Multiple sequence alignment - TraesCS7A01G533100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G533100 chr7A 100.000 6825 0 0 1 6825 711658579 711651755 0.000000e+00 12604.0
1 TraesCS7A01G533100 chr7A 83.945 1744 236 25 1308 3036 711793169 711791455 0.000000e+00 1629.0
2 TraesCS7A01G533100 chr7A 82.992 1317 180 27 3056 4344 711791334 711790034 0.000000e+00 1151.0
3 TraesCS7A01G533100 chr7A 87.670 884 63 18 4898 5754 711789540 711788676 0.000000e+00 987.0
4 TraesCS7A01G533100 chr7A 90.110 273 27 0 978 1250 711793526 711793254 8.420000e-94 355.0
5 TraesCS7A01G533100 chr7A 90.278 72 6 1 826 896 711793644 711793573 7.290000e-15 93.5
6 TraesCS7A01G533100 chr7A 96.296 54 2 0 1753 1806 711778978 711778925 9.430000e-14 89.8
7 TraesCS7A01G533100 chr7B 94.428 3805 152 23 913 4713 712100639 712096891 0.000000e+00 5797.0
8 TraesCS7A01G533100 chr7B 86.731 1462 121 38 4344 5754 712241598 712240159 0.000000e+00 1557.0
9 TraesCS7A01G533100 chr7B 82.470 1312 170 34 3053 4340 712242977 712241702 0.000000e+00 1094.0
10 TraesCS7A01G533100 chr7B 93.760 625 33 5 5036 5657 712095757 712095136 0.000000e+00 933.0
11 TraesCS7A01G533100 chr7B 86.423 685 36 26 5606 6236 712095152 712094471 0.000000e+00 697.0
12 TraesCS7A01G533100 chr7B 87.657 559 60 8 1308 1864 712250074 712249523 5.770000e-180 641.0
13 TraesCS7A01G533100 chr7B 87.872 470 33 7 4251 4716 712096883 712096434 1.300000e-146 531.0
14 TraesCS7A01G533100 chr7B 91.667 372 30 1 121 491 712101553 712101182 1.310000e-141 514.0
15 TraesCS7A01G533100 chr7B 94.931 217 6 2 4759 4970 712095970 712095754 1.100000e-87 335.0
16 TraesCS7A01G533100 chr7B 94.805 154 8 0 719 872 712100974 712100821 2.460000e-59 241.0
17 TraesCS7A01G533100 chr7B 85.470 117 3 4 607 722 712101113 712101010 7.240000e-20 110.0
18 TraesCS7A01G533100 chr7B 93.443 61 4 0 39 99 712101611 712101551 2.620000e-14 91.6
19 TraesCS7A01G533100 chr7B 96.154 52 2 0 860 911 712100803 712100752 1.220000e-12 86.1
20 TraesCS7A01G533100 chr7B 97.917 48 1 0 4715 4762 712096352 712096305 4.390000e-12 84.2
21 TraesCS7A01G533100 chr7B 97.727 44 1 0 492 535 712101148 712101105 7.340000e-10 76.8
22 TraesCS7A01G533100 chr7D 89.284 2445 163 43 3868 6237 618040393 618037973 0.000000e+00 2972.0
23 TraesCS7A01G533100 chr7D 84.548 1715 216 31 1308 3010 618043072 618041395 0.000000e+00 1653.0
24 TraesCS7A01G533100 chr7D 81.435 878 126 21 2968 3819 618041392 618040526 0.000000e+00 684.0
25 TraesCS7A01G533100 chr7D 88.849 278 26 2 978 1250 618043434 618043157 3.050000e-88 337.0
26 TraesCS7A01G533100 chr7D 88.446 251 15 6 6578 6815 618036971 618036722 2.410000e-74 291.0
27 TraesCS7A01G533100 chr7D 92.929 99 6 1 6316 6414 618037055 618036958 7.140000e-30 143.0
28 TraesCS7A01G533100 chr7D 89.773 88 5 3 524 608 609684052 609684138 7.240000e-20 110.0
29 TraesCS7A01G533100 chr7D 95.522 67 0 1 544 607 11122806 11122872 3.370000e-18 104.0
30 TraesCS7A01G533100 chr7D 90.789 76 2 4 544 616 17862666 17862593 5.630000e-16 97.1
31 TraesCS7A01G533100 chr1D 78.475 1259 188 47 1271 2500 494466881 494468085 0.000000e+00 747.0
32 TraesCS7A01G533100 chr1B 75.635 1457 241 67 1103 2500 687713103 687714504 2.700000e-173 619.0
33 TraesCS7A01G533100 chr1B 79.554 269 39 13 5149 5407 685616537 685616275 1.960000e-40 178.0
34 TraesCS7A01G533100 chr1B 100.000 29 0 0 4991 5019 685616695 685616667 3.000000e-03 54.7
35 TraesCS7A01G533100 chr1A 76.653 1255 203 57 1267 2500 593281247 593282432 4.520000e-171 612.0
36 TraesCS7A01G533100 chr1A 77.365 539 84 26 4947 5464 593285971 593286492 1.120000e-72 285.0
37 TraesCS7A01G533100 chr1A 89.474 95 10 0 4800 4894 593285762 593285856 3.340000e-23 121.0
38 TraesCS7A01G533100 chr1A 91.358 81 7 0 5746 5826 593286808 593286888 2.010000e-20 111.0
39 TraesCS7A01G533100 chr6A 94.203 69 1 2 544 609 6922825 6922893 1.210000e-17 102.0
40 TraesCS7A01G533100 chr3B 95.455 66 0 1 544 606 177086427 177086362 1.210000e-17 102.0
41 TraesCS7A01G533100 chr2A 92.958 71 1 2 544 610 11897816 11897886 4.360000e-17 100.0
42 TraesCS7A01G533100 chr5A 90.909 77 2 4 544 617 687764472 687764398 1.570000e-16 99.0
43 TraesCS7A01G533100 chrUn 91.667 72 3 1 544 612 300566598 300566527 5.630000e-16 97.1
44 TraesCS7A01G533100 chrUn 93.939 66 1 1 544 606 353964318 353964383 5.630000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G533100 chr7A 711651755 711658579 6824 True 12604.000000 12604 100.000000 1 6825 1 chr7A.!!$R1 6824
1 TraesCS7A01G533100 chr7A 711788676 711793644 4968 True 843.100000 1629 86.999000 826 5754 5 chr7A.!!$R3 4928
2 TraesCS7A01G533100 chr7B 712240159 712242977 2818 True 1325.500000 1557 84.600500 3053 5754 2 chr7B.!!$R3 2701
3 TraesCS7A01G533100 chr7B 712094471 712101611 7140 True 791.391667 5797 92.883083 39 6236 12 chr7B.!!$R2 6197
4 TraesCS7A01G533100 chr7B 712249523 712250074 551 True 641.000000 641 87.657000 1308 1864 1 chr7B.!!$R1 556
5 TraesCS7A01G533100 chr7D 618036722 618043434 6712 True 1013.333333 2972 87.581833 978 6815 6 chr7D.!!$R2 5837
6 TraesCS7A01G533100 chr1D 494466881 494468085 1204 False 747.000000 747 78.475000 1271 2500 1 chr1D.!!$F1 1229
7 TraesCS7A01G533100 chr1B 687713103 687714504 1401 False 619.000000 619 75.635000 1103 2500 1 chr1B.!!$F1 1397
8 TraesCS7A01G533100 chr1A 593281247 593286888 5641 False 282.250000 612 83.712500 1267 5826 4 chr1A.!!$F1 4559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
594 629 0.044855 AGAGGGGGTAAGGAGCATGT 59.955 55.000 0.00 0.0 0.0 3.21 F
595 630 0.919710 GAGGGGGTAAGGAGCATGTT 59.080 55.000 0.00 0.0 0.0 2.71 F
1700 2015 1.359474 AGAGAGTGAAGAGGCCCTACA 59.641 52.381 0.00 0.0 0.0 2.74 F
1979 2302 1.902508 CAGGGGCTGTCTTCTACTTCA 59.097 52.381 0.00 0.0 0.0 3.02 F
2909 3680 0.613260 TCTCGTATGGCCAGCTTTGT 59.387 50.000 13.05 0.0 0.0 2.83 F
3772 4724 0.193574 AGACCCCAAGTTCCTCCTGA 59.806 55.000 0.00 0.0 0.0 3.86 F
4064 5151 2.029380 TGTTGACTGCTGTGTATACGCT 60.029 45.455 16.94 0.0 0.0 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2485 2816 2.298610 ACTCTGTCTCACGTCTGTTCA 58.701 47.619 0.0 0.0 0.00 3.18 R
2579 3344 3.806949 AAGTGCAGGGAATAGACCAAA 57.193 42.857 0.0 0.0 0.00 3.28 R
2909 3680 0.392706 TTTGCAGAGGAACGAGCTCA 59.607 50.000 15.4 0.0 0.00 4.26 R
3116 4042 0.464452 GGGGTCCGAGTCATAGTTGG 59.536 60.000 0.0 0.0 0.00 3.77 R
4156 5246 1.304381 GCAGCTTCCCCACAATGGA 60.304 57.895 0.0 0.0 40.96 3.41 R
5404 8229 1.065926 TGAAGCTCATCTGCGGTGAAT 60.066 47.619 0.0 0.0 38.13 2.57 R
5831 8777 0.107017 CCACTACCCCCAGCATCAAG 60.107 60.000 0.0 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 2.916716 GTGAAGCACAAAACACACAGTG 59.083 45.455 0.00 0.00 35.53 3.66
91 92 4.813296 AAACACACAGTGCTAGCTTTAC 57.187 40.909 17.23 5.88 36.98 2.01
96 97 4.273480 CACACAGTGCTAGCTTTACTTTGT 59.727 41.667 17.23 16.40 36.19 2.83
97 98 4.881850 ACACAGTGCTAGCTTTACTTTGTT 59.118 37.500 17.23 3.38 33.05 2.83
98 99 5.007724 ACACAGTGCTAGCTTTACTTTGTTC 59.992 40.000 17.23 0.00 33.05 3.18
99 100 5.237344 CACAGTGCTAGCTTTACTTTGTTCT 59.763 40.000 17.23 0.00 0.00 3.01
100 101 5.823045 ACAGTGCTAGCTTTACTTTGTTCTT 59.177 36.000 17.23 0.00 0.00 2.52
101 102 6.017852 ACAGTGCTAGCTTTACTTTGTTCTTC 60.018 38.462 17.23 0.00 0.00 2.87
102 103 6.203723 CAGTGCTAGCTTTACTTTGTTCTTCT 59.796 38.462 17.23 0.00 0.00 2.85
103 104 6.768381 AGTGCTAGCTTTACTTTGTTCTTCTT 59.232 34.615 17.23 0.00 0.00 2.52
104 105 6.853362 GTGCTAGCTTTACTTTGTTCTTCTTG 59.147 38.462 17.23 0.00 0.00 3.02
105 106 6.017109 TGCTAGCTTTACTTTGTTCTTCTTGG 60.017 38.462 17.23 0.00 0.00 3.61
106 107 5.774498 AGCTTTACTTTGTTCTTCTTGGG 57.226 39.130 0.00 0.00 0.00 4.12
107 108 4.584743 AGCTTTACTTTGTTCTTCTTGGGG 59.415 41.667 0.00 0.00 0.00 4.96
108 109 4.262036 GCTTTACTTTGTTCTTCTTGGGGG 60.262 45.833 0.00 0.00 0.00 5.40
109 110 4.799715 TTACTTTGTTCTTCTTGGGGGA 57.200 40.909 0.00 0.00 0.00 4.81
110 111 3.903530 ACTTTGTTCTTCTTGGGGGAT 57.096 42.857 0.00 0.00 0.00 3.85
