AutoCloner

Multiple sequence alignment - TraesCS7A01G538000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G538000	chr7A	100.000	2513	0	0	1	2513	715246915	715244403	0.000000e+00	4641
1	TraesCS7A01G538000	chr7A	97.836	1895	38	2	118	2012	715578597	715576706	0.000000e+00	3269
2	TraesCS7A01G538000	chr7A	97.590	1701	36	3	118	1818	715437229	715435534	0.000000e+00	2909
3	TraesCS7A01G538000	chr7A	98.441	1026	16	0	987	2012	715662730	715661705	0.000000e+00	1807
4	TraesCS7A01G538000	chr7A	98.210	894	16	0	986	1879	715333786	715332893	0.000000e+00	1563
5	TraesCS7A01G538000	chr7A	98.465	782	9	2	118	899	715334564	715333786	0.000000e+00	1375
6	TraesCS7A01G538000	chr7A	97.564	698	13	2	1816	2513	715425505	715424812	0.000000e+00	1192
7	TraesCS7A01G538000	chr7A	94.309	123	7	0	1	123	92858590	92858468	3.300000e-44	189
8	TraesCS7A01G538000	chr7A	95.000	120	6	0	1	120	401405279	401405160	3.300000e-44	189
9	TraesCS7A01G538000	chr7A	95.000	120	6	0	1	120	492342960	492342841	3.300000e-44	189
10	TraesCS7A01G538000	chr7A	94.958	119	6	0	1	119	50272168	50272050	1.190000e-43	187
11	TraesCS7A01G538000	chr7A	100.000	60	0	0	1816	1875	715329361	715329302	7.350000e-21	111
12	TraesCS7A01G538000	chr7B	92.581	1550	74	14	982	2513	716977322	716978848	0.000000e+00	2187
13	TraesCS7A01G538000	chr7B	91.213	956	67	8	1573	2513	716984530	716985483	0.000000e+00	1284
14	TraesCS7A01G538000	chr7B	90.888	845	31	18	987	1808	716699889	716699068	0.000000e+00	1092
15	TraesCS7A01G538000	chr7B	92.846	671	47	1	1844	2513	716699070	716698400	0.000000e+00	972
16	TraesCS7A01G538000	chr3A	95.798	119	5	0	1	119	684741710	684741592	2.550000e-45	193
17	TraesCS7A01G538000	chr3A	94.958	119	6	0	1	119	412693665	412693547	1.190000e-43	187
18	TraesCS7A01G538000	chr3A	95.000	120	5	1	1	119	705945170	705945289	1.190000e-43	187
19	TraesCS7A01G538000	chr5A	95.000	120	6	0	1	120	174259706	174259825	3.300000e-44	189
20	TraesCS7A01G538000	chr5A	94.309	123	7	0	1	123	556722031	556722153	3.300000e-44	189

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G538000	chr7A	715244403	715246915	2512	True	4641.000000	4641	100.000000	1	2513	1	chr7A.!!$R5	2512
1	TraesCS7A01G538000	chr7A	715576706	715578597	1891	True	3269.000000	3269	97.836000	118	2012	1	chr7A.!!$R8	1894
2	TraesCS7A01G538000	chr7A	715435534	715437229	1695	True	2909.000000	2909	97.590000	118	1818	1	chr7A.!!$R7	1700
