Multiple sequence alignment - TraesCS7A01G534600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G534600 chr7A 100.000 6091 0 0 1 6091 712439729 712445819 0.000000e+00 11249
1 TraesCS7A01G534600 chr7A 80.759 3373 540 70 1147 4471 712834873 712831562 0.000000e+00 2532
2 TraesCS7A01G534600 chr7A 81.507 2774 442 40 1719 4452 713122240 713119498 0.000000e+00 2215
3 TraesCS7A01G534600 chr7A 82.979 799 118 15 2748 3537 713134418 713133629 0.000000e+00 706
4 TraesCS7A01G534600 chr7A 74.639 1660 324 57 3624 5255 713133626 713132036 1.430000e-180 643
5 TraesCS7A01G534600 chr7A 88.276 290 32 2 5 294 101842096 101842383 4.520000e-91 346
6 TraesCS7A01G534600 chr7B 91.036 5656 348 81 301 5875 713459336 713453759 0.000000e+00 7489
7 TraesCS7A01G534600 chr7B 94.283 2239 97 3 3389 5624 713360278 713362488 0.000000e+00 3397
8 TraesCS7A01G534600 chr7B 82.129 3419 543 38 1078 4452 714598308 714594914 0.000000e+00 2867
9 TraesCS7A01G534600 chr7B 81.861 3385 546 36 1104 4451 714301481 714298128 0.000000e+00 2787
10 TraesCS7A01G534600 chr7B 81.926 3303 536 41 1186 4452 714461473 714458196 0.000000e+00 2736
11 TraesCS7A01G534600 chr7B 84.982 2517 322 31 2602 5092 713299566 713302052 0.000000e+00 2503
12 TraesCS7A01G534600 chr7B 80.732 3171 497 63 1915 5010 714359622 714356491 0.000000e+00 2366
13 TraesCS7A01G534600 chr7B 80.915 2557 425 32 1915 4438 714330019 714327493 0.000000e+00 1960
14 TraesCS7A01G534600 chr7B 80.531 2563 450 36 1915 4448 714474607 714472065 0.000000e+00 1923
15 TraesCS7A01G534600 chr7B 79.805 2466 406 60 2748 5168 714620786 714618368 0.000000e+00 1711
16 TraesCS7A01G534600 chr7B 83.373 1660 225 31 1104 2724 714622421 714620774 0.000000e+00 1489
17 TraesCS7A01G534600 chr7B 83.101 1509 178 48 419 1898 713297176 713298636 0.000000e+00 1303
18 TraesCS7A01G534600 chr7B 83.864 1320 163 33 674 1966 713358952 713360248 0.000000e+00 1212
19 TraesCS7A01G534600 chr7B 82.151 1255 193 20 1486 2721 714606701 714605459 0.000000e+00 1048
20 TraesCS7A01G534600 chr7B 80.577 1040 178 17 3426 4448 714520136 714519104 0.000000e+00 780
21 TraesCS7A01G534600 chr7B 83.061 797 121 13 2748 3537 714605468 714604679 0.000000e+00 712
22 TraesCS7A01G534600 chr7B 83.806 741 117 1 1147 1887 714360429 714359692 0.000000e+00 701
23 TraesCS7A01G534600 chr7B 80.941 808 124 20 1106 1891 714522449 714521650 4.040000e-171 612
24 TraesCS7A01G534600 chr7B 92.442 172 8 4 5707 5875 713376552 713376721 2.190000e-59 241
25 TraesCS7A01G534600 chr7B 86.420 162 9 7 5913 6071 713376713 713376864 1.360000e-36 165
26 TraesCS7A01G534600 chr7B 87.097 155 9 5 5918 6071 713453760 713453616 1.360000e-36 165
27 TraesCS7A01G534600 chr7D 89.370 5400 416 72 344 5679 618889815 618895120 0.000000e+00 6647
28 TraesCS7A01G534600 chr7D 82.304 3351 517 51 1148 4448 619156484 619153160 0.000000e+00 2833
29 TraesCS7A01G534600 chr1A 93.939 297 12 5 2 294 24431692 24431986 1.560000e-120 444
30 TraesCS7A01G534600 chr2A 93.603 297 13 5 2 294 30833247 30832953 7.250000e-119 438
31 TraesCS7A01G534600 chr3B 74.925 1005 189 40 2751 3734 814171762 814170800 9.510000e-108 401
32 TraesCS7A01G534600 chr1D 88.316 291 32 2 5 294 380203828 380203539 1.260000e-91 348
33 TraesCS7A01G534600 chr3D 88.276 290 32 2 5 293 416139277 416138989 4.520000e-91 346
34 TraesCS7A01G534600 chr3A 88.462 286 31 2 5 290 87927521 87927804 1.630000e-90 344
35 TraesCS7A01G534600 chr6A 88.014 292 32 3 5 294 596074685 596074395 5.850000e-90 342
36 TraesCS7A01G534600 chr4B 88.693 283 28 4 13 292 10788156 10787875 5.850000e-90 342
37 TraesCS7A01G534600 chr4A 88.276 290 29 4 5 292 375975500 375975214 5.850000e-90 342
38 TraesCS7A01G534600 chrUn 73.290 614 117 25 4537 5137 284686329 284685750 1.350000e-41 182


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G534600 chr7A 712439729 712445819 6090 False 11249.0 11249 100.0000 1 6091 1 chr7A.!!$F2 6090
1 TraesCS7A01G534600 chr7A 712831562 712834873 3311 True 2532.0 2532 80.7590 1147 4471 1 chr7A.!!$R1 3324
2 TraesCS7A01G534600 chr7A 713119498 713122240 2742 True 2215.0 2215 81.5070 1719 4452 1 chr7A.!!$R2 2733
3 TraesCS7A01G534600 chr7A 713132036 713134418 2382 True 674.5 706 78.8090 2748 5255 2 chr7A.!!$R3 2507
4 TraesCS7A01G534600 chr7B 713453616 713459336 5720 True 3827.0 7489 89.0665 301 6071 2 chr7B.!!$R6 5770
5 TraesCS7A01G534600 chr7B 714594914 714598308 3394 True 2867.0 2867 82.1290 1078 4452 1 chr7B.!!$R5 3374
6 TraesCS7A01G534600 chr7B 714298128 714301481 3353 True 2787.0 2787 81.8610 1104 4451 1 chr7B.!!$R1 3347
7 TraesCS7A01G534600 chr7B 714458196 714461473 3277 True 2736.0 2736 81.9260 1186 4452 1 chr7B.!!$R3 3266
8 TraesCS7A01G534600 chr7B 713358952 713362488 3536 False 2304.5 3397 89.0735 674 5624 2 chr7B.!!$F2 4950
9 TraesCS7A01G534600 chr7B 714327493 714330019 2526 True 1960.0 1960 80.9150 1915 4438 1 chr7B.!!$R2 2523
10 TraesCS7A01G534600 chr7B 714472065 714474607 2542 True 1923.0 1923 80.5310 1915 4448 1 chr7B.!!$R4 2533
11 TraesCS7A01G534600 chr7B 713297176 713302052 4876 False 1903.0 2503 84.0415 419 5092 2 chr7B.!!$F1 4673
12 TraesCS7A01G534600 chr7B 714618368 714622421 4053 True 1600.0 1711 81.5890 1104 5168 2 chr7B.!!$R10 4064
13 TraesCS7A01G534600 chr7B 714356491 714360429 3938 True 1533.5 2366 82.2690 1147 5010 2 chr7B.!!$R7 3863
14 TraesCS7A01G534600 chr7B 714604679 714606701 2022 True 880.0 1048 82.6060 1486 3537 2 chr7B.!!$R9 2051
15 TraesCS7A01G534600 chr7B 714519104 714522449 3345 True 696.0 780 80.7590 1106 4448 2 chr7B.!!$R8 3342
16 TraesCS7A01G534600 chr7D 618889815 618895120 5305 False 6647.0 6647 89.3700 344 5679 1 chr7D.!!$F1 5335
17 TraesCS7A01G534600 chr7D 619153160 619156484 3324 True 2833.0 2833 82.3040 1148 4448 1 chr7D.!!$R1 3300
18 TraesCS7A01G534600 chr3B 814170800 814171762 962 True 401.0 401 74.9250 2751 3734 1 chr3B.!!$R1 983

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
926 984 0.032678 ACCTCTGCGTGTTCTCTGTG 59.967 55.000 0.0 0.0 0.00 3.66 F
1761 1885 0.035739 TGGGAAAGACCACGTTAGCC 59.964 55.000 0.0 0.0 41.20 3.93 F
1909 2258 0.108424 AGCAGAAGTAGCAGCTTCCG 60.108 55.000 0.0 7.6 44.27 4.30 F
1910 2259 0.390472 GCAGAAGTAGCAGCTTCCGT 60.390 55.000 0.0 0.0 44.27 4.69 F
2315 2668 3.181443 ACCACCGAAGAAGAATGGAAAGT 60.181 43.478 0.0 0.0 34.38 2.66 F
3951 4497 3.181490 TGCATAGCCTTGTAGACAGTACG 60.181 47.826 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1890 2014 0.108424 CGGAAGCTGCTACTTCTGCT 60.108 55.000 0.90 0.0 43.95 4.24 R
3621 4149 1.079503 GCAACGTAAGCTCCTTCAGG 58.920 55.000 5.73 0.0 45.62 3.86 R
3829 4369 3.953612 ACACTGAGCTTTGGTGATTCAAA 59.046 39.130 17.34 0.0 35.60 2.69 R
4066 4621 6.286240 ACATGAACACAGCTCTCTTATACA 57.714 37.500 0.00 0.0 0.00 2.29 R
4094 4655 2.620115 ACTGACAAATCTTGCAGGTGTG 59.380 45.455 0.00 0.0 38.35 3.82 R
5896 6548 0.250467 TCTTCAACAGCTGCCTGACC 60.250 55.000 15.27 0.0 41.77 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 8.962884 TTAGCACACTCACATAATATCAATGT 57.037 30.769 0.00 0.00 38.08 2.71
46 47 8.599055 AGCACACTCACATAATATCAATGTAG 57.401 34.615 3.94 5.38 35.82 2.74
47 48 7.172190 AGCACACTCACATAATATCAATGTAGC 59.828 37.037 3.94 0.00 35.82 3.58
48 49 7.172190 GCACACTCACATAATATCAATGTAGCT 59.828 37.037 0.00 0.00 35.82 3.32
49 50 9.049523 CACACTCACATAATATCAATGTAGCTT 57.950 33.333 0.00 0.00 35.82 3.74
50 51 9.049523 ACACTCACATAATATCAATGTAGCTTG 57.950 33.333 0.00 0.00 35.82 4.01
51 52 9.049523 CACTCACATAATATCAATGTAGCTTGT 57.950 33.333 0.00 0.00 35.82 3.16
52 53 9.265901 ACTCACATAATATCAATGTAGCTTGTC 57.734 33.333 0.00 0.00 35.82 3.18
53 54 9.264719 CTCACATAATATCAATGTAGCTTGTCA 57.735 33.333 0.00 0.00 35.82 3.58
54 55 9.045223 TCACATAATATCAATGTAGCTTGTCAC 57.955 33.333 0.00 0.00 35.82 3.67
55 56 8.829612 CACATAATATCAATGTAGCTTGTCACA 58.170 33.333 0.00 0.00 35.82 3.58
56 57 9.394767 ACATAATATCAATGTAGCTTGTCACAA 57.605 29.630 0.00 0.00 35.82 3.33