111 112 4.199002 ACTTTGTTCTTCTTGGGGGATT 57.801 40.909 0.00 0.00 0.00 3.01
112 113 4.556697 ACTTTGTTCTTCTTGGGGGATTT 58.443 39.130 0.00 0.00 0.00 2.17
113 114 4.588951 ACTTTGTTCTTCTTGGGGGATTTC 59.411 41.667 0.00 0.00 0.00 2.17
114 115 4.469469 TTGTTCTTCTTGGGGGATTTCT 57.531 40.909 0.00 0.00 0.00 2.52
115 116 4.469469 TGTTCTTCTTGGGGGATTTCTT 57.531 40.909 0.00 0.00 0.00 2.52
116 117 4.151883 TGTTCTTCTTGGGGGATTTCTTG 58.848 43.478 0.00 0.00 0.00 3.02
117 118 3.456380 TCTTCTTGGGGGATTTCTTGG 57.544 47.619 0.00 0.00 0.00 3.61
118 119 2.042979 TCTTCTTGGGGGATTTCTTGGG 59.957 50.000 0.00 0.00 0.00 4.12
119 120 1.766951 TCTTGGGGGATTTCTTGGGA 58.233 50.000 0.00 0.00 0.00 4.37
138 139 6.371809 TGGGATTCAAGTTACGAAATATGC 57.628 37.500 0.00 0.00 0.00 3.14
143 144 4.496360 TCAAGTTACGAAATATGCCGTCA 58.504 39.130 6.00 0.00 39.86 4.35
150 151 2.481276 CGAAATATGCCGTCACAGAGGA 60.481 50.000 0.00 0.00 0.00 3.71
159 160 3.866449 GCCGTCACAGAGGAGATTTCTTT 60.866 47.826 0.00 0.00 0.00 2.52
161 162 4.322349 CCGTCACAGAGGAGATTTCTTTCT 60.322 45.833 0.00 0.00 0.00 2.52
234 235 5.945784 TCACAAGGGAGATATTTGTTCTTGG 59.054 40.000 0.00 0.00 35.72 3.61
240 241 4.273318 GAGATATTTGTTCTTGGCTGGGT 58.727 43.478 0.00 0.00 0.00 4.51
244 245 3.990959 TTTGTTCTTGGCTGGGTTTTT 57.009 38.095 0.00 0.00 0.00 1.94
274 275 5.838521 TCTTCAAACAATAGCTTTTTCCCCT 59.161 36.000 0.00 0.00 0.00 4.79
278 279 4.783764 ACAATAGCTTTTTCCCCTTTCG 57.216 40.909 0.00 0.00 0.00 3.46
284 286 3.819337 AGCTTTTTCCCCTTTCGTTCTAC 59.181 43.478 0.00 0.00 0.00 2.59
291 293 5.038651 TCCCCTTTCGTTCTACTTTTCAA 57.961 39.130 0.00 0.00 0.00 2.69
331 333 5.538053 TGAATGTCCTTTCATTTTACAGCCA 59.462 36.000 0.00 0.00 38.03 4.75
344 346 0.322975 ACAGCCAGCAATCTCGTCTT 59.677 50.000 0.00 0.00 0.00 3.01
359 361 5.511363 TCTCGTCTTATTTTCTCCTCTCCT 58.489 41.667 0.00 0.00 0.00 3.69
360 362 5.358442 TCTCGTCTTATTTTCTCCTCTCCTG 59.642 44.000 0.00 0.00 0.00 3.86
407 409 4.832266 AGAGGAGGAACATGCTCTACATAG 59.168 45.833 8.56 0.00 45.10 2.23
425 427 5.572211 ACATAGTGTAGCGATGCATTTTTG 58.428 37.500 0.00 0.00 34.17 2.44
427 429 2.164219 AGTGTAGCGATGCATTTTTGGG 59.836 45.455 0.00 0.00 0.00 4.12
485 487 8.306680 TGTTTTACTTATACTGCTTGTCTCAC 57.693 34.615 0.00 0.00 0.00 3.51
519 554 5.880054 TTTATTACTCAGTTTGGAGCTGC 57.120 39.130 0.00 0.00 38.50 5.25
535 570 4.332268 GGAGCTGCAGAGTAAATCTTCTTG 59.668 45.833 20.43 0.00 35.47 3.02
536 571 5.157940 AGCTGCAGAGTAAATCTTCTTGA 57.842 39.130 20.43 0.00 35.47 3.02
537 572 5.177326 AGCTGCAGAGTAAATCTTCTTGAG 58.823 41.667 20.43 0.00 35.47 3.02
538 573 4.201802 GCTGCAGAGTAAATCTTCTTGAGC 60.202 45.833 20.43 0.00 35.47 4.26
539 574 4.898320 TGCAGAGTAAATCTTCTTGAGCA 58.102 39.130 0.00 0.00 35.47 4.26
540 575 4.934001 TGCAGAGTAAATCTTCTTGAGCAG 59.066 41.667 0.00 0.00 35.47 4.24
541 576 4.934602 GCAGAGTAAATCTTCTTGAGCAGT 59.065 41.667 0.00 0.00 35.47 4.40
542 577 5.411053 GCAGAGTAAATCTTCTTGAGCAGTT 59.589 40.000 0.00 0.00 35.47 3.16
543 578 6.072783 GCAGAGTAAATCTTCTTGAGCAGTTT 60.073 38.462 0.00 0.00 35.47 2.66
544 579 7.521261 GCAGAGTAAATCTTCTTGAGCAGTTTT 60.521 37.037 0.00 0.00 35.47 2.43
545 580 8.993121 CAGAGTAAATCTTCTTGAGCAGTTTTA 58.007 33.333 0.00 0.00 35.47 1.52
546 581 9.561069 AGAGTAAATCTTCTTGAGCAGTTTTAA 57.439 29.630 0.00 0.00 32.99 1.52
547 582 9.600646 GAGTAAATCTTCTTGAGCAGTTTTAAC 57.399 33.333 0.00 0.00 0.00 2.01
548 583 9.343539 AGTAAATCTTCTTGAGCAGTTTTAACT 57.656 29.630 0.00 0.00 40.60 2.24
549 584 9.600646 GTAAATCTTCTTGAGCAGTTTTAACTC 57.399 33.333 0.00 0.00 37.08 3.01
550 585 8.457238 AAATCTTCTTGAGCAGTTTTAACTCT 57.543 30.769 0.00 0.00 37.08 3.24
551 586 8.457238 AATCTTCTTGAGCAGTTTTAACTCTT 57.543 30.769 0.00 0.00 37.08 2.85
552 587 9.561069 AATCTTCTTGAGCAGTTTTAACTCTTA 57.439 29.630 0.00 0.00 37.08 2.10
553 588 8.366671 TCTTCTTGAGCAGTTTTAACTCTTAC 57.633 34.615 0.00 0.00 37.08 2.34
554 589 7.441458 TCTTCTTGAGCAGTTTTAACTCTTACC 59.559 37.037 0.00 0.00 37.08 2.85
555 590 6.827727 TCTTGAGCAGTTTTAACTCTTACCT 58.172 36.000 0.00 0.00 37.08 3.08
556 591 7.280356 TCTTGAGCAGTTTTAACTCTTACCTT 58.720 34.615 0.00 0.00 37.08 3.50
557 592 7.441458 TCTTGAGCAGTTTTAACTCTTACCTTC 59.559 37.037 0.00 0.00 37.08 3.46
558 593 6.827727 TGAGCAGTTTTAACTCTTACCTTCT 58.172 36.000 0.00 0.00 37.08 2.85
559 594 7.280356 TGAGCAGTTTTAACTCTTACCTTCTT 58.720 34.615 0.00 0.00 37.08 2.52
560 595 8.426489 TGAGCAGTTTTAACTCTTACCTTCTTA 58.574 33.333 0.00 0.00 37.08 2.10
561 596 8.604640 AGCAGTTTTAACTCTTACCTTCTTAC 57.395 34.615 0.00 0.00 37.08 2.34
562 597 7.660617 AGCAGTTTTAACTCTTACCTTCTTACC 59.339 37.037 0.00 0.00 37.08 2.85
563 598 7.660617 GCAGTTTTAACTCTTACCTTCTTACCT 59.339 37.037 0.00 0.00 37.08 3.08
564 599 9.205719 CAGTTTTAACTCTTACCTTCTTACCTC 57.794 37.037 0.00 0.00 37.08 3.85
565 600 8.931568 AGTTTTAACTCTTACCTTCTTACCTCA 58.068 33.333 0.00 0.00 32.86 3.86
566 601 8.986847 GTTTTAACTCTTACCTTCTTACCTCAC 58.013 37.037 0.00 0.00 0.00 3.51
567 602 7.844493 TTAACTCTTACCTTCTTACCTCACA 57.156 36.000 0.00 0.00 0.00 3.58
568 603 6.936968 AACTCTTACCTTCTTACCTCACAT 57.063 37.500 0.00 0.00 0.00 3.21
569 604 6.287589 ACTCTTACCTTCTTACCTCACATG 57.712 41.667 0.00 0.00 0.00 3.21
570 605 5.780793 ACTCTTACCTTCTTACCTCACATGT 59.219 40.000 0.00 0.00 0.00 3.21
571 606 6.952358 ACTCTTACCTTCTTACCTCACATGTA 59.048 38.462 0.00 0.00 0.00 2.29
572 607 7.453752 ACTCTTACCTTCTTACCTCACATGTAA 59.546 37.037 0.00 0.00 0.00 2.41
573 608 8.197592 TCTTACCTTCTTACCTCACATGTAAA 57.802 34.615 0.00 0.00 0.00 2.01
574 609 8.653191 TCTTACCTTCTTACCTCACATGTAAAA 58.347 33.333 0.00 0.00 0.00 1.52
575 610 9.280174 CTTACCTTCTTACCTCACATGTAAAAA 57.720 33.333 0.00 0.00 0.00 1.94
576 611 7.745620 ACCTTCTTACCTCACATGTAAAAAG 57.254 36.000 0.00 0.00 29.88 2.27
577 612 7.514721 ACCTTCTTACCTCACATGTAAAAAGA 58.485 34.615 0.00 1.33 31.07 2.52
578 613 7.661847 ACCTTCTTACCTCACATGTAAAAAGAG 59.338 37.037 0.00 0.05 31.07 2.85
582 617 3.356290 CCTCACATGTAAAAAGAGGGGG 58.644 50.000 17.52 1.25 41.65 5.40
583 618 3.245264 CCTCACATGTAAAAAGAGGGGGT 60.245 47.826 17.52 0.00 41.65 4.95
584 619 4.018779 CCTCACATGTAAAAAGAGGGGGTA 60.019 45.833 17.52 0.00 41.65 3.69
585 620 5.515886 CCTCACATGTAAAAAGAGGGGGTAA 60.516 44.000 17.52 0.00 41.65 2.85
586 621 5.566469 TCACATGTAAAAAGAGGGGGTAAG 58.434 41.667 0.00 0.00 0.00 2.34
587 622 4.705023 CACATGTAAAAAGAGGGGGTAAGG 59.295 45.833 0.00 0.00 0.00 2.69
588 623 4.604490 ACATGTAAAAAGAGGGGGTAAGGA 59.396 41.667 0.00 0.00 0.00 3.36
589 624 4.921644 TGTAAAAAGAGGGGGTAAGGAG 57.078 45.455 0.00 0.00 0.00 3.69
590 625 2.901338 AAAAAGAGGGGGTAAGGAGC 57.099 50.000 0.00 0.00 0.00 4.70
591 626 1.755200 AAAAGAGGGGGTAAGGAGCA 58.245 50.000 0.00 0.00 0.00 4.26
592 627 1.987080 AAAGAGGGGGTAAGGAGCAT 58.013 50.000 0.00 0.00 0.00 3.79
593 628 1.216990 AAGAGGGGGTAAGGAGCATG 58.783 55.000 0.00 0.00 0.00 4.06
594 629 0.044855 AGAGGGGGTAAGGAGCATGT 59.955 55.000 0.00 0.00 0.00 3.21
595 630 0.919710 GAGGGGGTAAGGAGCATGTT 59.080 55.000 0.00 0.00 0.00 2.71
596 631 2.124411 GAGGGGGTAAGGAGCATGTTA 58.876 52.381 0.00 0.00 0.00 2.41
597 632 2.508300 GAGGGGGTAAGGAGCATGTTAA 59.492 50.000 0.00 0.00 0.00 2.01
598 633 2.923629 AGGGGGTAAGGAGCATGTTAAA 59.076 45.455 0.00 0.00 0.00 1.52
599 634 3.335484 AGGGGGTAAGGAGCATGTTAAAA 59.665 43.478 0.00 0.00 0.00 1.52
600 635 4.016572 AGGGGGTAAGGAGCATGTTAAAAT 60.017 41.667 0.00 0.00 0.00 1.82
601 636 4.714802 GGGGGTAAGGAGCATGTTAAAATT 59.285 41.667 0.00 0.00 0.00 1.82
602 637 5.188948 GGGGGTAAGGAGCATGTTAAAATTT 59.811 40.000 0.00 0.00 0.00 1.82
603 638 6.106003 GGGGTAAGGAGCATGTTAAAATTTG 58.894 40.000 0.00 0.00 0.00 2.32
604 639 5.580691 GGGTAAGGAGCATGTTAAAATTTGC 59.419 40.000 0.00 0.00 35.34 3.68
605 640 5.580691 GGTAAGGAGCATGTTAAAATTTGCC 59.419 40.000 0.00 0.00 35.71 4.52
606 641 4.888326 AGGAGCATGTTAAAATTTGCCA 57.112 36.364 0.00 0.00 35.71 4.92
607 642 5.226194 AGGAGCATGTTAAAATTTGCCAA 57.774 34.783 0.00 0.00 35.71 4.52