3	TraesCS7A01G538000	chr7A	715661705	715662730	1025	True	1807.000000	1807	98.441000	987	2012	1	chr7A.!!$R9	1025
4	TraesCS7A01G538000	chr7A	715424812	715425505	693	True	1192.000000	1192	97.564000	1816	2513	1	chr7A.!!$R6	697
5	TraesCS7A01G538000	chr7A	715329302	715334564	5262	True	1016.333333	1563	98.891667	118	1879	3	chr7A.!!$R10	1761
6	TraesCS7A01G538000	chr7B	716977322	716978848	1526	False	2187.000000	2187	92.581000	982	2513	1	chr7B.!!$F1	1531
7	TraesCS7A01G538000	chr7B	716984530	716985483	953	False	1284.000000	1284	91.213000	1573	2513	1	chr7B.!!$F2	940
8	TraesCS7A01G538000	chr7B	716698400	716699889	1489	True	1032.000000	1092	91.867000	987	2513	2	chr7B.!!$R1	1526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
152	153	0.321996	AGAGAAGTCGTCTTTGGGCC	59.678	55.0	0.0	0.0	36.41	5.8	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1619	1629	1.281867	AGATGGCCCGTGAAGAATCAA	59.718	47.619	0.0	0.0	37.3	2.57	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
26	27	8.574196	ACTTCAGATGTTTTATTTTCAAACCG	57.426	30.769	0.00	0.00	33.83	4.44
27	28	8.194769	ACTTCAGATGTTTTATTTTCAAACCGT	58.805	29.630	0.00	0.00	33.83	4.83
28	29	9.672086	CTTCAGATGTTTTATTTTCAAACCGTA	57.328	29.630	0.00	0.00	33.83	4.02
76	77	3.762407	AAGGTGGTAAAATTGGCAACC	57.238	42.857	0.00	0.00	0.00	3.77
77	78	2.970987	AGGTGGTAAAATTGGCAACCT	58.029	42.857	0.00	0.00	32.99	3.50
78	79	4.120946	AGGTGGTAAAATTGGCAACCTA	57.879	40.909	0.00	0.00	34.84	3.08
79	80	4.086457	AGGTGGTAAAATTGGCAACCTAG	58.914	43.478	0.00	0.00	34.84	3.02
80	81	3.194755	GGTGGTAAAATTGGCAACCTAGG	59.805	47.826	7.41	7.41	32.99	3.02
81	82	3.830178	GTGGTAAAATTGGCAACCTAGGT	59.170	43.478	9.21	9.21	32.99	3.08
82	83	5.011586	GTGGTAAAATTGGCAACCTAGGTA	58.988	41.667	16.67	0.00	32.99	3.08
83	84	5.655090	GTGGTAAAATTGGCAACCTAGGTAT	59.345	40.000	16.67	0.83	32.99	2.73
84	85	6.829811	GTGGTAAAATTGGCAACCTAGGTATA	59.170	38.462	16.67	0.00	32.99	1.47
85	86	6.829811	TGGTAAAATTGGCAACCTAGGTATAC	59.170	38.462	16.67	8.74	32.99	1.47
86	87	6.017687	GGTAAAATTGGCAACCTAGGTATACG	60.018	42.308	16.67	5.52	0.00	3.06
87	88	2.607631	TTGGCAACCTAGGTATACGC	57.392	50.000	16.67	15.11	0.00	4.42
88	89	1.487300	TGGCAACCTAGGTATACGCA	58.513	50.000	16.67	5.50	0.00	5.24
89	90	2.043992	TGGCAACCTAGGTATACGCAT	58.956	47.619	16.67	0.00	0.00	4.73
90	91	3.232662	TGGCAACCTAGGTATACGCATA	58.767	45.455	16.67	6.29	0.00	3.14
