Multiple sequence alignment - TraesCS7A01G532400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G532400 chr7A 100.000 3059 0 0 1 3059 711292179 711295237 0.000000e+00 5650.0
1 TraesCS7A01G532400 chr7A 90.161 498 34 10 833 1329 711210204 711210687 4.300000e-178 634.0
2 TraesCS7A01G532400 chr7A 95.286 297 13 1 1 296 127670165 127670461 1.280000e-128 470.0
3 TraesCS7A01G532400 chr7A 87.770 278 27 4 398 673 564832704 564832432 4.920000e-83 318.0
4 TraesCS7A01G532400 chr7A 87.189 281 29 7 399 678 586627780 586627506 2.290000e-81 313.0
5 TraesCS7A01G532400 chr7A 83.146 89 10 5 2109 2194 687157784 687157870 3.270000e-10 76.8
6 TraesCS7A01G532400 chr7A 82.022 89 10 6 2109 2194 687224569 687224654 1.520000e-08 71.3
7 TraesCS7A01G532400 chr7D 92.637 1494 90 12 833 2325 617525049 617526523 0.000000e+00 2132.0
8 TraesCS7A01G532400 chr7D 96.107 745 23 3 2316 3059 617534698 617535437 0.000000e+00 1210.0
9 TraesCS7A01G532400 chr7D 95.932 295 9 2 1 292 66411069 66411363 2.760000e-130 475.0
10 TraesCS7A01G532400 chr7D 91.617 167 11 2 670 834 617524852 617525017 8.530000e-56 228.0
11 TraesCS7A01G532400 chr7D 92.035 113 6 2 294 406 617524744 617524853 4.080000e-34 156.0
12 TraesCS7A01G532400 chr7B 91.389 1498 95 17 670 2139 711747204 711748695 0.000000e+00 2021.0
13 TraesCS7A01G532400 chr7B 93.636 880 40 10 2181 3059 711748702 711749566 0.000000e+00 1301.0
14 TraesCS7A01G532400 chr7B 88.104 269 27 4 405 673 512995111 512994848 6.370000e-82 315.0
15 TraesCS7A01G532400 chr7B 90.265 113 5 2 294 406 711747099 711747205 3.180000e-30 143.0
16 TraesCS7A01G532400 chr7B 87.209 86 8 3 2109 2192 733050359 733050443 9.030000e-16 95.3
17 TraesCS7A01G532400 chrUn 95.652 299 12 1 1 298 24426301 24426003 2.130000e-131 479.0
18 TraesCS7A01G532400 chrUn 94.966 298 13 2 1 297 103311851 103311555 1.660000e-127 466.0
19 TraesCS7A01G532400 chrUn 94.389 303 16 1 1 302 103379666 103379364 5.970000e-127 464.0
20 TraesCS7A01G532400 chr1D 95.932 295 11 1 1 294 436042608 436042314 7.670000e-131 477.0
21 TraesCS7A01G532400 chr1D 95.318 299 12 2 1 298 17995283 17995580 9.930000e-130 473.0
22 TraesCS7A01G532400 chr1D 87.956 274 26 6 400 672 24009177 24008910 1.770000e-82 316.0
23 TraesCS7A01G532400 chr1D 87.681 276 28 5 399 673 57541436 57541166 1.770000e-82 316.0
24 TraesCS7A01G532400 chr1D 87.209 86 10 1 2109 2193 41987705 41987620 2.510000e-16 97.1
25 TraesCS7A01G532400 chr1D 84.706 85 11 2 2114 2197 98843022 98842939 1.950000e-12 84.2
26 TraesCS7A01G532400 chr1D 100.000 35 0 0 2159 2193 58448423 58448457 7.080000e-07 65.8
27 TraesCS7A01G532400 chr6A 95.593 295 11 2 1 294 522946141 522946434 3.570000e-129 472.0
28 TraesCS7A01G532400 chr6A 81.915 94 16 1 2109 2201 501496088 501496181 9.090000e-11 78.7
29 TraesCS7A01G532400 chr2D 94.966 298 14 1 1 297 608401040 608401337 1.660000e-127 466.0
30 TraesCS7A01G532400 chr2D 89.147 258 23 1 404 661 264164066 264164318 1.770000e-82 316.0
31 TraesCS7A01G532400 chr6D 88.043 276 27 2 399 673 434030803 434030533 3.800000e-84 322.0
32 TraesCS7A01G532400 chr6D 85.882 85 11 1 2109 2192 443950216 443950132 4.200000e-14 89.8
33 TraesCS7A01G532400 chr4D 88.148 270 25 7 405 672 297107037 297107301 6.370000e-82 315.0
34 TraesCS7A01G532400 chr4D 84.848 66 8 2 2123 2187 79222928 79222992 7.080000e-07 65.8
35 TraesCS7A01G532400 chr5B 87.319 276 29 6 399 673 477903364 477903634 8.240000e-81 311.0
36 TraesCS7A01G532400 chr4A 82.022 89 11 5 2109 2194 16858300 16858214 1.520000e-08 71.3
37 TraesCS7A01G532400 chr1A 82.500 80 13 1 2115 2194 428236733 428236655 5.470000e-08 69.4
38 TraesCS7A01G532400 chr3B 80.899 89 14 3 2109 2195 735380507 735380420 1.970000e-07 67.6
39 TraesCS7A01G532400 chr3D 93.023 43 3 0 2155 2197 93023492 93023534 2.550000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G532400 chr7A 711292179 711295237 3058 False 5650.000000 5650 100.000000 1 3059 1 chr7A.!!$F5 3058
1 TraesCS7A01G532400 chr7D 617534698 617535437 739 False 1210.000000 1210 96.107000 2316 3059 1 chr7D.!!$F2 743
2 TraesCS7A01G532400 chr7D 617524744 617526523 1779 False 838.666667 2132 92.096333 294 2325 3 chr7D.!!$F3 2031
3 TraesCS7A01G532400 chr7B 711747099 711749566 2467 False 1155.000000 2021 91.763333 294 3059 3 chr7B.!!$F2 2765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
876 911 0.099436 GCATAAGTTGCCTGCCGAAG 59.901 55.0 0.0 0.0 46.15 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2280 2318 0.395862 GAGATCGGTCTCCCCACTGA 60.396 60.0 15.13 0.0 44.2 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.374071 TGTTTCCAGAGACTAAAAAGTCCC 58.626 41.667 2.00 0.00 39.50 4.46
24 25 5.132144 TGTTTCCAGAGACTAAAAAGTCCCT 59.868 40.000 2.00 0.00 39.50 4.20
25 26 6.328148 TGTTTCCAGAGACTAAAAAGTCCCTA 59.672 38.462 2.00 0.00 39.50 3.53
26 27 6.607004 TTCCAGAGACTAAAAAGTCCCTAG 57.393 41.667 2.00 0.00 39.50 3.02
27 28 5.652324 TCCAGAGACTAAAAAGTCCCTAGT 58.348 41.667 2.00 0.00 39.50 2.57
28 29 5.715753 TCCAGAGACTAAAAAGTCCCTAGTC 59.284 44.000 2.00 0.00 41.17 2.59
29 30 5.105269 CCAGAGACTAAAAAGTCCCTAGTCC 60.105 48.000 2.00 0.00 41.59 3.85
30 31 5.024785 AGAGACTAAAAAGTCCCTAGTCCC 58.975 45.833 2.00 0.00 41.59 4.46
31 32 5.024785 GAGACTAAAAAGTCCCTAGTCCCT 58.975 45.833 2.00 0.00 41.59 4.20
32 33 5.413277 AGACTAAAAAGTCCCTAGTCCCTT 58.587 41.667 2.00 0.00 41.59 3.95
33 34 5.484644 AGACTAAAAAGTCCCTAGTCCCTTC 59.515 44.000 2.00 0.00 41.59 3.46
34 35 4.535294 ACTAAAAAGTCCCTAGTCCCTTCC 59.465 45.833 0.00 0.00 0.00 3.46
35 36 3.293215 AAAAGTCCCTAGTCCCTTCCT 57.707 47.619 0.00 0.00 0.00 3.36
36 37 4.431158 AAAAGTCCCTAGTCCCTTCCTA 57.569 45.455 0.00 0.00 0.00 2.94
37 38 3.691698 AAGTCCCTAGTCCCTTCCTAG 57.308 52.381 0.00 0.00 33.23 3.02
38 39 2.874447 AGTCCCTAGTCCCTTCCTAGA 58.126 52.381 0.00 0.00 35.01 2.43
39 40 2.787035 AGTCCCTAGTCCCTTCCTAGAG 59.213 54.545 0.00 0.00 35.01 2.43
40 41 2.145298 TCCCTAGTCCCTTCCTAGAGG 58.855 57.143 0.00 0.00 35.01 3.69
41 42 1.860906 CCCTAGTCCCTTCCTAGAGGT 59.139 57.143 0.00 0.00 35.01 3.85
42 43 2.247897 CCCTAGTCCCTTCCTAGAGGTT 59.752 54.545 0.00 0.00 35.01 3.50
43 44 3.466344 CCCTAGTCCCTTCCTAGAGGTTA 59.534 52.174 0.00 0.00 35.01 2.85
44 45 4.108287 CCCTAGTCCCTTCCTAGAGGTTAT 59.892 50.000 0.00 0.00 35.01 1.89
45 46 5.401587 CCCTAGTCCCTTCCTAGAGGTTATT 60.402 48.000 0.00 0.00 35.01 1.40
46 47 6.183361 CCCTAGTCCCTTCCTAGAGGTTATTA 60.183 46.154 0.00 0.00 35.01 0.98
47 48 7.303713 CCTAGTCCCTTCCTAGAGGTTATTAA 58.696 42.308 0.00 0.00 35.01 1.40
48 49 7.788385 CCTAGTCCCTTCCTAGAGGTTATTAAA 59.212 40.741 0.00 0.00 35.01 1.52
49 50 9.382307 CTAGTCCCTTCCTAGAGGTTATTAAAT 57.618 37.037 0.00 0.00 35.01 1.40
50 51 8.035448 AGTCCCTTCCTAGAGGTTATTAAATG 57.965 38.462 0.00 0.00 34.88 2.32
51 52 7.849904 AGTCCCTTCCTAGAGGTTATTAAATGA 59.150 37.037 0.00 0.00 34.88 2.57