608 643 5.807909 AGGAGCATGTTAAAATTTGCCAAT 58.192 33.333 0.00 0.00 35.71 3.16
609 644 5.876460 AGGAGCATGTTAAAATTTGCCAATC 59.124 36.000 0.00 0.00 35.71 2.67
610 645 5.876460 GGAGCATGTTAAAATTTGCCAATCT 59.124 36.000 0.00 0.00 35.71 2.40
611 646 6.372381 GGAGCATGTTAAAATTTGCCAATCTT 59.628 34.615 0.00 0.00 35.71 2.40
612 647 7.368480 AGCATGTTAAAATTTGCCAATCTTC 57.632 32.000 0.00 0.00 35.71 2.87
613 648 7.163441 AGCATGTTAAAATTTGCCAATCTTCT 58.837 30.769 0.00 0.00 35.71 2.85
614 649 7.662669 AGCATGTTAAAATTTGCCAATCTTCTT 59.337 29.630 0.00 0.00 35.71 2.52
615 650 8.291740 GCATGTTAAAATTTGCCAATCTTCTTT 58.708 29.630 0.00 0.00 0.00 2.52
646 681 4.942852 ACCATTTCTTTTGTCATCGCAAA 58.057 34.783 0.00 0.00 36.67 3.68
647 682 5.540911 ACCATTTCTTTTGTCATCGCAAAT 58.459 33.333 0.00 0.00 38.05 2.32
648 683 6.686630 ACCATTTCTTTTGTCATCGCAAATA 58.313 32.000 0.00 0.00 38.05 1.40
649 684 7.322664 ACCATTTCTTTTGTCATCGCAAATAT 58.677 30.769 0.00 0.00 38.05 1.28
650 685 7.818930 ACCATTTCTTTTGTCATCGCAAATATT 59.181 29.630 0.00 0.00 38.05 1.28
651 686 8.658609 CCATTTCTTTTGTCATCGCAAATATTT 58.341 29.630 0.00 0.00 38.05 1.40
652 687 9.467990 CATTTCTTTTGTCATCGCAAATATTTG 57.532 29.630 21.54 21.54 38.05 2.32
706 742 5.180117 ACTTACTGCTTCTAAACATGCACAG 59.820 40.000 0.00 0.00 0.00 3.66
782 857 4.978083 AGACCATTTCATCATTGCAGTC 57.022 40.909 0.00 0.00 0.00 3.51
787 862 5.047847 CCATTTCATCATTGCAGTCATTCC 58.952 41.667 0.00 0.00 0.00 3.01
851 926 8.115490 GCATATACTGCCCTTTATCTTTCATT 57.885 34.615 0.00 0.00 45.66 2.57
911 1020 9.271828 GGAATCAATTTGTTTCCTGTTTTGTAT 57.728 29.630 23.30 0.00 41.03 2.29
934 1154 9.450807 GTATGTACTATTCACCATTGCATTTTC 57.549 33.333 0.00 0.00 0.00 2.29
937 1157 9.237187 TGTACTATTCACCATTGCATTTTCTTA 57.763 29.630 0.00 0.00 0.00 2.10
938 1158 9.722056 GTACTATTCACCATTGCATTTTCTTAG 57.278 33.333 0.00 0.00 0.00 2.18
939 1159 8.579850 ACTATTCACCATTGCATTTTCTTAGA 57.420 30.769 0.00 0.00 0.00 2.10
940 1160 9.193806 ACTATTCACCATTGCATTTTCTTAGAT 57.806 29.630 0.00 0.00 0.00 1.98
1005 1226 2.306805 TGTCTGTTCAGCCAAGATGGAT 59.693 45.455 0.00 0.00 40.96 3.41
1007 1228 2.842496 TCTGTTCAGCCAAGATGGATCT 59.158 45.455 0.00 0.00 40.96 2.75
1041 1262 2.358737 GAGGAGTTGCCACCACCG 60.359 66.667 0.00 0.00 40.02 4.94
1073 1294 2.815211 CGACGTGGTGCCCATCAG 60.815 66.667 0.00 0.00 35.28 2.90
1312 1588 7.169982 GCTGATCTGGTGTTGTGTTATACTATC 59.830 40.741 1.46 0.00 0.00 2.08
1323 1599 7.534723 TGTGTTATACTATCATGGGTAGGTC 57.465 40.000 9.77 1.27 0.00 3.85
1327 1603 9.166222 TGTTATACTATCATGGGTAGGTCAATT 57.834 33.333 9.77 0.00 0.00 2.32
1357 1633 3.190874 GAGGATGATCAACCTGTCGTTC 58.809 50.000 27.66 9.75 36.57 3.95
1380 1656 2.993604 AGGGGATAGGGAGAAAGGTT 57.006 50.000 0.00 0.00 0.00 3.50
1516 1792 4.343814 TCACTGTAGTGTTGGAAGACATCA 59.656 41.667 11.44 0.00 45.76 3.07
1563 1842 1.414181 GACCTGCTTGCAGGCTATCTA 59.586 52.381 33.78 0.00 46.05 1.98
1700 2015 1.359474 AGAGAGTGAAGAGGCCCTACA 59.641 52.381 0.00 0.00 0.00 2.74
1979 2302 1.902508 CAGGGGCTGTCTTCTACTTCA 59.097 52.381 0.00 0.00 0.00 3.02
2370 2699 7.357859 CGTCCGACCATATTTACTTTCGATAAC 60.358 40.741 0.00 0.00 0.00 1.89
2371 2700 6.925165 TCCGACCATATTTACTTTCGATAACC 59.075 38.462 0.00 0.00 0.00 2.85
2387 2718 7.948034 TCGATAACCCTAATTTGGATGTTTT 57.052 32.000 7.57 0.00 0.00 2.43
2446 2777 7.836183 AGGATAAAAACCACTCATGCTAATTCT 59.164 33.333 0.00 0.00 0.00 2.40
2528 2860 7.606349 AGTTCCTTCTTGCCATTTTATTCTTC 58.394 34.615 0.00 0.00 0.00 2.87
2579 3344 4.527427 GGAAGGTGTCCTACTGTTTCTAGT 59.473 45.833 0.00 0.00 43.98 2.57
2616 3383 5.401550 TGCACTTTGCTGCTATTTATTGAC 58.598 37.500 0.00 0.00 45.31 3.18
2649 3416 7.704899 GTGTTTTGCATGTTTAACTAGGTTTCT 59.295 33.333 0.00 0.00 0.00 2.52
2661 3428 3.773119 ACTAGGTTTCTATTGAGGCGGAA 59.227 43.478 0.00 0.00 0.00 4.30
2750 3517 2.548920 GGCATAGAACTGCGCTATTCCT 60.549 50.000 9.73 1.96 43.23 3.36
2820 3590 2.943033 CTGTGGAGGTTCGTTTCAGTTT 59.057 45.455 0.00 0.00 0.00 2.66
2854 3625 4.706962 CACCTTTATCTTTTCCCCTTCTGG 59.293 45.833 0.00 0.00 0.00 3.86
2891 3662 3.134458 CTGAAGTCCTGGTGTGAACTTC 58.866 50.000 14.89 14.89 44.96 3.01
2909 3680 0.613260 TCTCGTATGGCCAGCTTTGT 59.387 50.000 13.05 0.00 0.00 2.83
2958 3729 3.799281 AAGATCTGTCTACTCTGCAGC 57.201 47.619 9.47 0.00 33.30 5.25
3046 3964 8.461222 TGTGAGTTATCATCTAAATTTTGGCTG 58.539 33.333 0.00 0.00 37.87 4.85
3047 3965 7.433425 GTGAGTTATCATCTAAATTTTGGCTGC 59.567 37.037 0.00 0.00 37.87 5.25
3048 3966 7.340232 TGAGTTATCATCTAAATTTTGGCTGCT 59.660 33.333 0.00 0.00 0.00 4.24
3049 3967 7.486647 AGTTATCATCTAAATTTTGGCTGCTG 58.513 34.615 0.00 0.00 0.00 4.41
3050 3968 5.927281 ATCATCTAAATTTTGGCTGCTGT 57.073 34.783 0.00 0.00 0.00 4.40
3051 3969 5.726980 TCATCTAAATTTTGGCTGCTGTT 57.273 34.783 0.00 0.00 0.00 3.16
3087 4005 6.239217 TGGCACTTATCTGATAGTTCATGT 57.761 37.500 0.00 0.00 0.00 3.21
3129 4055 6.033196 CACTTAAACGTACCAACTATGACTCG 59.967 42.308 0.00 0.00 0.00 4.18
3139 4065 0.681733 CTATGACTCGGACCCCATGG 59.318 60.000 4.14 4.14 37.80 3.66
3253 4185 0.870393 AGTTTGTCATGCTCGTGCTG 59.130 50.000 11.19 6.78 40.48 4.41
3263 4195 0.445436 GCTCGTGCTGGATGTTCTTG 59.555 55.000 1.41 0.00 36.03 3.02
3273 4208 5.711506 TGCTGGATGTTCTTGTGAATGTATT 59.288 36.000 0.00 0.00 34.40 1.89
3385 4323 9.508567 GGTCAGCATATTTTCTTTTAATGAGAC 57.491 33.333 0.00 0.00 0.00 3.36
3702 4654 1.002868 GGCAAGAAGAGCTCCTGCA 60.003 57.895 21.94 0.00 42.46 4.41
3772 4724 0.193574 AGACCCCAAGTTCCTCCTGA 59.806 55.000 0.00 0.00 0.00 3.86
4060 5147 7.158697 ACTGTATTTGTTGACTGCTGTGTATA 58.841 34.615 0.00 0.00 0.00 1.47
4062 5149 4.983215 TTTGTTGACTGCTGTGTATACG 57.017 40.909 0.00 0.00 0.00 3.06
4063 5150 2.333926 TGTTGACTGCTGTGTATACGC 58.666 47.619 9.55 9.55 0.00 4.42
4064 5151 2.029380 TGTTGACTGCTGTGTATACGCT 60.029 45.455 16.94 0.00 0.00 5.07
4065 5152 3.191791 TGTTGACTGCTGTGTATACGCTA 59.808 43.478 16.94 3.66 0.00 4.26
4082 5172 4.069304 ACGCTAATGGCTGTTGTCTTTTA 58.931 39.130 0.00 0.00 39.13 1.52
4195 5285 3.244700 GCCTACTATCATCTTGGGCATGT 60.245 47.826 0.00 0.00 38.16 3.21
4368 6210 4.086457 TGGCTTTGGATTTCCTTTAGGTC 58.914 43.478 0.00 0.00 36.82 3.85
4595 6449 9.533253 TTATACTTTATTGCGTACTTCCCTAAC 57.467 33.333 0.00 0.00 0.00 2.34
4827 7556 3.305720 TCGTGCTAATTCTAGGGATGGT 58.694 45.455 0.00 0.00 0.00 3.55
5137 7957 6.200665 TGTCACATAAACTTGCAATTTTCTGC 59.799 34.615 20.44 10.21 42.95 4.26
5392 8217 4.229096 CAACACATTACCATGTTCTGCAC 58.771 43.478 0.00 0.00 41.16 4.57
5395 8220 2.742053 ACATTACCATGTTCTGCACGAC 59.258 45.455 0.00 0.00 41.16 4.34
5589 8414 2.169352 AGAGGAGCACAACAGCGATATT 59.831 45.455 0.00 0.00 40.15 1.28
5616 8496 3.307242 GGTATGTGCGACTCATTGTCTTC 59.693 47.826 0.00 0.00 43.25 2.87
5634 8514 4.094887 GTCTTCGCTTGGCAAATAATGAGA 59.905 41.667 0.00 0.00 0.00 3.27
5828 8774 3.760151 CTCCATGTTTTTCTGCTGATCCA 59.240 43.478 0.00 0.00 0.00 3.41
5831 8777 4.380233 CCATGTTTTTCTGCTGATCCACTC 60.380 45.833 0.00 0.00 0.00 3.51
5832 8778 4.090761 TGTTTTTCTGCTGATCCACTCT 57.909 40.909 0.00 0.00 0.00 3.24
5835 8781 4.356405 TTTTCTGCTGATCCACTCTTGA 57.644 40.909 0.00 0.00 0.00 3.02
5857 8803 1.946984 CTGGGGGTAGTGGTGAACTA 58.053 55.000 0.00 0.00 40.56 2.24
5916 8867 8.682936 ATCTAAATAAATAGCACCTGGAACTG 57.317 34.615 0.00 0.00 0.00 3.16
5993 8961 3.402095 TTGGCGTCGAACCAACCCA 62.402 57.895 15.36 0.82 42.23 4.51
6038 9006 4.550076 ACTAGGCTTGGAGATGATATGC 57.450 45.455 0.00 0.00 0.00 3.14
6042 9010 1.802960 GCTTGGAGATGATATGCGTGG 59.197 52.381 0.00 0.00 0.00 4.94
6124 9097 4.935702 TCTTTCTTTGCAGTTGTGAATGG 58.064 39.130 0.00 0.00 0.00 3.16
6160 9133 4.502259 GCTGTCGAATTCTATGGATGGAGT 60.502 45.833 3.52 0.00 0.00 3.85
6196 9169 3.826729 GGTTTGCAGGTGGAGATAGTTTT 59.173 43.478 0.00 0.00 0.00 2.43
6242 10090 1.732259 GCTTCAGTTCGTACCATGTGG 59.268 52.381 0.00 0.00 42.17 4.17
6270 10118 5.055812 CCTCTAACAATCTCCAGCTTCATC 58.944 45.833 0.00 0.00 0.00 2.92
6275 10123 4.597004 ACAATCTCCAGCTTCATCACATT 58.403 39.130 0.00 0.00 0.00 2.71