62 63 7.928908 TCAATGTAGCTTGTCACAAAATTTC 57.071 32.000 0.00 0.00 0.00 2.17
63 64 7.487484 TCAATGTAGCTTGTCACAAAATTTCA 58.513 30.769 0.00 0.00 0.00 2.69
64 65 7.978414 TCAATGTAGCTTGTCACAAAATTTCAA 59.022 29.630 0.00 0.00 0.00 2.69
65 66 7.935338 ATGTAGCTTGTCACAAAATTTCAAG 57.065 32.000 10.65 10.65 38.60 3.02
66 67 6.862209 TGTAGCTTGTCACAAAATTTCAAGT 58.138 32.000 14.51 2.81 38.09 3.16
67 68 6.972328 TGTAGCTTGTCACAAAATTTCAAGTC 59.028 34.615 14.51 9.16 38.09 3.01
68 69 5.964758 AGCTTGTCACAAAATTTCAAGTCA 58.035 33.333 14.51 1.53 38.09 3.41
69 70 6.397272 AGCTTGTCACAAAATTTCAAGTCAA 58.603 32.000 14.51 7.65 38.09 3.18
70 71 6.873076 AGCTTGTCACAAAATTTCAAGTCAAA 59.127 30.769 14.51 0.00 38.09 2.69
71 72 7.063780 AGCTTGTCACAAAATTTCAAGTCAAAG 59.936 33.333 14.51 5.99 38.09 2.77
72 73 7.148590 GCTTGTCACAAAATTTCAAGTCAAAGT 60.149 33.333 14.51 0.00 38.09 2.66
73 74 8.600449 TTGTCACAAAATTTCAAGTCAAAGTT 57.400 26.923 0.00 0.00 0.00 2.66
74 75 8.238481 TGTCACAAAATTTCAAGTCAAAGTTC 57.762 30.769 0.00 0.00 0.00 3.01
75 76 7.061673 TGTCACAAAATTTCAAGTCAAAGTTCG 59.938 33.333 0.00 0.00 0.00 3.95
76 77 7.272515 GTCACAAAATTTCAAGTCAAAGTTCGA 59.727 33.333 0.00 0.00 0.00 3.71
77 78 7.810282 TCACAAAATTTCAAGTCAAAGTTCGAA 59.190 29.630 0.00 0.00 0.00 3.71
78 79 8.431593 CACAAAATTTCAAGTCAAAGTTCGAAA 58.568 29.630 0.00 0.00 0.00 3.46
79 80 8.432359 ACAAAATTTCAAGTCAAAGTTCGAAAC 58.568 29.630 0.00 0.00 0.00 2.78
80 81 8.431593 CAAAATTTCAAGTCAAAGTTCGAAACA 58.568 29.630 0.00 0.00 0.00 2.83
81 82 8.702163 AAATTTCAAGTCAAAGTTCGAAACAT 57.298 26.923 0.00 0.00 0.00 2.71
82 83 9.796120 AAATTTCAAGTCAAAGTTCGAAACATA 57.204 25.926 0.00 0.00 0.00 2.29
83 84 9.796120 AATTTCAAGTCAAAGTTCGAAACATAA 57.204 25.926 0.00 0.00 0.00 1.90
84 85 8.609478 TTTCAAGTCAAAGTTCGAAACATAAC 57.391 30.769 0.00 0.00 0.00 1.89
85 86 7.548196 TCAAGTCAAAGTTCGAAACATAACT 57.452 32.000 0.00 0.00 37.54 2.24
86 87 7.981142 TCAAGTCAAAGTTCGAAACATAACTT 58.019 30.769 0.00 5.12 45.44 2.66
87 88 7.908082 TCAAGTCAAAGTTCGAAACATAACTTG 59.092 33.333 24.03 24.03 43.35 3.16
88 89 7.548196 AGTCAAAGTTCGAAACATAACTTGA 57.452 32.000 0.00 0.00 43.35 3.02
89 90 7.981142 AGTCAAAGTTCGAAACATAACTTGAA 58.019 30.769 0.00 0.00 43.35 2.69
90 91 8.455682 AGTCAAAGTTCGAAACATAACTTGAAA 58.544 29.630 0.00 0.00 43.35 2.69
91 92 9.068008 GTCAAAGTTCGAAACATAACTTGAAAA 57.932 29.630 0.00 0.00 43.35 2.29
92 93 9.627395 TCAAAGTTCGAAACATAACTTGAAAAA 57.373 25.926 0.00 0.00 43.35 1.94
93 94 9.670180 CAAAGTTCGAAACATAACTTGAAAAAC 57.330 29.630 0.00 0.00 43.35 2.43
94 95 8.973835 AAGTTCGAAACATAACTTGAAAAACA 57.026 26.923 0.00 0.00 42.72 2.83
95 96 8.973835 AGTTCGAAACATAACTTGAAAAACAA 57.026 26.923 0.00 0.00 32.00 2.83
96 97 9.413048 AGTTCGAAACATAACTTGAAAAACAAA 57.587 25.926 0.00 0.00 38.08 2.83
109 110 9.838975 ACTTGAAAAACAAAAATGACAAATTCC 57.161 25.926 0.00 0.00 38.08 3.01
110 111 8.886816 TTGAAAAACAAAAATGACAAATTCCG 57.113 26.923 0.00 0.00 35.39 4.30
111 112 8.034058 TGAAAAACAAAAATGACAAATTCCGT 57.966 26.923 0.00 0.00 0.00 4.69
112 113 9.151471 TGAAAAACAAAAATGACAAATTCCGTA 57.849 25.926 0.00 0.00 0.00 4.02
113 114 9.416058 GAAAAACAAAAATGACAAATTCCGTAC 57.584 29.630 0.00 0.00 0.00 3.67
114 115 8.710835 AAAACAAAAATGACAAATTCCGTACT 57.289 26.923 0.00 0.00 0.00 2.73
115 116 7.692908 AACAAAAATGACAAATTCCGTACTG 57.307 32.000 0.00 0.00 0.00 2.74
116 117 7.033530 ACAAAAATGACAAATTCCGTACTGA 57.966 32.000 0.00 0.00 0.00 3.41
117 118 7.484975 ACAAAAATGACAAATTCCGTACTGAA 58.515 30.769 1.97 1.97 0.00 3.02
118 119 8.141268 ACAAAAATGACAAATTCCGTACTGAAT 58.859 29.630 6.69 6.69 36.53 2.57
119 120 9.619316 CAAAAATGACAAATTCCGTACTGAATA 57.381 29.630 12.26 0.00 33.91 1.75
120 121 9.840427 AAAAATGACAAATTCCGTACTGAATAG 57.160 29.630 12.26 10.61 33.91 1.73
121 122 8.561738 AAATGACAAATTCCGTACTGAATAGT 57.438 30.769 12.26 13.21 40.99 2.12
122 123 9.661563 AAATGACAAATTCCGTACTGAATAGTA 57.338 29.630 12.26 5.57 38.36 1.82
138 139 9.362539 ACTGAATAGTACGTAAACATAACTTGG 57.637 33.333 0.00 0.00 34.74 3.61
139 140 8.706492 TGAATAGTACGTAAACATAACTTGGG 57.294 34.615 0.00 0.00 0.00 4.12
140 141 7.278424 TGAATAGTACGTAAACATAACTTGGGC 59.722 37.037 0.00 0.00 0.00 5.36
141 142 5.156608 AGTACGTAAACATAACTTGGGCT 57.843 39.130 0.00 0.00 0.00 5.19
142 143 5.554070 AGTACGTAAACATAACTTGGGCTT 58.446 37.500 0.00 0.00 0.00 4.35
143 144 5.999600 AGTACGTAAACATAACTTGGGCTTT 59.000 36.000 0.00 0.00 0.00 3.51
144 145 7.160726 AGTACGTAAACATAACTTGGGCTTTA 58.839 34.615 0.00 0.00 0.00 1.85
145 146 6.490566 ACGTAAACATAACTTGGGCTTTAG 57.509 37.500 0.00 0.00 0.00 1.85
146 147 6.232692 ACGTAAACATAACTTGGGCTTTAGA 58.767 36.000 0.00 0.00 0.00 2.10
147 148 6.882678 ACGTAAACATAACTTGGGCTTTAGAT 59.117 34.615 0.00 0.00 0.00 1.98
148 149 7.392393 ACGTAAACATAACTTGGGCTTTAGATT 59.608 33.333 0.00 0.00 0.00 2.40
149 150 8.241367 CGTAAACATAACTTGGGCTTTAGATTT 58.759 33.333 0.00 0.00 0.00 2.17
150 151 9.353999 GTAAACATAACTTGGGCTTTAGATTTG 57.646 33.333 0.00 0.00 0.00 2.32
151 152 6.530019 ACATAACTTGGGCTTTAGATTTGG 57.470 37.500 0.00 0.00 0.00 3.28
152 153 3.961480 AACTTGGGCTTTAGATTTGGC 57.039 42.857 0.00 0.00 0.00 4.52
153 154 2.179427 ACTTGGGCTTTAGATTTGGCC 58.821 47.619 0.00 0.00 45.24 5.36
160 161 5.139435 GGCTTTAGATTTGGCCCATTATC 57.861 43.478 0.00 0.00 38.77 1.75
161 162 4.588528 GGCTTTAGATTTGGCCCATTATCA 59.411 41.667 0.00 0.00 38.77 2.15
162 163 5.509670 GGCTTTAGATTTGGCCCATTATCAC 60.510 44.000 0.00 0.00 38.77 3.06
163 164 5.068987 GCTTTAGATTTGGCCCATTATCACA 59.931 40.000 0.00 0.00 0.00 3.58
164 165 6.463995 TTTAGATTTGGCCCATTATCACAC 57.536 37.500 0.00 0.00 0.00 3.82
165 166 4.255510 AGATTTGGCCCATTATCACACT 57.744 40.909 0.00 0.00 0.00 3.55
166 167 3.956199 AGATTTGGCCCATTATCACACTG 59.044 43.478 0.00 0.00 0.00 3.66
167 168 3.448093 TTTGGCCCATTATCACACTGA 57.552 42.857 0.00 0.00 0.00 3.41
168 169 3.668141 TTGGCCCATTATCACACTGAT 57.332 42.857 0.00 0.00 40.72 2.90
169 170 2.934887 TGGCCCATTATCACACTGATG 58.065 47.619 0.00 0.00 37.70 3.07
170 171 2.241941 TGGCCCATTATCACACTGATGT 59.758 45.455 0.00 0.00 37.70 3.06
171 172 2.880890 GGCCCATTATCACACTGATGTC 59.119 50.000 0.00 0.00 37.70 3.06
172 173 3.544684 GCCCATTATCACACTGATGTCA 58.455 45.455 0.00 0.00 37.70 3.58
173 174 3.947196 GCCCATTATCACACTGATGTCAA 59.053 43.478 0.00 0.00 37.70 3.18
174 175 4.398988 GCCCATTATCACACTGATGTCAAA 59.601 41.667 0.00 0.00 37.70 2.69
175 176 5.068198 GCCCATTATCACACTGATGTCAAAT 59.932 40.000 0.00 0.00 37.70 2.32
176 177 6.406177 GCCCATTATCACACTGATGTCAAATT 60.406 38.462 0.00 0.00 37.70 1.82
177 178 7.549839 CCCATTATCACACTGATGTCAAATTT 58.450 34.615 0.00 0.00 37.70 1.82
178 179 7.490079 CCCATTATCACACTGATGTCAAATTTG 59.510 37.037 12.15 12.15 37.70 2.32
179 180 8.030692 CCATTATCACACTGATGTCAAATTTGT 58.969 33.333 17.47 0.00 37.70 2.83
180 181 9.069078 CATTATCACACTGATGTCAAATTTGTC 57.931 33.333 17.47 12.75 37.70 3.18
181 182 6.889301 ATCACACTGATGTCAAATTTGTCT 57.111 33.333 17.47 4.11 36.72 3.41
182 183 6.698008 TCACACTGATGTCAAATTTGTCTT 57.302 33.333 17.47 10.35 36.72 3.01
183 184 7.099266 TCACACTGATGTCAAATTTGTCTTT 57.901 32.000 17.47 4.88 36.72 2.52
184 185 7.546358 TCACACTGATGTCAAATTTGTCTTTT 58.454 30.769 17.47 2.60 36.72 2.27
185 186 8.034215 TCACACTGATGTCAAATTTGTCTTTTT 58.966 29.630 17.47 0.35 36.72 1.94
233 234 7.795431 TTTTCATATGAAATTTCGTGACAGC 57.205 32.000 27.11 0.00 42.83 4.40
234 235 6.493449 TTCATATGAAATTTCGTGACAGCA 57.507 33.333 20.83 2.34 0.00 4.41
235 236 6.682423 TCATATGAAATTTCGTGACAGCAT 57.318 33.333 20.83 6.57 0.00 3.79
236 237 7.784633 TCATATGAAATTTCGTGACAGCATA 57.215 32.000 20.83 8.39 0.00 3.14
237 238 7.630026 TCATATGAAATTTCGTGACAGCATAC 58.370 34.615 20.83 0.00 0.00 2.39
238 239 5.878332 ATGAAATTTCGTGACAGCATACA 57.122 34.783 12.13 0.00 0.00 2.29
239 240 5.878332 TGAAATTTCGTGACAGCATACAT 57.122 34.783 13.34 0.00 0.00 2.29
240 241 6.252967 TGAAATTTCGTGACAGCATACATT 57.747 33.333 13.34 0.00 0.00 2.71