52 53 7.932491 GTCCCTTCCTAGAGGTTATTAAATGAC 59.068 40.741 0.00 0.00 34.88 3.06
53 54 7.072076 TCCCTTCCTAGAGGTTATTAAATGACC 59.928 40.741 0.00 0.00 39.09 4.02
54 55 7.147373 CCCTTCCTAGAGGTTATTAAATGACCA 60.147 40.741 6.26 0.00 41.10 4.02
55 56 8.440771 CCTTCCTAGAGGTTATTAAATGACCAT 58.559 37.037 6.26 0.00 41.10 3.55
56 57 9.277783 CTTCCTAGAGGTTATTAAATGACCATG 57.722 37.037 6.26 0.00 41.10 3.66
57 58 8.331931 TCCTAGAGGTTATTAAATGACCATGT 57.668 34.615 6.26 0.00 41.10 3.21
58 59 8.778059 TCCTAGAGGTTATTAAATGACCATGTT 58.222 33.333 6.26 0.00 41.10 2.71
59 60 8.840321 CCTAGAGGTTATTAAATGACCATGTTG 58.160 37.037 6.26 0.00 41.10 3.33
60 61 7.100458 AGAGGTTATTAAATGACCATGTTGC 57.900 36.000 6.26 0.00 41.10 4.17
61 62 6.891908 AGAGGTTATTAAATGACCATGTTGCT 59.108 34.615 6.26 0.00 41.10 3.91
62 63 7.067494 AGAGGTTATTAAATGACCATGTTGCTC 59.933 37.037 6.26 0.00 41.10 4.26
63 64 6.096846 AGGTTATTAAATGACCATGTTGCTCC 59.903 38.462 6.26 0.00 41.10 4.70
64 65 6.096846 GGTTATTAAATGACCATGTTGCTCCT 59.903 38.462 0.00 0.00 38.68 3.69
65 66 7.284489 GGTTATTAAATGACCATGTTGCTCCTA 59.716 37.037 0.00 0.00 38.68 2.94
66 67 6.949352 ATTAAATGACCATGTTGCTCCTAG 57.051 37.500 0.00 0.00 0.00 3.02
67 68 4.307032 AAATGACCATGTTGCTCCTAGT 57.693 40.909 0.00 0.00 0.00 2.57
68 69 5.435686 AAATGACCATGTTGCTCCTAGTA 57.564 39.130 0.00 0.00 0.00 1.82
69 70 5.636903 AATGACCATGTTGCTCCTAGTAT 57.363 39.130 0.00 0.00 0.00 2.12
70 71 6.747414 AATGACCATGTTGCTCCTAGTATA 57.253 37.500 0.00 0.00 0.00 1.47
71 72 6.942163 ATGACCATGTTGCTCCTAGTATAT 57.058 37.500 0.00 0.00 0.00 0.86
72 73 8.435931 AATGACCATGTTGCTCCTAGTATATA 57.564 34.615 0.00 0.00 0.00 0.86
73 74 7.468141 TGACCATGTTGCTCCTAGTATATAG 57.532 40.000 0.00 0.00 0.00 1.31
74 75 7.238710 TGACCATGTTGCTCCTAGTATATAGA 58.761 38.462 0.00 0.00 0.00 1.98
75 76 7.728532 TGACCATGTTGCTCCTAGTATATAGAA 59.271 37.037 0.00 0.00 0.00 2.10
76 77 8.492415 ACCATGTTGCTCCTAGTATATAGAAA 57.508 34.615 0.00 0.00 0.00 2.52
77 78 8.934697 ACCATGTTGCTCCTAGTATATAGAAAA 58.065 33.333 0.00 0.00 0.00 2.29
78 79 9.429359 CCATGTTGCTCCTAGTATATAGAAAAG 57.571 37.037 0.00 0.00 0.00 2.27
79 80 9.988815 CATGTTGCTCCTAGTATATAGAAAAGT 57.011 33.333 0.00 0.00 0.00 2.66
96 97 9.744468 ATAGAAAAGTAACAATCAAACAACACC 57.256 29.630 0.00 0.00 0.00 4.16
97 98 7.607250 AGAAAAGTAACAATCAAACAACACCA 58.393 30.769 0.00 0.00 0.00 4.17
98 99 8.257306 AGAAAAGTAACAATCAAACAACACCAT 58.743 29.630 0.00 0.00 0.00 3.55
99 100 7.769272 AAAGTAACAATCAAACAACACCATG 57.231 32.000 0.00 0.00 0.00 3.66
100 101 5.841810 AGTAACAATCAAACAACACCATGG 58.158 37.500 11.19 11.19 0.00 3.66
101 102 3.749665 ACAATCAAACAACACCATGGG 57.250 42.857 18.09 7.72 0.00 4.00
102 103 2.368221 ACAATCAAACAACACCATGGGG 59.632 45.455 14.08 14.08 41.29 4.96
113 114 4.358841 CATGGGGTGACGGGCCAA 62.359 66.667 4.39 0.00 0.00 4.52
114 115 3.346734 ATGGGGTGACGGGCCAAT 61.347 61.111 4.39 0.00 0.00 3.16
115 116 2.004120 ATGGGGTGACGGGCCAATA 61.004 57.895 4.39 0.00 0.00 1.90
116 117 1.994885 ATGGGGTGACGGGCCAATAG 61.995 60.000 4.39 0.00 0.00 1.73
117 118 2.192175 GGGTGACGGGCCAATAGG 59.808 66.667 4.39 0.00 38.23 2.57
118 119 2.676265 GGGTGACGGGCCAATAGGT 61.676 63.158 4.39 0.00 37.19 3.08
119 120 1.451387 GGTGACGGGCCAATAGGTG 60.451 63.158 4.39 0.00 37.19 4.00
120 121 2.112815 GTGACGGGCCAATAGGTGC 61.113 63.158 4.39 0.00 37.19 5.01
121 122 2.270850 GACGGGCCAATAGGTGCA 59.729 61.111 4.39 0.00 37.19 4.57
122 123 1.152963 GACGGGCCAATAGGTGCAT 60.153 57.895 4.39 0.00 37.19 3.96
123 124 1.447317 GACGGGCCAATAGGTGCATG 61.447 60.000 4.39 0.00 37.19 4.06
124 125 2.195567 CGGGCCAATAGGTGCATGG 61.196 63.158 4.39 0.00 37.19 3.66
125 126 1.229927 GGGCCAATAGGTGCATGGA 59.770 57.895 4.39 0.00 36.27 3.41
126 127 0.825010 GGGCCAATAGGTGCATGGAG 60.825 60.000 4.39 0.00 36.27 3.86
127 128 0.183492 GGCCAATAGGTGCATGGAGA 59.817 55.000 7.48 0.00 36.27 3.71
128 129 1.602311 GCCAATAGGTGCATGGAGAG 58.398 55.000 7.48 0.00 36.27 3.20
129 130 1.816961 GCCAATAGGTGCATGGAGAGG 60.817 57.143 7.48 0.00 36.27 3.69
130 131 1.602311 CAATAGGTGCATGGAGAGGC 58.398 55.000 0.00 0.00 0.00 4.70
131 132 1.134007 CAATAGGTGCATGGAGAGGCA 60.134 52.381 0.00 0.00 36.28 4.75
132 133 1.442773 ATAGGTGCATGGAGAGGCAT 58.557 50.000 0.00 0.00 41.77 4.40
133 134 1.216064 TAGGTGCATGGAGAGGCATT 58.784 50.000 0.00 0.00 41.77 3.56
134 135 0.395311 AGGTGCATGGAGAGGCATTG 60.395 55.000 0.00 0.00 41.77 2.82
135 136 0.682209 GGTGCATGGAGAGGCATTGT 60.682 55.000 0.00 0.00 41.77 2.71
136 137 1.180029 GTGCATGGAGAGGCATTGTT 58.820 50.000 0.00 0.00 41.77 2.83
137 138 1.135199 GTGCATGGAGAGGCATTGTTG 60.135 52.381 0.00 0.00 41.77 3.33
138 139 0.458669 GCATGGAGAGGCATTGTTGG 59.541 55.000 0.00 0.00 0.00 3.77
139 140 1.956636 GCATGGAGAGGCATTGTTGGA 60.957 52.381 0.00 0.00 0.00 3.53
140 141 2.449464 CATGGAGAGGCATTGTTGGAA 58.551 47.619 0.00 0.00 0.00 3.53
141 142 2.673775 TGGAGAGGCATTGTTGGAAA 57.326 45.000 0.00 0.00 0.00 3.13
142 143 2.956132 TGGAGAGGCATTGTTGGAAAA 58.044 42.857 0.00 0.00 0.00 2.29
143 144 2.892852 TGGAGAGGCATTGTTGGAAAAG 59.107 45.455 0.00 0.00 0.00 2.27
144 145 2.893489 GGAGAGGCATTGTTGGAAAAGT 59.107 45.455 0.00 0.00 0.00 2.66
145 146 3.057245 GGAGAGGCATTGTTGGAAAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
146 147 2.893489 AGAGGCATTGTTGGAAAAGTCC 59.107 45.455 0.00 0.00 45.21 3.85
147 148 1.970640 AGGCATTGTTGGAAAAGTCCC 59.029 47.619 0.00 0.00 44.23 4.46
148 149 1.691434 GGCATTGTTGGAAAAGTCCCA 59.309 47.619 0.00 0.00 44.23 4.37
149 150 2.103941 GGCATTGTTGGAAAAGTCCCAA 59.896 45.455 0.00 0.00 44.23 4.12
150 151 3.432890 GGCATTGTTGGAAAAGTCCCAAA 60.433 43.478 0.00 0.00 44.41 3.28
151 152 4.195416 GCATTGTTGGAAAAGTCCCAAAA 58.805 39.130 0.00 0.00 44.41 2.44
152 153 4.273235 GCATTGTTGGAAAAGTCCCAAAAG 59.727 41.667 0.00 0.00 44.41 2.27
153 154 5.669477 CATTGTTGGAAAAGTCCCAAAAGA 58.331 37.500 0.00 0.00 44.41 2.52
154 155 4.729227 TGTTGGAAAAGTCCCAAAAGAC 57.271 40.909 0.00 0.00 44.41 3.01
156 157 4.401202 TGTTGGAAAAGTCCCAAAAGACTC 59.599 41.667 0.00 0.00 46.44 3.36
157 158 4.519906 TGGAAAAGTCCCAAAAGACTCT 57.480 40.909 0.00 0.00 46.44 3.24
158 159 4.461198 TGGAAAAGTCCCAAAAGACTCTC 58.539 43.478 0.00 0.00 46.44 3.20
159 160 3.821600 GGAAAAGTCCCAAAAGACTCTCC 59.178 47.826 6.90 6.90 46.44 3.71
160 161 4.446455 GGAAAAGTCCCAAAAGACTCTCCT 60.446 45.833 12.31 0.00 46.44 3.69
161 162 4.797912 AAAGTCCCAAAAGACTCTCCTT 57.202 40.909 0.00 0.00 46.44 3.36
162 163 3.778954 AGTCCCAAAAGACTCTCCTTG 57.221 47.619 0.00 0.00 43.76 3.61
163 164 3.318313 AGTCCCAAAAGACTCTCCTTGA 58.682 45.455 3.43 0.00 43.76 3.02
164 165 3.326297 AGTCCCAAAAGACTCTCCTTGAG 59.674 47.826 3.43 0.00 43.76 3.02
165 166 3.325135 GTCCCAAAAGACTCTCCTTGAGA 59.675 47.826 0.00 0.00 45.39 3.27
178 179 6.678568 TCTCCTTGAGAGTCTTCTTCATTT 57.321 37.500 0.00 0.00 43.71 2.32
179 180 7.782897 TCTCCTTGAGAGTCTTCTTCATTTA 57.217 36.000 0.00 0.00 43.71 1.40