6278 10126 4.824479 TCTCCAGCTTCATCACATTACA 57.176 40.909 0.00 0.00 0.00 2.41
6279 10127 5.164620 TCTCCAGCTTCATCACATTACAA 57.835 39.130 0.00 0.00 0.00 2.41
6280 10128 5.559770 TCTCCAGCTTCATCACATTACAAA 58.440 37.500 0.00 0.00 0.00 2.83
6281 10129 6.182627 TCTCCAGCTTCATCACATTACAAAT 58.817 36.000 0.00 0.00 0.00 2.32
6282 10130 6.660521 TCTCCAGCTTCATCACATTACAAATT 59.339 34.615 0.00 0.00 0.00 1.82
6283 10131 6.623486 TCCAGCTTCATCACATTACAAATTG 58.377 36.000 0.00 0.00 0.00 2.32
6284 10132 6.433716 TCCAGCTTCATCACATTACAAATTGA 59.566 34.615 0.00 0.00 0.00 2.57
6285 10133 6.750501 CCAGCTTCATCACATTACAAATTGAG 59.249 38.462 0.00 0.00 0.00 3.02
6286 10134 7.362315 CCAGCTTCATCACATTACAAATTGAGA 60.362 37.037 0.00 0.00 0.00 3.27
6287 10135 8.024865 CAGCTTCATCACATTACAAATTGAGAA 58.975 33.333 0.00 0.00 0.00 2.87
6288 10136 8.579006 AGCTTCATCACATTACAAATTGAGAAA 58.421 29.630 0.00 0.00 0.00 2.52
6289 10137 9.195411 GCTTCATCACATTACAAATTGAGAAAA 57.805 29.630 0.00 0.00 0.00 2.29
6292 10140 9.142515 TCATCACATTACAAATTGAGAAAATGC 57.857 29.630 0.00 0.00 0.00 3.56
6293 10141 9.146984 CATCACATTACAAATTGAGAAAATGCT 57.853 29.630 0.00 0.00 0.00 3.79
6294 10142 9.715121 ATCACATTACAAATTGAGAAAATGCTT 57.285 25.926 0.00 0.00 0.00 3.91
6295 10143 9.195411 TCACATTACAAATTGAGAAAATGCTTC 57.805 29.630 0.00 0.00 0.00 3.86
6296 10144 8.980610 CACATTACAAATTGAGAAAATGCTTCA 58.019 29.630 0.00 0.00 0.00 3.02
6297 10145 8.981647 ACATTACAAATTGAGAAAATGCTTCAC 58.018 29.630 0.00 0.00 0.00 3.18
6298 10146 7.945033 TTACAAATTGAGAAAATGCTTCACC 57.055 32.000 0.00 0.00 0.00 4.02
6299 10147 5.299949 ACAAATTGAGAAAATGCTTCACCC 58.700 37.500 0.00 0.00 0.00 4.61
6300 10148 3.855689 ATTGAGAAAATGCTTCACCCG 57.144 42.857 0.00 0.00 0.00 5.28
6301 10149 0.881118 TGAGAAAATGCTTCACCCGC 59.119 50.000 0.00 0.00 0.00 6.13
6302 10150 0.881118 GAGAAAATGCTTCACCCGCA 59.119 50.000 0.00 0.00 42.25 5.69
6303 10151 1.269448 GAGAAAATGCTTCACCCGCAA 59.731 47.619 0.00 0.00 41.26 4.85
6304 10152 1.686052 AGAAAATGCTTCACCCGCAAA 59.314 42.857 0.00 0.00 41.26 3.68
6305 10153 2.102252 AGAAAATGCTTCACCCGCAAAA 59.898 40.909 0.00 0.00 41.26 2.44
6306 10154 2.611225 AAATGCTTCACCCGCAAAAA 57.389 40.000 0.00 0.00 41.26 1.94
6307 10155 2.837532 AATGCTTCACCCGCAAAAAT 57.162 40.000 0.00 0.00 41.26 1.82
6308 10156 2.083167 ATGCTTCACCCGCAAAAATG 57.917 45.000 0.00 0.00 41.26 2.32
6309 10157 1.035923 TGCTTCACCCGCAAAAATGA 58.964 45.000 0.00 0.00 33.87 2.57
6310 10158 1.410517 TGCTTCACCCGCAAAAATGAA 59.589 42.857 0.00 0.00 33.87 2.57
6311 10159 2.159043 TGCTTCACCCGCAAAAATGAAA 60.159 40.909 0.00 0.00 33.87 2.69
6312 10160 2.869192 GCTTCACCCGCAAAAATGAAAA 59.131 40.909 0.00 0.00 31.00 2.29
6313 10161 3.311048 GCTTCACCCGCAAAAATGAAAAA 59.689 39.130 0.00 0.00 31.00 1.94
6338 10186 2.037901 TGAGAAAATGCTGGGCAAACA 58.962 42.857 0.00 0.00 43.62 2.83
6339 10187 2.633967 TGAGAAAATGCTGGGCAAACAT 59.366 40.909 0.00 0.00 43.62 2.71
6372 10220 8.012957 ACAATAATTGTCCAGAGTAGAGTAGG 57.987 38.462 0.00 0.00 40.56 3.18
6375 10223 3.935818 TGTCCAGAGTAGAGTAGGAGG 57.064 52.381 0.00 0.00 0.00 4.30
6376 10224 2.510382 TGTCCAGAGTAGAGTAGGAGGG 59.490 54.545 0.00 0.00 0.00 4.30
6380 10228 2.510382 CAGAGTAGAGTAGGAGGGACCA 59.490 54.545 0.00 0.00 42.04 4.02
6409 10257 3.099267 ACTAGCTATGCAAACGCCTAG 57.901 47.619 0.00 0.00 32.52 3.02
6410 10258 2.693591 ACTAGCTATGCAAACGCCTAGA 59.306 45.455 13.60 0.00 31.37 2.43
6411 10259 2.231215 AGCTATGCAAACGCCTAGAG 57.769 50.000 0.00 0.00 31.37 2.43
6412 10260 0.583917 GCTATGCAAACGCCTAGAGC 59.416 55.000 0.00 0.00 31.37 4.09
6413 10261 1.221414 CTATGCAAACGCCTAGAGCC 58.779 55.000 0.00 0.00 38.78 4.70
6414 10262 0.179056 TATGCAAACGCCTAGAGCCC 60.179 55.000 0.00 0.00 38.78 5.19
6415 10263 2.824489 GCAAACGCCTAGAGCCCC 60.824 66.667 0.00 0.00 38.78 5.80
6416 10264 2.124695 CAAACGCCTAGAGCCCCC 60.125 66.667 0.00 0.00 38.78 5.40
6417 10265 2.285442 AAACGCCTAGAGCCCCCT 60.285 61.111 0.00 0.00 38.78 4.79
6418 10266 2.670148 AAACGCCTAGAGCCCCCTG 61.670 63.158 0.00 0.00 38.78 4.45
6430 10278 1.780503 GCCCCCTGCTTATGATTTGT 58.219 50.000 0.00 0.00 36.87 2.83
6431 10279 2.110578 GCCCCCTGCTTATGATTTGTT 58.889 47.619 0.00 0.00 36.87 2.83
6432 10280 2.159057 GCCCCCTGCTTATGATTTGTTG 60.159 50.000 0.00 0.00 36.87 3.33
6433 10281 3.099141 CCCCCTGCTTATGATTTGTTGT 58.901 45.455 0.00 0.00 0.00 3.32
6434 10282 3.515104 CCCCCTGCTTATGATTTGTTGTT 59.485 43.478 0.00 0.00 0.00 2.83
6435 10283 4.020307 CCCCCTGCTTATGATTTGTTGTTT 60.020 41.667 0.00 0.00 0.00 2.83
6436 10284 5.186797 CCCCCTGCTTATGATTTGTTGTTTA 59.813 40.000 0.00 0.00 0.00 2.01
6437 10285 6.127083 CCCCCTGCTTATGATTTGTTGTTTAT 60.127 38.462 0.00 0.00 0.00 1.40
6438 10286 6.980397 CCCCTGCTTATGATTTGTTGTTTATC 59.020 38.462 0.00 0.00 0.00 1.75
6439 10287 7.147846 CCCCTGCTTATGATTTGTTGTTTATCT 60.148 37.037 0.00 0.00 0.00 1.98
6440 10288 8.902806 CCCTGCTTATGATTTGTTGTTTATCTA 58.097 33.333 0.00 0.00 0.00 1.98
6452 10300 9.757227 TTTGTTGTTTATCTAAATTTGGACCTG 57.243 29.630 6.37 0.00 0.00 4.00
6453 10301 8.472007 TGTTGTTTATCTAAATTTGGACCTGT 57.528 30.769 6.37 0.00 0.00 4.00
6454 10302 8.919145 TGTTGTTTATCTAAATTTGGACCTGTT 58.081 29.630 6.37 0.00 0.00 3.16
6455 10303 9.758651 GTTGTTTATCTAAATTTGGACCTGTTT 57.241 29.630 6.37 0.00 0.00 2.83
6460 10308 7.961326 ATCTAAATTTGGACCTGTTTATGCT 57.039 32.000 6.37 0.00 0.00 3.79
6461 10309 7.156876 TCTAAATTTGGACCTGTTTATGCTG 57.843 36.000 0.00 0.00 0.00 4.41
6462 10310 3.874392 ATTTGGACCTGTTTATGCTGC 57.126 42.857 0.00 0.00 0.00 5.25
6463 10311 2.584835 TTGGACCTGTTTATGCTGCT 57.415 45.000 0.00 0.00 0.00 4.24
6464 10312 1.825090 TGGACCTGTTTATGCTGCTG 58.175 50.000 0.00 0.00 0.00 4.41
6465 10313 1.098050 GGACCTGTTTATGCTGCTGG 58.902 55.000 0.00 0.00 0.00 4.85
6466 10314 1.098050 GACCTGTTTATGCTGCTGGG 58.902 55.000 0.00 0.00 0.00 4.45
6467 10315 0.405585 ACCTGTTTATGCTGCTGGGT 59.594 50.000 0.00 0.00 0.00 4.51
6468 10316 0.813184 CCTGTTTATGCTGCTGGGTG 59.187 55.000 0.00 0.00 0.00 4.61
6469 10317 0.813184 CTGTTTATGCTGCTGGGTGG 59.187 55.000 0.00 0.00 0.00 4.61
6470 10318 0.403655 TGTTTATGCTGCTGGGTGGA 59.596 50.000 0.00 0.00 0.00 4.02
6471 10319 1.098050 GTTTATGCTGCTGGGTGGAG 58.902 55.000 0.00 0.00 37.17 3.86
6472 10320 0.698238 TTTATGCTGCTGGGTGGAGT 59.302 50.000 0.00 0.00 36.43 3.85
6473 10321 1.578897 TTATGCTGCTGGGTGGAGTA 58.421 50.000 0.00 0.00 36.43 2.59
6474 10322 1.123077 TATGCTGCTGGGTGGAGTAG 58.877 55.000 0.00 0.00 36.43 2.57
6475 10323 2.124942 GCTGCTGGGTGGAGTAGC 60.125 66.667 0.00 0.00 43.22 3.58
6476 10324 3.689002 GCTGCTGGGTGGAGTAGCC 62.689 68.421 0.00 0.00 43.67 3.93
6477 10325 3.009115 TGCTGGGTGGAGTAGCCC 61.009 66.667 0.00 0.00 46.65 5.19
6478 10326 3.798511 GCTGGGTGGAGTAGCCCC 61.799 72.222 0.00 0.00 46.65 5.80
6479 10327 3.090532 CTGGGTGGAGTAGCCCCC 61.091 72.222 0.00 0.00 46.65 5.40
6480 10328 3.622263 TGGGTGGAGTAGCCCCCT 61.622 66.667 0.00 0.00 46.65 4.79
6481 10329 3.090532 GGGTGGAGTAGCCCCCTG 61.091 72.222 0.00 0.00 41.50 4.45
6482 10330 3.798511 GGTGGAGTAGCCCCCTGC 61.799 72.222 0.00 0.00 41.71 4.85
6492 10340 3.176728 GCCCCCTGCTTTAGAGTTC 57.823 57.895 0.00 0.00 36.87 3.01
6493 10341 0.744771 GCCCCCTGCTTTAGAGTTCG 60.745 60.000 0.00 0.00 36.87 3.95
6494 10342 0.744771 CCCCCTGCTTTAGAGTTCGC 60.745 60.000 0.00 0.00 0.00 4.70
6495 10343 0.250513 CCCCTGCTTTAGAGTTCGCT 59.749 55.000 0.00 0.00 0.00 4.93
6496 10344 1.363744 CCCTGCTTTAGAGTTCGCTG 58.636 55.000 0.00 0.00 0.00 5.18
6497 10345 1.363744 CCTGCTTTAGAGTTCGCTGG 58.636 55.000 0.00 0.00 35.63 4.85
6498 10346 1.338200 CCTGCTTTAGAGTTCGCTGGT 60.338 52.381 0.00 0.00 36.92 4.00
6499 10347 2.094182 CCTGCTTTAGAGTTCGCTGGTA 60.094 50.000 0.00 0.00 36.92 3.25
6500 10348 3.430929 CCTGCTTTAGAGTTCGCTGGTAT 60.431 47.826 0.00 0.00 36.92 2.73
6501 10349 3.521560 TGCTTTAGAGTTCGCTGGTATG 58.478 45.455 0.00 0.00 0.00 2.39
6502 10350 3.056107 TGCTTTAGAGTTCGCTGGTATGT 60.056 43.478 0.00 0.00 0.00 2.29