241 242 6.085573 TGAAATTTCGTGACAGCATACATTG 58.914 36.000 13.34 0.00 0.00 2.82
242 243 5.878332 AATTTCGTGACAGCATACATTGA 57.122 34.783 0.00 0.00 0.00 2.57
243 244 6.441093 AATTTCGTGACAGCATACATTGAT 57.559 33.333 0.00 0.00 0.00 2.57
255 256 7.119360 CAGCATACATTGATGTTACACTAACG 58.881 38.462 1.46 0.00 41.97 3.18
256 257 6.816640 AGCATACATTGATGTTACACTAACGT 59.183 34.615 1.46 0.00 41.97 3.99
257 258 6.899771 GCATACATTGATGTTACACTAACGTG 59.100 38.462 1.46 0.00 43.06 4.49
258 259 5.277601 ACATTGATGTTACACTAACGTGC 57.722 39.130 0.00 0.00 40.48 5.34
259 260 4.994852 ACATTGATGTTACACTAACGTGCT 59.005 37.500 0.00 0.00 40.48 4.40
260 261 6.160684 ACATTGATGTTACACTAACGTGCTA 58.839 36.000 0.00 0.00 40.48 3.49
261 262 6.310467 ACATTGATGTTACACTAACGTGCTAG 59.690 38.462 0.00 0.00 40.48 3.42
262 263 5.632244 TGATGTTACACTAACGTGCTAGA 57.368 39.130 1.31 0.00 45.10 2.43
263 264 6.016213 TGATGTTACACTAACGTGCTAGAA 57.984 37.500 1.31 0.00 45.10 2.10
264 265 6.627243 TGATGTTACACTAACGTGCTAGAAT 58.373 36.000 1.31 0.00 45.10 2.40
265 266 7.094631 TGATGTTACACTAACGTGCTAGAATT 58.905 34.615 1.31 0.00 45.10 2.17
266 267 7.601130 TGATGTTACACTAACGTGCTAGAATTT 59.399 33.333 1.31 0.00 45.10 1.82
267 268 7.718272 TGTTACACTAACGTGCTAGAATTTT 57.282 32.000 1.31 0.00 45.10 1.82
268 269 8.145316 TGTTACACTAACGTGCTAGAATTTTT 57.855 30.769 1.31 0.00 45.10 1.94
320 321 1.105457 CCCCGTCGTCTACAATGGTA 58.895 55.000 0.00 0.00 0.00 3.25
339 340 1.362224 AGATATCCCCCAATCCCACG 58.638 55.000 0.00 0.00 0.00 4.94
374 383 1.781025 CTGCGCCGTGTTTCCTTGAA 61.781 55.000 4.18 0.00 0.00 2.69
402 411 1.005867 CACCGCAAAAAGCCATGCT 60.006 52.632 0.00 0.00 42.56 3.79
405 414 1.446618 CGCAAAAAGCCATGCTCCC 60.447 57.895 0.00 0.00 38.25 4.30
409 418 0.178894 AAAAAGCCATGCTCCCCCTT 60.179 50.000 0.00 0.00 38.25 3.95
417 426 3.412408 GCTCCCCCTTCACCTCCC 61.412 72.222 0.00 0.00 0.00 4.30
430 439 2.373707 CCTCCCCCTCTTCCTGCAG 61.374 68.421 6.78 6.78 0.00 4.41
436 445 1.517257 CCTCTTCCTGCAGCGTACG 60.517 63.158 11.84 11.84 0.00 3.67
439 448 1.080772 CTTCCTGCAGCGTACGTCA 60.081 57.895 17.90 11.38 0.00 4.35
510 519 1.170290 CGACCAAGCCGGGACTTTTT 61.170 55.000 2.18 0.00 40.22 1.94
555 564 4.903010 GGAGGCCGCGGCGATTAA 62.903 66.667 41.05 0.00 43.06 1.40
576 585 2.439104 GGAGGGAGCGAGCATCCTT 61.439 63.158 9.78 4.79 37.01 3.36
589 598 0.095935 CATCCTTGAGACAAAGCGCG 59.904 55.000 0.00 0.00 0.00 6.86
609 618 1.134818 GTCCAGATCCACATGTGCGTA 60.135 52.381 20.81 8.20 0.00 4.42
617 626 0.109272 CACATGTGCGTACGTCTCCT 60.109 55.000 17.90 1.00 0.00 3.69
632 641 2.559231 GTCTCCTCGGAAGTCAAGAACT 59.441 50.000 0.00 0.00 41.10 3.01
636 645 3.255149 TCCTCGGAAGTCAAGAACTGTAC 59.745 47.826 0.00 0.00 38.58 2.90
642 651 0.701303 GTCAAGAACTGTACGCGTCG 59.299 55.000 18.63 8.46 0.00 5.12
736 745 2.622436 ACAAAGCTGCTAGATTCGTCC 58.378 47.619 0.90 0.00 0.00 4.79
741 750 3.226777 AGCTGCTAGATTCGTCCTATGT 58.773 45.455 0.00 0.00 0.00 2.29
750 759 2.890808 TCGTCCTATGTGCCAGATTC 57.109 50.000 0.00 0.00 0.00 2.52
755 764 1.541233 CCTATGTGCCAGATTCGTCCC 60.541 57.143 0.00 0.00 0.00 4.46
779 788 0.530744 CAAGCAGGGCGTACTCTACA 59.469 55.000 0.00 0.00 0.00 2.74
780 789 0.818296 AAGCAGGGCGTACTCTACAG 59.182 55.000 0.00 0.00 0.00 2.74
783 799 0.747255 CAGGGCGTACTCTACAGCAT 59.253 55.000 0.00 0.00 32.54 3.79
786 806 1.341531 GGGCGTACTCTACAGCATCAT 59.658 52.381 0.00 0.00 32.54 2.45
814 834 4.793201 AGTTCTAATAATGGGGCCAGAAC 58.207 43.478 18.10 18.10 41.26 3.01
830 853 2.366266 CAGAACCATGCATATTTGGGGG 59.634 50.000 8.86 2.42 37.32 5.40
873 902 2.506472 GATCCGTGGAGAAGCCCC 59.494 66.667 0.00 0.00 34.97 5.80
874 903 2.285368 ATCCGTGGAGAAGCCCCA 60.285 61.111 0.00 0.00 34.97 4.96
878 907 3.090765 GTGGAGAAGCCCCACCAT 58.909 61.111 0.00 0.00 46.30 3.55
879 908 1.077429 GTGGAGAAGCCCCACCATC 60.077 63.158 0.00 0.00 46.30 3.51
880 909 1.229951 TGGAGAAGCCCCACCATCT 60.230 57.895 0.00 0.00 34.97 2.90
881 910 0.846427 TGGAGAAGCCCCACCATCTT 60.846 55.000 0.00 0.00 34.97 2.40
885 932 1.000396 AAGCCCCACCATCTTGCTC 60.000 57.895 0.00 0.00 0.00 4.26
896 943 1.880675 CATCTTGCTCAGGCCATCATC 59.119 52.381 5.01 0.00 37.74 2.92
897 944 0.913924 TCTTGCTCAGGCCATCATCA 59.086 50.000 5.01 0.00 37.74 3.07
904 951 2.272146 GGCCATCATCACCGGTGT 59.728 61.111 32.74 18.15 0.00 4.16
918 965 2.421739 GTGTCCACCTCTGCGTGT 59.578 61.111 0.00 0.00 31.47 4.49
926 984 0.032678 ACCTCTGCGTGTTCTCTGTG 59.967 55.000 0.00 0.00 0.00 3.66
979 1037 2.681097 GCTGAAGCTACAGGTTAAGGGG 60.681 54.545 7.48 0.00 35.15 4.79
984 1042 4.948062 AGCTACAGGTTAAGGGGAAAAT 57.052 40.909 0.00 0.00 0.00 1.82
986 1044 5.016831 AGCTACAGGTTAAGGGGAAAATTG 58.983 41.667 0.00 0.00 0.00 2.32
987 1045 4.381612 GCTACAGGTTAAGGGGAAAATTGC 60.382 45.833 0.00 0.00 0.00 3.56
992 1086 4.283467 AGGTTAAGGGGAAAATTGCTTGTC 59.717 41.667 0.00 0.00 0.00 3.18
1005 1099 1.908619 TGCTTGTCTCCTTCCATGCTA 59.091 47.619 0.00 0.00 34.05 3.49
1021 1115 1.875514 TGCTACTCACAAGCAAGCAAG 59.124 47.619 0.00 0.00 46.57 4.01
1024 1118 1.105457 ACTCACAAGCAAGCAAGCAA 58.895 45.000 3.19 0.00 36.85 3.91
1025 1119 1.066605 ACTCACAAGCAAGCAAGCAAG 59.933 47.619 3.19 0.00 36.85 4.01
1027 1121 0.528901 CACAAGCAAGCAAGCAAGCA 60.529 50.000 10.52 0.00 36.85 3.91
1028 1122 0.176219 ACAAGCAAGCAAGCAAGCAA 59.824 45.000 10.52 0.00 36.85 3.91
1029 1123 0.859232 CAAGCAAGCAAGCAAGCAAG 59.141 50.000 10.52 0.00 36.85 4.01
1030 1124 0.878961 AAGCAAGCAAGCAAGCAAGC 60.879 50.000 10.52 6.16 36.99 4.01
1031 1125 1.593209 GCAAGCAAGCAAGCAAGCA 60.593 52.632 10.52 0.00 36.81 3.91
1033 1127 0.528901 CAAGCAAGCAAGCAAGCACA 60.529 50.000 10.52 0.00 36.85 4.57
1034 1128 0.391597 AAGCAAGCAAGCAAGCACAT 59.608 45.000 10.52 0.00 36.85 3.21
1035 1129 0.391597 AGCAAGCAAGCAAGCACATT 59.608 45.000 10.52 0.00 36.85 2.71
1036 1130 1.202604 AGCAAGCAAGCAAGCACATTT 60.203 42.857 10.52 0.00 36.85 2.32
1037 1131 1.193874 GCAAGCAAGCAAGCACATTTC 59.806 47.619 3.19 0.00 36.85 2.17
1038 1132 2.750948 CAAGCAAGCAAGCACATTTCT 58.249 42.857 3.19 0.00 36.85 2.52
1039 1133 2.433868 AGCAAGCAAGCACATTTCTG 57.566 45.000 3.19 0.00 36.85 3.02
1040 1134 0.788391 GCAAGCAAGCACATTTCTGC 59.212 50.000 0.00 0.00 37.44 4.26
1047 1141 1.242076 AGCACATTTCTGCTCACACC 58.758 50.000 0.00 0.00 44.58 4.16
1048 1142 0.953727 GCACATTTCTGCTCACACCA 59.046 50.000 0.00 0.00 34.06 4.17
1049 1143 1.335324 GCACATTTCTGCTCACACCAC 60.335 52.381 0.00 0.00 34.06 4.16
1050 1144 1.948834 CACATTTCTGCTCACACCACA 59.051 47.619 0.00 0.00 0.00 4.17
1051 1145 2.031420 CACATTTCTGCTCACACCACAG 60.031 50.000 0.00 0.00 0.00 3.66
1052 1146 2.158769 ACATTTCTGCTCACACCACAGA 60.159 45.455 0.00 0.00 38.62 3.41
1053 1147 1.953559 TTTCTGCTCACACCACAGAC 58.046 50.000 0.00 0.00 40.03 3.51
1076 1170 2.224621 ACACCATTGTTGTCCTCTCCAG 60.225 50.000 0.00 0.00 28.43 3.86
1081 1175 1.131638 TGTTGTCCTCTCCAGCTTGT 58.868 50.000 0.00 0.00 0.00 3.16
1095 1189 0.040958 GCTTGTGCTTCTCCGTGTTG 60.041 55.000 0.00 0.00 36.03 3.33
1098 1192 2.605837 TGTGCTTCTCCGTGTTGTTA 57.394 45.000 0.00 0.00 0.00 2.41
1099 1193 2.206750 TGTGCTTCTCCGTGTTGTTAC 58.793 47.619 0.00 0.00 0.00 2.50
1100 1194 1.191647 GTGCTTCTCCGTGTTGTTACG 59.808 52.381 0.00 0.00 43.35 3.18
1101 1195 0.163146 GCTTCTCCGTGTTGTTACGC 59.837 55.000 0.00 0.00 42.44 4.42
1102 1196 0.788391 CTTCTCCGTGTTGTTACGCC 59.212 55.000 0.00 0.00 42.44 5.68
1120 1214 3.361977 GTGTTCCAATGGCGGCGT 61.362 61.111 9.37 0.00 0.00 5.68
1134 1228 2.358247 GCGTCGGTGGTGGTCAAT 60.358 61.111 0.00 0.00 0.00 2.57
1135 1229 2.677003 GCGTCGGTGGTGGTCAATG 61.677 63.158 0.00 0.00 0.00 2.82
1140 1234 0.882927 CGGTGGTGGTCAATGTCGTT 60.883 55.000 0.00 0.00 0.00 3.85
1144 1238 0.872388 GGTGGTCAATGTCGTTGTCC 59.128 55.000 12.58 12.58 43.62 4.02
1159 1253 3.578150 GTTGTCCAACCACTGGTCACAG 61.578 54.545 0.00 0.00 46.51 3.66
1236 1330 0.395724 TGGAGGAGCAGCACGAGATA 60.396 55.000 0.00 0.00 0.00 1.98
1246 1340 1.483424 GCACGAGATACTCAAGCGCC 61.483 60.000 2.29 0.00 0.00 6.53