180 181 8.195165 TCTCCTTGAGAGTCTTCTTCATTTAA 57.805 34.615 0.00 0.00 43.71 1.52
181 182 8.820831 TCTCCTTGAGAGTCTTCTTCATTTAAT 58.179 33.333 0.00 0.00 43.71 1.40
182 183 9.097257 CTCCTTGAGAGTCTTCTTCATTTAATC 57.903 37.037 0.00 0.00 37.87 1.75
183 184 8.043710 TCCTTGAGAGTCTTCTTCATTTAATCC 58.956 37.037 0.00 0.00 32.53 3.01
184 185 7.281999 CCTTGAGAGTCTTCTTCATTTAATCCC 59.718 40.741 0.00 0.00 32.53 3.85
185 186 7.257790 TGAGAGTCTTCTTCATTTAATCCCA 57.742 36.000 0.00 0.00 32.53 4.37
186 187 7.689299 TGAGAGTCTTCTTCATTTAATCCCAA 58.311 34.615 0.00 0.00 32.53 4.12
187 188 8.163408 TGAGAGTCTTCTTCATTTAATCCCAAA 58.837 33.333 0.00 0.00 32.53 3.28
188 189 9.183368 GAGAGTCTTCTTCATTTAATCCCAAAT 57.817 33.333 0.00 0.00 32.53 2.32
189 190 8.964772 AGAGTCTTCTTCATTTAATCCCAAATG 58.035 33.333 2.83 2.83 44.00 2.32
190 191 8.655935 AGTCTTCTTCATTTAATCCCAAATGT 57.344 30.769 8.07 0.00 43.40 2.71
191 192 8.743714 AGTCTTCTTCATTTAATCCCAAATGTC 58.256 33.333 8.07 0.00 43.40 3.06
192 193 8.743714 GTCTTCTTCATTTAATCCCAAATGTCT 58.256 33.333 8.07 0.00 43.40 3.41
193 194 9.973661 TCTTCTTCATTTAATCCCAAATGTCTA 57.026 29.630 8.07 0.00 43.40 2.59
195 196 9.753674 TTCTTCATTTAATCCCAAATGTCTAGT 57.246 29.630 8.07 0.00 43.40 2.57
196 197 9.753674 TCTTCATTTAATCCCAAATGTCTAGTT 57.246 29.630 8.07 0.00 43.40 2.24
202 203 9.457436 TTTAATCCCAAATGTCTAGTTTAGTCC 57.543 33.333 0.00 0.00 0.00 3.85
203 204 5.431179 TCCCAAATGTCTAGTTTAGTCCC 57.569 43.478 0.00 0.00 0.00 4.46
204 205 5.098663 TCCCAAATGTCTAGTTTAGTCCCT 58.901 41.667 0.00 0.00 0.00 4.20
205 206 6.266080 TCCCAAATGTCTAGTTTAGTCCCTA 58.734 40.000 0.00 0.00 0.00 3.53
206 207 6.731919 TCCCAAATGTCTAGTTTAGTCCCTAA 59.268 38.462 0.00 0.00 0.00 2.69
207 208 7.238096 TCCCAAATGTCTAGTTTAGTCCCTAAA 59.762 37.037 0.00 0.00 34.12 1.85
208 209 7.886446 CCCAAATGTCTAGTTTAGTCCCTAAAA 59.114 37.037 0.00 0.00 37.62 1.52
209 210 9.292195 CCAAATGTCTAGTTTAGTCCCTAAAAA 57.708 33.333 0.00 0.00 37.62 1.94
212 213 9.722184 AATGTCTAGTTTAGTCCCTAAAAAGTC 57.278 33.333 0.00 0.22 37.62 3.01
213 214 8.488308 TGTCTAGTTTAGTCCCTAAAAAGTCT 57.512 34.615 0.00 0.00 37.62 3.24
214 215 8.583296 TGTCTAGTTTAGTCCCTAAAAAGTCTC 58.417 37.037 0.00 0.00 37.62 3.36
215 216 8.805175 GTCTAGTTTAGTCCCTAAAAAGTCTCT 58.195 37.037 0.00 0.00 37.62 3.10
216 217 9.022884 TCTAGTTTAGTCCCTAAAAAGTCTCTC 57.977 37.037 0.00 0.00 37.62 3.20
217 218 7.006865 AGTTTAGTCCCTAAAAAGTCTCTCC 57.993 40.000 0.00 0.00 37.62 3.71
218 219 6.013553 AGTTTAGTCCCTAAAAAGTCTCTCCC 60.014 42.308 0.00 0.00 37.62 4.30
219 220 2.832733 AGTCCCTAAAAAGTCTCTCCCG 59.167 50.000 0.00 0.00 0.00 5.14
220 221 2.566279 GTCCCTAAAAAGTCTCTCCCGT 59.434 50.000 0.00 0.00 0.00 5.28
221 222 3.007723 GTCCCTAAAAAGTCTCTCCCGTT 59.992 47.826 0.00 0.00 0.00 4.44
222 223 3.649502 TCCCTAAAAAGTCTCTCCCGTTT 59.350 43.478 0.00 0.00 0.00 3.60
223 224 3.751698 CCCTAAAAAGTCTCTCCCGTTTG 59.248 47.826 0.00 0.00 0.00 2.93
224 225 3.751698 CCTAAAAAGTCTCTCCCGTTTGG 59.248 47.826 0.00 0.00 0.00 3.28
225 226 3.292492 AAAAAGTCTCTCCCGTTTGGT 57.708 42.857 0.00 0.00 34.77 3.67
226 227 4.426736 AAAAAGTCTCTCCCGTTTGGTA 57.573 40.909 0.00 0.00 34.77 3.25
227 228 4.426736 AAAAGTCTCTCCCGTTTGGTAA 57.573 40.909 0.00 0.00 34.77 2.85
228 229 4.426736 AAAGTCTCTCCCGTTTGGTAAA 57.573 40.909 0.00 0.00 34.77 2.01
229 230 4.426736 AAGTCTCTCCCGTTTGGTAAAA 57.573 40.909 0.00 0.00 34.77 1.52
230 231 4.426736 AGTCTCTCCCGTTTGGTAAAAA 57.573 40.909 0.00 0.00 34.77 1.94
231 232 4.386711 AGTCTCTCCCGTTTGGTAAAAAG 58.613 43.478 0.00 0.00 34.77 2.27
232 233 3.501062 GTCTCTCCCGTTTGGTAAAAAGG 59.499 47.826 0.00 0.00 42.61 3.11
233 234 3.136992 TCTCTCCCGTTTGGTAAAAAGGT 59.863 43.478 3.15 0.00 41.73 3.50
234 235 3.479489 TCTCCCGTTTGGTAAAAAGGTC 58.521 45.455 3.15 0.00 41.73 3.85
235 236 3.136992 TCTCCCGTTTGGTAAAAAGGTCT 59.863 43.478 3.15 0.00 41.73 3.85
236 237 3.479489 TCCCGTTTGGTAAAAAGGTCTC 58.521 45.455 3.15 0.00 41.73 3.36
237 238 3.136992 TCCCGTTTGGTAAAAAGGTCTCT 59.863 43.478 3.15 0.00 41.73 3.10
238 239 4.347583 TCCCGTTTGGTAAAAAGGTCTCTA 59.652 41.667 3.15 0.00 41.73 2.43
239 240 5.065235 CCCGTTTGGTAAAAAGGTCTCTAA 58.935 41.667 3.15 0.00 41.73 2.10
240 241 5.180680 CCCGTTTGGTAAAAAGGTCTCTAAG 59.819 44.000 3.15 0.00 41.73 2.18
241 242 5.993441 CCGTTTGGTAAAAAGGTCTCTAAGA 59.007 40.000 0.00 0.00 39.34 2.10
242 243 6.147328 CCGTTTGGTAAAAAGGTCTCTAAGAG 59.853 42.308 0.00 0.00 39.34 2.85
243 244 6.147328 CGTTTGGTAAAAAGGTCTCTAAGAGG 59.853 42.308 0.00 0.00 0.00 3.69
244 245 5.757099 TGGTAAAAAGGTCTCTAAGAGGG 57.243 43.478 0.00 0.00 0.00 4.30
245 246 5.408824 TGGTAAAAAGGTCTCTAAGAGGGA 58.591 41.667 0.00 0.00 0.00 4.20
246 247 5.247792 TGGTAAAAAGGTCTCTAAGAGGGAC 59.752 44.000 1.71 1.71 0.00 4.46
248 249 6.013553 GGTAAAAAGGTCTCTAAGAGGGACTT 60.014 42.308 6.46 5.69 41.55 3.01
249 250 6.517013 AAAAAGGTCTCTAAGAGGGACTTT 57.483 37.500 6.46 10.35 41.55 2.66
250 251 6.517013 AAAAGGTCTCTAAGAGGGACTTTT 57.483 37.500 15.33 15.33 41.55 2.27
251 252 6.517013 AAAGGTCTCTAAGAGGGACTTTTT 57.483 37.500 9.99 7.07 41.55 1.94
252 253 5.748670 AGGTCTCTAAGAGGGACTTTTTC 57.251 43.478 6.46 0.00 41.55 2.29
253 254 5.407936 AGGTCTCTAAGAGGGACTTTTTCT 58.592 41.667 6.46 0.00 41.55 2.52
254 255 6.563163 AGGTCTCTAAGAGGGACTTTTTCTA 58.437 40.000 6.46 0.00 41.55 2.10
255 256 6.666113 AGGTCTCTAAGAGGGACTTTTTCTAG 59.334 42.308 6.46 0.00 41.55 2.43
256 257 6.438108 GGTCTCTAAGAGGGACTTTTTCTAGT 59.562 42.308 6.46 0.00 41.55 2.57
257 258 7.363181 GGTCTCTAAGAGGGACTTTTTCTAGTC 60.363 44.444 6.46 0.00 41.55 2.59
268 269 7.797038 GACTTTTTCTAGTCCCTACACAAAA 57.203 36.000 0.00 0.00 38.88 2.44
269 270 8.217131 GACTTTTTCTAGTCCCTACACAAAAA 57.783 34.615 0.00 0.00 38.88 1.94
288 289 4.465632 AAAAGTCCCTGGAAACAAACAC 57.534 40.909 0.00 0.00 42.06 3.32
289 290 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
290 291 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
291 292 0.105913 TCCCTGGAAACAAACACCCC 60.106 55.000 0.00 0.00 42.06 4.95
292 293 1.118965 CCCTGGAAACAAACACCCCC 61.119 60.000 0.00 0.00 42.06 5.40
299 300 5.656420 TGGAAACAAACACCCCCTTAATAT 58.344 37.500 0.00 0.00 37.44 1.28
303 304 5.530176 ACAAACACCCCCTTAATATCAGT 57.470 39.130 0.00 0.00 0.00 3.41
345 346 2.297597 GGGATCAGACGAAGATCGGATT 59.702 50.000 4.66 0.00 45.59 3.01
377 378 5.211266 TGTTGCTAAAATCCATACGTTCG 57.789 39.130 0.00 0.00 0.00 3.95
380 381 3.866910 TGCTAAAATCCATACGTTCGGAC 59.133 43.478 7.72 0.00 33.05 4.79
381 382 3.246936 GCTAAAATCCATACGTTCGGACC 59.753 47.826 7.72 0.00 33.05 4.46
406 407 9.285770 CCTTTTAGCTTTTCCGTTAAATCATAC 57.714 33.333 0.00 0.00 0.00 2.39
409 410 6.679327 AGCTTTTCCGTTAAATCATACTCC 57.321 37.500 0.00 0.00 0.00 3.85
410 411 5.589050 AGCTTTTCCGTTAAATCATACTCCC 59.411 40.000 0.00 0.00 0.00 4.30
411 412 5.589050 GCTTTTCCGTTAAATCATACTCCCT 59.411 40.000 0.00 0.00 0.00 4.20