6503 10351 3.552294 GCTTTAGAGTTCGCTGGTATGTC 59.448 47.826 0.00 0.00 0.00 3.06
6504 10352 3.416119 TTAGAGTTCGCTGGTATGTCG 57.584 47.619 0.00 0.00 0.00 4.35
6505 10353 1.174783 AGAGTTCGCTGGTATGTCGT 58.825 50.000 0.00 0.00 0.00 4.34
6506 10354 1.544691 AGAGTTCGCTGGTATGTCGTT 59.455 47.619 0.00 0.00 0.00 3.85
6507 10355 1.654105 GAGTTCGCTGGTATGTCGTTG 59.346 52.381 0.00 0.00 0.00 4.10
6508 10356 1.000506 AGTTCGCTGGTATGTCGTTGT 59.999 47.619 0.00 0.00 0.00 3.32
6509 10357 1.126113 GTTCGCTGGTATGTCGTTGTG 59.874 52.381 0.00 0.00 0.00 3.33
6510 10358 0.389296 TCGCTGGTATGTCGTTGTGG 60.389 55.000 0.00 0.00 0.00 4.17
6511 10359 0.669318 CGCTGGTATGTCGTTGTGGT 60.669 55.000 0.00 0.00 0.00 4.16
6512 10360 1.403116 CGCTGGTATGTCGTTGTGGTA 60.403 52.381 0.00 0.00 0.00 3.25
6513 10361 1.997606 GCTGGTATGTCGTTGTGGTAC 59.002 52.381 0.00 0.00 0.00 3.34
6514 10362 2.353406 GCTGGTATGTCGTTGTGGTACT 60.353 50.000 0.00 0.00 0.00 2.73
6515 10363 3.508762 CTGGTATGTCGTTGTGGTACTC 58.491 50.000 0.00 0.00 0.00 2.59
6516 10364 2.095110 TGGTATGTCGTTGTGGTACTCG 60.095 50.000 0.00 0.00 0.00 4.18
6517 10365 2.095059 GGTATGTCGTTGTGGTACTCGT 60.095 50.000 0.00 0.00 0.00 4.18
6518 10366 2.060326 ATGTCGTTGTGGTACTCGTG 57.940 50.000 0.00 0.00 0.00 4.35
6519 10367 0.031043 TGTCGTTGTGGTACTCGTGG 59.969 55.000 0.00 0.00 0.00 4.94
6520 10368 0.665369 GTCGTTGTGGTACTCGTGGG 60.665 60.000 0.00 0.00 0.00 4.61
6521 10369 2.025418 CGTTGTGGTACTCGTGGGC 61.025 63.158 0.00 0.00 0.00 5.36
6522 10370 1.370064 GTTGTGGTACTCGTGGGCT 59.630 57.895 0.00 0.00 0.00 5.19
6523 10371 0.250166 GTTGTGGTACTCGTGGGCTT 60.250 55.000 0.00 0.00 0.00 4.35
6524 10372 0.034337 TTGTGGTACTCGTGGGCTTC 59.966 55.000 0.00 0.00 0.00 3.86
6525 10373 0.830444 TGTGGTACTCGTGGGCTTCT 60.830 55.000 0.00 0.00 0.00 2.85
6526 10374 1.180029 GTGGTACTCGTGGGCTTCTA 58.820 55.000 0.00 0.00 0.00 2.10
6527 10375 1.755380 GTGGTACTCGTGGGCTTCTAT 59.245 52.381 0.00 0.00 0.00 1.98
6528 10376 2.167900 GTGGTACTCGTGGGCTTCTATT 59.832 50.000 0.00 0.00 0.00 1.73
6529 10377 2.835764 TGGTACTCGTGGGCTTCTATTT 59.164 45.455 0.00 0.00 0.00 1.40
6530 10378 3.118884 TGGTACTCGTGGGCTTCTATTTC 60.119 47.826 0.00 0.00 0.00 2.17
6531 10379 3.132467 GGTACTCGTGGGCTTCTATTTCT 59.868 47.826 0.00 0.00 0.00 2.52
6532 10380 3.528597 ACTCGTGGGCTTCTATTTCTC 57.471 47.619 0.00 0.00 0.00 2.87
6533 10381 2.832129 ACTCGTGGGCTTCTATTTCTCA 59.168 45.455 0.00 0.00 0.00 3.27
6534 10382 3.260884 ACTCGTGGGCTTCTATTTCTCAA 59.739 43.478 0.00 0.00 0.00 3.02
6535 10383 4.080863 ACTCGTGGGCTTCTATTTCTCAAT 60.081 41.667 0.00 0.00 0.00 2.57
6536 10384 4.191544 TCGTGGGCTTCTATTTCTCAATG 58.808 43.478 0.00 0.00 0.00 2.82
6537 10385 4.081142 TCGTGGGCTTCTATTTCTCAATGA 60.081 41.667 0.00 0.00 0.00 2.57
6538 10386 4.635765 CGTGGGCTTCTATTTCTCAATGAA 59.364 41.667 0.00 0.00 0.00 2.57
6549 10397 5.804944 TTTCTCAATGAAATTTGGAGCCA 57.195 34.783 0.00 0.00 39.50 4.75
6550 10398 5.395682 TTCTCAATGAAATTTGGAGCCAG 57.604 39.130 0.00 0.00 31.22 4.85
6551 10399 3.765511 TCTCAATGAAATTTGGAGCCAGG 59.234 43.478 0.00 0.00 31.22 4.45
6552 10400 2.833338 TCAATGAAATTTGGAGCCAGGG 59.167 45.455 0.00 0.00 31.22 4.45
6553 10401 1.870064 ATGAAATTTGGAGCCAGGGG 58.130 50.000 0.00 0.00 0.00 4.79
6554 10402 0.252193 TGAAATTTGGAGCCAGGGGG 60.252 55.000 0.00 0.00 37.18 5.40
6555 10403 0.041090 GAAATTTGGAGCCAGGGGGA 59.959 55.000 0.00 0.00 35.59 4.81
6556 10404 0.041684 AAATTTGGAGCCAGGGGGAG 59.958 55.000 0.00 0.00 35.59 4.30
6557 10405 1.878799 AATTTGGAGCCAGGGGGAGG 61.879 60.000 0.00 0.00 35.59 4.30
6571 10419 1.679898 GGAGGCCCCTGATTATCGG 59.320 63.158 0.00 0.00 0.00 4.18
6572 10420 1.679898 GAGGCCCCTGATTATCGGG 59.320 63.158 12.98 12.98 42.66 5.14
6573 10421 0.836400 GAGGCCCCTGATTATCGGGA 60.836 60.000 20.90 0.00 45.95 5.14
6574 10422 0.401395 AGGCCCCTGATTATCGGGAA 60.401 55.000 20.90 0.00 45.95 3.97
6575 10423 0.476771 GGCCCCTGATTATCGGGAAA 59.523 55.000 20.90 0.00 45.95 3.13
6576 10424 1.133606 GGCCCCTGATTATCGGGAAAA 60.134 52.381 20.90 0.00 45.95 2.29
6577 10425 2.661718 GCCCCTGATTATCGGGAAAAA 58.338 47.619 20.90 0.00 45.95 1.94
6613 10461 2.029623 CAGCAGCAGGAGCCAAATAAT 58.970 47.619 0.00 0.00 43.56 1.28
6626 10474 4.162131 AGCCAAATAATCAACCAATCCCAC 59.838 41.667 0.00 0.00 0.00 4.61
6699 10547 3.689347 TCAGCAGTACAATGAGGCATTT 58.311 40.909 0.00 0.00 31.05 2.32
6700 10548 3.691118 TCAGCAGTACAATGAGGCATTTC 59.309 43.478 0.00 0.00 31.05 2.17
6701 10549 2.679837 AGCAGTACAATGAGGCATTTCG 59.320 45.455 0.00 0.00 31.05 3.46
6702 10550 2.792542 GCAGTACAATGAGGCATTTCGC 60.793 50.000 0.00 0.00 41.28 4.70
6703 10551 2.679837 CAGTACAATGAGGCATTTCGCT 59.320 45.455 0.00 0.00 41.91 4.93
6705 10553 0.813184 ACAATGAGGCATTTCGCTGG 59.187 50.000 0.00 0.00 41.91 4.85
6706 10554 0.526954 CAATGAGGCATTTCGCTGGC 60.527 55.000 0.00 0.00 41.91 4.85
6710 10558 4.173971 GGCATTTCGCTGGCTTTG 57.826 55.556 0.00 0.00 41.91 2.77
6755 10614 3.057033 TCTTGTACTTGTAGAGGTTCGCC 60.057 47.826 0.00 0.00 37.60 5.54
6777 10636 2.808315 CCAGCCTCGCGTATCACT 59.192 61.111 5.77 0.00 0.00 3.41
6787 10646 1.495878 GCGTATCACTCCATGCTGAG 58.504 55.000 0.00 0.00 38.37 3.35
6815 10675 4.129737 ACGGCCGTGATCGTCAGG 62.130 66.667 33.75 0.00 34.20 3.86
6818 10678 4.451150 GCCGTGATCGTCAGGCCA 62.451 66.667 5.01 0.00 43.54 5.36
6819 10679 2.509336 CCGTGATCGTCAGGCCAC 60.509 66.667 5.01 0.00 31.43 5.01
6820 10680 2.509336 CGTGATCGTCAGGCCACC 60.509 66.667 5.01 0.00 0.00 4.61
6821 10681 2.125106 GTGATCGTCAGGCCACCC 60.125 66.667 5.01 0.00 0.00 4.61
6822 10682 2.606213 TGATCGTCAGGCCACCCA 60.606 61.111 5.01 0.00 0.00 4.51
6823 10683 2.125106 GATCGTCAGGCCACCCAC 60.125 66.667 5.01 0.00 0.00 4.61
6824 10684 3.682292 GATCGTCAGGCCACCCACC 62.682 68.421 5.01 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 5.931441 AGAACAAAGTAAAGCTAGCACTG 57.069 39.130 18.83 4.59 0.00 3.66
81 82 6.374578 CCAAGAAGAACAAAGTAAAGCTAGC 58.625 40.000 6.62 6.62 0.00 3.42
91 92 4.835056 AGAAATCCCCCAAGAAGAACAAAG 59.165 41.667 0.00 0.00 0.00 2.77
96 97 3.502119 CCCAAGAAATCCCCCAAGAAGAA 60.502 47.826 0.00 0.00 0.00 2.52
97 98 2.042979 CCCAAGAAATCCCCCAAGAAGA 59.957 50.000 0.00 0.00 0.00 2.87
98 99 2.042979 TCCCAAGAAATCCCCCAAGAAG 59.957 50.000 0.00 0.00 0.00 2.85
99 100 2.077803 TCCCAAGAAATCCCCCAAGAA 58.922 47.619 0.00 0.00 0.00 2.52
100 101 1.766951 TCCCAAGAAATCCCCCAAGA 58.233 50.000 0.00 0.00 0.00 3.02
101 102 2.854736 ATCCCAAGAAATCCCCCAAG 57.145 50.000 0.00 0.00 0.00 3.61
102 103 2.385069 TGAATCCCAAGAAATCCCCCAA 59.615 45.455 0.00 0.00 0.00 4.12
103 104 2.006873 TGAATCCCAAGAAATCCCCCA 58.993 47.619 0.00 0.00 0.00 4.96
104 105 2.846665 TGAATCCCAAGAAATCCCCC 57.153 50.000 0.00 0.00 0.00 5.40
114 115 6.183360 GGCATATTTCGTAACTTGAATCCCAA 60.183 38.462 0.00 0.00 0.00 4.12
115 116 5.298276 GGCATATTTCGTAACTTGAATCCCA 59.702 40.000 0.00 0.00 0.00 4.37
116 117 5.560183 CGGCATATTTCGTAACTTGAATCCC 60.560 44.000 0.00 0.00 0.00 3.85
117 118 5.007332 ACGGCATATTTCGTAACTTGAATCC 59.993 40.000 0.00 0.00 37.88 3.01
118 119 6.044512 ACGGCATATTTCGTAACTTGAATC 57.955 37.500 0.00 0.00 37.88 2.52
119 120 5.583061 TGACGGCATATTTCGTAACTTGAAT 59.417 36.000 0.00 0.00 39.88 2.57
138 139 3.601443 AAGAAATCTCCTCTGTGACGG 57.399 47.619 0.00 0.00 0.00 4.79
143 144 5.832539 TCCAAGAAAGAAATCTCCTCTGT 57.167 39.130 0.00 0.00 0.00 3.41
212 213 4.706962 GCCAAGAACAAATATCTCCCTTGT 59.293 41.667 0.00 0.00 34.81 3.16
257 258 4.149598 ACGAAAGGGGAAAAAGCTATTGT 58.850 39.130 0.00 0.00 0.00 2.71
263 264 3.819337 AGTAGAACGAAAGGGGAAAAAGC 59.181 43.478 0.00 0.00 0.00 3.51
264 265 6.387041 AAAGTAGAACGAAAGGGGAAAAAG 57.613 37.500 0.00 0.00 0.00 2.27
268 269 5.038651 TGAAAAGTAGAACGAAAGGGGAA 57.961 39.130 0.00 0.00 0.00 3.97
270 271 5.959618 ATTGAAAAGTAGAACGAAAGGGG 57.040 39.130 0.00 0.00 0.00 4.79
274 275 7.935210 ACCCTAGAATTGAAAAGTAGAACGAAA 59.065 33.333 0.00 0.00 0.00 3.46
278 279 8.617290 TGAACCCTAGAATTGAAAAGTAGAAC 57.383 34.615 0.00 0.00 0.00 3.01