1275 1369 1.439228 CATCCTGGACGTCATCGCT 59.561 57.895 18.91 0.00 41.18 4.93
1431 1546 0.324943 GGCACTACAAGGAGCTTGGA 59.675 55.000 0.00 0.00 44.81 3.53
1527 1642 3.357079 GTGCGGGCTGTTGAGGTG 61.357 66.667 0.00 0.00 0.00 4.00
1575 1690 5.594725 TGGCTTTAAGTATCAACAACAACCA 59.405 36.000 0.00 0.00 0.00 3.67
1576 1691 5.918576 GGCTTTAAGTATCAACAACAACCAC 59.081 40.000 0.00 0.00 0.00 4.16
1577 1692 5.918576 GCTTTAAGTATCAACAACAACCACC 59.081 40.000 0.00 0.00 0.00 4.61
1618 1733 4.180057 GCGACAGAAGGATCATGATATCC 58.820 47.826 8.54 7.78 45.06 2.59
1761 1885 0.035739 TGGGAAAGACCACGTTAGCC 59.964 55.000 0.00 0.00 41.20 3.93
1817 1941 2.965572 TTCAATTTGCTGCTATGGGC 57.034 45.000 0.00 0.00 42.22 5.36
1890 2014 3.641046 AGCAGCTCCTGAGAAGAATAGA 58.359 45.455 0.00 0.00 32.44 1.98
1898 2124 5.268387 TCCTGAGAAGAATAGAGCAGAAGT 58.732 41.667 0.00 0.00 0.00 3.01
1909 2258 0.108424 AGCAGAAGTAGCAGCTTCCG 60.108 55.000 0.00 7.60 44.27 4.30
1910 2259 0.390472 GCAGAAGTAGCAGCTTCCGT 60.390 55.000 0.00 0.00 44.27 4.69
1932 2281 4.508124 GTCATGAAAACACCGCTAGATAGG 59.492 45.833 0.00 0.00 0.00 2.57
1947 2296 5.245075 GCTAGATAGGCTTCAGGATGTAGTT 59.755 44.000 0.00 0.00 35.75 2.24
2315 2668 3.181443 ACCACCGAAGAAGAATGGAAAGT 60.181 43.478 0.00 0.00 34.38 2.66
2319 2672 4.887655 ACCGAAGAAGAATGGAAAGTTGTT 59.112 37.500 0.00 0.00 0.00 2.83
2361 2714 3.276857 CACCATGGAGTCTGGAATCTTG 58.723 50.000 21.47 0.00 37.22 3.02
2746 3145 4.787563 GCAAGATTGGATATGTTGTCGCAG 60.788 45.833 0.00 0.00 0.00 5.18
2833 3268 6.596309 AGGAACCAGGAAGAAAATTGAATC 57.404 37.500 0.00 0.00 0.00 2.52
3399 3900 3.433306 AAATGGACTGTTGGATCGGAA 57.567 42.857 0.00 0.00 0.00 4.30
3621 4149 8.770438 TTAATACATCCTTTGCATTTCCAAAC 57.230 30.769 0.00 0.00 31.85 2.93
3829 4369 5.719085 AGATGTCCAGAGTTGACAACTAGAT 59.281 40.000 20.61 9.22 45.15 1.98
3951 4497 3.181490 TGCATAGCCTTGTAGACAGTACG 60.181 47.826 0.00 0.00 0.00 3.67
4066 4621 4.586841 TGGTGCTACAAAACTTTAAGCCAT 59.413 37.500 0.00 0.00 31.15 4.40
4073 4634 9.503427 GCTACAAAACTTTAAGCCATGTATAAG 57.497 33.333 0.00 0.00 0.00 1.73
4094 4655 3.004106 AGAGAGCTGTGTTCATGTTTTGC 59.996 43.478 0.00 0.00 0.00 3.68
4347 4911 4.631773 CCTGCATCACTCAGGGTG 57.368 61.111 0.00 0.00 45.62 4.61
4474 5038 6.013293 AGAGGTGTCATCATCATCATCATCAT 60.013 38.462 0.00 0.00 0.00 2.45
4483 5047 7.849804 TCATCATCATCATCATCATCATCAC 57.150 36.000 0.00 0.00 0.00 3.06
4484 5048 6.823689 TCATCATCATCATCATCATCATCACC 59.176 38.462 0.00 0.00 0.00 4.02
4485 5049 6.121776 TCATCATCATCATCATCATCACCA 57.878 37.500 0.00 0.00 0.00 4.17
4486 5050 6.721318 TCATCATCATCATCATCATCACCAT 58.279 36.000 0.00 0.00 0.00 3.55
4487 5051 6.823689 TCATCATCATCATCATCATCACCATC 59.176 38.462 0.00 0.00 0.00 3.51
4488 5052 6.121776 TCATCATCATCATCATCACCATCA 57.878 37.500 0.00 0.00 0.00 3.07
4489 5053 6.721318 TCATCATCATCATCATCACCATCAT 58.279 36.000 0.00 0.00 0.00 2.45
4490 5054 6.823689 TCATCATCATCATCATCACCATCATC 59.176 38.462 0.00 0.00 0.00 2.92
4491 5055 6.121776 TCATCATCATCATCACCATCATCA 57.878 37.500 0.00 0.00 0.00 3.07
4572 5136 1.314867 GGTCCTCCATCTCCCCTCA 59.685 63.158 0.00 0.00 0.00 3.86
4892 5474 5.355350 GTGAGCTAATTGTGCTAGTTGGATT 59.645 40.000 7.59 0.00 41.30 3.01
4934 5524 7.295952 AGTAGTATGACAGAAAAATGAAGCG 57.704 36.000 0.00 0.00 0.00 4.68
4953 5543 9.612620 ATGAAGCGAAGTAAATGTTCTTTAAAG 57.387 29.630 9.04 9.04 0.00 1.85
5045 5640 2.140098 AGCCAAGGCCTATCCCTATT 57.860 50.000 5.16 0.00 43.17 1.73
5273 5871 1.000283 CACAGAGACTGGAAAGCGAGT 60.000 52.381 0.00 0.00 35.51 4.18
5321 5919 0.657840 AGACGCACACAAGAAGTTGC 59.342 50.000 0.00 0.00 37.14 4.17
5407 6021 9.415544 CCCAGAAAAAGATCTTGTTTGAATAAG 57.584 33.333 12.23 0.00 0.00 1.73
5579 6197 6.852420 AACAGAGTACTGCCATTTAGAGTA 57.148 37.500 0.00 0.00 46.95 2.59
5588 6206 7.195374 ACTGCCATTTAGAGTAAGTATTCCA 57.805 36.000 0.00 0.00 0.00 3.53
5593 6211 9.646427 GCCATTTAGAGTAAGTATTCCATCTAG 57.354 37.037 0.00 0.00 0.00 2.43
5608 6228 4.098501 TCCATCTAGTGCATATATCGGCAG 59.901 45.833 1.74 0.00 41.35 4.85
5609 6229 4.366586 CATCTAGTGCATATATCGGCAGG 58.633 47.826 1.74 0.00 41.35 4.85
5610 6230 3.431415 TCTAGTGCATATATCGGCAGGT 58.569 45.455 1.74 0.00 41.35 4.00
5611 6231 2.462456 AGTGCATATATCGGCAGGTG 57.538 50.000 1.74 0.00 41.35 4.00
5613 6233 2.104792 AGTGCATATATCGGCAGGTGTT 59.895 45.455 1.74 0.00 41.35 3.32
5641 6271 3.318839 TGAAGCTGTTGATTTCCCTTGTG 59.681 43.478 0.00 0.00 0.00 3.33
5644 6274 2.036346 GCTGTTGATTTCCCTTGTGCTT 59.964 45.455 0.00 0.00 0.00 3.91
5674 6308 6.446434 CCAGATCTTATGAAGGGGATTATCCT 59.554 42.308 11.40 0.00 36.57 3.24
5680 6314 9.635284 TCTTATGAAGGGGATTATCCTAGATTT 57.365 33.333 11.40 0.00 36.57 2.17
5685 6319 6.474918 AGGGGATTATCCTAGATTTTGCAT 57.525 37.500 11.40 0.00 36.57 3.96
5688 6322 7.462328 AGGGGATTATCCTAGATTTTGCATAGA 59.538 37.037 11.40 0.00 36.57 1.98
5696 6330 8.712228 TCCTAGATTTTGCATAGAGACATAGA 57.288 34.615 0.00 0.00 0.00 1.98
5713 6347 8.749026 AGACATAGATGCTGATTTTGAAGATT 57.251 30.769 0.00 0.00 0.00 2.40
5714 6348 9.842775 AGACATAGATGCTGATTTTGAAGATTA 57.157 29.630 0.00 0.00 0.00 1.75
5716 6350 8.566260 ACATAGATGCTGATTTTGAAGATTAGC 58.434 33.333 5.66 5.66 36.85 3.09
5717 6351 8.565416 CATAGATGCTGATTTTGAAGATTAGCA 58.435 33.333 15.57 15.57 45.99 3.49
5718 6352 7.400599 AGATGCTGATTTTGAAGATTAGCAA 57.599 32.000 16.82 3.94 45.37 3.91
5719 6353 7.256286 AGATGCTGATTTTGAAGATTAGCAAC 58.744 34.615 16.82 14.49 45.37 4.17
5770 6421 1.603678 GCTGCAATGGTGTGGAAACAG 60.604 52.381 0.00 0.00 44.46 3.16
5773 6424 1.956477 GCAATGGTGTGGAAACAGAGT 59.044 47.619 0.00 0.00 44.46 3.24
5778 6429 3.750371 TGGTGTGGAAACAGAGTAATGG 58.250 45.455 0.00 0.00 44.46 3.16
5784 6435 5.048083 TGTGGAAACAGAGTAATGGCATTTC 60.048 40.000 19.21 13.50 44.46 2.17
5852 6504 3.073798 TCTGGAAGCCTCAATGTTAACCA 59.926 43.478 2.48 0.00 0.00 3.67
5869 6521 3.639099 CAGCTGCTGGGAAGAAAGA 57.361 52.632 21.71 0.00 0.00 2.52
5871 6523 1.538950 CAGCTGCTGGGAAGAAAGAAC 59.461 52.381 21.71 0.00 0.00 3.01
5872 6524 1.423161 AGCTGCTGGGAAGAAAGAACT 59.577 47.619 0.00 0.00 0.00 3.01
5874 6526 2.030451 GCTGCTGGGAAGAAAGAACTTG 60.030 50.000 0.00 0.00 0.00 3.16
5875 6527 1.956477 TGCTGGGAAGAAAGAACTTGC 59.044 47.619 0.00 0.00 37.47 4.01
5876 6528 1.068954 GCTGGGAAGAAAGAACTTGCG 60.069 52.381 0.00 0.00 38.72 4.85
5877 6529 0.951558 TGGGAAGAAAGAACTTGCGC 59.048 50.000 0.00 0.00 38.72 6.09
5878 6530 0.241213 GGGAAGAAAGAACTTGCGCC 59.759 55.000 4.18 0.00 38.72 6.53
5879 6531 0.951558 GGAAGAAAGAACTTGCGCCA 59.048 50.000 4.18 0.00 0.00 5.69
5880 6532 1.335051 GGAAGAAAGAACTTGCGCCAC 60.335 52.381 4.18 0.00 0.00 5.01
5881 6533 1.333619 GAAGAAAGAACTTGCGCCACA 59.666 47.619 4.18 0.00 0.00 4.17
5882 6534 0.947244 AGAAAGAACTTGCGCCACAG 59.053 50.000 4.18 0.00 0.00 3.66
5883 6535 0.944386 GAAAGAACTTGCGCCACAGA 59.056 50.000 4.18 0.00 0.00 3.41
5884 6536 0.663153 AAAGAACTTGCGCCACAGAC 59.337 50.000 4.18 0.00 0.00 3.51
5885 6537 1.166531 AAGAACTTGCGCCACAGACC 61.167 55.000 4.18 0.00 0.00 3.85
5886 6538 2.594592 AACTTGCGCCACAGACCC 60.595 61.111 4.18 0.00 0.00 4.46
5887 6539 3.120086 AACTTGCGCCACAGACCCT 62.120 57.895 4.18 0.00 0.00 4.34
5888 6540 3.052082 CTTGCGCCACAGACCCTG 61.052 66.667 4.18 0.00 37.52 4.45
5889 6541 3.832237 CTTGCGCCACAGACCCTGT 62.832 63.158 4.18 0.00 46.51 4.00
5890 6542 3.825160 TTGCGCCACAGACCCTGTC 62.825 63.158 4.18 0.00 43.43 3.51
5894 6546 4.742201 CCACAGACCCTGTCGCGG 62.742 72.222 6.13 0.00 43.43 6.46
5895 6547 3.991051 CACAGACCCTGTCGCGGT 61.991 66.667 6.13 0.00 43.43 5.68
5896 6548 3.991051 ACAGACCCTGTCGCGGTG 61.991 66.667 6.13 0.00 41.21 4.94
5897 6549 4.742201 CAGACCCTGTCGCGGTGG 62.742 72.222 6.13 6.10 37.67 4.61
5899 6551 4.736896 GACCCTGTCGCGGTGGTC 62.737 72.222 17.05 17.05 40.40 4.02
5901 6553 4.742201 CCCTGTCGCGGTGGTCAG 62.742 72.222 6.13 7.63 0.00 3.51
5902 6554 4.742201 CCTGTCGCGGTGGTCAGG 62.742 72.222 6.13 12.76 40.83 3.86
