 0.00 0.00 0.00 3.58
3785 8675 2.845586 ACCTATTTTTACCCCACCGCTA 59.154 45.455 0.00 0.00 0.00 4.26
3786 8676 1.637035 ACCTATTTTTACCCCACCGCT 59.363 47.619 0.00 0.00 0.00 5.52
3787 8677 1.746787 CACCTATTTTTACCCCACCGC 59.253 52.381 0.00 0.00 0.00 5.68
3788 8678 1.746787 GCACCTATTTTTACCCCACCG 59.253 52.381 0.00 0.00 0.00 4.94
3789 8679 2.104967 GGCACCTATTTTTACCCCACC 58.895 52.381 0.00 0.00 0.00 4.61
3790 8680 3.095912 AGGCACCTATTTTTACCCCAC 57.904 47.619 0.00 0.00 0.00 4.61
3791 8681 3.335484 AGAAGGCACCTATTTTTACCCCA 59.665 43.478 0.00 0.00 0.00 4.96
3792 8682 3.977312 AGAAGGCACCTATTTTTACCCC 58.023 45.455 0.00 0.00 0.00 4.95
3793 8683 5.997843 TCTAGAAGGCACCTATTTTTACCC 58.002 41.667 0.00 0.00 0.00 3.69
3794 8684 6.486993 CCATCTAGAAGGCACCTATTTTTACC 59.513 42.308 0.09 0.00 0.00 2.85
3795 8685 7.280356 TCCATCTAGAAGGCACCTATTTTTAC 58.720 38.462 9.23 0.00 0.00 2.01
3796 8686 7.127339 ACTCCATCTAGAAGGCACCTATTTTTA 59.873 37.037 9.23 0.00 0.00 1.52
3797 8687 6.069381 ACTCCATCTAGAAGGCACCTATTTTT 60.069 38.462 9.23 0.00 0.00 1.94
3798 8688 5.430089 ACTCCATCTAGAAGGCACCTATTTT 59.570 40.000 9.23 0.00 0.00 1.82
3799 8689 4.971924 ACTCCATCTAGAAGGCACCTATTT 59.028 41.667 9.23 0.00 0.00 1.40
3800 8690 4.561752 ACTCCATCTAGAAGGCACCTATT 58.438 43.478 9.23 0.00 0.00 1.73
3801 8691 4.206244 ACTCCATCTAGAAGGCACCTAT 57.794 45.455 9.23 0.00 0.00 2.57
3802 8692 3.689872 ACTCCATCTAGAAGGCACCTA 57.310 47.619 9.23 0.00 0.00 3.08
3803 8693 2.559381 ACTCCATCTAGAAGGCACCT 57.441 50.000 9.23 0.00 0.00 4.00
3804 8694 3.301274 ACTACTCCATCTAGAAGGCACC 58.699 50.000 9.23 0.00 0.00 5.01
3805 8695 6.466885 TTTACTACTCCATCTAGAAGGCAC 57.533 41.667 9.23 0.00 0.00 5.01
3806 8696 6.668283 ACTTTTACTACTCCATCTAGAAGGCA 59.332 38.462 9.23 0.00 0.00 4.75
3807 8697 7.114866 ACTTTTACTACTCCATCTAGAAGGC 57.885 40.000 9.23 0.00 0.00 4.35
3808 8698 9.945904 AAAACTTTTACTACTCCATCTAGAAGG 57.054 33.333 7.74 7.74 0.00 3.46
3820 8710 9.905171 CGGTTAGAGAGTAAAACTTTTACTACT 57.095 33.333 21.70 22.36 35.54 2.57
3821 8711 9.133627 CCGGTTAGAGAGTAAAACTTTTACTAC 57.866 37.037 21.70 18.34 35.54 2.73
3822 8712 8.860088 ACCGGTTAGAGAGTAAAACTTTTACTA 58.140 33.333 21.70 8.21 35.54 1.82
3823 8713 7.730084 ACCGGTTAGAGAGTAAAACTTTTACT 58.270 34.615 21.79 21.79 37.89 2.24
3824 8714 7.953158 ACCGGTTAGAGAGTAAAACTTTTAC 57.047 36.000 14.27 14.27 0.00 2.01