412 413 6.238402 GCTTTTCCGTTAAATCATACTCCCTC 60.238 42.308 0.00 0.00 0.00 4.30
413 414 6.555463 TTTCCGTTAAATCATACTCCCTCT 57.445 37.500 0.00 0.00 0.00 3.69
414 415 7.664552 TTTCCGTTAAATCATACTCCCTCTA 57.335 36.000 0.00 0.00 0.00 2.43
415 416 7.850935 TTCCGTTAAATCATACTCCCTCTAT 57.149 36.000 0.00 0.00 0.00 1.98
416 417 7.850935 TCCGTTAAATCATACTCCCTCTATT 57.149 36.000 0.00 0.00 0.00 1.73
417 418 7.893658 TCCGTTAAATCATACTCCCTCTATTC 58.106 38.462 0.00 0.00 0.00 1.75
418 419 7.728981 TCCGTTAAATCATACTCCCTCTATTCT 59.271 37.037 0.00 0.00 0.00 2.40
419 420 8.368668 CCGTTAAATCATACTCCCTCTATTCTT 58.631 37.037 0.00 0.00 0.00 2.52
420 421 9.765795 CGTTAAATCATACTCCCTCTATTCTTT 57.234 33.333 0.00 0.00 0.00 2.52
431 432 8.875168 ACTCCCTCTATTCTTTGATATAAGGTG 58.125 37.037 0.00 0.00 0.00 4.00
432 433 8.798975 TCCCTCTATTCTTTGATATAAGGTGT 57.201 34.615 0.00 0.00 0.00 4.16
433 434 9.892444 TCCCTCTATTCTTTGATATAAGGTGTA 57.108 33.333 0.00 0.00 0.00 2.90
478 479 9.929722 TTCGAAATATAAGATGTATTGTGTTGC 57.070 29.630 0.00 0.00 0.00 4.17
479 480 9.103861 TCGAAATATAAGATGTATTGTGTTGCA 57.896 29.630 0.00 0.00 0.00 4.08
480 481 9.158364 CGAAATATAAGATGTATTGTGTTGCAC 57.842 33.333 0.00 0.00 34.56 4.57
481 482 9.450807 GAAATATAAGATGTATTGTGTTGCACC 57.549 33.333 0.00 0.00 32.73 5.01
482 483 8.518430 AATATAAGATGTATTGTGTTGCACCA 57.482 30.769 0.00 0.00 32.73 4.17
483 484 4.503741 AAGATGTATTGTGTTGCACCAC 57.496 40.909 7.55 7.55 32.73 4.16
484 485 3.754965 AGATGTATTGTGTTGCACCACT 58.245 40.909 15.86 0.00 36.30 4.00
485 486 3.753272 AGATGTATTGTGTTGCACCACTC 59.247 43.478 15.86 3.59 36.30 3.51
486 487 1.870402 TGTATTGTGTTGCACCACTCG 59.130 47.619 15.86 0.00 36.30 4.18
487 488 1.871039 GTATTGTGTTGCACCACTCGT 59.129 47.619 15.86 4.23 36.30 4.18
488 489 1.388547 ATTGTGTTGCACCACTCGTT 58.611 45.000 15.86 0.00 36.30 3.85
489 490 1.169577 TTGTGTTGCACCACTCGTTT 58.830 45.000 15.86 0.00 36.30 3.60
490 491 0.449786 TGTGTTGCACCACTCGTTTG 59.550 50.000 15.86 0.00 36.30 2.93
491 492 0.248458 GTGTTGCACCACTCGTTTGG 60.248 55.000 7.20 3.82 43.04 3.28
492 493 0.393132 TGTTGCACCACTCGTTTGGA 60.393 50.000 11.38 0.00 39.24 3.53
493 494 0.951558 GTTGCACCACTCGTTTGGAT 59.048 50.000 11.38 0.00 39.24 3.41
494 495 2.147958 GTTGCACCACTCGTTTGGATA 58.852 47.619 11.38 0.00 39.24 2.59
495 496 2.747446 GTTGCACCACTCGTTTGGATAT 59.253 45.455 11.38 0.00 39.24 1.63
496 497 3.066291 TGCACCACTCGTTTGGATATT 57.934 42.857 11.38 0.00 39.24 1.28
497 498 3.417101 TGCACCACTCGTTTGGATATTT 58.583 40.909 11.38 0.00 39.24 1.40
498 499 3.823873 TGCACCACTCGTTTGGATATTTT 59.176 39.130 11.38 0.00 39.24 1.82
499 500 4.279671 TGCACCACTCGTTTGGATATTTTT 59.720 37.500 11.38 0.00 39.24 1.94
552 553 9.750783 ATTATATCAGGCAAGCTCATCTATTTT 57.249 29.630 0.00 0.00 0.00 1.82
553 554 7.684937 ATATCAGGCAAGCTCATCTATTTTC 57.315 36.000 0.00 0.00 0.00 2.29
554 555 5.108187 TCAGGCAAGCTCATCTATTTTCT 57.892 39.130 0.00 0.00 0.00 2.52
555 556 5.121811 TCAGGCAAGCTCATCTATTTTCTC 58.878 41.667 0.00 0.00 0.00 2.87
556 557 4.880120 CAGGCAAGCTCATCTATTTTCTCA 59.120 41.667 0.00 0.00 0.00 3.27
557 558 5.531659 CAGGCAAGCTCATCTATTTTCTCAT 59.468 40.000 0.00 0.00 0.00 2.90
558 559 5.531659 AGGCAAGCTCATCTATTTTCTCATG 59.468 40.000 0.00 0.00 0.00 3.07
559 560 5.298777 GGCAAGCTCATCTATTTTCTCATGT 59.701 40.000 0.00 0.00 0.00 3.21
560 561 6.428799 GCAAGCTCATCTATTTTCTCATGTC 58.571 40.000 0.00 0.00 0.00 3.06
561 562 6.037940 GCAAGCTCATCTATTTTCTCATGTCA 59.962 38.462 0.00 0.00 0.00 3.58
562 563 7.414873 GCAAGCTCATCTATTTTCTCATGTCAA 60.415 37.037 0.00 0.00 0.00 3.18
563 564 8.622157 CAAGCTCATCTATTTTCTCATGTCAAT 58.378 33.333 0.00 0.00 0.00 2.57
564 565 8.749026 AGCTCATCTATTTTCTCATGTCAATT 57.251 30.769 0.00 0.00 0.00 2.32
565 566 9.842775 AGCTCATCTATTTTCTCATGTCAATTA 57.157 29.630 0.00 0.00 0.00 1.40
571 572 9.605275 TCTATTTTCTCATGTCAATTAGTCAGG 57.395 33.333 0.00 0.00 0.00 3.86
572 573 9.388506 CTATTTTCTCATGTCAATTAGTCAGGT 57.611 33.333 0.00 0.00 0.00 4.00
573 574 7.439157 TTTTCTCATGTCAATTAGTCAGGTG 57.561 36.000 0.00 0.00 0.00 4.00
574 575 5.745312 TCTCATGTCAATTAGTCAGGTGT 57.255 39.130 0.00 0.00 0.00 4.16
575 576 6.850752 TCTCATGTCAATTAGTCAGGTGTA 57.149 37.500 0.00 0.00 0.00 2.90
576 577 7.239763 TCTCATGTCAATTAGTCAGGTGTAA 57.760 36.000 0.00 0.00 0.00 2.41
577 578 7.851228 TCTCATGTCAATTAGTCAGGTGTAAT 58.149 34.615 0.00 0.00 0.00 1.89
578 579 7.981789 TCTCATGTCAATTAGTCAGGTGTAATC 59.018 37.037 0.00 0.00 0.00 1.75
579 580 7.851228 TCATGTCAATTAGTCAGGTGTAATCT 58.149 34.615 0.00 0.00 0.00 2.40
580 581 8.321353 TCATGTCAATTAGTCAGGTGTAATCTT 58.679 33.333 0.00 0.00 0.00 2.40
581 582 9.599866 CATGTCAATTAGTCAGGTGTAATCTTA 57.400 33.333 0.00 0.00 0.00 2.10
582 583 9.823647 ATGTCAATTAGTCAGGTGTAATCTTAG 57.176 33.333 0.00 0.00 0.00 2.18
583 584 7.764443 TGTCAATTAGTCAGGTGTAATCTTAGC 59.236 37.037 0.00 0.00 0.00 3.09
584 585 7.224949 GTCAATTAGTCAGGTGTAATCTTAGCC 59.775 40.741 0.00 0.00 0.00 3.93
585 586 6.808321 ATTAGTCAGGTGTAATCTTAGCCA 57.192 37.500 0.00 0.00 0.00 4.75
586 587 6.614694 TTAGTCAGGTGTAATCTTAGCCAA 57.385 37.500 0.00 0.00 0.00 4.52
587 588 5.499004 AGTCAGGTGTAATCTTAGCCAAA 57.501 39.130 0.00 0.00 0.00 3.28
588 589 5.876357 AGTCAGGTGTAATCTTAGCCAAAA 58.124 37.500 0.00 0.00 0.00 2.44
589 590 5.705905 AGTCAGGTGTAATCTTAGCCAAAAC 59.294 40.000 0.00 0.00 0.00 2.43
590 591 5.705905 GTCAGGTGTAATCTTAGCCAAAACT 59.294 40.000 0.00 0.00 0.00 2.66
591 592 6.206829 GTCAGGTGTAATCTTAGCCAAAACTT 59.793 38.462 0.00 0.00 0.00 2.66
592 593 6.206634 TCAGGTGTAATCTTAGCCAAAACTTG 59.793 38.462 0.00 0.00 0.00 3.16
593 594 6.016276 CAGGTGTAATCTTAGCCAAAACTTGT 60.016 38.462 0.00 0.00 0.00 3.16
594 595 6.016276 AGGTGTAATCTTAGCCAAAACTTGTG 60.016 38.462 0.00 0.00 0.00 3.33
595 596 6.016610 GGTGTAATCTTAGCCAAAACTTGTGA 60.017 38.462 0.00 0.00 0.00 3.58
596 597 7.422399 GTGTAATCTTAGCCAAAACTTGTGAA 58.578 34.615 0.00 0.00 0.00 3.18
597 598 7.918562 GTGTAATCTTAGCCAAAACTTGTGAAA 59.081 33.333 0.00 0.00 0.00 2.69
598 599 8.637986 TGTAATCTTAGCCAAAACTTGTGAAAT 58.362 29.630 0.00 0.00 0.00 2.17
599 600 9.476202 GTAATCTTAGCCAAAACTTGTGAAATT 57.524 29.630 0.00 0.00 0.00 1.82
600 601 8.962884 AATCTTAGCCAAAACTTGTGAAATTT 57.037 26.923 0.00 0.00 0.00 1.82
601 602 8.962884 ATCTTAGCCAAAACTTGTGAAATTTT 57.037 26.923 0.00 0.00 0.00 1.82
602 603 8.785329 TCTTAGCCAAAACTTGTGAAATTTTT 57.215 26.923 0.00 0.00 0.00 1.94
603 604 8.878769 TCTTAGCCAAAACTTGTGAAATTTTTC 58.121 29.630 0.00 0.00 37.69 2.29
604 605 6.435430 AGCCAAAACTTGTGAAATTTTTCC 57.565 33.333 0.00 0.00 36.36 3.13
605 606 6.179756 AGCCAAAACTTGTGAAATTTTTCCT 58.820 32.000 0.00 0.00 36.36 3.36
606 607 6.316140 AGCCAAAACTTGTGAAATTTTTCCTC 59.684 34.615 0.00 0.00 36.36 3.71
607 608 6.458206 GCCAAAACTTGTGAAATTTTTCCTCC 60.458 38.462 0.00 0.00 36.36 4.30
608 609 6.597280 CCAAAACTTGTGAAATTTTTCCTCCA 59.403 34.615 0.00 0.00 36.36 3.86