91	92	3.257375	TGGCAACCTAGGTATACGCATAG	59.743	47.826	16.67	0.00	0.00	2.23
92	93	3.508793	GGCAACCTAGGTATACGCATAGA	59.491	47.826	16.67	0.00	0.00	1.98
93	94	4.021719	GGCAACCTAGGTATACGCATAGAA	60.022	45.833	16.67	0.00	0.00	2.10
94	95	4.922103	GCAACCTAGGTATACGCATAGAAC	59.078	45.833	16.67	0.00	0.00	3.01
95	96	5.278858	GCAACCTAGGTATACGCATAGAACT	60.279	44.000	16.67	0.00	0.00	3.01
96	97	6.737899	GCAACCTAGGTATACGCATAGAACTT	60.738	42.308	16.67	0.00	0.00	2.66
97	98	6.328641	ACCTAGGTATACGCATAGAACTTG	57.671	41.667	14.41	0.00	0.00	3.16
98	99	5.832060	ACCTAGGTATACGCATAGAACTTGT	59.168	40.000	14.41	0.00	0.00	3.16
99	100	7.000472	ACCTAGGTATACGCATAGAACTTGTA	59.000	38.462	14.41	0.00	0.00	2.41
100	101	7.503566	ACCTAGGTATACGCATAGAACTTGTAA	59.496	37.037	14.41	0.00	0.00	2.41
101	102	8.355169	CCTAGGTATACGCATAGAACTTGTAAA	58.645	37.037	0.00	0.00	0.00	2.01
102	103	7.998753	AGGTATACGCATAGAACTTGTAAAC	57.001	36.000	0.00	0.00	0.00	2.01
103	104	7.779073	AGGTATACGCATAGAACTTGTAAACT	58.221	34.615	0.00	0.00	0.00	2.66
104	105	7.705325	AGGTATACGCATAGAACTTGTAAACTG	59.295	37.037	0.00	0.00	0.00	3.16
105	106	7.703621	GGTATACGCATAGAACTTGTAAACTGA	59.296	37.037	0.00	0.00	0.00	3.41
106	107	9.079833	GTATACGCATAGAACTTGTAAACTGAA	57.920	33.333	0.00	0.00	0.00	3.02
107	108	6.854496	ACGCATAGAACTTGTAAACTGAAA	57.146	33.333	0.00	0.00	0.00	2.69
108	109	6.656003	ACGCATAGAACTTGTAAACTGAAAC	58.344	36.000	0.00	0.00	0.00	2.78
109	110	5.783654	CGCATAGAACTTGTAAACTGAAACG	59.216	40.000	0.00	0.00	0.00	3.60
110	111	6.077838	GCATAGAACTTGTAAACTGAAACGG	58.922	40.000	0.00	0.00	0.00	4.44
111	112	6.073440	GCATAGAACTTGTAAACTGAAACGGA	60.073	38.462	0.00	0.00	0.00	4.69
112	113	5.986004	AGAACTTGTAAACTGAAACGGAG	57.014	39.130	0.00	0.00	0.00	4.63
113	114	4.814771	AGAACTTGTAAACTGAAACGGAGG	59.185	41.667	0.00	0.00	0.00	4.30
114	115	4.146745	ACTTGTAAACTGAAACGGAGGT	57.853	40.909	0.00	0.00	0.00	3.85
115	116	5.280654	ACTTGTAAACTGAAACGGAGGTA	57.719	39.130	0.00	0.00	0.00	3.08
116	117	5.295152	ACTTGTAAACTGAAACGGAGGTAG	58.705	41.667	0.00	0.00	0.00	3.18
141	142	5.455056	TGTGTCTTGGTCTAAGAGAAGTC	57.545	43.478	0.00	0.00	45.71	3.01
148	149	5.122512	TGGTCTAAGAGAAGTCGTCTTTG	57.877	43.478	0.00	0.00	36.41	2.77
152	153	0.321996	AGAGAAGTCGTCTTTGGGCC	59.678	55.000	0.00	0.00	36.41	5.80
153	154	0.321996	GAGAAGTCGTCTTTGGGCCT	59.678	55.000	4.53	0.00	36.41	5.19
154	155	1.549170	GAGAAGTCGTCTTTGGGCCTA	59.451	52.381	4.53	0.00	36.41	3.93