3825 8715 8.962884 AAACCGGTTAGAGAGTAAAACTTTTA 57.037 30.769 22.60 0.00 0.00 1.52
3826 8716 7.870509 AAACCGGTTAGAGAGTAAAACTTTT 57.129 32.000 22.60 0.00 0.00 2.27
3827 8717 7.658982 CCTAAACCGGTTAGAGAGTAAAACTTT 59.341 37.037 22.60 0.80 41.70 2.66
3828 8718 7.015584 TCCTAAACCGGTTAGAGAGTAAAACTT 59.984 37.037 22.60 1.53 41.70 2.66
3829 8719 6.494835 TCCTAAACCGGTTAGAGAGTAAAACT 59.505 38.462 22.60 2.03 41.70 2.66
3830 8720 6.691508 TCCTAAACCGGTTAGAGAGTAAAAC 58.308 40.000 22.60 0.00 41.70 2.43
3831 8721 6.721208 TCTCCTAAACCGGTTAGAGAGTAAAA 59.279 38.462 27.87 14.10 41.70 1.52
3832 8722 6.248433 TCTCCTAAACCGGTTAGAGAGTAAA 58.752 40.000 27.87 14.36 41.70 2.01
3833 8723 5.819991 TCTCCTAAACCGGTTAGAGAGTAA 58.180 41.667 27.87 14.87 41.70 2.24
3834 8724 5.441718 TCTCCTAAACCGGTTAGAGAGTA 57.558 43.478 27.87 14.57 41.70 2.59
3835 8725 4.313020 TCTCCTAAACCGGTTAGAGAGT 57.687 45.455 27.87 14.26 41.70 3.24
3836 8726 5.452077 CCAATCTCCTAAACCGGTTAGAGAG 60.452 48.000 31.55 28.13 41.70 3.20
3837 8727 4.404715 CCAATCTCCTAAACCGGTTAGAGA 59.595 45.833 31.00 31.00 41.70 3.10
3838 8728 4.694339 CCAATCTCCTAAACCGGTTAGAG 58.306 47.826 22.60 24.33 41.70 2.43
3839 8729 3.118519 GCCAATCTCCTAAACCGGTTAGA 60.119 47.826 22.60 19.66 41.70 2.10
3840 8730 3.118371 AGCCAATCTCCTAAACCGGTTAG 60.118 47.826 22.60 14.52 39.25 2.34
3841 8731 2.841881 AGCCAATCTCCTAAACCGGTTA 59.158 45.455 22.60 3.51 0.00 2.85
3842 8732 1.633945 AGCCAATCTCCTAAACCGGTT 59.366 47.619 15.86 15.86 0.00 4.44
3843 8733 1.286248 AGCCAATCTCCTAAACCGGT 58.714 50.000 0.00 0.00 0.00 5.28
3844 8734 2.224305 CCTAGCCAATCTCCTAAACCGG 60.224 54.545 0.00 0.00 0.00 5.28
3845 8735 2.434702 ACCTAGCCAATCTCCTAAACCG 59.565 50.000 0.00 0.00 0.00 4.44
3846 8736 3.809905 CACCTAGCCAATCTCCTAAACC 58.190 50.000 0.00 0.00 0.00 3.27
3847 8737 3.206964 GCACCTAGCCAATCTCCTAAAC 58.793 50.000 0.00 0.00 37.23 2.01
3848 8738 3.560636 GCACCTAGCCAATCTCCTAAA 57.439 47.619 0.00 0.00 37.23 1.85
3860 8750 1.410882 CTCCTCTAACCAGCACCTAGC 59.589 57.143 0.00 0.00 46.19 3.42
3861 8751 2.691011 GTCTCCTCTAACCAGCACCTAG 59.309 54.545 0.00 0.00 0.00 3.02
3862 8752 2.312140 AGTCTCCTCTAACCAGCACCTA 59.688 50.000 0.00 0.00 0.00 3.08
3863 8753 1.077993 AGTCTCCTCTAACCAGCACCT 59.922 52.381 0.00 0.00 0.00 4.00