5909 6561 4.320456 CGGTGGTCAGGCAGCTGT 62.320 66.667 16.64 0.00 0.00 4.40
5910 6562 2.113986 GGTGGTCAGGCAGCTGTT 59.886 61.111 16.64 0.77 0.00 3.16
5911 6563 2.263741 GGTGGTCAGGCAGCTGTTG 61.264 63.158 16.64 14.19 0.00 3.33
5912 6564 1.227943 GTGGTCAGGCAGCTGTTGA 60.228 57.895 16.64 16.28 0.00 3.18
5913 6565 0.819259 GTGGTCAGGCAGCTGTTGAA 60.819 55.000 19.99 7.39 0.00 2.69
5914 6566 0.535780 TGGTCAGGCAGCTGTTGAAG 60.536 55.000 19.99 6.15 0.00 3.02
5915 6567 0.250467 GGTCAGGCAGCTGTTGAAGA 60.250 55.000 19.99 8.11 0.00 2.87
5916 6568 0.871057 GTCAGGCAGCTGTTGAAGAC 59.129 55.000 19.99 14.73 0.00 3.01
5936 6588 6.672266 AGACTGTTCACTGAAGAATTAGGA 57.328 37.500 0.00 0.00 0.00 2.94
5938 6590 8.367660 AGACTGTTCACTGAAGAATTAGGATA 57.632 34.615 0.00 0.00 0.00 2.59
5958 6610 7.617041 GGATACTCTGTTATTTTCTGCAGTT 57.383 36.000 14.67 0.09 0.00 3.16
5959 6611 8.045176 GGATACTCTGTTATTTTCTGCAGTTT 57.955 34.615 14.67 0.00 0.00 2.66
5960 6612 8.178313 GGATACTCTGTTATTTTCTGCAGTTTC 58.822 37.037 14.67 0.00 0.00 2.78
5961 6613 8.854614 ATACTCTGTTATTTTCTGCAGTTTCT 57.145 30.769 14.67 0.27 0.00 2.52
5962 6614 6.963796 ACTCTGTTATTTTCTGCAGTTTCTG 58.036 36.000 14.67 3.62 34.12 3.02
5963 6615 6.767902 ACTCTGTTATTTTCTGCAGTTTCTGA 59.232 34.615 14.67 7.23 32.44 3.27
5964 6616 7.446625 ACTCTGTTATTTTCTGCAGTTTCTGAT 59.553 33.333 14.67 3.67 32.44 2.90
5984 6636 4.036734 TGATGTTTCTTGCAGTGTTTCCTC 59.963 41.667 0.00 0.00 0.00 3.71
6023 6675 5.886474 CGATATGTATCTACCTGGAGCCTTA 59.114 44.000 0.00 0.00 0.00 2.69
6027 6679 5.655394 TGTATCTACCTGGAGCCTTATGAT 58.345 41.667 0.00 0.00 0.00 2.45
6041 6693 5.072329 AGCCTTATGATGCCTGTTACTATGT 59.928 40.000 0.00 0.00 0.00 2.29
6045 6697 7.041780 CCTTATGATGCCTGTTACTATGTGTTC 60.042 40.741 0.00 0.00 0.00 3.18
6047 6699 2.967362 TGCCTGTTACTATGTGTTCCG 58.033 47.619 0.00 0.00 0.00 4.30
6050 6702 3.749609 GCCTGTTACTATGTGTTCCGTTT 59.250 43.478 0.00 0.00 0.00 3.60
6062 6714 7.784633 ATGTGTTCCGTTTTCAATGAAAATT 57.215 28.000 21.97 0.10 42.31 1.82
6064 6716 6.036517 TGTGTTCCGTTTTCAATGAAAATTGG 59.963 34.615 24.50 24.50 42.31 3.16
6065 6717 6.256757 GTGTTCCGTTTTCAATGAAAATTGGA 59.743 34.615 26.95 26.95 42.31 3.53
6071 6723 2.883026 TCAATGAAAATTGGACGGGGT 58.117 42.857 0.00 0.00 32.65 4.95
6072 6724 2.560542 TCAATGAAAATTGGACGGGGTG 59.439 45.455 0.00 0.00 32.65 4.61
6073 6725 2.298729 CAATGAAAATTGGACGGGGTGT 59.701 45.455 0.00 0.00 0.00 4.16
6074 6726 1.323412 TGAAAATTGGACGGGGTGTG 58.677 50.000 0.00 0.00 0.00 3.82
6075 6727 0.038618 GAAAATTGGACGGGGTGTGC 60.039 55.000 0.00 0.00 39.78 4.57
6076 6728 1.801309 AAAATTGGACGGGGTGTGCG 61.801 55.000 0.00 0.00 42.78 5.34
6082 6734 4.887190 ACGGGGTGTGCGCCTTTT 62.887 61.111 4.18 0.00 44.64 2.27
6083 6735 4.341502 CGGGGTGTGCGCCTTTTG 62.342 66.667 4.18 0.00 44.64 2.44
6084 6736 2.909965 GGGGTGTGCGCCTTTTGA 60.910 61.111 4.18 0.00 43.60 2.69
6085 6737 2.275380 GGGGTGTGCGCCTTTTGAT 61.275 57.895 4.18 0.00 43.60 2.57
6086 6738 1.212751 GGGTGTGCGCCTTTTGATC 59.787 57.895 4.18 0.00 0.00 2.92
6087 6739 1.154225 GGTGTGCGCCTTTTGATCG 60.154 57.895 4.18 0.00 0.00 3.69
6088 6740 1.154225 GTGTGCGCCTTTTGATCGG 60.154 57.895 4.18 0.00 0.00 4.18
6089 6741 1.599518 TGTGCGCCTTTTGATCGGT 60.600 52.632 4.18 0.00 0.00 4.69
6090 6742 1.169661 TGTGCGCCTTTTGATCGGTT 61.170 50.000 4.18 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.565090 ACATTGATATTATGTGAGTGTGCTAAT 57.435 29.630 4.22 0.00 35.03 1.73
19 20 8.962884 ACATTGATATTATGTGAGTGTGCTAA 57.037 30.769 4.22 0.00 35.03 3.09
20 21 9.696917 CTACATTGATATTATGTGAGTGTGCTA 57.303 33.333 12.28 0.00 36.89 3.49
21 22 7.172190 GCTACATTGATATTATGTGAGTGTGCT 59.828 37.037 12.28 0.00 36.89 4.40
22 23 7.172190 AGCTACATTGATATTATGTGAGTGTGC 59.828 37.037 12.28 8.13 36.89 4.57
23 24 8.599055 AGCTACATTGATATTATGTGAGTGTG 57.401 34.615 12.28 0.00 36.89 3.82
24 25 9.049523 CAAGCTACATTGATATTATGTGAGTGT 57.950 33.333 12.28 0.00 36.89 3.55
25 26 9.049523 ACAAGCTACATTGATATTATGTGAGTG 57.950 33.333 12.28 8.60 36.89 3.51
26 27 9.265901 GACAAGCTACATTGATATTATGTGAGT 57.734 33.333 12.28 5.88 36.89 3.41
27 28 9.264719 TGACAAGCTACATTGATATTATGTGAG 57.735 33.333 12.28 8.27 36.89 3.51
28 29 9.045223 GTGACAAGCTACATTGATATTATGTGA 57.955 33.333 12.28 0.82 36.89 3.58
29 30 8.829612 TGTGACAAGCTACATTGATATTATGTG 58.170 33.333 12.28 6.11 36.89 3.21
30 31 8.962884 TGTGACAAGCTACATTGATATTATGT 57.037 30.769 8.79 8.79 39.44 2.29
36 37 9.624697 GAAATTTTGTGACAAGCTACATTGATA 57.375 29.630 0.00 0.00 34.20 2.15
37 38 8.143193 TGAAATTTTGTGACAAGCTACATTGAT 58.857 29.630 0.00 0.00 34.20 2.57
38 39 7.487484 TGAAATTTTGTGACAAGCTACATTGA 58.513 30.769 0.00 0.00 34.20 2.57
39 40 7.697352 TGAAATTTTGTGACAAGCTACATTG 57.303 32.000 0.00 0.00 36.22 2.82
40 41 7.981225 ACTTGAAATTTTGTGACAAGCTACATT 59.019 29.630 13.60 0.00 40.72 2.71
41 42 7.491682 ACTTGAAATTTTGTGACAAGCTACAT 58.508 30.769 13.60 0.00 40.72 2.29
42 43 6.862209 ACTTGAAATTTTGTGACAAGCTACA 58.138 32.000 13.60 0.00 40.72 2.74
43 44 6.972328 TGACTTGAAATTTTGTGACAAGCTAC 59.028 34.615 13.60 8.29 40.72 3.58
44 45 7.094508 TGACTTGAAATTTTGTGACAAGCTA 57.905 32.000 13.60 4.00 40.72 3.32
45 46 5.964758 TGACTTGAAATTTTGTGACAAGCT 58.035 33.333 13.60 4.78 40.72 3.74
46 47 6.645700 TTGACTTGAAATTTTGTGACAAGC 57.354 33.333 13.60 8.95 40.72 4.01
47 48 8.243289 ACTTTGACTTGAAATTTTGTGACAAG 57.757 30.769 12.57 12.57 42.11 3.16
48 49 8.600449 AACTTTGACTTGAAATTTTGTGACAA 57.400 26.923 0.00 0.00 0.00 3.18
49 50 7.061673 CGAACTTTGACTTGAAATTTTGTGACA 59.938 33.333 0.00 0.00 0.00 3.58
50 51 7.272515 TCGAACTTTGACTTGAAATTTTGTGAC 59.727 33.333 0.00 0.00 0.00 3.67
51 52 7.309177 TCGAACTTTGACTTGAAATTTTGTGA 58.691 30.769 0.00 0.00 0.00 3.58
52 53 7.504922 TCGAACTTTGACTTGAAATTTTGTG 57.495 32.000 0.00 0.00 0.00 3.33
53 54 8.432359 GTTTCGAACTTTGACTTGAAATTTTGT 58.568 29.630 0.00 0.00 0.00 2.83
54 55 8.431593 TGTTTCGAACTTTGACTTGAAATTTTG 58.568 29.630 0.00 0.00 0.00 2.44
55 56 8.527567 TGTTTCGAACTTTGACTTGAAATTTT 57.472 26.923 0.00 0.00 0.00 1.82
56 57 8.702163 ATGTTTCGAACTTTGACTTGAAATTT 57.298 26.923 0.00 0.00 0.00 1.82
57 58 9.796120 TTATGTTTCGAACTTTGACTTGAAATT 57.204 25.926 0.00 0.00 0.00 1.82
58 59 9.233232 GTTATGTTTCGAACTTTGACTTGAAAT 57.767 29.630 0.00 0.00 0.00 2.17
59 60 8.455682 AGTTATGTTTCGAACTTTGACTTGAAA 58.544 29.630 0.00 0.00 31.83 2.69
60 61 7.981142 AGTTATGTTTCGAACTTTGACTTGAA 58.019 30.769 0.00 0.00 31.83 2.69
61 62 7.548196 AGTTATGTTTCGAACTTTGACTTGA 57.452 32.000 0.00 0.00 31.83 3.02
62 63 7.908082 TCAAGTTATGTTTCGAACTTTGACTTG 59.092 33.333 23.41 23.41 41.93 3.16
63 64 7.981142 TCAAGTTATGTTTCGAACTTTGACTT 58.019 30.769 0.00 3.58 41.93 3.01
64 65 7.548196 TCAAGTTATGTTTCGAACTTTGACT 57.452 32.000 0.00 0.00 41.93 3.41
65 66 8.609478 TTTCAAGTTATGTTTCGAACTTTGAC 57.391 30.769 0.00 0.00 41.93 3.18
66 67 9.627395 TTTTTCAAGTTATGTTTCGAACTTTGA 57.373 25.926 0.00 0.00 41.93 2.69
67 68 9.670180 GTTTTTCAAGTTATGTTTCGAACTTTG 57.330 29.630 0.00 0.00 41.93 2.77
68 69 9.413048 TGTTTTTCAAGTTATGTTTCGAACTTT 57.587 25.926 0.00 0.00 41.93 2.66
69 70 8.973835 TGTTTTTCAAGTTATGTTTCGAACTT 57.026 26.923 0.00 0.00 44.71 2.66
70 71 8.973835 TTGTTTTTCAAGTTATGTTTCGAACT 57.026 26.923 0.00 0.00 37.50 3.01
83 84 9.838975 GGAATTTGTCATTTTTGTTTTTCAAGT 57.161 25.926 0.00 0.00 37.35 3.16
84 85 8.997960 CGGAATTTGTCATTTTTGTTTTTCAAG 58.002 29.630 0.00 0.00 37.35 3.02
85 86 8.507249 ACGGAATTTGTCATTTTTGTTTTTCAA 58.493 25.926 0.00 0.00 0.00 2.69
86 87 8.034058 ACGGAATTTGTCATTTTTGTTTTTCA 57.966 26.923 0.00 0.00 0.00 2.69
87 88 9.416058 GTACGGAATTTGTCATTTTTGTTTTTC 57.584 29.630 0.00 0.00 0.00 2.29
88 89 9.157104 AGTACGGAATTTGTCATTTTTGTTTTT 57.843 25.926 0.00 0.00 0.00 1.94
89 90 8.599774 CAGTACGGAATTTGTCATTTTTGTTTT 58.400 29.630 0.00 0.00 0.00 2.43
90 91 7.976734 TCAGTACGGAATTTGTCATTTTTGTTT 59.023 29.630 0.00 0.00 0.00 2.83
91 92 7.484975 TCAGTACGGAATTTGTCATTTTTGTT 58.515 30.769 0.00 0.00 0.00 2.83