155	156	1.975680	AGAAGTCGTCTTTGGGCCTAA	59.024	47.619	4.53	0.00	29.66	2.69
484	485	8.404107	ACCATTACTAACAGCACAATAAAACT	57.596	30.769	0.00	0.00	0.00	2.66
877	878	7.048629	TCTTTGTTTGCATCAGGTTATTTCA	57.951	32.000	0.00	0.00	0.00	2.69
1614	1624	4.918583	GGCGATATAGTTTTCTCTCTTCCG	59.081	45.833	0.00	0.00	0.00	4.30
1615	1625	4.383351	GCGATATAGTTTTCTCTCTTCCGC	59.617	45.833	0.00	0.00	0.00	5.54
1619	1629	0.320508	GTTTTCTCTCTTCCGCGGGT	60.321	55.000	27.83	0.00	0.00	5.28
2403	2745	1.216941	ACCGCGACACCAAAACGTAG	61.217	55.000	8.23	0.00	0.00	3.51
2438	4469	1.839994	GAGATGTGAATCCCCTCCACA	59.160	52.381	0.00	0.00	43.77	4.17

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	9.030301	CGGTTTGAAAATAAAACATCTGAAGTT	57.970	29.630	0.00	0.00	38.91	2.66
2	3	8.574196	ACGGTTTGAAAATAAAACATCTGAAG	57.426	30.769	1.92	0.00	38.91	3.02
50	51	8.697292	GGTTGCCAATTTTACCACCTTAATATA	58.303	33.333	0.00	0.00	0.00	0.86
51	52	7.401782	AGGTTGCCAATTTTACCACCTTAATAT	59.598	33.333	0.00	0.00	33.02	1.28
52	53	6.726764	AGGTTGCCAATTTTACCACCTTAATA	59.273	34.615	0.00	0.00	33.02	0.98
53	54	5.546110	AGGTTGCCAATTTTACCACCTTAAT	59.454	36.000	0.00	0.00	33.02	1.40
54	55	4.902448	AGGTTGCCAATTTTACCACCTTAA	59.098	37.500	0.00	0.00	33.02	1.85
55	56	4.484912	AGGTTGCCAATTTTACCACCTTA	58.515	39.130	0.00	0.00	33.02	2.69
56	57	3.313791	AGGTTGCCAATTTTACCACCTT	58.686	40.909	0.00	0.00	33.02	3.50
57	58	2.970987	AGGTTGCCAATTTTACCACCT	58.029	42.857	0.00	0.00	33.02	4.00
58	59	3.194755	CCTAGGTTGCCAATTTTACCACC	59.805	47.826	0.00	0.00	33.02	4.61
59	60	3.830178	ACCTAGGTTGCCAATTTTACCAC	59.170	43.478	9.21	0.00	33.02	4.16
60	61	4.120946	ACCTAGGTTGCCAATTTTACCA	57.879	40.909	9.21	0.00	33.02	3.25
61	62	6.017687	CGTATACCTAGGTTGCCAATTTTACC	60.018	42.308	22.11	0.00	0.00	2.85
62	63	6.512253	GCGTATACCTAGGTTGCCAATTTTAC	60.512	42.308	22.11	1.58	0.00	2.01
63	64	5.528320	GCGTATACCTAGGTTGCCAATTTTA	59.472	40.000	22.11	0.00	0.00	1.52
64	65	4.337274	GCGTATACCTAGGTTGCCAATTTT	59.663	41.667	22.11	0.00	0.00	1.82
65	66	3.881089	GCGTATACCTAGGTTGCCAATTT	59.119	43.478	22.11	0.00	0.00	1.82
66	67	3.118186	TGCGTATACCTAGGTTGCCAATT	60.118	43.478	22.11	0.00	0.00	2.32
67	68	2.436542	TGCGTATACCTAGGTTGCCAAT	59.563	45.455	22.11	9.64	0.00	3.16
68	69	1.832366	TGCGTATACCTAGGTTGCCAA	59.168	47.619	22.11	0.75	0.00	4.52
69	70	1.487300	TGCGTATACCTAGGTTGCCA	58.513	50.000	22.11	1.21	0.00	4.92