609 610 7.282901 CCAAAACTTGTGAAATTTTTCCTCCAT 59.717 33.333 0.00 0.00 36.36 3.41
610 611 7.790823 AAACTTGTGAAATTTTTCCTCCATG 57.209 32.000 0.00 0.00 36.36 3.66
611 612 6.484364 ACTTGTGAAATTTTTCCTCCATGT 57.516 33.333 0.00 2.04 36.36 3.21
612 613 6.282930 ACTTGTGAAATTTTTCCTCCATGTG 58.717 36.000 0.00 0.00 36.36 3.21
613 614 4.630111 TGTGAAATTTTTCCTCCATGTGC 58.370 39.130 0.00 0.00 36.36 4.57
614 615 3.674753 GTGAAATTTTTCCTCCATGTGCG 59.325 43.478 0.00 0.00 36.36 5.34
615 616 3.320541 TGAAATTTTTCCTCCATGTGCGT 59.679 39.130 0.00 0.00 36.36 5.24
616 617 4.202202 TGAAATTTTTCCTCCATGTGCGTT 60.202 37.500 0.00 0.00 36.36 4.84
617 618 4.335400 AATTTTTCCTCCATGTGCGTTT 57.665 36.364 0.00 0.00 0.00 3.60
618 619 3.810310 TTTTTCCTCCATGTGCGTTTT 57.190 38.095 0.00 0.00 0.00 2.43
619 620 3.810310 TTTTCCTCCATGTGCGTTTTT 57.190 38.095 0.00 0.00 0.00 1.94
639 640 6.986904 TTTTTAATTTCCGTGCCAAAAACT 57.013 29.167 0.00 0.00 0.00 2.66
641 642 8.664211 TTTTTAATTTCCGTGCCAAAAACTAT 57.336 26.923 0.00 0.00 0.00 2.12
642 643 9.760077 TTTTTAATTTCCGTGCCAAAAACTATA 57.240 25.926 0.00 0.00 0.00 1.31
643 644 8.745464 TTTAATTTCCGTGCCAAAAACTATAC 57.255 30.769 0.00 0.00 0.00 1.47
644 645 4.407496 TTTCCGTGCCAAAAACTATACG 57.593 40.909 0.00 0.00 0.00 3.06
645 646 1.733360 TCCGTGCCAAAAACTATACGC 59.267 47.619 0.00 0.00 0.00 4.42
646 647 1.202098 CCGTGCCAAAAACTATACGCC 60.202 52.381 0.00 0.00 0.00 5.68
647 648 1.202098 CGTGCCAAAAACTATACGCCC 60.202 52.381 0.00 0.00 0.00 6.13
648 649 2.089201 GTGCCAAAAACTATACGCCCT 58.911 47.619 0.00 0.00 0.00 5.19
649 650 3.272581 GTGCCAAAAACTATACGCCCTA 58.727 45.455 0.00 0.00 0.00 3.53
650 651 3.881089 GTGCCAAAAACTATACGCCCTAT 59.119 43.478 0.00 0.00 0.00 2.57
651 652 5.058490 GTGCCAAAAACTATACGCCCTATA 58.942 41.667 0.00 0.00 0.00 1.31
652 653 5.704053 GTGCCAAAAACTATACGCCCTATAT 59.296 40.000 0.00 0.00 0.00 0.86
653 654 6.206048 GTGCCAAAAACTATACGCCCTATATT 59.794 38.462 0.00 0.00 0.00 1.28
654 655 6.773685 TGCCAAAAACTATACGCCCTATATTT 59.226 34.615 0.00 0.00 0.00 1.40
655 656 7.937942 TGCCAAAAACTATACGCCCTATATTTA 59.062 33.333 0.00 0.00 0.00 1.40
656 657 8.448615 GCCAAAAACTATACGCCCTATATTTAG 58.551 37.037 0.00 0.00 0.00 1.85
657 658 9.715121 CCAAAAACTATACGCCCTATATTTAGA 57.285 33.333 0.00 0.00 0.00 2.10
666 667 9.841295 ATACGCCCTATATTTAGAAACAAAGAA 57.159 29.630 0.00 0.00 0.00 2.52
667 668 8.570068 ACGCCCTATATTTAGAAACAAAGAAA 57.430 30.769 0.00 0.00 0.00 2.52
668 669 8.674607 ACGCCCTATATTTAGAAACAAAGAAAG 58.325 33.333 0.00 0.00 0.00 2.62
669 670 8.674607 CGCCCTATATTTAGAAACAAAGAAAGT 58.325 33.333 0.00 0.00 0.00 2.66
760 762 5.962433 TGCTGTTGTACTATCTCAGTTACC 58.038 41.667 0.00 0.00 38.80 2.85
821 823 3.447586 AGCAGCTATAAGGAGAAACGTGA 59.552 43.478 0.00 0.00 0.00 4.35
875 910 2.179764 GCATAAGTTGCCTGCCGAA 58.820 52.632 0.00 0.00 46.15 4.30
876 911 0.099436 GCATAAGTTGCCTGCCGAAG 59.901 55.000 0.00 0.00 46.15 3.79
877 912 1.453155 CATAAGTTGCCTGCCGAAGT 58.547 50.000 0.00 0.00 0.00 3.01
878 913 1.131126 CATAAGTTGCCTGCCGAAGTG 59.869 52.381 0.00 0.00 0.00 3.16
879 914 1.234615 TAAGTTGCCTGCCGAAGTGC 61.235 55.000 0.00 0.00 0.00 4.40
880 915 4.043200 GTTGCCTGCCGAAGTGCC 62.043 66.667 0.00 0.00 0.00 5.01
974 1010 0.664466 CGCTCAGAGTTGTTCGCTCA 60.664 55.000 0.00 0.00 35.55 4.26
1005 1042 3.359695 TCTAACCAAGTAACCATGGCC 57.640 47.619 13.04 0.00 40.51 5.36
1047 1084 1.535462 CTCGTGGTGACCATGGTTTTC 59.465 52.381 22.71 12.12 40.65 2.29
1057 1094 0.322456 CATGGTTTTCCTCCTCGCCA 60.322 55.000 0.00 0.00 41.38 5.69
1086 1123 0.943835 CGAGTGTCGGCAACATCACA 60.944 55.000 0.00 0.00 40.80 3.58
1087 1124 0.792640 GAGTGTCGGCAACATCACAG 59.207 55.000 0.00 0.00 40.80 3.66
1168 1205 2.048222 CGCAGCACTTCGGGAAGA 60.048 61.111 14.94 0.00 40.79 2.87
1169 1206 1.448540 CGCAGCACTTCGGGAAGAT 60.449 57.895 14.94 0.00 40.79 2.40
1190 1227 1.984570 TCCCAAGAGGAGGAGCACG 60.985 63.158 0.00 0.00 40.93 5.34
1191 1228 2.125350 CCAAGAGGAGGAGCACGC 60.125 66.667 0.00 0.00 36.89 5.34
1296 1333 2.045926 GACACCGCCCTCAGCAAT 60.046 61.111 0.00 0.00 44.04 3.56
1300 1337 2.270205 CCGCCCTCAGCAATGACT 59.730 61.111 0.00 0.00 44.04 3.41
1303 1340 1.148157 CGCCCTCAGCAATGACTACG 61.148 60.000 0.00 0.00 44.04 3.51
1307 1344 1.284657 CTCAGCAATGACTACGGCAG 58.715 55.000 0.00 0.00 0.00 4.85
1374 1411 2.755650 CGGAGAAAATACCCAGATCCG 58.244 52.381 0.00 0.00 41.80 4.18
1600 1637 2.235898 GCCAAGGCATTCCAAACCATTA 59.764 45.455 6.14 0.00 41.49 1.90
1618 1655 1.667236 TAAGCTTGGTGATGGCATCG 58.333 50.000 21.65 8.77 0.00 3.84
1770 1807 2.999063 CCCGTCACGGTAGGGGTT 60.999 66.667 16.87 0.00 46.80 4.11
1812 1849 1.042003 TACAATACCGCGGTGGCCTA 61.042 55.000 40.02 21.30 43.94 3.93
1842 1879 0.824109 CCTGCAATACCACTCTCGGA 59.176 55.000 0.00 0.00 0.00 4.55
1883 1920 2.433239 GGTATGGAACTACCGGACACAT 59.567 50.000 9.46 6.27 42.61 3.21
1897 1934 1.216977 CACATCGACCCTTACGGCA 59.783 57.895 0.00 0.00 33.26 5.69
1926 1963 1.549170 GGAGTCGACTTTTGGCTCCTA 59.451 52.381 21.08 0.00 41.68 2.94
1977 2014 2.970639 GGCTATATGCGGCTCCGA 59.029 61.111 13.11 0.00 44.05 4.55
2049 2086 3.452264 CCTATCCGATCCATTCCTATGCA 59.548 47.826 0.00 0.00 0.00 3.96
2139 2176 8.185506 TCAGTCCCATAATATAAGAGCGTTTA 57.814 34.615 0.00 0.00 0.00 2.01
2153 2190 6.624352 AGAGCGTTTATGACATTAATGCAT 57.376 33.333 25.26 21.15 36.50 3.96
2167 2204 5.820926 TTAATGCATTGACAAAAACGCTC 57.179 34.783 22.27 0.00 0.00 5.03
2209 2247 8.431910 AGGGAGTAGTAAAGTTAGTGATGAAA 57.568 34.615 0.00 0.00 0.00 2.69
2210 2248 9.047947 AGGGAGTAGTAAAGTTAGTGATGAAAT 57.952 33.333 0.00 0.00 0.00 2.17
2212 2250 9.871238 GGAGTAGTAAAGTTAGTGATGAAATGA 57.129 33.333 0.00 0.00 0.00 2.57
2280 2318 8.718656 AGAATATAAGTTGGTAGCCAGAGATTT 58.281 33.333 0.00 0.00 33.81 2.17
2408 2446 2.302157 CTCCACCCCTCGTTATTATCCC 59.698 54.545 0.00 0.00 0.00 3.85
2418 2456 3.968649 TCGTTATTATCCCTAAGCCACCA 59.031 43.478 0.00 0.00 0.00 4.17
2489 2527 2.752354 CGCTCCATATTCCTCGATCTCT 59.248 50.000 0.00 0.00 0.00 3.10
2621 2659 2.098870 GCGAAGAAAACGACAACACAC 58.901 47.619 0.00 0.00 0.00 3.82
2639 2677 2.032681 ACCAACGCCTCCTTCTGC 59.967 61.111 0.00 0.00 0.00 4.26
2719 2757 0.455295 CGGTTTTTGCACACACGTGT 60.455 50.000 17.22 17.22 45.50 4.49
2725 2763 1.573026 TTGCACACACGTGTTACGAT 58.427 45.000 20.79 0.00 46.05 3.73
2733 2771 0.601576 ACGTGTTACGATGGCAGCAA 60.602 50.000 8.48 0.00 46.05 3.91
2756 2794 1.808411 GTTTGCGATGACCTGAGGAA 58.192 50.000 4.99 0.00 0.00 3.36
2832 2870 2.410262 CGACGAAATGTTCTGTGAGCAC 60.410 50.000 0.00 0.00 0.00 4.40
3002 3041 1.203087 TCGGTAGGAGGAAGTGGTTGA 60.203 52.381 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.132144 AGGGACTTTTTAGTCTCTGGAAACA 59.868 40.000 6.89 0.00 46.88 2.83
1 2 5.622180 AGGGACTTTTTAGTCTCTGGAAAC 58.378 41.667 6.89 0.00 46.88 2.78
2 3 5.906772 AGGGACTTTTTAGTCTCTGGAAA 57.093 39.130 6.89 0.00 46.88 3.13