92 93 7.033530 TCAGTACGGAATTTGTCATTTTTGT 57.966 32.000 0.00 0.00 0.00 2.83
93 94 7.922505 TTCAGTACGGAATTTGTCATTTTTG 57.077 32.000 4.18 0.00 0.00 2.44
94 95 9.840427 CTATTCAGTACGGAATTTGTCATTTTT 57.160 29.630 23.35 1.68 38.41 1.94
95 96 9.010029 ACTATTCAGTACGGAATTTGTCATTTT 57.990 29.630 23.35 2.15 38.41 1.82
96 97 8.561738 ACTATTCAGTACGGAATTTGTCATTT 57.438 30.769 23.35 2.81 38.41 2.32
97 98 9.095065 GTACTATTCAGTACGGAATTTGTCATT 57.905 33.333 23.35 5.36 45.71 2.57
98 99 8.644318 GTACTATTCAGTACGGAATTTGTCAT 57.356 34.615 23.35 4.13 45.71 3.06
112 113 9.362539 CCAAGTTATGTTTACGTACTATTCAGT 57.637 33.333 0.00 0.00 38.91 3.41
113 114 8.814235 CCCAAGTTATGTTTACGTACTATTCAG 58.186 37.037 0.00 0.00 0.00 3.02
114 115 7.278424 GCCCAAGTTATGTTTACGTACTATTCA 59.722 37.037 0.00 0.00 0.00 2.57
115 116 7.493645 AGCCCAAGTTATGTTTACGTACTATTC 59.506 37.037 0.00 0.00 0.00 1.75
116 117 7.333323 AGCCCAAGTTATGTTTACGTACTATT 58.667 34.615 0.00 0.00 0.00 1.73
117 118 6.881570 AGCCCAAGTTATGTTTACGTACTAT 58.118 36.000 0.00 0.00 0.00 2.12
118 119 6.284891 AGCCCAAGTTATGTTTACGTACTA 57.715 37.500 0.00 0.00 0.00 1.82
119 120 5.156608 AGCCCAAGTTATGTTTACGTACT 57.843 39.130 0.00 0.00 0.00 2.73
120 121 5.868043 AAGCCCAAGTTATGTTTACGTAC 57.132 39.130 0.00 0.00 0.00 3.67
121 122 7.385267 TCTAAAGCCCAAGTTATGTTTACGTA 58.615 34.615 0.00 0.00 0.00 3.57
122 123 6.232692 TCTAAAGCCCAAGTTATGTTTACGT 58.767 36.000 0.00 0.00 0.00 3.57
123 124 6.730960 TCTAAAGCCCAAGTTATGTTTACG 57.269 37.500 0.00 0.00 0.00 3.18
124 125 9.353999 CAAATCTAAAGCCCAAGTTATGTTTAC 57.646 33.333 0.00 0.00 0.00 2.01
125 126 8.527810 CCAAATCTAAAGCCCAAGTTATGTTTA 58.472 33.333 0.00 0.00 0.00 2.01
126 127 7.386059 CCAAATCTAAAGCCCAAGTTATGTTT 58.614 34.615 0.00 0.00 0.00 2.83
127 128 6.574269 GCCAAATCTAAAGCCCAAGTTATGTT 60.574 38.462 0.00 0.00 0.00 2.71
128 129 5.105351 GCCAAATCTAAAGCCCAAGTTATGT 60.105 40.000 0.00 0.00 0.00 2.29
129 130 5.351458 GCCAAATCTAAAGCCCAAGTTATG 58.649 41.667 0.00 0.00 0.00 1.90
130 131 4.405680 GGCCAAATCTAAAGCCCAAGTTAT 59.594 41.667 0.00 0.00 39.60 1.89
131 132 3.767131 GGCCAAATCTAAAGCCCAAGTTA 59.233 43.478 0.00 0.00 39.60 2.24
132 133 2.567169 GGCCAAATCTAAAGCCCAAGTT 59.433 45.455 0.00 0.00 39.60 2.66
133 134 2.179427 GGCCAAATCTAAAGCCCAAGT 58.821 47.619 0.00 0.00 39.60 3.16
134 135 2.967599 GGCCAAATCTAAAGCCCAAG 57.032 50.000 0.00 0.00 39.60 3.61
138 139 4.588528 TGATAATGGGCCAAATCTAAAGCC 59.411 41.667 24.45 0.00 44.99 4.35
139 140 5.068987 TGTGATAATGGGCCAAATCTAAAGC 59.931 40.000 24.45 14.04 0.00 3.51
140 141 6.322201 AGTGTGATAATGGGCCAAATCTAAAG 59.678 38.462 24.45 0.00 0.00 1.85
141 142 6.096705 CAGTGTGATAATGGGCCAAATCTAAA 59.903 38.462 24.45 12.67 0.00 1.85
142 143 5.593909 CAGTGTGATAATGGGCCAAATCTAA 59.406 40.000 24.45 14.47 0.00 2.10
143 144 5.104151 TCAGTGTGATAATGGGCCAAATCTA 60.104 40.000 24.45 15.14 0.00 1.98
144 145 3.956199 CAGTGTGATAATGGGCCAAATCT 59.044 43.478 24.45 9.19 0.00 2.40
145 146 3.953612 TCAGTGTGATAATGGGCCAAATC 59.046 43.478 11.89 17.28 0.00 2.17
146 147 3.979911 TCAGTGTGATAATGGGCCAAAT 58.020 40.909 11.89 7.49 0.00 2.32
147 148 3.448093 TCAGTGTGATAATGGGCCAAA 57.552 42.857 11.89 1.34 0.00 3.28
148 149 3.289836 CATCAGTGTGATAATGGGCCAA 58.710 45.455 11.89 0.00 34.28 4.52
149 150 2.241941 ACATCAGTGTGATAATGGGCCA 59.758 45.455 9.61 9.61 34.28 5.36
150 151 2.880890 GACATCAGTGTGATAATGGGCC 59.119 50.000 0.00 0.00 39.09 5.80
151 152 3.544684 TGACATCAGTGTGATAATGGGC 58.455 45.455 0.00 0.00 39.09 5.36
152 153 6.704289 ATTTGACATCAGTGTGATAATGGG 57.296 37.500 0.00 0.00 39.09 4.00
153 154 8.030692 ACAAATTTGACATCAGTGTGATAATGG 58.969 33.333 24.64 0.00 39.09 3.16
154 155 8.975410 ACAAATTTGACATCAGTGTGATAATG 57.025 30.769 24.64 0.00 39.09 1.90
155 156 9.017509 AGACAAATTTGACATCAGTGTGATAAT 57.982 29.630 24.64 0.00 39.09 1.28
156 157 8.394971 AGACAAATTTGACATCAGTGTGATAA 57.605 30.769 24.64 0.00 39.09 1.75
157 158 7.984422 AGACAAATTTGACATCAGTGTGATA 57.016 32.000 24.64 0.00 39.09 2.15
158 159 6.889301 AGACAAATTTGACATCAGTGTGAT 57.111 33.333 24.64 0.00 39.09 3.06
159 160 6.698008 AAGACAAATTTGACATCAGTGTGA 57.302 33.333 24.64 0.00 39.09 3.58
160 161 7.760131 AAAAGACAAATTTGACATCAGTGTG 57.240 32.000 24.64 0.00 39.09 3.82
207 208 8.863049 GCTGTCACGAAATTTCATATGAAAATT 58.137 29.630 29.42 27.00 45.81 1.82
208 209 8.028354 TGCTGTCACGAAATTTCATATGAAAAT 58.972 29.630 29.42 21.12 45.81 1.82
209 210 7.366513 TGCTGTCACGAAATTTCATATGAAAA 58.633 30.769 29.42 16.10 45.81 2.29
210 211 6.907741 TGCTGTCACGAAATTTCATATGAAA 58.092 32.000 28.27 28.27 46.60 2.69
211 212 6.493449 TGCTGTCACGAAATTTCATATGAA 57.507 33.333 14.23 14.23 0.00 2.57
212 213 6.682423 ATGCTGTCACGAAATTTCATATGA 57.318 33.333 17.99 14.08 0.00 2.15
213 214 7.408910 TGTATGCTGTCACGAAATTTCATATG 58.591 34.615 17.99 12.18 0.00 1.78
214 215 7.552458 TGTATGCTGTCACGAAATTTCATAT 57.448 32.000 17.99 0.15 0.00 1.78
215 216 6.976636 TGTATGCTGTCACGAAATTTCATA 57.023 33.333 17.99 3.84 0.00 2.15
216 217 5.878332 TGTATGCTGTCACGAAATTTCAT 57.122 34.783 17.99 0.00 0.00 2.57
217 218 5.878332 ATGTATGCTGTCACGAAATTTCA 57.122 34.783 17.99 0.00 0.00 2.69
218 219 6.314018 TCAATGTATGCTGTCACGAAATTTC 58.686 36.000 8.20 8.20 0.00 2.17
219 220 6.252967 TCAATGTATGCTGTCACGAAATTT 57.747 33.333 0.00 0.00 0.00 1.82
220 221 5.878332 TCAATGTATGCTGTCACGAAATT 57.122 34.783 0.00 0.00 0.00 1.82
221 222 5.355071 ACATCAATGTATGCTGTCACGAAAT 59.645 36.000 0.00 0.00 39.68 2.17
222 223 4.694982 ACATCAATGTATGCTGTCACGAAA 59.305 37.500 0.00 0.00 39.68 3.46
223 224 4.252878 ACATCAATGTATGCTGTCACGAA 58.747 39.130 0.00 0.00 39.68 3.85
224 225 3.860641 ACATCAATGTATGCTGTCACGA 58.139 40.909 0.00 0.00 39.68 4.35
225 226 4.604843 AACATCAATGTATGCTGTCACG 57.395 40.909 0.00 0.00 37.40 4.35
226 227 6.092670 AGTGTAACATCAATGTATGCTGTCAC 59.907 38.462 0.00 0.00 37.40 3.67
227 228 6.172630 AGTGTAACATCAATGTATGCTGTCA 58.827 36.000 0.00 0.00 37.40 3.58
228 229 6.668541 AGTGTAACATCAATGTATGCTGTC 57.331 37.500 0.00 0.00 37.40 3.51
229 230 7.201522 CGTTAGTGTAACATCAATGTATGCTGT 60.202 37.037 0.00 0.00 39.99 4.40
230 231 7.119360 CGTTAGTGTAACATCAATGTATGCTG 58.881 38.462 0.00 0.00 40.80 4.41
231 232 6.816640 ACGTTAGTGTAACATCAATGTATGCT 59.183 34.615 0.00 0.00 40.80 3.79
232 233 6.899771 CACGTTAGTGTAACATCAATGTATGC 59.100 38.462 0.00 0.00 43.15 3.14
293 294 2.620115 TGTAGACGACGGGGAATGTATC 59.380 50.000 0.00 0.00 0.00 2.24
294 295 2.658285 TGTAGACGACGGGGAATGTAT 58.342 47.619 0.00 0.00 0.00 2.29
295 296 2.127271 TGTAGACGACGGGGAATGTA 57.873 50.000 0.00 0.00 0.00 2.29
296 297 1.259609 TTGTAGACGACGGGGAATGT 58.740 50.000 0.00 0.00 0.00 2.71
297 298 2.201732 CATTGTAGACGACGGGGAATG 58.798 52.381 0.00 0.00 0.00 2.67
298 299 1.138266 CCATTGTAGACGACGGGGAAT 59.862 52.381 0.00 0.00 0.00 3.01
299 300 0.533491 CCATTGTAGACGACGGGGAA 59.467 55.000 0.00 0.00 0.00 3.97
320 321 1.362224 CGTGGGATTGGGGGATATCT 58.638 55.000 2.05 0.00 0.00 1.98
322 323 1.140134 CCCGTGGGATTGGGGGATAT 61.140 60.000 0.00 0.00 42.59 1.63
323 324 1.772567 CCCGTGGGATTGGGGGATA 60.773 63.158 0.00 0.00 42.59 2.59
357 366 0.454452 GATTCAAGGAAACACGGCGC 60.454 55.000 6.90 0.00 0.00 6.53
402 411 4.364686 GGGGGAGGTGAAGGGGGA 62.365 72.222 0.00 0.00 0.00 4.81
405 414 1.229984 AAGAGGGGGAGGTGAAGGG 60.230 63.158 0.00 0.00 0.00 3.95
409 418 1.081092 CAGGAAGAGGGGGAGGTGA 59.919 63.158 0.00 0.00 0.00 4.02
417 426 1.153549 GTACGCTGCAGGAAGAGGG 60.154 63.158 17.12 0.00 0.00 4.30
430 439 3.055905 GCGCTTCAGTGACGTACGC 62.056 63.158 16.72 8.98 37.93 4.42
436 445 3.760673 CGAGAGCGCTTCAGTGAC 58.239 61.111 13.26 0.00 0.00 3.67
491 500 1.170290 AAAAAGTCCCGGCTTGGTCG 61.170 55.000 0.00 0.00 35.15 4.79
552 561 0.907704 TGCTCGCTCCCTCCCTTTAA 60.908 55.000 0.00 0.00 0.00 1.52
555 564 2.366167 ATGCTCGCTCCCTCCCTT 60.366 61.111 0.00 0.00 0.00 3.95
576 585 1.664649 CTGGACGCGCTTTGTCTCA 60.665 57.895 5.73 5.52 36.58 3.27
589 598 0.391661 ACGCACATGTGGATCTGGAC 60.392 55.000 26.55 6.85 0.00 4.02