70	71	2.833631	ATGCGTATACCTAGGTTGCC	57.166	50.000	22.11	7.02	0.00	4.52
71	72	4.778534	TCTATGCGTATACCTAGGTTGC	57.221	45.455	22.11	18.70	0.00	4.17
72	73	6.328641	AGTTCTATGCGTATACCTAGGTTG	57.671	41.667	22.11	9.15	0.00	3.77
73	74	6.323225	ACAAGTTCTATGCGTATACCTAGGTT	59.677	38.462	22.11	10.62	0.00	3.50
74	75	5.832060	ACAAGTTCTATGCGTATACCTAGGT	59.168	40.000	20.57	20.57	0.00	3.08
75	76	6.328641	ACAAGTTCTATGCGTATACCTAGG	57.671	41.667	7.41	7.41	0.00	3.02
76	77	9.178427	GTTTACAAGTTCTATGCGTATACCTAG	57.822	37.037	0.00	0.00	0.00	3.02
77	78	8.906867	AGTTTACAAGTTCTATGCGTATACCTA	58.093	33.333	0.00	0.00	0.00	3.08
78	79	7.705325	CAGTTTACAAGTTCTATGCGTATACCT	59.295	37.037	0.00	0.00	0.00	3.08
79	80	7.703621	TCAGTTTACAAGTTCTATGCGTATACC	59.296	37.037	0.00	0.00	0.00	2.73
80	81	8.624701	TCAGTTTACAAGTTCTATGCGTATAC	57.375	34.615	0.00	0.00	0.00	1.47
81	82	9.642327	TTTCAGTTTACAAGTTCTATGCGTATA	57.358	29.630	0.00	0.00	0.00	1.47
82	83	8.440833	GTTTCAGTTTACAAGTTCTATGCGTAT	58.559	33.333	0.00	0.00	0.00	3.06
83	84	7.358600	CGTTTCAGTTTACAAGTTCTATGCGTA	60.359	37.037	0.00	0.00	0.00	4.42
84	85	6.563381	CGTTTCAGTTTACAAGTTCTATGCGT	60.563	38.462	0.00	0.00	0.00	5.24
85	86	5.783654	CGTTTCAGTTTACAAGTTCTATGCG	59.216	40.000	0.00	0.00	0.00	4.73
86	87	6.073440	TCCGTTTCAGTTTACAAGTTCTATGC	60.073	38.462	0.00	0.00	0.00	3.14
87	88	7.360101	CCTCCGTTTCAGTTTACAAGTTCTATG	60.360	40.741	0.00	0.00	0.00	2.23
88	89	6.649557	CCTCCGTTTCAGTTTACAAGTTCTAT	59.350	38.462	0.00	0.00	0.00	1.98
89	90	5.987347	CCTCCGTTTCAGTTTACAAGTTCTA	59.013	40.000	0.00	0.00	0.00	2.10
90	91	4.814771	CCTCCGTTTCAGTTTACAAGTTCT	59.185	41.667	0.00	0.00	0.00	3.01
91	92	4.573607	ACCTCCGTTTCAGTTTACAAGTTC	59.426	41.667	0.00	0.00	0.00	3.01
92	93	4.520179	ACCTCCGTTTCAGTTTACAAGTT	58.480	39.130	0.00	0.00	0.00	2.66
93	94	4.146745	ACCTCCGTTTCAGTTTACAAGT	57.853	40.909	0.00	0.00	0.00	3.16
94	95	5.295152	ACTACCTCCGTTTCAGTTTACAAG	58.705	41.667	0.00	0.00	0.00	3.16
95	96	5.280654	ACTACCTCCGTTTCAGTTTACAA	57.719	39.130	0.00	0.00	0.00	2.41
96	97	4.942761	ACTACCTCCGTTTCAGTTTACA	57.057	40.909	0.00	0.00	0.00	2.41
97	98	6.309737	CACATACTACCTCCGTTTCAGTTTAC	59.690	42.308	0.00	0.00	0.00	2.01
98	99	6.015180	ACACATACTACCTCCGTTTCAGTTTA	60.015	38.462	0.00	0.00	0.00	2.01
99	100	5.221581	ACACATACTACCTCCGTTTCAGTTT	60.222	40.000	0.00	0.00	0.00	2.66
100	101	4.282703	ACACATACTACCTCCGTTTCAGTT	59.717	41.667	0.00	0.00	0.00	3.16