3 4 6.082707 ACTAGGGACTTTTTAGTCTCTGGAA 58.917 40.000 20.87 1.77 46.69 3.53
4 5 5.652324 ACTAGGGACTTTTTAGTCTCTGGA 58.348 41.667 20.87 2.39 46.69 3.86
8 9 5.024785 AGGGACTAGGGACTTTTTAGTCTC 58.975 45.833 9.84 6.72 42.56 3.36
9 10 5.026093 AGGGACTAGGGACTTTTTAGTCT 57.974 43.478 9.84 0.00 41.77 3.24
10 11 5.338219 GGAAGGGACTAGGGACTTTTTAGTC 60.338 48.000 0.00 3.01 38.49 2.59
11 12 4.535294 GGAAGGGACTAGGGACTTTTTAGT 59.465 45.833 0.00 0.00 38.49 2.24
12 13 4.783763 AGGAAGGGACTAGGGACTTTTTAG 59.216 45.833 0.00 0.00 38.49 1.85
13 14 4.771338 AGGAAGGGACTAGGGACTTTTTA 58.229 43.478 0.00 0.00 38.49 1.52
14 15 3.610260 AGGAAGGGACTAGGGACTTTTT 58.390 45.455 0.00 0.00 38.49 1.94
15 16 3.293215 AGGAAGGGACTAGGGACTTTT 57.707 47.619 0.00 0.00 38.49 2.27
16 17 3.601537 TCTAGGAAGGGACTAGGGACTTT 59.398 47.826 0.00 0.00 38.49 2.66
17 18 3.205733 CTCTAGGAAGGGACTAGGGACTT 59.794 52.174 0.00 0.00 40.69 3.01
18 19 2.787035 CTCTAGGAAGGGACTAGGGACT 59.213 54.545 0.00 0.00 40.69 3.85
19 20 2.158430 CCTCTAGGAAGGGACTAGGGAC 60.158 59.091 1.08 0.00 40.69 4.46
20 21 2.145298 CCTCTAGGAAGGGACTAGGGA 58.855 57.143 1.08 0.00 40.69 4.20
21 22 1.860906 ACCTCTAGGAAGGGACTAGGG 59.139 57.143 2.23 0.00 41.04 3.53
22 23 3.691698 AACCTCTAGGAAGGGACTAGG 57.308 52.381 2.23 0.00 41.04 3.02
23 24 8.779096 TTTAATAACCTCTAGGAAGGGACTAG 57.221 38.462 2.23 0.00 41.04 2.57
24 25 9.155785 CATTTAATAACCTCTAGGAAGGGACTA 57.844 37.037 2.23 0.00 41.04 2.59
25 26 7.849904 TCATTTAATAACCTCTAGGAAGGGACT 59.150 37.037 2.23 0.00 41.04 3.85
26 27 7.932491 GTCATTTAATAACCTCTAGGAAGGGAC 59.068 40.741 2.23 0.00 41.04 4.46
27 28 7.072076 GGTCATTTAATAACCTCTAGGAAGGGA 59.928 40.741 2.23 0.00 41.04 4.20
28 29 7.147373 TGGTCATTTAATAACCTCTAGGAAGGG 60.147 40.741 2.23 0.00 41.04 3.95
29 30 7.802117 TGGTCATTTAATAACCTCTAGGAAGG 58.198 38.462 2.23 0.00 42.55 3.46
30 31 9.277783 CATGGTCATTTAATAACCTCTAGGAAG 57.722 37.037 2.23 0.00 38.94 3.46
31 32 8.778059 ACATGGTCATTTAATAACCTCTAGGAA 58.222 33.333 2.23 0.00 38.94 3.36
32 33 8.331931 ACATGGTCATTTAATAACCTCTAGGA 57.668 34.615 2.23 0.00 38.94 2.94
33 34 8.840321 CAACATGGTCATTTAATAACCTCTAGG 58.160 37.037 0.00 0.00 42.17 3.02
34 35 8.345565 GCAACATGGTCATTTAATAACCTCTAG 58.654 37.037 0.00 0.00 34.05 2.43
35 36 8.052748 AGCAACATGGTCATTTAATAACCTCTA 58.947 33.333 0.00 0.00 34.05 2.43
36 37 6.891908 AGCAACATGGTCATTTAATAACCTCT 59.108 34.615 0.00 0.00 34.05 3.69
37 38 7.100458 AGCAACATGGTCATTTAATAACCTC 57.900 36.000 0.00 0.00 34.05 3.85
38 39 6.096846 GGAGCAACATGGTCATTTAATAACCT 59.903 38.462 11.19 0.00 45.96 3.50
39 40 6.096846 AGGAGCAACATGGTCATTTAATAACC 59.903 38.462 11.19 0.00 45.96 2.85
40 41 7.100458 AGGAGCAACATGGTCATTTAATAAC 57.900 36.000 11.19 0.00 45.96 1.89
41 42 8.052748 ACTAGGAGCAACATGGTCATTTAATAA 58.947 33.333 11.19 0.00 45.96 1.40
42 43 7.573710 ACTAGGAGCAACATGGTCATTTAATA 58.426 34.615 11.19 0.00 45.96 0.98
43 44 6.426587 ACTAGGAGCAACATGGTCATTTAAT 58.573 36.000 11.19 0.00 45.96 1.40
44 45 5.815581 ACTAGGAGCAACATGGTCATTTAA 58.184 37.500 11.19 0.00 45.96 1.52
45 46 5.435686 ACTAGGAGCAACATGGTCATTTA 57.564 39.130 11.19 1.25 45.96 1.40
46 47 4.307032 ACTAGGAGCAACATGGTCATTT 57.693 40.909 11.19 0.23 45.96 2.32
47 48 5.636903 ATACTAGGAGCAACATGGTCATT 57.363 39.130 11.19 2.38 45.96 2.57
48 49 6.942163 ATATACTAGGAGCAACATGGTCAT 57.058 37.500 11.19 6.88 45.96 3.06
49 50 7.238710 TCTATATACTAGGAGCAACATGGTCA 58.761 38.462 11.19 0.00 45.96 4.02
50 51 7.704578 TCTATATACTAGGAGCAACATGGTC 57.295 40.000 0.00 1.06 43.63 4.02
51 52 8.492415 TTTCTATATACTAGGAGCAACATGGT 57.508 34.615 0.00 0.00 0.00 3.55
52 53 9.429359 CTTTTCTATATACTAGGAGCAACATGG 57.571 37.037 0.00 0.00 0.00 3.66
53 54 9.988815 ACTTTTCTATATACTAGGAGCAACATG 57.011 33.333 0.00 0.00 0.00 3.21
70 71 9.744468 GGTGTTGTTTGATTGTTACTTTTCTAT 57.256 29.630 0.00 0.00 0.00 1.98
71 72 8.740906 TGGTGTTGTTTGATTGTTACTTTTCTA 58.259 29.630 0.00 0.00 0.00 2.10
72 73 7.607250 TGGTGTTGTTTGATTGTTACTTTTCT 58.393 30.769 0.00 0.00 0.00 2.52
73 74 7.820044 TGGTGTTGTTTGATTGTTACTTTTC 57.180 32.000 0.00 0.00 0.00 2.29
74 75 7.279758 CCATGGTGTTGTTTGATTGTTACTTTT 59.720 33.333 2.57 0.00 0.00 2.27
75 76 6.760770 CCATGGTGTTGTTTGATTGTTACTTT 59.239 34.615 2.57 0.00 0.00 2.66
76 77 6.279882 CCATGGTGTTGTTTGATTGTTACTT 58.720 36.000 2.57 0.00 0.00 2.24
77 78 5.221422 CCCATGGTGTTGTTTGATTGTTACT 60.221 40.000 11.73 0.00 0.00 2.24
78 79 4.987912 CCCATGGTGTTGTTTGATTGTTAC 59.012 41.667 11.73 0.00 0.00 2.50
79 80 4.039730 CCCCATGGTGTTGTTTGATTGTTA 59.960 41.667 11.73 0.00 0.00 2.41
80 81 3.181456 CCCCATGGTGTTGTTTGATTGTT 60.181 43.478 11.73 0.00 0.00 2.83
81 82 2.368221 CCCCATGGTGTTGTTTGATTGT 59.632 45.455 11.73 0.00 0.00 2.71
82 83 2.368221 ACCCCATGGTGTTGTTTGATTG 59.632 45.455 11.73 0.00 45.58 2.67
83 84 2.688477 ACCCCATGGTGTTGTTTGATT 58.312 42.857 11.73 0.00 45.58 2.57
84 85 2.397044 ACCCCATGGTGTTGTTTGAT 57.603 45.000 11.73 0.00 45.58 2.57
85 86 3.935371 ACCCCATGGTGTTGTTTGA 57.065 47.368 11.73 0.00 45.58 2.69
96 97 2.277672 TATTGGCCCGTCACCCCATG 62.278 60.000 0.00 0.00 0.00 3.66
97 98 1.994885 CTATTGGCCCGTCACCCCAT 61.995 60.000 0.00 0.00 0.00 4.00
98 99 2.611172 TATTGGCCCGTCACCCCA 60.611 61.111 0.00 0.00 0.00 4.96
99 100 2.192175 CTATTGGCCCGTCACCCC 59.808 66.667 0.00 0.00 0.00 4.95
100 101 2.192175 CCTATTGGCCCGTCACCC 59.808 66.667 0.00 0.00 0.00 4.61
101 102 1.451387 CACCTATTGGCCCGTCACC 60.451 63.158 0.00 0.00 36.63 4.02
102 103 2.112815 GCACCTATTGGCCCGTCAC 61.113 63.158 0.00 0.00 36.63 3.67
103 104 1.920734 ATGCACCTATTGGCCCGTCA 61.921 55.000 0.00 0.00 36.63 4.35
104 105 1.152963 ATGCACCTATTGGCCCGTC 60.153 57.895 0.00 0.00 36.63 4.79
105 106 1.453745 CATGCACCTATTGGCCCGT 60.454 57.895 0.00 0.00 36.63 5.28
106 107 2.195567 CCATGCACCTATTGGCCCG 61.196 63.158 0.00 0.00 36.63 6.13
107 108 0.825010 CTCCATGCACCTATTGGCCC 60.825 60.000 0.00 0.00 36.63 5.80
108 109 0.183492 TCTCCATGCACCTATTGGCC 59.817 55.000 0.00 0.00 36.63 5.36
109 110 1.602311 CTCTCCATGCACCTATTGGC 58.398 55.000 0.00 0.00 36.63 4.52
110 111 1.816961 GCCTCTCCATGCACCTATTGG 60.817 57.143 0.00 0.00 39.83 3.16
111 112 1.134007 TGCCTCTCCATGCACCTATTG 60.134 52.381 0.00 0.00 31.31 1.90
112 113 1.216064 TGCCTCTCCATGCACCTATT 58.784 50.000 0.00 0.00 31.31 1.73
113 114 1.442773 ATGCCTCTCCATGCACCTAT 58.557 50.000 0.00 0.00 40.88 2.57
114 115 1.134007 CAATGCCTCTCCATGCACCTA 60.134 52.381 0.00 0.00 40.88 3.08
115 116 0.395311 CAATGCCTCTCCATGCACCT 60.395 55.000 0.00 0.00 40.88 4.00
116 117 0.682209 ACAATGCCTCTCCATGCACC 60.682 55.000 0.00 0.00 40.88 5.01
117 118 1.135199 CAACAATGCCTCTCCATGCAC 60.135 52.381 0.00 0.00 40.88 4.57
118 119 1.179152 CAACAATGCCTCTCCATGCA 58.821 50.000 0.00 0.00 42.52 3.96
119 120 0.458669 CCAACAATGCCTCTCCATGC 59.541 55.000 0.00 0.00 0.00 4.06
120 121 2.133281 TCCAACAATGCCTCTCCATG 57.867 50.000 0.00 0.00 0.00 3.66