609 618 0.882474 CTTGACTTCCGAGGAGACGT 59.118 55.000 0.00 0.00 0.00 4.34
617 626 2.606308 GCGTACAGTTCTTGACTTCCGA 60.606 50.000 0.00 0.00 36.10 4.55
632 641 1.000233 GAAGCAAGACGACGCGTACA 61.000 55.000 13.97 0.00 41.37 2.90
636 645 1.626654 AATGGAAGCAAGACGACGCG 61.627 55.000 3.53 3.53 0.00 6.01
642 651 3.365364 CGTGAGGAAAATGGAAGCAAGAC 60.365 47.826 0.00 0.00 0.00 3.01
736 745 1.138859 TGGGACGAATCTGGCACATAG 59.861 52.381 0.00 0.00 38.20 2.23
741 750 1.900351 CTCTGGGACGAATCTGGCA 59.100 57.895 0.00 0.00 0.00 4.92
750 759 2.435586 CCTGCTTGCTCTGGGACG 60.436 66.667 0.00 0.00 0.00 4.79
755 764 2.103042 GTACGCCCTGCTTGCTCTG 61.103 63.158 0.00 0.00 0.00 3.35
783 799 6.406849 GCCCCATTATTAGAACTTTGCAATGA 60.407 38.462 18.35 0.00 0.00 2.57
786 806 4.161377 GGCCCCATTATTAGAACTTTGCAA 59.839 41.667 0.00 0.00 0.00 4.08
830 853 1.742750 GCCATAGGACGAGGTGTTTCC 60.743 57.143 0.00 0.00 0.00 3.13
831 854 1.653151 GCCATAGGACGAGGTGTTTC 58.347 55.000 0.00 0.00 0.00 2.78
832 855 0.252197 GGCCATAGGACGAGGTGTTT 59.748 55.000 0.00 0.00 0.00 2.83
838 861 0.758734 TCCAATGGCCATAGGACGAG 59.241 55.000 21.15 3.00 29.56 4.18
873 902 0.395311 ATGGCCTGAGCAAGATGGTG 60.395 55.000 3.32 0.00 42.56 4.17
874 903 0.106819 GATGGCCTGAGCAAGATGGT 60.107 55.000 3.32 0.00 42.56 3.55
875 904 0.106868 TGATGGCCTGAGCAAGATGG 60.107 55.000 3.32 0.00 42.56 3.51
878 907 0.913924 TGATGATGGCCTGAGCAAGA 59.086 50.000 3.32 0.00 42.56 3.02
879 908 1.022735 GTGATGATGGCCTGAGCAAG 58.977 55.000 3.32 0.00 42.56 4.01
880 909 0.394762 GGTGATGATGGCCTGAGCAA 60.395 55.000 3.32 0.00 42.56 3.91
881 910 1.225426 GGTGATGATGGCCTGAGCA 59.775 57.895 3.32 0.00 42.56 4.26
885 932 1.820906 CACCGGTGATGATGGCCTG 60.821 63.158 31.31 0.00 0.00 4.85
904 951 0.827925 AGAGAACACGCAGAGGTGGA 60.828 55.000 0.00 0.00 42.23 4.02
915 962 2.059541 GTACCGAAGCACAGAGAACAC 58.940 52.381 0.00 0.00 0.00 3.32
918 965 1.544691 GAGGTACCGAAGCACAGAGAA 59.455 52.381 6.18 0.00 0.00 2.87
926 984 0.458716 GTGAGCAGAGGTACCGAAGC 60.459 60.000 15.00 15.00 0.00 3.86
966 1024 5.005628 AGCAATTTTCCCCTTAACCTGTA 57.994 39.130 0.00 0.00 0.00 2.74
979 1037 4.853924 TGGAAGGAGACAAGCAATTTTC 57.146 40.909 0.00 0.00 0.00 2.29
984 1042 1.074405 AGCATGGAAGGAGACAAGCAA 59.926 47.619 0.00 0.00 34.08 3.91
986 1044 2.093235 AGTAGCATGGAAGGAGACAAGC 60.093 50.000 0.00 0.00 0.00 4.01
987 1045 3.196469 TGAGTAGCATGGAAGGAGACAAG 59.804 47.826 0.00 0.00 0.00 3.16
992 1086 3.529533 CTTGTGAGTAGCATGGAAGGAG 58.470 50.000 0.00 0.00 0.00 3.69
1005 1099 1.066605 CTTGCTTGCTTGCTTGTGAGT 59.933 47.619 3.47 0.00 0.00 3.41
1017 1111 1.193874 GAAATGTGCTTGCTTGCTTGC 59.806 47.619 3.47 0.00 0.00 4.01
1021 1115 0.788391 GCAGAAATGTGCTTGCTTGC 59.212 50.000 0.00 0.00 40.54 4.01
1029 1123 0.953727 TGGTGTGAGCAGAAATGTGC 59.046 50.000 0.00 0.00 44.35 4.57
1030 1124 1.948834 TGTGGTGTGAGCAGAAATGTG 59.051 47.619 0.00 0.00 0.00 3.21
1031 1125 2.158769 TCTGTGGTGTGAGCAGAAATGT 60.159 45.455 0.00 0.00 36.46 2.71
1033 1127 2.498167 GTCTGTGGTGTGAGCAGAAAT 58.502 47.619 0.00 0.00 40.40 2.17
1034 1128 1.475034 GGTCTGTGGTGTGAGCAGAAA 60.475 52.381 0.00 0.00 40.40 2.52
1035 1129 0.106708 GGTCTGTGGTGTGAGCAGAA 59.893 55.000 0.00 0.00 40.40 3.02
1036 1130 1.048160 TGGTCTGTGGTGTGAGCAGA 61.048 55.000 0.00 0.00 36.04 4.26
1037 1131 0.882042 GTGGTCTGTGGTGTGAGCAG 60.882 60.000 0.00 0.00 40.63 4.24
1038 1132 1.146041 GTGGTCTGTGGTGTGAGCA 59.854 57.895 0.00 0.00 38.20 4.26
1039 1133 1.146041 TGTGGTCTGTGGTGTGAGC 59.854 57.895 0.00 0.00 0.00 4.26
1040 1134 0.532862 GGTGTGGTCTGTGGTGTGAG 60.533 60.000 0.00 0.00 0.00 3.51
1041 1135 1.268283 TGGTGTGGTCTGTGGTGTGA 61.268 55.000 0.00 0.00 0.00 3.58
1042 1136 0.179020 ATGGTGTGGTCTGTGGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
1043 1137 0.550914 AATGGTGTGGTCTGTGGTGT 59.449 50.000 0.00 0.00 0.00 4.16
1044 1138 0.953727 CAATGGTGTGGTCTGTGGTG 59.046 55.000 0.00 0.00 0.00 4.17
1045 1139 0.550914 ACAATGGTGTGGTCTGTGGT 59.449 50.000 0.00 0.00 36.31 4.16
1046 1140 1.337703 CAACAATGGTGTGGTCTGTGG 59.662 52.381 0.00 0.00 38.27 4.17
1047 1141 2.023673 ACAACAATGGTGTGGTCTGTG 58.976 47.619 1.82 0.00 37.32 3.66
1048 1142 2.435372 ACAACAATGGTGTGGTCTGT 57.565 45.000 1.82 0.00 37.32 3.41
1052 1146 1.494721 AGAGGACAACAATGGTGTGGT 59.505 47.619 9.37 0.00 45.13 4.16
1053 1147 2.154462 GAGAGGACAACAATGGTGTGG 58.846 52.381 9.37 0.00 38.27 4.17
1076 1170 0.040958 CAACACGGAGAAGCACAAGC 60.041 55.000 0.00 0.00 42.56 4.01
1081 1175 1.493772 CGTAACAACACGGAGAAGCA 58.506 50.000 0.00 0.00 38.26 3.91
1089 1183 0.382151 GAACACGGCGTAACAACACG 60.382 55.000 14.22 0.00 44.71 4.49
1095 1189 0.167251 CCATTGGAACACGGCGTAAC 59.833 55.000 14.22 6.99 39.29 2.50
1098 1192 3.361977 GCCATTGGAACACGGCGT 61.362 61.111 6.77 6.77 39.29 5.68
1100 1194 4.114997 CCGCCATTGGAACACGGC 62.115 66.667 6.95 0.00 37.44 5.68
1101 1195 4.114997 GCCGCCATTGGAACACGG 62.115 66.667 6.95 10.86 45.30 4.94
1102 1196 4.459331 CGCCGCCATTGGAACACG 62.459 66.667 6.95 0.00 39.29 4.49
1120 1214 1.005512 CGACATTGACCACCACCGA 60.006 57.895 0.00 0.00 0.00 4.69
1159 1253 0.802607 GACGCCTTCTCCATCACGAC 60.803 60.000 0.00 0.00 0.00 4.34
1431 1546 5.535030 GGGAAAGAGTTTTACCACACTGAAT 59.465 40.000 0.00 0.00 45.31 2.57
1527 1642 3.057033 AGGCATTCATTTCAGTCACAAGC 60.057 43.478 0.00 0.00 0.00 4.01
1618 1733 4.677250 GCTGGCAATTTTCTCTGGATCAAG 60.677 45.833 0.00 0.00 0.00 3.02
1761 1885 4.582656 TCAGGGTCATTGTAAACAAGTTGG 59.417 41.667 7.96 0.00 39.47 3.77
1817 1941 3.007635 TCAAAGCTGTCAGAGATGCATG 58.992 45.455 2.46 0.00 0.00 4.06
1821 1945 3.374367 CCACATCAAAGCTGTCAGAGATG 59.626 47.826 3.32 12.42 38.92 2.90
1822 1946 3.262660 TCCACATCAAAGCTGTCAGAGAT 59.737 43.478 3.32 0.00 0.00 2.75
1890 2014 0.108424 CGGAAGCTGCTACTTCTGCT 60.108 55.000 0.90 0.00 43.95 4.24
1898 2124 2.742053 GTTTTCATGACGGAAGCTGCTA 59.258 45.455 0.90 0.00 0.00 3.49
1909 2258 4.508124 CCTATCTAGCGGTGTTTTCATGAC 59.492 45.833 0.00 0.00 0.00 3.06
1910 2259 4.693283 CCTATCTAGCGGTGTTTTCATGA 58.307 43.478 0.00 0.00 0.00 3.07
1932 2281 3.462021 CCTGCTAACTACATCCTGAAGC 58.538 50.000 0.00 0.00 0.00 3.86
1947 2296 0.909623 GGAGGTACCTTTGCCTGCTA 59.090 55.000 17.53 0.00 41.96 3.49
2206 2559 6.544931 ACAATCTCATCAACCATATTCACCAG 59.455 38.462 0.00 0.00 0.00 4.00
2315 2668 3.865011 TGTTGCTTCTGCTTGAAACAA 57.135 38.095 5.28 5.28 38.11 2.83
2344 2697 1.134280 CGGCAAGATTCCAGACTCCAT 60.134 52.381 0.00 0.00 0.00 3.41
2361 2714 2.301577 AACTGAGCTTGAGTATCGGC 57.698 50.000 0.08 0.00 38.61 5.54
2526 2885 7.172019 AGTTCATTGAAAATCTGTTTGCCAATC 59.828 33.333 0.00 0.00 33.20 2.67
2746 3145 1.346068 ACTCTGACTTGGTTCCTCAGC 59.654 52.381 2.86 0.00 32.88 4.26
2802 3237 2.108075 TCTTCCTGGTTCCTTGCATGAA 59.892 45.455 0.00 0.00 0.00 2.57
3399 3900 7.254117 CGACTGCTAGATTTATCAACATCGTTT 60.254 37.037 0.00 0.00 0.00 3.60
3543 4068 8.141835 TGTTACAATGAGAAATATGGATCACG 57.858 34.615 0.00 0.00 0.00 4.35
3621 4149 1.079503 GCAACGTAAGCTCCTTCAGG 58.920 55.000 5.73 0.00 45.62 3.86
3829 4369 3.953612 ACACTGAGCTTTGGTGATTCAAA 59.046 39.130 17.34 0.00 35.60 2.69
4066 4621 6.286240 ACATGAACACAGCTCTCTTATACA 57.714 37.500 0.00 0.00 0.00 2.29
4073 4634 3.243168 TGCAAAACATGAACACAGCTCTC 60.243 43.478 0.00 0.00 0.00 3.20
4094 4655 2.620115 ACTGACAAATCTTGCAGGTGTG 59.380 45.455 0.00 0.00 38.35 3.82
4347 4911 7.763071 AGCTTCTTGCAATAAAGAATTTCCATC 59.237 33.333 20.21 4.80 43.41 3.51
4474 5038 4.595781 TCCAGATGATGATGGTGATGATGA 59.404 41.667 0.00 0.00 37.84 2.92
4483 5047 3.687125 CCCAATCTCCAGATGATGATGG 58.313 50.000 0.00 0.00 37.97 3.51
4484 5048 3.082548 GCCCAATCTCCAGATGATGATG 58.917 50.000 0.00 0.00 34.49 3.07
4485 5049 2.290134 CGCCCAATCTCCAGATGATGAT 60.290 50.000 0.00 0.00 34.49 2.45
4486 5050 1.071228 CGCCCAATCTCCAGATGATGA 59.929 52.381 0.00 0.00 34.49 2.92
4487 5051 1.520494 CGCCCAATCTCCAGATGATG 58.480 55.000 0.00 0.00 34.49 3.07
4488 5052 0.399454 CCGCCCAATCTCCAGATGAT 59.601 55.000 0.00 0.00 34.49 2.45