284 286 7.885297 TCACATTGAACCCTAGAATTGAAAAG 58.115 34.615 0.00 0.00 0.00 2.27
291 293 5.888161 GGACATTCACATTGAACCCTAGAAT 59.112 40.000 0.00 0.00 39.45 2.40
331 333 5.983540 AGGAGAAAATAAGACGAGATTGCT 58.016 37.500 0.00 0.00 0.00 3.91
376 378 5.679601 AGCATGTTCCTCCTCTCTTATTTC 58.320 41.667 0.00 0.00 0.00 2.17
384 386 3.107402 TGTAGAGCATGTTCCTCCTCT 57.893 47.619 5.87 4.85 38.20 3.69
407 409 2.529151 CCCAAAAATGCATCGCTACAC 58.471 47.619 0.00 0.00 0.00 2.90
427 429 5.308237 AGAGTCCTATGACATATGAAACCCC 59.692 44.000 10.38 0.00 44.33 4.95
431 433 6.484364 TGCAGAGTCCTATGACATATGAAA 57.516 37.500 10.38 0.00 44.33 2.69
432 434 6.484364 TTGCAGAGTCCTATGACATATGAA 57.516 37.500 10.38 0.00 44.33 2.57
441 443 4.669206 ACAGAGATTGCAGAGTCCTATG 57.331 45.455 0.00 0.00 0.00 2.23
519 554 7.432350 AAACTGCTCAAGAAGATTTACTCTG 57.568 36.000 0.00 0.00 33.29 3.35
535 570 7.731882 AAGAAGGTAAGAGTTAAAACTGCTC 57.268 36.000 0.00 0.00 39.88 4.26
536 571 7.660617 GGTAAGAAGGTAAGAGTTAAAACTGCT 59.339 37.037 0.00 0.00 39.88 4.24
537 572 7.660617 AGGTAAGAAGGTAAGAGTTAAAACTGC 59.339 37.037 0.00 0.00 39.88 4.40
538 573 9.205719 GAGGTAAGAAGGTAAGAGTTAAAACTG 57.794 37.037 0.00 0.00 39.88 3.16
539 574 8.931568 TGAGGTAAGAAGGTAAGAGTTAAAACT 58.068 33.333 0.00 0.00 43.16 2.66
540 575 8.986847 GTGAGGTAAGAAGGTAAGAGTTAAAAC 58.013 37.037 0.00 0.00 0.00 2.43
541 576 8.707449 TGTGAGGTAAGAAGGTAAGAGTTAAAA 58.293 33.333 0.00 0.00 0.00 1.52
542 577 8.253867 TGTGAGGTAAGAAGGTAAGAGTTAAA 57.746 34.615 0.00 0.00 0.00 1.52
543 578 7.844493 TGTGAGGTAAGAAGGTAAGAGTTAA 57.156 36.000 0.00 0.00 0.00 2.01
544 579 7.453752 ACATGTGAGGTAAGAAGGTAAGAGTTA 59.546 37.037 0.00 0.00 0.00 2.24
545 580 6.270231 ACATGTGAGGTAAGAAGGTAAGAGTT 59.730 38.462 0.00 0.00 0.00 3.01
546 581 5.780793 ACATGTGAGGTAAGAAGGTAAGAGT 59.219 40.000 0.00 0.00 0.00 3.24
547 582 6.287589 ACATGTGAGGTAAGAAGGTAAGAG 57.712 41.667 0.00 0.00 0.00 2.85
548 583 7.786046 TTACATGTGAGGTAAGAAGGTAAGA 57.214 36.000 9.11 0.00 0.00 2.10
549 584 8.842358 TTTTACATGTGAGGTAAGAAGGTAAG 57.158 34.615 9.11 0.00 32.76 2.34
550 585 9.280174 CTTTTTACATGTGAGGTAAGAAGGTAA 57.720 33.333 9.11 0.00 38.37 2.85
551 586 8.653191 TCTTTTTACATGTGAGGTAAGAAGGTA 58.347 33.333 9.11 0.00 40.52 3.08
552 587 7.514721 TCTTTTTACATGTGAGGTAAGAAGGT 58.485 34.615 9.11 0.00 40.52 3.50
553 588 7.119846 CCTCTTTTTACATGTGAGGTAAGAAGG 59.880 40.741 17.20 12.83 40.52 3.46
554 589 7.119846 CCCTCTTTTTACATGTGAGGTAAGAAG 59.880 40.741 21.48 12.81 41.03 2.85
555 590 6.940298 CCCTCTTTTTACATGTGAGGTAAGAA 59.060 38.462 21.48 5.18 41.83 2.52
556 591 6.472887 CCCTCTTTTTACATGTGAGGTAAGA 58.527 40.000 21.48 15.35 41.83 2.10
557 592 5.648092 CCCCTCTTTTTACATGTGAGGTAAG 59.352 44.000 21.48 12.78 41.83 2.34
558 593 5.515886 CCCCCTCTTTTTACATGTGAGGTAA 60.516 44.000 21.48 1.75 41.83 2.85
559 594 4.018779 CCCCCTCTTTTTACATGTGAGGTA 60.019 45.833 21.48 0.00 41.83 3.08
560 595 3.245264 CCCCCTCTTTTTACATGTGAGGT 60.245 47.826 21.48 0.00 41.83 3.85
561 596 3.245264 ACCCCCTCTTTTTACATGTGAGG 60.245 47.826 18.10 18.10 42.72 3.86
562 597 4.034285 ACCCCCTCTTTTTACATGTGAG 57.966 45.455 9.11 5.88 0.00 3.51
563 598 5.515886 CCTTACCCCCTCTTTTTACATGTGA 60.516 44.000 9.11 0.00 0.00 3.58
564 599 4.705023 CCTTACCCCCTCTTTTTACATGTG 59.295 45.833 9.11 0.00 0.00 3.21
565 600 4.604490 TCCTTACCCCCTCTTTTTACATGT 59.396 41.667 2.69 2.69 0.00 3.21
566 601 5.187621 TCCTTACCCCCTCTTTTTACATG 57.812 43.478 0.00 0.00 0.00 3.21
567 602 4.325109 GCTCCTTACCCCCTCTTTTTACAT 60.325 45.833 0.00 0.00 0.00 2.29
568 603 3.009805 GCTCCTTACCCCCTCTTTTTACA 59.990 47.826 0.00 0.00 0.00 2.41
569 604 3.009805 TGCTCCTTACCCCCTCTTTTTAC 59.990 47.826 0.00 0.00 0.00 2.01
570 605 3.261962 TGCTCCTTACCCCCTCTTTTTA 58.738 45.455 0.00 0.00 0.00 1.52
571 606 2.070573 TGCTCCTTACCCCCTCTTTTT 58.929 47.619 0.00 0.00 0.00 1.94
572 607 1.755200 TGCTCCTTACCCCCTCTTTT 58.245 50.000 0.00 0.00 0.00 2.27
573 608 1.566231 CATGCTCCTTACCCCCTCTTT 59.434 52.381 0.00 0.00 0.00 2.52
574 609 1.216990 CATGCTCCTTACCCCCTCTT 58.783 55.000 0.00 0.00 0.00 2.85
575 610 0.044855 ACATGCTCCTTACCCCCTCT 59.955 55.000 0.00 0.00 0.00 3.69
576 611 0.919710 AACATGCTCCTTACCCCCTC 59.080 55.000 0.00 0.00 0.00 4.30
577 612 2.280308 TAACATGCTCCTTACCCCCT 57.720 50.000 0.00 0.00 0.00 4.79
578 613 3.375647 TTTAACATGCTCCTTACCCCC 57.624 47.619 0.00 0.00 0.00 5.40
579 614 5.932619 AATTTTAACATGCTCCTTACCCC 57.067 39.130 0.00 0.00 0.00 4.95
580 615 5.580691 GCAAATTTTAACATGCTCCTTACCC 59.419 40.000 0.00 0.00 35.93 3.69
581 616 5.580691 GGCAAATTTTAACATGCTCCTTACC 59.419 40.000 0.00 0.00 38.79 2.85
582 617 6.162777 TGGCAAATTTTAACATGCTCCTTAC 58.837 36.000 0.00 0.00 38.79 2.34
583 618 6.352016 TGGCAAATTTTAACATGCTCCTTA 57.648 33.333 0.00 0.00 38.79 2.69
584 619 5.226194 TGGCAAATTTTAACATGCTCCTT 57.774 34.783 0.00 0.00 38.79 3.36
585 620 4.888326 TGGCAAATTTTAACATGCTCCT 57.112 36.364 0.00 0.00 38.79 3.69
586 621 5.876460 AGATTGGCAAATTTTAACATGCTCC 59.124 36.000 3.01 0.00 38.79 4.70
587 622 6.973229 AGATTGGCAAATTTTAACATGCTC 57.027 33.333 3.01 0.00 38.79 4.26
588 623 7.163441 AGAAGATTGGCAAATTTTAACATGCT 58.837 30.769 3.01 0.00 38.79 3.79
589 624 7.368480 AGAAGATTGGCAAATTTTAACATGC 57.632 32.000 3.01 0.00 38.06 4.06
592 627 9.823647 TGTAAAGAAGATTGGCAAATTTTAACA 57.176 25.926 3.01 4.08 0.00 2.41
617 652 9.546909 GCGATGACAAAAGAAATGGTATATATG 57.453 33.333 0.00 0.00 0.00 1.78
686 721 3.743521 TCTGTGCATGTTTAGAAGCAGT 58.256 40.909 0.00 0.00 37.72 4.40
725 800 9.555727 GAAGATTTACTCTCTAGCTCTAGAAGA 57.444 37.037 16.02 11.28 41.22 2.87
726 801 9.561069 AGAAGATTTACTCTCTAGCTCTAGAAG 57.439 37.037 7.88 9.89 41.22 2.85
729 804 9.337396 TGAAGAAGATTTACTCTCTAGCTCTAG 57.663 37.037 0.00 0.00 31.03 2.43
911 1020 7.701539 AGAAAATGCAATGGTGAATAGTACA 57.298 32.000 0.00 0.00 0.00 2.90
918 1138 9.638239 GTTAATCTAAGAAAATGCAATGGTGAA 57.362 29.630 0.00 0.00 0.00 3.18
956 1177 1.202348 GTGGGAGTGCAAATGGTAAGC 59.798 52.381 0.00 0.00 0.00 3.09
1005 1226 2.692368 GGGCCCCCATCACTCAGA 60.692 66.667 12.23 0.00 35.81 3.27
1007 1228 3.016971 CTGGGCCCCCATCACTCA 61.017 66.667 22.27 0.00 46.15 3.41
1073 1294 1.285578 GGCGACATCTTCTTCTGCTC 58.714 55.000 0.00 0.00 0.00 4.26
1106 1327 0.601046 GGGCTTTGCAGGCTTGTTTC 60.601 55.000 12.30 0.00 45.26 2.78
1280 1551 0.700564 AACACCAGATCAGCATGGGT 59.299 50.000 3.95 0.00 41.13 4.51
1292 1563 6.483307 CCCATGATAGTATAACACAACACCAG 59.517 42.308 0.00 0.00 0.00 4.00
1312 1588 6.828273 TCATACTTCAAATTGACCTACCCATG 59.172 38.462 0.00 0.00 0.00 3.66
1323 1599 8.133627 GGTTGATCATCCTCATACTTCAAATTG 58.866 37.037 14.55 0.00 0.00 2.32
1327 1603 6.070021 ACAGGTTGATCATCCTCATACTTCAA 60.070 38.462 20.46 0.00 30.91 2.69
1357 1633 2.104963 CCTTTCTCCCTATCCCCTTTCG 59.895 54.545 0.00 0.00 0.00 3.46
1380 1656 5.039920 ACATATGCTGCAGTTTATCCAGA 57.960 39.130 16.64 0.72 0.00 3.86
1516 1792 5.011227 GGAGTAGAACTCACTTTCCACTTCT 59.989 44.000 9.15 0.00 46.79 2.85
1700 2015 6.097412 AGCTCCACTTTGAAAATCTTTGTCTT 59.903 34.615 0.00 0.00 0.00 3.01
1979 2302 5.453198 GGATTGTTGTGGAAAAATGACTGGT 60.453 40.000 0.00 0.00 0.00 4.00
2387 2718 3.241530 ACGCTTGGCCTGTGAGGA 61.242 61.111 3.32 0.00 37.67 3.71
2446 2777 7.035004 CACTCAAACCAAAAATCTTGAACTCA 58.965 34.615 0.00 0.00 0.00 3.41
2485 2816 2.298610 ACTCTGTCTCACGTCTGTTCA 58.701 47.619 0.00 0.00 0.00 3.18
2579 3344 3.806949 AAGTGCAGGGAATAGACCAAA 57.193 42.857 0.00 0.00 0.00 3.28
2616 3383 4.603231 AAACATGCAAAACACAAAGCAG 57.397 36.364 0.00 0.00 40.71 4.24
2649 3416 1.140852 CACCATCCTTCCGCCTCAATA 59.859 52.381 0.00 0.00 0.00 1.90
2661 3428 2.269023 TGTCTCCATTGTCACCATCCT 58.731 47.619 0.00 0.00 0.00 3.24
2750 3517 4.042062 CCCAGCATTGATACAGGGAAGATA 59.958 45.833 0.00 0.00 38.60 1.98
2854 3625 6.771749 AGGACTTCAGATCATGGATGAAATTC 59.228 38.462 0.00 8.04 40.69 2.17
2891 3662 0.729116 CACAAAGCTGGCCATACGAG 59.271 55.000 5.51 0.00 0.00 4.18
2909 3680 0.392706 TTTGCAGAGGAACGAGCTCA 59.607 50.000 15.40 0.00 0.00 4.26