3864 8754 1.205893 CAGTCTCCTCTAACCAGCACC 59.794 57.143 0.00 0.00 0.00 5.01
3865 8755 1.205893 CCAGTCTCCTCTAACCAGCAC 59.794 57.143 0.00 0.00 0.00 4.40
3866 8756 1.561643 CCAGTCTCCTCTAACCAGCA 58.438 55.000 0.00 0.00 0.00 4.41
3867 8757 0.176910 GCCAGTCTCCTCTAACCAGC 59.823 60.000 0.00 0.00 0.00 4.85
3868 8758 1.205893 GTGCCAGTCTCCTCTAACCAG 59.794 57.143 0.00 0.00 0.00 4.00
3869 8759 1.267121 GTGCCAGTCTCCTCTAACCA 58.733 55.000 0.00 0.00 0.00 3.67
3870 8760 1.267121 TGTGCCAGTCTCCTCTAACC 58.733 55.000 0.00 0.00 0.00 2.85
3871 8761 2.563179 TCTTGTGCCAGTCTCCTCTAAC 59.437 50.000 0.00 0.00 0.00 2.34
3872 8762 2.828520 CTCTTGTGCCAGTCTCCTCTAA 59.171 50.000 0.00 0.00 0.00 2.10
3873 8763 2.225142 ACTCTTGTGCCAGTCTCCTCTA 60.225 50.000 0.00 0.00 0.00 2.43
3874 8764 1.265236 CTCTTGTGCCAGTCTCCTCT 58.735 55.000 0.00 0.00 0.00 3.69
3875 8765 0.972883 ACTCTTGTGCCAGTCTCCTC 59.027 55.000 0.00 0.00 0.00 3.71
3876 8766 2.310779 TACTCTTGTGCCAGTCTCCT 57.689 50.000 0.00 0.00 0.00 3.69
3877 8767 4.262249 GGATATACTCTTGTGCCAGTCTCC 60.262 50.000 0.00 0.00 0.00 3.71
3878 8768 4.342378 TGGATATACTCTTGTGCCAGTCTC 59.658 45.833 0.00 0.00 0.00 3.36
3879 8769 4.100189 GTGGATATACTCTTGTGCCAGTCT 59.900 45.833 0.00 0.00 0.00 3.24
3880 8770 4.372656 GTGGATATACTCTTGTGCCAGTC 58.627 47.826 0.00 0.00 0.00 3.51
3881 8771 3.134804 GGTGGATATACTCTTGTGCCAGT 59.865 47.826 0.00 0.00 0.00 4.00
3882 8772 3.733337 GGTGGATATACTCTTGTGCCAG 58.267 50.000 0.00 0.00 0.00 4.85
3883 8773 2.102420 CGGTGGATATACTCTTGTGCCA 59.898 50.000 0.00 0.00 0.00 4.92
3884 8774 2.548067 CCGGTGGATATACTCTTGTGCC 60.548 54.545 0.00 0.00 0.00 5.01
3885 8775 2.364324 TCCGGTGGATATACTCTTGTGC 59.636 50.000 0.00 0.00 0.00 4.57
3886 8776 3.637229 AGTCCGGTGGATATACTCTTGTG 59.363 47.826 0.00 0.00 32.73 3.33
3887 8777 3.890147 GAGTCCGGTGGATATACTCTTGT 59.110 47.826 0.00 0.00 34.95 3.16
3888 8778 3.256136 GGAGTCCGGTGGATATACTCTTG 59.744 52.174 14.67 0.00 37.36 3.02
3889 8779 3.498334 GGAGTCCGGTGGATATACTCTT 58.502 50.000 14.67 0.00 37.36 2.85
3890 8780 2.225066 GGGAGTCCGGTGGATATACTCT 60.225 54.545 14.67 0.00 37.36 3.24
3891 8781 2.169330 GGGAGTCCGGTGGATATACTC 58.831 57.143 0.00 4.88 36.64 2.59
3892 8782 1.203149 GGGGAGTCCGGTGGATATACT 60.203 57.143 0.00 0.00 32.73 2.12
3893 8783 1.264295 GGGGAGTCCGGTGGATATAC 58.736 60.000 0.00 0.00 32.73 1.47