121 122 2.905415 TTCCAACAATGCCTCTCCAT 57.095 45.000 0.00 0.00 0.00 3.41
122 123 2.673775 TTTCCAACAATGCCTCTCCA 57.326 45.000 0.00 0.00 0.00 3.86
123 124 2.893489 ACTTTTCCAACAATGCCTCTCC 59.107 45.455 0.00 0.00 0.00 3.71
124 125 3.057245 GGACTTTTCCAACAATGCCTCTC 60.057 47.826 0.00 0.00 42.30 3.20
125 126 2.893489 GGACTTTTCCAACAATGCCTCT 59.107 45.455 0.00 0.00 42.30 3.69
126 127 2.029020 GGGACTTTTCCAACAATGCCTC 60.029 50.000 0.00 0.00 44.98 4.70
127 128 1.970640 GGGACTTTTCCAACAATGCCT 59.029 47.619 0.00 0.00 44.98 4.75
128 129 1.691434 TGGGACTTTTCCAACAATGCC 59.309 47.619 0.00 0.00 44.98 4.40
129 130 3.467374 TTGGGACTTTTCCAACAATGC 57.533 42.857 0.00 0.00 44.98 3.56
130 131 5.523552 GTCTTTTGGGACTTTTCCAACAATG 59.476 40.000 0.00 0.00 44.98 2.82
131 132 5.425217 AGTCTTTTGGGACTTTTCCAACAAT 59.575 36.000 0.00 0.00 44.98 2.71
132 133 4.775253 AGTCTTTTGGGACTTTTCCAACAA 59.225 37.500 0.00 0.00 44.98 2.83
133 134 4.349365 AGTCTTTTGGGACTTTTCCAACA 58.651 39.130 0.00 0.00 44.98 3.33
134 135 4.645136 AGAGTCTTTTGGGACTTTTCCAAC 59.355 41.667 0.00 0.00 45.32 3.77
135 136 4.867086 AGAGTCTTTTGGGACTTTTCCAA 58.133 39.130 0.00 0.00 45.32 3.53
136 137 4.461198 GAGAGTCTTTTGGGACTTTTCCA 58.539 43.478 0.00 0.00 45.32 3.53
137 138 3.821600 GGAGAGTCTTTTGGGACTTTTCC 59.178 47.826 0.00 10.81 45.32 3.13
138 139 4.720046 AGGAGAGTCTTTTGGGACTTTTC 58.280 43.478 0.00 0.00 45.32 2.29
139 140 4.797912 AGGAGAGTCTTTTGGGACTTTT 57.202 40.909 0.00 0.00 45.32 2.27
140 141 4.166144 TCAAGGAGAGTCTTTTGGGACTTT 59.834 41.667 14.67 0.00 45.32 2.66
141 142 3.716872 TCAAGGAGAGTCTTTTGGGACTT 59.283 43.478 14.67 1.89 45.32 3.01
143 144 3.325135 TCTCAAGGAGAGTCTTTTGGGAC 59.675 47.826 13.85 0.00 44.98 4.46
144 145 3.587498 TCTCAAGGAGAGTCTTTTGGGA 58.413 45.455 13.85 13.85 44.98 4.37
155 156 6.678568 AAATGAAGAAGACTCTCAAGGAGA 57.321 37.500 0.00 0.00 44.45 3.71
156 157 9.097257 GATTAAATGAAGAAGACTCTCAAGGAG 57.903 37.037 0.00 0.00 46.87 3.69
157 158 8.043710 GGATTAAATGAAGAAGACTCTCAAGGA 58.956 37.037 0.00 0.00 0.00 3.36
158 159 7.281999 GGGATTAAATGAAGAAGACTCTCAAGG 59.718 40.741 0.00 0.00 0.00 3.61
159 160 7.826252 TGGGATTAAATGAAGAAGACTCTCAAG 59.174 37.037 0.00 0.00 0.00 3.02
160 161 7.689299 TGGGATTAAATGAAGAAGACTCTCAA 58.311 34.615 0.00 0.00 0.00 3.02
161 162 7.257790 TGGGATTAAATGAAGAAGACTCTCA 57.742 36.000 0.00 0.00 0.00 3.27
162 163 8.567285 TTTGGGATTAAATGAAGAAGACTCTC 57.433 34.615 0.00 0.00 0.00 3.20
163 164 8.964772 CATTTGGGATTAAATGAAGAAGACTCT 58.035 33.333 5.52 0.00 46.13 3.24
164 165 8.743714 ACATTTGGGATTAAATGAAGAAGACTC 58.256 33.333 15.67 0.00 46.13 3.36
165 166 8.655935 ACATTTGGGATTAAATGAAGAAGACT 57.344 30.769 15.67 0.00 46.13 3.24
166 167 8.743714 AGACATTTGGGATTAAATGAAGAAGAC 58.256 33.333 15.67 2.12 46.13 3.01
167 168 8.884124 AGACATTTGGGATTAAATGAAGAAGA 57.116 30.769 15.67 0.00 46.13 2.87
169 170 9.753674 ACTAGACATTTGGGATTAAATGAAGAA 57.246 29.630 15.67 1.34 46.13 2.52
170 171 9.753674 AACTAGACATTTGGGATTAAATGAAGA 57.246 29.630 15.67 2.51 46.13 2.87
176 177 9.457436 GGACTAAACTAGACATTTGGGATTAAA 57.543 33.333 0.00 0.00 0.00 1.52
177 178 8.050930 GGGACTAAACTAGACATTTGGGATTAA 58.949 37.037 0.00 0.00 0.00 1.40
178 179 7.404980 AGGGACTAAACTAGACATTTGGGATTA 59.595 37.037 0.00 0.00 36.02 1.75
179 180 6.217693 AGGGACTAAACTAGACATTTGGGATT 59.782 38.462 0.00 0.00 36.02 3.01
180 181 5.731678 AGGGACTAAACTAGACATTTGGGAT 59.268 40.000 0.00 0.00 36.02 3.85
181 182 5.098663 AGGGACTAAACTAGACATTTGGGA 58.901 41.667 0.00 0.00 36.02 4.37
182 183 5.437191 AGGGACTAAACTAGACATTTGGG 57.563 43.478 0.00 0.00 36.02 4.12
197 198 4.021916 CGGGAGAGACTTTTTAGGGACTA 58.978 47.826 0.00 0.00 41.75 2.59
198 199 2.832733 CGGGAGAGACTTTTTAGGGACT 59.167 50.000 0.00 0.00 46.37 3.85
199 200 2.566279 ACGGGAGAGACTTTTTAGGGAC 59.434 50.000 0.00 0.00 0.00 4.46
200 201 2.898662 ACGGGAGAGACTTTTTAGGGA 58.101 47.619 0.00 0.00 0.00 4.20
201 202 3.697619 AACGGGAGAGACTTTTTAGGG 57.302 47.619 0.00 0.00 0.00 3.53
202 203 3.751698 CCAAACGGGAGAGACTTTTTAGG 59.248 47.826 0.00 0.00 40.01 2.69
203 204 4.386711 ACCAAACGGGAGAGACTTTTTAG 58.613 43.478 0.00 0.00 41.15 1.85
204 205 4.426736 ACCAAACGGGAGAGACTTTTTA 57.573 40.909 0.00 0.00 41.15 1.52
205 206 3.292492 ACCAAACGGGAGAGACTTTTT 57.708 42.857 0.00 0.00 41.15 1.94
206 207 4.426736 TTACCAAACGGGAGAGACTTTT 57.573 40.909 0.00 0.00 41.15 2.27
207 208 4.426736 TTTACCAAACGGGAGAGACTTT 57.573 40.909 0.00 0.00 41.15 2.66
208 209 4.426736 TTTTACCAAACGGGAGAGACTT 57.573 40.909 0.00 0.00 41.15 3.01
209 210 4.386711 CTTTTTACCAAACGGGAGAGACT 58.613 43.478 0.00 0.00 41.15 3.24
210 211 3.501062 CCTTTTTACCAAACGGGAGAGAC 59.499 47.826 0.00 0.00 41.15 3.36
211 212 3.136992 ACCTTTTTACCAAACGGGAGAGA 59.863 43.478 0.00 0.00 41.15 3.10
212 213 3.483421 ACCTTTTTACCAAACGGGAGAG 58.517 45.455 0.00 0.00 41.15 3.20
213 214 3.136992 AGACCTTTTTACCAAACGGGAGA 59.863 43.478 0.00 0.00 41.15 3.71
214 215 3.483421 AGACCTTTTTACCAAACGGGAG 58.517 45.455 0.00 0.00 41.15 4.30
215 216 3.136992 AGAGACCTTTTTACCAAACGGGA 59.863 43.478 0.00 0.00 41.15 5.14
216 217 3.483421 AGAGACCTTTTTACCAAACGGG 58.517 45.455 0.00 0.00 44.81 5.28
217 218 5.993441 TCTTAGAGACCTTTTTACCAAACGG 59.007 40.000 0.00 0.00 37.33 4.44
218 219 6.147328 CCTCTTAGAGACCTTTTTACCAAACG 59.853 42.308 11.32 0.00 0.00 3.60
219 220 6.430308 CCCTCTTAGAGACCTTTTTACCAAAC 59.570 42.308 11.32 0.00 0.00 2.93
220 221 6.330778 TCCCTCTTAGAGACCTTTTTACCAAA 59.669 38.462 11.32 0.00 0.00 3.28
221 222 5.847817 TCCCTCTTAGAGACCTTTTTACCAA 59.152 40.000 11.32 0.00 0.00 3.67
222 223 5.247792 GTCCCTCTTAGAGACCTTTTTACCA 59.752 44.000 11.32 0.00 0.00 3.25
223 224 5.484644 AGTCCCTCTTAGAGACCTTTTTACC 59.515 44.000 11.32 0.00 0.00 2.85
224 225 6.608539 AGTCCCTCTTAGAGACCTTTTTAC 57.391 41.667 11.32 0.00 0.00 2.01
225 226 7.628501 AAAGTCCCTCTTAGAGACCTTTTTA 57.371 36.000 11.32 0.00 35.02 1.52
226 227 6.517013 AAAGTCCCTCTTAGAGACCTTTTT 57.483 37.500 11.32 2.50 35.02 1.94
227 228 6.517013 AAAAGTCCCTCTTAGAGACCTTTT 57.483 37.500 11.32 16.11 35.02 2.27
228 229 6.330514 AGAAAAAGTCCCTCTTAGAGACCTTT 59.669 38.462 11.32 11.69 35.02 3.11
229 230 5.847265 AGAAAAAGTCCCTCTTAGAGACCTT 59.153 40.000 11.32 6.52 35.02 3.50
230 231 5.407936 AGAAAAAGTCCCTCTTAGAGACCT 58.592 41.667 11.32 0.38 35.02 3.85
231 232 5.748670 AGAAAAAGTCCCTCTTAGAGACC 57.251 43.478 11.32 0.00 35.02 3.85
232 233 7.470935 ACTAGAAAAAGTCCCTCTTAGAGAC 57.529 40.000 11.32 2.08 35.02 3.36
233 234 7.706100 GACTAGAAAAAGTCCCTCTTAGAGA 57.294 40.000 11.32 0.00 40.06 3.10
244 245 7.797038 TTTTGTGTAGGGACTAGAAAAAGTC 57.203 36.000 0.00 0.00 41.46 3.01
266 267 4.323180 GGTGTTTGTTTCCAGGGACTTTTT 60.323 41.667 0.00 0.00 34.60 1.94
267 268 3.196901 GGTGTTTGTTTCCAGGGACTTTT 59.803 43.478 0.00 0.00 34.60 2.27
268 269 2.764010 GGTGTTTGTTTCCAGGGACTTT 59.236 45.455 0.00 0.00 34.60 2.66