2958 3729 0.679505 TTCTCCACAAGTGAGGACCG 59.320 55.000 0.94 0.00 31.51 4.79
2989 3760 6.182627 AGTATTGACATTCTTTCATGAGGCA 58.817 36.000 0.00 0.00 0.00 4.75
3018 3834 9.807649 GCCAAAATTTAGATGATAACTCACATT 57.192 29.630 0.00 0.00 33.22 2.71
3060 3978 9.096160 CATGAACTATCAGATAAGTGCCATATC 57.904 37.037 0.00 0.00 39.39 1.63
3087 4005 1.075374 AGTGCCTTGCATTTAGGGTGA 59.925 47.619 5.09 0.00 41.91 4.02
3116 4042 0.464452 GGGGTCCGAGTCATAGTTGG 59.536 60.000 0.00 0.00 0.00 3.77
3139 4065 0.803380 GAAATGCCGCATGCCTTCAC 60.803 55.000 13.15 0.00 40.16 3.18
3286 4221 5.483685 ACCGGCTTTCAGCTATATGATAA 57.516 39.130 0.00 0.00 41.99 1.75
3383 4321 9.249457 TGATGATGATGAAGTAATAAAGACGTC 57.751 33.333 7.70 7.70 0.00 4.34
3400 4338 8.053963 AGAAGGTTCTTTGAAGATGATGATGAT 58.946 33.333 0.00 0.00 32.55 2.45
3401 4339 7.336176 CAGAAGGTTCTTTGAAGATGATGATGA 59.664 37.037 0.00 0.00 34.74 2.92
3402 4340 7.120873 ACAGAAGGTTCTTTGAAGATGATGATG 59.879 37.037 0.00 0.00 34.74 3.07
3403 4341 7.173722 ACAGAAGGTTCTTTGAAGATGATGAT 58.826 34.615 0.00 0.00 34.74 2.45
3702 4654 2.398252 TCTCGTCCACTCTACGTGAT 57.602 50.000 0.00 0.00 46.81 3.06
4062 5149 5.048013 AGGTTAAAAGACAACAGCCATTAGC 60.048 40.000 0.00 0.00 44.25 3.09
4063 5150 6.016276 ACAGGTTAAAAGACAACAGCCATTAG 60.016 38.462 0.00 0.00 0.00 1.73
4064 5151 5.830991 ACAGGTTAAAAGACAACAGCCATTA 59.169 36.000 0.00 0.00 0.00 1.90
4065 5152 4.649218 ACAGGTTAAAAGACAACAGCCATT 59.351 37.500 0.00 0.00 0.00 3.16
4156 5246 1.304381 GCAGCTTCCCCACAATGGA 60.304 57.895 0.00 0.00 40.96 3.41
4195 5285 1.908619 AGGCTGACCATGTGACACATA 59.091 47.619 20.42 4.75 36.53 2.29
4339 6065 7.790782 AAAGGAAATCCAAAGCCATACTTAA 57.209 32.000 1.67 0.00 37.75 1.85
4368 6210 1.659098 GGCCACTCACGAGAATTAACG 59.341 52.381 0.00 2.86 0.00 3.18
4827 7556 3.735591 AGTAAACTGGCTTTCGCTAACA 58.264 40.909 0.00 0.00 36.09 2.41
5137 7957 5.460646 ACACTTGCTTTTACCATCATTTCG 58.539 37.500 0.00 0.00 0.00 3.46
5404 8229 1.065926 TGAAGCTCATCTGCGGTGAAT 60.066 47.619 0.00 0.00 38.13 2.57
5413 8238 3.442977 GCACAAATTCCTGAAGCTCATCT 59.557 43.478 0.00 0.00 0.00 2.90
5510 8335 5.626955 GCATAGCTTGACAACAGTTTTCTTC 59.373 40.000 0.00 0.00 0.00 2.87
5616 8496 4.100529 CAGTTCTCATTATTTGCCAAGCG 58.899 43.478 0.00 0.00 0.00 4.68
5634 8514 7.382898 ACACAACAAAAACATAAGGAACAGTT 58.617 30.769 0.00 0.00 0.00 3.16
5651 8531 3.409026 ACCCAAGCAAAAACACAACAA 57.591 38.095 0.00 0.00 0.00 2.83
5828 8774 1.207791 CTACCCCCAGCATCAAGAGT 58.792 55.000 0.00 0.00 0.00 3.24
5831 8777 0.107017 CCACTACCCCCAGCATCAAG 60.107 60.000 0.00 0.00 0.00 3.02
5832 8778 0.844661 ACCACTACCCCCAGCATCAA 60.845 55.000 0.00 0.00 0.00 2.57
5835 8781 0.844661 TTCACCACTACCCCCAGCAT 60.845 55.000 0.00 0.00 0.00 3.79
5916 8867 3.056035 ACATCAAAGGACCGAGTAGTTCC 60.056 47.826 0.00 0.00 0.00 3.62
5917 8868 4.174762 GACATCAAAGGACCGAGTAGTTC 58.825 47.826 0.00 0.00 0.00 3.01
5918 8869 3.367087 CGACATCAAAGGACCGAGTAGTT 60.367 47.826 0.00 0.00 0.00 2.24
5919 8870 2.163815 CGACATCAAAGGACCGAGTAGT 59.836 50.000 0.00 0.00 0.00 2.73
5920 8871 2.798680 CGACATCAAAGGACCGAGTAG 58.201 52.381 0.00 0.00 0.00 2.57
5921 8872 1.135199 GCGACATCAAAGGACCGAGTA 60.135 52.381 0.00 0.00 0.00 2.59
5922 8873 0.389948 GCGACATCAAAGGACCGAGT 60.390 55.000 0.00 0.00 0.00 4.18
5993 8961 9.002061 AGTACTAGTAGTAGTAGATCCAAGGTT 57.998 37.037 16.27 0.00 41.53 3.50
6015 8983 5.415221 GCATATCATCTCCAAGCCTAGTAC 58.585 45.833 0.00 0.00 0.00 2.73
6038 9006 0.109643 CACAACATGCATGGTCCACG 60.110 55.000 29.41 14.42 0.00 4.94
6042 9010 2.099592 CCATACCACAACATGCATGGTC 59.900 50.000 29.41 0.00 43.40 4.02
6124 9097 7.080724 AGAATTCGACAGCATCTTTTTCTTTC 58.919 34.615 0.00 0.00 0.00 2.62
6160 9133 5.949354 ACCTGCAAACCTGTGCTAATTAATA 59.051 36.000 0.00 0.00 45.17 0.98
6242 10090 3.265791 CTGGAGATTGTTAGAGGCACAC 58.734 50.000 0.00 0.00 0.00 3.82
6270 10118 8.980610 TGAAGCATTTTCTCAATTTGTAATGTG 58.019 29.630 0.00 0.00 0.00 3.21
6275 10123 6.454795 GGGTGAAGCATTTTCTCAATTTGTA 58.545 36.000 0.00 0.00 0.00 2.41
6278 10126 4.559153 CGGGTGAAGCATTTTCTCAATTT 58.441 39.130 0.00 0.00 0.00 1.82
6279 10127 3.614870 GCGGGTGAAGCATTTTCTCAATT 60.615 43.478 0.00 0.00 34.19 2.32
6280 10128 2.094545 GCGGGTGAAGCATTTTCTCAAT 60.095 45.455 0.00 0.00 34.19 2.57
6281 10129 1.269448 GCGGGTGAAGCATTTTCTCAA 59.731 47.619 0.00 0.00 34.19 3.02
6282 10130 0.881118 GCGGGTGAAGCATTTTCTCA 59.119 50.000 0.00 0.00 34.19 3.27
6283 10131 0.881118 TGCGGGTGAAGCATTTTCTC 59.119 50.000 0.00 0.00 40.01 2.87
6284 10132 1.327303 TTGCGGGTGAAGCATTTTCT 58.673 45.000 0.00 0.00 44.74 2.52
6285 10133 2.147436 TTTGCGGGTGAAGCATTTTC 57.853 45.000 0.00 0.00 44.74 2.29
6286 10134 2.611225 TTTTGCGGGTGAAGCATTTT 57.389 40.000 0.00 0.00 44.74 1.82
6287 10135 2.611225 TTTTTGCGGGTGAAGCATTT 57.389 40.000 0.00 0.00 44.74 2.32
6288 10136 2.036992 TCATTTTTGCGGGTGAAGCATT 59.963 40.909 0.00 0.00 44.74 3.56
6289 10137 1.617850 TCATTTTTGCGGGTGAAGCAT 59.382 42.857 0.00 0.00 44.74 3.79
6290 10138 1.035923 TCATTTTTGCGGGTGAAGCA 58.964 45.000 0.00 0.00 43.59 3.91
6291 10139 2.147436 TTCATTTTTGCGGGTGAAGC 57.853 45.000 0.00 0.00 0.00 3.86
6310 10158 4.999311 GCCCAGCATTTTCTCAATCTTTTT 59.001 37.500 0.00 0.00 0.00 1.94
6311 10159 4.040706 TGCCCAGCATTTTCTCAATCTTTT 59.959 37.500 0.00 0.00 31.71 2.27
6312 10160 3.579586 TGCCCAGCATTTTCTCAATCTTT 59.420 39.130 0.00 0.00 31.71 2.52
6313 10161 3.167485 TGCCCAGCATTTTCTCAATCTT 58.833 40.909 0.00 0.00 31.71 2.40
6314 10162 2.811410 TGCCCAGCATTTTCTCAATCT 58.189 42.857 0.00 0.00 31.71 2.40
6331 10179 8.987890 ACAATTATTGTTAACTTGATGTTTGCC 58.012 29.630 4.56 0.00 42.22 4.52
6338 10186 9.520515 ACTCTGGACAATTATTGTTAACTTGAT 57.479 29.630 12.13 1.55 45.52 2.57
6339 10187 8.918202 ACTCTGGACAATTATTGTTAACTTGA 57.082 30.769 12.13 7.75 45.52 3.02
6372 10220 1.692411 AGTTTGTTTGCTGGTCCCTC 58.308 50.000 0.00 0.00 0.00 4.30
6375 10223 2.230660 AGCTAGTTTGTTTGCTGGTCC 58.769 47.619 0.00 0.00 34.19 4.46
6376 10224 4.672801 GCATAGCTAGTTTGTTTGCTGGTC 60.673 45.833 0.00 0.00 37.02 4.02
6380 10228 5.222631 GTTTGCATAGCTAGTTTGTTTGCT 58.777 37.500 12.91 0.00 39.30 3.91
6411 10259 1.780503 ACAAATCATAAGCAGGGGGC 58.219 50.000 0.00 0.00 45.30 5.80
6412 10260 3.099141 ACAACAAATCATAAGCAGGGGG 58.901 45.455 0.00 0.00 0.00 5.40
6413 10261 4.806640 AACAACAAATCATAAGCAGGGG 57.193 40.909 0.00 0.00 0.00 4.79
6414 10262 7.775120 AGATAAACAACAAATCATAAGCAGGG 58.225 34.615 0.00 0.00 0.00 4.45
6426 10274 9.757227 CAGGTCCAAATTTAGATAAACAACAAA 57.243 29.630 0.00 0.00 0.00 2.83
6427 10275 8.919145 ACAGGTCCAAATTTAGATAAACAACAA 58.081 29.630 0.00 0.00 0.00 2.83
6428 10276 8.472007 ACAGGTCCAAATTTAGATAAACAACA 57.528 30.769 0.00 0.00 0.00 3.33
6429 10277 9.758651 AAACAGGTCCAAATTTAGATAAACAAC 57.241 29.630 0.00 0.00 0.00 3.32
6434 10282 9.474313 AGCATAAACAGGTCCAAATTTAGATAA 57.526 29.630 0.00 0.00 0.00 1.75
6435 10283 8.902806 CAGCATAAACAGGTCCAAATTTAGATA 58.097 33.333 0.00 0.00 0.00 1.98
6436 10284 7.631377 GCAGCATAAACAGGTCCAAATTTAGAT 60.631 37.037 0.00 0.00 0.00 1.98
6437 10285 6.350110 GCAGCATAAACAGGTCCAAATTTAGA 60.350 38.462 0.00 0.00 0.00 2.10
6438 10286 5.807011 GCAGCATAAACAGGTCCAAATTTAG 59.193 40.000 0.00 0.00 0.00 1.85
6439 10287 5.480073 AGCAGCATAAACAGGTCCAAATTTA 59.520 36.000 0.00 0.00 0.00 1.40
6440 10288 4.284234 AGCAGCATAAACAGGTCCAAATTT 59.716 37.500 0.00 0.00 0.00 1.82
6441 10289 3.834231 AGCAGCATAAACAGGTCCAAATT 59.166 39.130 0.00 0.00 0.00 1.82
6442 10290 3.194116 CAGCAGCATAAACAGGTCCAAAT 59.806 43.478 0.00 0.00 0.00 2.32
6443 10291 2.557924 CAGCAGCATAAACAGGTCCAAA 59.442 45.455 0.00 0.00 0.00 3.28
6444 10292 2.161855 CAGCAGCATAAACAGGTCCAA 58.838 47.619 0.00 0.00 0.00 3.53
6445 10293 1.614051 CCAGCAGCATAAACAGGTCCA 60.614 52.381 0.00 0.00 0.00 4.02
6446 10294 1.098050 CCAGCAGCATAAACAGGTCC 58.902 55.000 0.00 0.00 0.00 4.46
6447 10295 1.098050 CCCAGCAGCATAAACAGGTC 58.902 55.000 0.00 0.00 0.00 3.85
6448 10296 0.405585 ACCCAGCAGCATAAACAGGT 59.594 50.000 0.00 0.00 0.00 4.00