4489 5053 0.690744 TCCGCCCAATCTCCAGATGA 60.691 55.000 0.00 0.00 34.49 2.92
4490 5054 0.250209 CTCCGCCCAATCTCCAGATG 60.250 60.000 0.00 0.00 34.49 2.90
4491 5055 0.399091 TCTCCGCCCAATCTCCAGAT 60.399 55.000 0.00 0.00 36.07 2.90
4572 5136 2.856760 TGTCTAGAGCCTTCAGGGAT 57.143 50.000 0.00 0.00 37.23 3.85
4812 5376 6.400091 GCTTACTTCCGTAATAATGAGCATCG 60.400 42.308 0.00 0.00 34.57 3.84
4900 5482 6.869315 TCTGTCATACTACTAGTGATGCTC 57.131 41.667 5.39 4.57 0.00 4.26
5045 5640 2.886523 CCATGTCTTTGGTTTGAGCAGA 59.113 45.455 0.00 0.00 31.74 4.26
5273 5871 6.148278 GAGAATAGCTCCACCCCAAGTGAA 62.148 50.000 0.00 0.00 46.87 3.18
5312 5910 0.601558 CAGCATGGCAGCAACTTCTT 59.398 50.000 10.71 0.00 36.85 2.52
5321 5919 1.978712 CTCGCAGTTCAGCATGGCAG 61.979 60.000 0.00 0.00 36.16 4.85
5407 6021 3.171528 AGGAGGTGGGTACAAGTACTTC 58.828 50.000 4.77 0.00 36.36 3.01
5579 6197 8.417106 CCGATATATGCACTAGATGGAATACTT 58.583 37.037 0.00 0.00 29.34 2.24
5588 6206 4.026744 ACCTGCCGATATATGCACTAGAT 58.973 43.478 0.00 0.00 33.17 1.98
5593 6211 2.169832 ACACCTGCCGATATATGCAC 57.830 50.000 0.00 0.00 33.17 4.57
5608 6228 8.986477 AAATCAACAGCTTCATAAATAACACC 57.014 30.769 0.00 0.00 0.00 4.16
5609 6229 9.076596 GGAAATCAACAGCTTCATAAATAACAC 57.923 33.333 0.00 0.00 0.00 3.32
5610 6230 8.250332 GGGAAATCAACAGCTTCATAAATAACA 58.750 33.333 0.00 0.00 0.00 2.41
5611 6231 8.470002 AGGGAAATCAACAGCTTCATAAATAAC 58.530 33.333 0.00 0.00 0.00 1.89
5613 6233 8.469200 CAAGGGAAATCAACAGCTTCATAAATA 58.531 33.333 0.00 0.00 0.00 1.40
5641 6271 4.201990 CCTTCATAAGATCTGGTGCAAAGC 60.202 45.833 0.00 0.00 0.00 3.51
5644 6274 3.371917 CCCCTTCATAAGATCTGGTGCAA 60.372 47.826 0.00 0.00 0.00 4.08
5674 6308 8.591940 AGCATCTATGTCTCTATGCAAAATCTA 58.408 33.333 8.65 0.00 45.62 1.98
5680 6314 5.796424 TCAGCATCTATGTCTCTATGCAA 57.204 39.130 8.65 0.00 45.62 4.08
5685 6319 8.699130 TCTTCAAAATCAGCATCTATGTCTCTA 58.301 33.333 0.00 0.00 0.00 2.43
5688 6322 8.749026 AATCTTCAAAATCAGCATCTATGTCT 57.251 30.769 0.00 0.00 0.00 3.41
5696 6330 6.927416 TGTTGCTAATCTTCAAAATCAGCAT 58.073 32.000 0.00 0.00 37.39 3.79
5713 6347 3.888323 TCACAGCATTTTTCCTGTTGCTA 59.112 39.130 0.00 0.00 43.25 3.49
5714 6348 2.694628 TCACAGCATTTTTCCTGTTGCT 59.305 40.909 0.00 0.00 45.86 3.91
5715 6349 3.096489 TCACAGCATTTTTCCTGTTGC 57.904 42.857 0.00 0.00 40.12 4.17
5716 6350 4.873817 TGATCACAGCATTTTTCCTGTTG 58.126 39.130 0.00 0.00 40.12 3.33
5717 6351 5.163426 TGTTGATCACAGCATTTTTCCTGTT 60.163 36.000 0.00 0.00 40.12 3.16
5718 6352 4.341806 TGTTGATCACAGCATTTTTCCTGT 59.658 37.500 0.00 0.00 42.67 4.00
5719 6353 4.873817 TGTTGATCACAGCATTTTTCCTG 58.126 39.130 0.00 0.00 32.65 3.86
5760 6411 3.500448 TGCCATTACTCTGTTTCCACA 57.500 42.857 0.00 0.00 0.00 4.17
5761 6412 5.183904 AGAAATGCCATTACTCTGTTTCCAC 59.816 40.000 0.00 0.00 0.00 4.02
5770 6421 4.631377 GCCCAAAAAGAAATGCCATTACTC 59.369 41.667 0.00 0.00 0.00 2.59
5773 6424 3.259374 TCGCCCAAAAAGAAATGCCATTA 59.741 39.130 0.00 0.00 0.00 1.90
5778 6429 1.394572 GCATCGCCCAAAAAGAAATGC 59.605 47.619 0.00 0.00 0.00 3.56
5784 6435 1.352114 CACATGCATCGCCCAAAAAG 58.648 50.000 0.00 0.00 0.00 2.27
5840 6492 2.161855 CCAGCAGCTGGTTAACATTGA 58.838 47.619 30.97 0.00 45.82 2.57
5852 6504 1.423161 AGTTCTTTCTTCCCAGCAGCT 59.577 47.619 0.00 0.00 0.00 4.24
5868 6520 2.617274 GGGTCTGTGGCGCAAGTTC 61.617 63.158 10.83 0.00 41.68 3.01
5869 6521 2.594592 GGGTCTGTGGCGCAAGTT 60.595 61.111 10.83 0.00 41.68 2.66
5871 6523 3.052082 CAGGGTCTGTGGCGCAAG 61.052 66.667 10.83 3.32 43.44 4.01
5872 6524 3.825160 GACAGGGTCTGTGGCGCAA 62.825 63.158 10.83 0.00 45.44 4.85
5877 6529 4.742201 CCGCGACAGGGTCTGTGG 62.742 72.222 8.23 5.56 45.44 4.17
5878 6530 3.991051 ACCGCGACAGGGTCTGTG 61.991 66.667 8.23 0.22 45.44 3.66
5880 6532 4.742201 CCACCGCGACAGGGTCTG 62.742 72.222 8.23 0.00 34.97 3.51
5882 6534 4.736896 GACCACCGCGACAGGGTC 62.737 72.222 8.23 14.85 42.60 4.46
5884 6536 4.742201 CTGACCACCGCGACAGGG 62.742 72.222 8.23 5.65 35.02 4.45
5885 6537 4.742201 CCTGACCACCGCGACAGG 62.742 72.222 8.23 14.03 42.71 4.00
5892 6544 3.832237 AACAGCTGCCTGACCACCG 62.832 63.158 15.27 0.00 41.77 4.94
5893 6545 2.113986 AACAGCTGCCTGACCACC 59.886 61.111 15.27 0.00 41.77 4.61
5894 6546 0.819259 TTCAACAGCTGCCTGACCAC 60.819 55.000 15.27 0.00 41.77 4.16
5895 6547 0.535780 CTTCAACAGCTGCCTGACCA 60.536 55.000 15.27 2.30 41.77 4.02
5896 6548 0.250467 TCTTCAACAGCTGCCTGACC 60.250 55.000 15.27 0.00 41.77 4.02
5897 6549 0.871057 GTCTTCAACAGCTGCCTGAC 59.129 55.000 15.27 11.37 41.77 3.51
5898 6550 0.761187 AGTCTTCAACAGCTGCCTGA 59.239 50.000 15.27 14.30 41.77 3.86
5899 6551 0.873054 CAGTCTTCAACAGCTGCCTG 59.127 55.000 15.27 11.95 44.80 4.85
5900 6552 0.471617 ACAGTCTTCAACAGCTGCCT 59.528 50.000 15.27 0.00 32.69 4.75
5901 6553 1.265365 GAACAGTCTTCAACAGCTGCC 59.735 52.381 15.27 0.00 32.69 4.85
5902 6554 1.942657 TGAACAGTCTTCAACAGCTGC 59.057 47.619 15.27 0.00 32.69 5.25
5903 6555 3.002042 CAGTGAACAGTCTTCAACAGCTG 59.998 47.826 13.48 13.48 34.54 4.24
5904 6556 3.118629 TCAGTGAACAGTCTTCAACAGCT 60.119 43.478 0.00 0.00 0.00 4.24
5905 6557 3.198068 TCAGTGAACAGTCTTCAACAGC 58.802 45.455 0.00 0.00 0.00 4.40
5906 6558 5.111989 TCTTCAGTGAACAGTCTTCAACAG 58.888 41.667 0.08 0.00 0.00 3.16
5907 6559 5.084818 TCTTCAGTGAACAGTCTTCAACA 57.915 39.130 0.08 0.00 0.00 3.33
5908 6560 6.610741 ATTCTTCAGTGAACAGTCTTCAAC 57.389 37.500 0.08 0.00 0.00 3.18
5909 6561 7.442364 CCTAATTCTTCAGTGAACAGTCTTCAA 59.558 37.037 0.08 0.00 0.00 2.69
5910 6562 6.931281 CCTAATTCTTCAGTGAACAGTCTTCA 59.069 38.462 0.08 0.00 0.00 3.02
5911 6563 7.155328 TCCTAATTCTTCAGTGAACAGTCTTC 58.845 38.462 0.08 0.00 0.00 2.87
5912 6564 7.067496 TCCTAATTCTTCAGTGAACAGTCTT 57.933 36.000 0.08 0.00 0.00 3.01
5913 6565 6.672266 TCCTAATTCTTCAGTGAACAGTCT 57.328 37.500 0.08 0.00 0.00 3.24
5914 6566 8.254508 AGTATCCTAATTCTTCAGTGAACAGTC 58.745 37.037 0.08 0.00 0.00 3.51
5915 6567 8.140112 AGTATCCTAATTCTTCAGTGAACAGT 57.860 34.615 0.08 0.00 0.00 3.55
5916 6568 8.474025 AGAGTATCCTAATTCTTCAGTGAACAG 58.526 37.037 0.08 0.00 33.66 3.16
5936 6588 8.725148 CAGAAACTGCAGAAAATAACAGAGTAT 58.275 33.333 23.35 0.00 34.25 2.12
5938 6590 6.767902 TCAGAAACTGCAGAAAATAACAGAGT 59.232 34.615 23.35 0.00 34.25 3.24
5953 6605 3.968649 TGCAAGAAACATCAGAAACTGC 58.031 40.909 0.00 0.00 0.00 4.40
5956 6608 4.925068 ACACTGCAAGAAACATCAGAAAC 58.075 39.130 0.00 0.00 37.43 2.78
5957 6609 5.581126 AACACTGCAAGAAACATCAGAAA 57.419 34.783 0.00 0.00 37.43 2.52
5958 6610 5.450412 GGAAACACTGCAAGAAACATCAGAA 60.450 40.000 0.00 0.00 37.43 3.02
5959 6611 4.036734 GGAAACACTGCAAGAAACATCAGA 59.963 41.667 0.00 0.00 37.43 3.27
5960 6612 4.037208 AGGAAACACTGCAAGAAACATCAG 59.963 41.667 0.00 0.00 37.43 2.90
5961 6613 3.953612 AGGAAACACTGCAAGAAACATCA 59.046 39.130 0.00 0.00 37.43 3.07
5962 6614 4.540824 GAGGAAACACTGCAAGAAACATC 58.459 43.478 0.00 0.00 37.43 3.06
5963 6615 3.003689 CGAGGAAACACTGCAAGAAACAT 59.996 43.478 0.00 0.00 37.43 2.71
5964 6616 2.354510 CGAGGAAACACTGCAAGAAACA 59.645 45.455 0.00 0.00 37.43 2.83
6023 6675 5.126067 GGAACACATAGTAACAGGCATCAT 58.874 41.667 0.00 0.00 0.00 2.45
6027 6679 2.300723 ACGGAACACATAGTAACAGGCA 59.699 45.455 0.00 0.00 0.00 4.75
6041 6693 6.256757 GTCCAATTTTCATTGAAAACGGAACA 59.743 34.615 29.05 15.91 42.61 3.18
6045 6697 4.149747 CCGTCCAATTTTCATTGAAAACGG 59.850 41.667 25.77 25.77 44.72 4.44
6047 6699 4.450757 CCCCGTCCAATTTTCATTGAAAAC 59.549 41.667 23.11 12.24 42.98 2.43
6050 6702 3.006323 CACCCCGTCCAATTTTCATTGAA 59.994 43.478 0.00 0.00 42.35 2.69
6065 6717 4.887190 AAAAGGCGCACACCCCGT 62.887 61.111 10.83 0.00 0.00 5.28
6071 6723 1.169661 AACCGATCAAAAGGCGCACA 61.170 50.000 10.83 0.00 0.00 4.57
6072 6724 1.579429 AACCGATCAAAAGGCGCAC 59.421 52.632 10.83 0.00 0.00 5.34
6073 6725 4.073052 AACCGATCAAAAGGCGCA 57.927 50.000 10.83 0.00 0.00 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.