3894 8784 0.115745 GGGGGAGTCCGGTGGATATA 59.884 60.000 0.00 0.00 32.73 0.86
3895 8785 1.152096 GGGGGAGTCCGGTGGATAT 60.152 63.158 0.00 0.00 32.73 1.63
3896 8786 2.284493 GGGGGAGTCCGGTGGATA 59.716 66.667 0.00 0.00 32.73 2.59
3949 8839 3.584052 CTAGTCGCCCCCGAGTCG 61.584 72.222 5.29 5.29 43.27 4.18
3950 8840 3.217743 CCTAGTCGCCCCCGAGTC 61.218 72.222 0.00 0.00 43.27 3.36
3952 8842 4.835891 ACCCTAGTCGCCCCCGAG 62.836 72.222 0.00 0.00 45.38 4.63
3953 8843 4.387343 AACCCTAGTCGCCCCCGA 62.387 66.667 0.00 0.00 42.01 5.14
3954 8844 3.846430 GAACCCTAGTCGCCCCCG 61.846 72.222 0.00 0.00 0.00 5.73
3955 8845 2.365237 AGAACCCTAGTCGCCCCC 60.365 66.667 0.00 0.00 0.00 5.40
3956 8846 2.901042 CAGAACCCTAGTCGCCCC 59.099 66.667 0.00 0.00 0.00 5.80
3957 8847 2.187163 GCAGAACCCTAGTCGCCC 59.813 66.667 0.00 0.00 0.00 6.13
3958 8848 2.202756 CGCAGAACCCTAGTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
3959 8849 2.202756 CCGCAGAACCCTAGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
3960 8850 2.202756 GCCGCAGAACCCTAGTCG 60.203 66.667 0.00 0.00 0.00 4.18
3961 8851 2.187163 GGCCGCAGAACCCTAGTC 59.813 66.667 0.00 0.00 0.00 2.59
3962 8852 3.771160 CGGCCGCAGAACCCTAGT 61.771 66.667 14.67 0.00 0.00 2.57
3987 8877 0.480252 GATGAAGGGAATGGAGGGGG 59.520 60.000 0.00 0.00 0.00 5.40
3988 8878 0.480252 GGATGAAGGGAATGGAGGGG 59.520 60.000 0.00 0.00 0.00 4.79
3989 8879 0.480252 GGGATGAAGGGAATGGAGGG 59.520 60.000 0.00 0.00 0.00 4.30
3990 8880 0.480252 GGGGATGAAGGGAATGGAGG 59.520 60.000 0.00 0.00 0.00 4.30
3991 8881 1.423161 GAGGGGATGAAGGGAATGGAG 59.577 57.143 0.00 0.00 0.00 3.86
3992 8882 1.522900 GAGGGGATGAAGGGAATGGA 58.477 55.000 0.00 0.00 0.00 3.41
3993 8883 0.109342 CGAGGGGATGAAGGGAATGG 59.891 60.000 0.00 0.00 0.00 3.16
3994 8884 0.536006 GCGAGGGGATGAAGGGAATG 60.536 60.000 0.00 0.00 0.00 2.67
3995 8885 1.709994 GGCGAGGGGATGAAGGGAAT 61.710 60.000 0.00 0.00 0.00 3.01
3996 8886 2.375345 GGCGAGGGGATGAAGGGAA 61.375 63.158 0.00 0.00 0.00 3.97
3997 8887 2.768344 GGCGAGGGGATGAAGGGA 60.768 66.667 0.00 0.00 0.00 4.20
3998 8888 4.241555 CGGCGAGGGGATGAAGGG 62.242 72.222 0.00 0.00 0.00 3.95
3999 8889 4.918201 GCGGCGAGGGGATGAAGG 62.918 72.222 12.98 0.00 0.00 3.46
4000 8890 3.854669 AGCGGCGAGGGGATGAAG 61.855 66.667 12.98 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.