6449 10297 0.813184 CACCCAGCAGCATAAACAGG 59.187 55.000 0.00 0.00 0.00 4.00
6450 10298 0.813184 CCACCCAGCAGCATAAACAG 59.187 55.000 0.00 0.00 0.00 3.16
6451 10299 0.403655 TCCACCCAGCAGCATAAACA 59.596 50.000 0.00 0.00 0.00 2.83
6452 10300 1.098050 CTCCACCCAGCAGCATAAAC 58.902 55.000 0.00 0.00 0.00 2.01
6453 10301 0.698238 ACTCCACCCAGCAGCATAAA 59.302 50.000 0.00 0.00 0.00 1.40
6454 10302 1.486310 CTACTCCACCCAGCAGCATAA 59.514 52.381 0.00 0.00 0.00 1.90
6455 10303 1.123077 CTACTCCACCCAGCAGCATA 58.877 55.000 0.00 0.00 0.00 3.14
6456 10304 1.910722 CTACTCCACCCAGCAGCAT 59.089 57.895 0.00 0.00 0.00 3.79
6457 10305 2.959484 GCTACTCCACCCAGCAGCA 61.959 63.158 0.00 0.00 35.35 4.41
6458 10306 2.124942 GCTACTCCACCCAGCAGC 60.125 66.667 0.00 0.00 35.35 5.25
6459 10307 2.586792 GGCTACTCCACCCAGCAG 59.413 66.667 0.00 0.00 37.02 4.24
6460 10308 3.009115 GGGCTACTCCACCCAGCA 61.009 66.667 0.00 0.00 46.22 4.41
6474 10322 0.744771 CGAACTCTAAAGCAGGGGGC 60.745 60.000 0.00 0.00 45.30 5.80
6475 10323 0.744771 GCGAACTCTAAAGCAGGGGG 60.745 60.000 0.00 0.00 0.00 5.40
6476 10324 0.250513 AGCGAACTCTAAAGCAGGGG 59.749 55.000 0.00 0.00 0.00 4.79
6477 10325 1.363744 CAGCGAACTCTAAAGCAGGG 58.636 55.000 0.00 0.00 0.00 4.45
6478 10326 1.338200 ACCAGCGAACTCTAAAGCAGG 60.338 52.381 0.00 0.00 41.26 4.85
6479 10327 2.086054 ACCAGCGAACTCTAAAGCAG 57.914 50.000 0.00 0.00 0.00 4.24
6480 10328 3.056107 ACATACCAGCGAACTCTAAAGCA 60.056 43.478 0.00 0.00 0.00 3.91
6481 10329 3.522553 ACATACCAGCGAACTCTAAAGC 58.477 45.455 0.00 0.00 0.00 3.51
6482 10330 3.791887 CGACATACCAGCGAACTCTAAAG 59.208 47.826 0.00 0.00 0.00 1.85
6483 10331 3.192001 ACGACATACCAGCGAACTCTAAA 59.808 43.478 0.00 0.00 0.00 1.85
6484 10332 2.751259 ACGACATACCAGCGAACTCTAA 59.249 45.455 0.00 0.00 0.00 2.10
6485 10333 2.362736 ACGACATACCAGCGAACTCTA 58.637 47.619 0.00 0.00 0.00 2.43
6486 10334 1.174783 ACGACATACCAGCGAACTCT 58.825 50.000 0.00 0.00 0.00 3.24
6487 10335 1.654105 CAACGACATACCAGCGAACTC 59.346 52.381 0.00 0.00 0.00 3.01
6488 10336 1.000506 ACAACGACATACCAGCGAACT 59.999 47.619 0.00 0.00 0.00 3.01
6489 10337 1.126113 CACAACGACATACCAGCGAAC 59.874 52.381 0.00 0.00 0.00 3.95
6490 10338 1.424403 CACAACGACATACCAGCGAA 58.576 50.000 0.00 0.00 0.00 4.70
6491 10339 0.389296 CCACAACGACATACCAGCGA 60.389 55.000 0.00 0.00 0.00 4.93
6492 10340 0.669318 ACCACAACGACATACCAGCG 60.669 55.000 0.00 0.00 0.00 5.18
6493 10341 1.997606 GTACCACAACGACATACCAGC 59.002 52.381 0.00 0.00 0.00 4.85
6494 10342 3.508762 GAGTACCACAACGACATACCAG 58.491 50.000 0.00 0.00 0.00 4.00
6495 10343 2.095110 CGAGTACCACAACGACATACCA 60.095 50.000 0.00 0.00 0.00 3.25
6496 10344 2.095059 ACGAGTACCACAACGACATACC 60.095 50.000 0.00 0.00 0.00 2.73
6497 10345 2.912967 CACGAGTACCACAACGACATAC 59.087 50.000 0.00 0.00 0.00 2.39
6498 10346 2.095110 CCACGAGTACCACAACGACATA 60.095 50.000 0.00 0.00 0.00 2.29
6499 10347 1.336517 CCACGAGTACCACAACGACAT 60.337 52.381 0.00 0.00 0.00 3.06
6500 10348 0.031043 CCACGAGTACCACAACGACA 59.969 55.000 0.00 0.00 0.00 4.35
6501 10349 0.665369 CCCACGAGTACCACAACGAC 60.665 60.000 0.00 0.00 0.00 4.34
6502 10350 1.661480 CCCACGAGTACCACAACGA 59.339 57.895 0.00 0.00 0.00 3.85
6503 10351 2.025418 GCCCACGAGTACCACAACG 61.025 63.158 0.00 0.00 0.00 4.10
6504 10352 0.250166 AAGCCCACGAGTACCACAAC 60.250 55.000 0.00 0.00 0.00 3.32
6505 10353 0.034337 GAAGCCCACGAGTACCACAA 59.966 55.000 0.00 0.00 0.00 3.33
6506 10354 0.830444 AGAAGCCCACGAGTACCACA 60.830 55.000 0.00 0.00 0.00 4.17
6507 10355 1.180029 TAGAAGCCCACGAGTACCAC 58.820 55.000 0.00 0.00 0.00 4.16
6508 10356 2.154567 ATAGAAGCCCACGAGTACCA 57.845 50.000 0.00 0.00 0.00 3.25
6509 10357 3.132467 AGAAATAGAAGCCCACGAGTACC 59.868 47.826 0.00 0.00 0.00 3.34
6510 10358 4.142227 TGAGAAATAGAAGCCCACGAGTAC 60.142 45.833 0.00 0.00 0.00 2.73
6511 10359 4.021229 TGAGAAATAGAAGCCCACGAGTA 58.979 43.478 0.00 0.00 0.00 2.59
6512 10360 2.832129 TGAGAAATAGAAGCCCACGAGT 59.168 45.455 0.00 0.00 0.00 4.18
6513 10361 3.526931 TGAGAAATAGAAGCCCACGAG 57.473 47.619 0.00 0.00 0.00 4.18
6514 10362 3.973206 TTGAGAAATAGAAGCCCACGA 57.027 42.857 0.00 0.00 0.00 4.35
6515 10363 4.191544 TCATTGAGAAATAGAAGCCCACG 58.808 43.478 0.00 0.00 0.00 4.94
6516 10364 6.515272 TTTCATTGAGAAATAGAAGCCCAC 57.485 37.500 0.00 0.00 41.17 4.61
6528 10376 4.221262 CCTGGCTCCAAATTTCATTGAGAA 59.779 41.667 7.41 0.00 31.84 2.87
6529 10377 3.765511 CCTGGCTCCAAATTTCATTGAGA 59.234 43.478 7.41 0.00 31.84 3.27
6530 10378 3.118884 CCCTGGCTCCAAATTTCATTGAG 60.119 47.826 0.00 0.00 31.84 3.02
6531 10379 2.833338 CCCTGGCTCCAAATTTCATTGA 59.167 45.455 0.00 0.00 31.84 2.57
6532 10380 2.093341 CCCCTGGCTCCAAATTTCATTG 60.093 50.000 0.00 0.00 0.00 2.82
6533 10381 2.190538 CCCCTGGCTCCAAATTTCATT 58.809 47.619 0.00 0.00 0.00 2.57
6534 10382 1.623279 CCCCCTGGCTCCAAATTTCAT 60.623 52.381 0.00 0.00 0.00 2.57
6535 10383 0.252193 CCCCCTGGCTCCAAATTTCA 60.252 55.000 0.00 0.00 0.00 2.69
6536 10384 0.041090 TCCCCCTGGCTCCAAATTTC 59.959 55.000 0.00 0.00 0.00 2.17
6537 10385 0.041684 CTCCCCCTGGCTCCAAATTT 59.958 55.000 0.00 0.00 0.00 1.82
6538 10386 1.699752 CTCCCCCTGGCTCCAAATT 59.300 57.895 0.00 0.00 0.00 1.82
6539 10387 2.319762 CCTCCCCCTGGCTCCAAAT 61.320 63.158 0.00 0.00 0.00 2.32
6540 10388 2.941025 CCTCCCCCTGGCTCCAAA 60.941 66.667 0.00 0.00 0.00 3.28
6553 10401 1.679898 CCGATAATCAGGGGCCTCC 59.320 63.158 0.00 0.00 0.00 4.30
6554 10402 1.679898 CCCGATAATCAGGGGCCTC 59.320 63.158 0.84 0.00 43.90 4.70
6555 10403 3.906980 CCCGATAATCAGGGGCCT 58.093 61.111 0.84 0.00 43.90 5.19
6575 10423 1.203052 CTGATGGCTCCATGCGTTTTT 59.797 47.619 6.07 0.00 44.05 1.94
6576 10424 0.813184 CTGATGGCTCCATGCGTTTT 59.187 50.000 6.07 0.00 44.05 2.43
6577 10425 1.660560 GCTGATGGCTCCATGCGTTT 61.661 55.000 6.07 0.00 44.05 3.60
6578 10426 2.117156 GCTGATGGCTCCATGCGTT 61.117 57.895 6.07 0.00 44.05 4.84
6579 10427 2.515523 GCTGATGGCTCCATGCGT 60.516 61.111 6.07 0.00 44.05 5.24
6580 10428 2.515290 TGCTGATGGCTCCATGCG 60.515 61.111 6.07 0.00 44.05 4.73
6581 10429 2.846652 GCTGCTGATGGCTCCATGC 61.847 63.158 6.07 5.29 42.39 4.06
6582 10430 1.448119 CTGCTGCTGATGGCTCCATG 61.448 60.000 6.07 0.00 42.39 3.66
6583 10431 1.152943 CTGCTGCTGATGGCTCCAT 60.153 57.895 0.14 0.14 42.39 3.41
6584 10432 2.271173 CTGCTGCTGATGGCTCCA 59.729 61.111 0.00 0.00 42.39 3.86
6585 10433 2.516460 CCTGCTGCTGATGGCTCC 60.516 66.667 8.20 0.00 42.39 4.70
6613 10461 3.332187 TCCATTAGTGTGGGATTGGTTGA 59.668 43.478 0.00 0.00 39.80 3.18
6626 10474 7.278875 AGCTTCTTCTCCTAATTCCATTAGTG 58.721 38.462 3.43 0.00 40.44 2.74
6641 10489 2.094494 TCACCATCGTGAGCTTCTTCTC 60.094 50.000 0.00 0.00 44.20 2.87
6666 10514 5.521906 TGTACTGCTGAAGGAGATATGAC 57.478 43.478 5.79 0.00 36.93 3.06
6671 10519 4.141756 CCTCATTGTACTGCTGAAGGAGAT 60.142 45.833 5.79 0.00 36.93 2.75
6699 10547 2.665000 CTCCCTCAAAGCCAGCGA 59.335 61.111 0.00 0.00 0.00 4.93
6700 10548 2.437359 CCTCCCTCAAAGCCAGCG 60.437 66.667 0.00 0.00 0.00 5.18
6701 10549 1.077858 CTCCTCCCTCAAAGCCAGC 60.078 63.158 0.00 0.00 0.00 4.85
6702 10550 1.077858 GCTCCTCCCTCAAAGCCAG 60.078 63.158 0.00 0.00 0.00 4.85
6703 10551 1.539869 AGCTCCTCCCTCAAAGCCA 60.540 57.895 0.00 0.00 35.32 4.75
6705 10553 0.107752 CAGAGCTCCTCCCTCAAAGC 60.108 60.000 10.93 0.00 34.95 3.51
6706 10554 0.540923 CCAGAGCTCCTCCCTCAAAG 59.459 60.000 10.93 0.00 0.00 2.77
6707 10555 0.178891 ACCAGAGCTCCTCCCTCAAA 60.179 55.000 10.93 0.00 0.00 2.69
6709 10557 0.033011 GTACCAGAGCTCCTCCCTCA 60.033 60.000 10.93 0.00 0.00 3.86
6710 10558 0.033011 TGTACCAGAGCTCCTCCCTC 60.033 60.000 10.93 0.00 0.00 4.30
6741 10600 0.822164 GCCTAGGCGAACCTCTACAA 59.178 55.000 20.16 0.00 46.34 2.41
6769 10628 1.495878 GCTCAGCATGGAGTGATACG 58.504 55.000 0.00 0.00 37.24 3.06
6777 10636 4.166888 GGAGCGGCTCAGCATGGA 62.167 66.667 29.33 0.00 40.15 3.41
6807 10667 3.717294 GGTGGGTGGCCTGACGAT 61.717 66.667 3.32 0.00 0.00 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.