101	102	3.830755	ACACATACTACCTCCGTTTCAGT	59.169	43.478	0.00	0.00	0.00	3.41
102	103	4.158025	AGACACATACTACCTCCGTTTCAG	59.842	45.833	0.00	0.00	0.00	3.02
103	104	4.084287	AGACACATACTACCTCCGTTTCA	58.916	43.478	0.00	0.00	0.00	2.69
104	105	4.715527	AGACACATACTACCTCCGTTTC	57.284	45.455	0.00	0.00	0.00	2.78
105	106	4.322499	CCAAGACACATACTACCTCCGTTT	60.322	45.833	0.00	0.00	0.00	3.60
106	107	3.194968	CCAAGACACATACTACCTCCGTT	59.805	47.826	0.00	0.00	0.00	4.44
107	108	2.758979	CCAAGACACATACTACCTCCGT	59.241	50.000	0.00	0.00	0.00	4.69
108	109	2.758979	ACCAAGACACATACTACCTCCG	59.241	50.000	0.00	0.00	0.00	4.63
109	110	4.024670	AGACCAAGACACATACTACCTCC	58.975	47.826	0.00	0.00	0.00	4.30
110	111	6.602406	TCTTAGACCAAGACACATACTACCTC	59.398	42.308	0.00	0.00	38.39	3.85
111	112	6.491383	TCTTAGACCAAGACACATACTACCT	58.509	40.000	0.00	0.00	38.39	3.08
112	113	6.602406	TCTCTTAGACCAAGACACATACTACC	59.398	42.308	0.00	0.00	38.39	3.18
113	114	7.627298	TCTCTTAGACCAAGACACATACTAC	57.373	40.000	0.00	0.00	38.39	2.73
114	115	7.889073	ACTTCTCTTAGACCAAGACACATACTA	59.111	37.037	3.85	0.00	38.39	1.82
115	116	6.722129	ACTTCTCTTAGACCAAGACACATACT	59.278	38.462	3.85	0.00	38.39	2.12
116	117	6.926313	ACTTCTCTTAGACCAAGACACATAC	58.074	40.000	3.85	0.00	38.39	2.39
141	142	4.381185	GGGTTTATTTTAGGCCCAAAGACG	60.381	45.833	0.00	0.00	39.13	4.18
148	149	3.368635	CCGTTTGGGTTTATTTTAGGCCC	60.369	47.826	0.00	0.00	39.73	5.80
152	153	5.011586	TCCCTCCGTTTGGGTTTATTTTAG	58.988	41.667	0.00	0.00	44.84	1.85
153	154	4.995536	TCCCTCCGTTTGGGTTTATTTTA	58.004	39.130	0.00	0.00	44.84	1.52
154	155	3.830178	CTCCCTCCGTTTGGGTTTATTTT	59.170	43.478	0.00	0.00	44.84	1.82
155	156	3.181426	ACTCCCTCCGTTTGGGTTTATTT	60.181	43.478	0.00	0.00	44.84	1.40
484	485	9.424319	GAAATATCTGCGGACTCTATTGAATTA	57.576	33.333	0.00	0.00	0.00	1.40
496	497	4.130118	ACCTTGATGAAATATCTGCGGAC	58.870	43.478	0.00	0.00	0.00	4.79
949	950	5.051907	CGGAAAAGCACGATACATGTAGTAC	60.052	44.000	11.91	4.81	35.05	2.73
1614	1624	1.644786	CCCGTGAAGAATCAACCCGC	61.645	60.000	0.00	0.00	37.30	6.13
1615	1625	1.644786	GCCCGTGAAGAATCAACCCG	61.645	60.000	0.00	0.00	37.30	5.28
1619	1629	1.281867	AGATGGCCCGTGAAGAATCAA	59.718	47.619	0.00	0.00	37.30	2.57
2403	2745	2.492484	ACATCTCTCCTCCGTTGTGTAC	59.508	50.000	0.00	0.00	0.00	2.90
2438	4469	2.838225	CCGGTGATAGAGGGCGGT	60.838	66.667	0.00	0.00	0.00	5.68

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.