269 270 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
270 271 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
271 272 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
272 273 0.105913 GGGGTGTTTGTTTCCAGGGA 60.106 55.000 0.00 0.00 0.00 4.20
273 274 1.118965 GGGGGTGTTTGTTTCCAGGG 61.119 60.000 0.00 0.00 0.00 4.45
274 275 0.105709 AGGGGGTGTTTGTTTCCAGG 60.106 55.000 0.00 0.00 0.00 4.45
275 276 1.788229 AAGGGGGTGTTTGTTTCCAG 58.212 50.000 0.00 0.00 0.00 3.86
276 277 3.399952 TTAAGGGGGTGTTTGTTTCCA 57.600 42.857 0.00 0.00 0.00 3.53
277 278 5.717654 TGATATTAAGGGGGTGTTTGTTTCC 59.282 40.000 0.00 0.00 0.00 3.13
278 279 6.436218 ACTGATATTAAGGGGGTGTTTGTTTC 59.564 38.462 0.00 0.00 0.00 2.78
279 280 6.210584 CACTGATATTAAGGGGGTGTTTGTTT 59.789 38.462 0.00 0.00 0.00 2.83
280 281 5.714806 CACTGATATTAAGGGGGTGTTTGTT 59.285 40.000 0.00 0.00 0.00 2.83
281 282 5.014755 TCACTGATATTAAGGGGGTGTTTGT 59.985 40.000 0.00 0.00 0.00 2.83
282 283 5.505780 TCACTGATATTAAGGGGGTGTTTG 58.494 41.667 0.00 0.00 0.00 2.93
283 284 5.789574 TCACTGATATTAAGGGGGTGTTT 57.210 39.130 0.00 0.00 0.00 2.83
284 285 5.789574 TTCACTGATATTAAGGGGGTGTT 57.210 39.130 0.00 0.00 0.00 3.32
285 286 5.789574 TTTCACTGATATTAAGGGGGTGT 57.210 39.130 0.00 0.00 0.00 4.16
286 287 7.998964 ACTAATTTCACTGATATTAAGGGGGTG 59.001 37.037 4.20 0.00 0.00 4.61
287 288 7.998964 CACTAATTTCACTGATATTAAGGGGGT 59.001 37.037 4.20 0.00 0.00 4.95
288 289 7.040409 GCACTAATTTCACTGATATTAAGGGGG 60.040 40.741 4.20 0.00 0.00 5.40
289 290 7.040409 GGCACTAATTTCACTGATATTAAGGGG 60.040 40.741 4.20 0.00 0.00 4.79
290 291 7.307989 CGGCACTAATTTCACTGATATTAAGGG 60.308 40.741 4.20 2.23 0.00 3.95
291 292 7.226720 ACGGCACTAATTTCACTGATATTAAGG 59.773 37.037 4.20 1.74 0.00 2.69
292 293 8.064222 CACGGCACTAATTTCACTGATATTAAG 58.936 37.037 4.20 2.27 0.00 1.85
299 300 3.006430 TCTCACGGCACTAATTTCACTGA 59.994 43.478 0.00 0.00 0.00 3.41
303 304 3.186909 CGATCTCACGGCACTAATTTCA 58.813 45.455 0.00 0.00 0.00 2.69
345 346 5.465935 GGATTTTAGCAACAAATCCGAACA 58.534 37.500 14.89 0.00 46.13 3.18
377 378 5.694231 TTAACGGAAAAGCTAAAAGGTCC 57.306 39.130 0.00 0.00 0.00 4.46
380 381 9.285770 GTATGATTTAACGGAAAAGCTAAAAGG 57.714 33.333 0.00 0.00 0.00 3.11
406 407 8.875168 ACACCTTATATCAAAGAATAGAGGGAG 58.125 37.037 0.00 0.00 0.00 4.30
452 453 9.929722 GCAACACAATACATCTTATATTTCGAA 57.070 29.630 0.00 0.00 0.00 3.71
453 454 9.103861 TGCAACACAATACATCTTATATTTCGA 57.896 29.630 0.00 0.00 0.00 3.71
454 455 9.158364 GTGCAACACAATACATCTTATATTTCG 57.842 33.333 0.00 0.00 36.32 3.46
455 456 9.450807 GGTGCAACACAATACATCTTATATTTC 57.549 33.333 0.00 0.00 39.98 2.17
456 457 8.965819 TGGTGCAACACAATACATCTTATATTT 58.034 29.630 0.00 0.00 39.98 1.40
457 458 8.405531 GTGGTGCAACACAATACATCTTATATT 58.594 33.333 29.71 0.00 40.99 1.28
458 459 7.775093 AGTGGTGCAACACAATACATCTTATAT 59.225 33.333 34.89 7.68 43.72 0.86
459 460 7.109501 AGTGGTGCAACACAATACATCTTATA 58.890 34.615 34.89 0.00 43.72 0.98
460 461 5.945784 AGTGGTGCAACACAATACATCTTAT 59.054 36.000 34.89 8.36 43.72 1.73
461 462 5.312895 AGTGGTGCAACACAATACATCTTA 58.687 37.500 34.89 0.00 43.72 2.10
462 463 4.144297 AGTGGTGCAACACAATACATCTT 58.856 39.130 34.89 9.70 43.72 2.40
463 464 3.753272 GAGTGGTGCAACACAATACATCT 59.247 43.478 34.89 13.25 43.72 2.90
464 465 3.424829 CGAGTGGTGCAACACAATACATC 60.425 47.826 34.89 21.31 43.72 3.06
465 466 2.483877 CGAGTGGTGCAACACAATACAT 59.516 45.455 34.89 14.84 43.72 2.29
466 467 1.870402 CGAGTGGTGCAACACAATACA 59.130 47.619 34.89 0.00 43.72 2.29
467 468 1.871039 ACGAGTGGTGCAACACAATAC 59.129 47.619 34.89 20.96 43.72 1.89
468 469 2.248280 ACGAGTGGTGCAACACAATA 57.752 45.000 34.89 0.00 43.72 1.90
469 470 1.388547 AACGAGTGGTGCAACACAAT 58.611 45.000 34.89 17.25 43.72 2.71
470 471 1.135546 CAAACGAGTGGTGCAACACAA 60.136 47.619 34.89 0.00 43.72 3.33
471 472 0.449786 CAAACGAGTGGTGCAACACA 59.550 50.000 34.89 10.33 43.72 3.72
472 473 0.248458 CCAAACGAGTGGTGCAACAC 60.248 55.000 27.66 27.66 39.98 3.32
473 474 0.393132 TCCAAACGAGTGGTGCAACA 60.393 50.000 0.00 0.00 39.98 3.33
474 475 0.951558 ATCCAAACGAGTGGTGCAAC 59.048 50.000 0.00 0.00 39.88 4.17
475 476 2.552599 TATCCAAACGAGTGGTGCAA 57.447 45.000 8.62 0.00 39.88 4.08
476 477 2.779755 ATATCCAAACGAGTGGTGCA 57.220 45.000 8.62 0.00 39.88 4.57
477 478 4.434713 AAAATATCCAAACGAGTGGTGC 57.565 40.909 8.62 0.00 39.88 5.01
526 527 9.750783 AAAATAGATGAGCTTGCCTGATATAAT 57.249 29.630 0.00 0.00 0.00 1.28
527 528 9.224267 GAAAATAGATGAGCTTGCCTGATATAA 57.776 33.333 0.00 0.00 0.00 0.98
528 529 8.600668 AGAAAATAGATGAGCTTGCCTGATATA 58.399 33.333 0.00 0.00 0.00 0.86
529 530 7.460071 AGAAAATAGATGAGCTTGCCTGATAT 58.540 34.615 0.00 0.00 0.00 1.63
530 531 6.835174 AGAAAATAGATGAGCTTGCCTGATA 58.165 36.000 0.00 0.00 0.00 2.15
531 532 5.692928 AGAAAATAGATGAGCTTGCCTGAT 58.307 37.500 0.00 0.00 0.00 2.90
532 533 5.108187 AGAAAATAGATGAGCTTGCCTGA 57.892 39.130 0.00 0.00 0.00 3.86
533 534 4.880120 TGAGAAAATAGATGAGCTTGCCTG 59.120 41.667 0.00 0.00 0.00 4.85
534 535 5.108187 TGAGAAAATAGATGAGCTTGCCT 57.892 39.130 0.00 0.00 0.00 4.75
535 536 5.298777 ACATGAGAAAATAGATGAGCTTGCC 59.701 40.000 0.00 0.00 0.00 4.52
536 537 6.037940 TGACATGAGAAAATAGATGAGCTTGC 59.962 38.462 0.00 0.00 0.00 4.01
537 538 7.549615 TGACATGAGAAAATAGATGAGCTTG 57.450 36.000 0.00 0.00 0.00 4.01
538 539 8.749026 ATTGACATGAGAAAATAGATGAGCTT 57.251 30.769 0.00 0.00 0.00 3.74
539 540 8.749026 AATTGACATGAGAAAATAGATGAGCT 57.251 30.769 0.00 0.00 0.00 4.09
545 546 9.605275 CCTGACTAATTGACATGAGAAAATAGA 57.395 33.333 0.00 0.00 0.00 1.98
546 547 9.388506 ACCTGACTAATTGACATGAGAAAATAG 57.611 33.333 0.00 0.49 0.00 1.73
547 548 9.166173 CACCTGACTAATTGACATGAGAAAATA 57.834 33.333 0.00 0.00 0.00 1.40
548 549 7.667219 ACACCTGACTAATTGACATGAGAAAAT 59.333 33.333 0.00 0.00 0.00 1.82
549 550 6.998074 ACACCTGACTAATTGACATGAGAAAA 59.002 34.615 0.00 0.00 0.00 2.29
550 551 6.533730 ACACCTGACTAATTGACATGAGAAA 58.466 36.000 0.00 0.00 0.00 2.52
551 552 6.114187 ACACCTGACTAATTGACATGAGAA 57.886 37.500 0.00 0.00 0.00 2.87
552 553 5.745312 ACACCTGACTAATTGACATGAGA 57.255 39.130 0.00 0.00 0.00 3.27
553 554 7.984050 AGATTACACCTGACTAATTGACATGAG 59.016 37.037 0.00 0.00 0.00 2.90
554 555 7.851228 AGATTACACCTGACTAATTGACATGA 58.149 34.615 0.00 0.00 0.00 3.07
555 556 8.498054 AAGATTACACCTGACTAATTGACATG 57.502 34.615 0.00 0.00 0.00 3.21
556 557 9.823647 CTAAGATTACACCTGACTAATTGACAT 57.176 33.333 0.00 0.00 0.00 3.06
557 558 7.764443 GCTAAGATTACACCTGACTAATTGACA 59.236 37.037 0.00 0.00 0.00 3.58
558 559 7.224949 GGCTAAGATTACACCTGACTAATTGAC 59.775 40.741 0.00 0.00 0.00 3.18
559 560 7.093068 TGGCTAAGATTACACCTGACTAATTGA 60.093 37.037 0.00 0.00 0.00 2.57
560 561 7.047891 TGGCTAAGATTACACCTGACTAATTG 58.952 38.462 0.00 0.00 0.00 2.32
561 562 7.195374 TGGCTAAGATTACACCTGACTAATT 57.805 36.000 0.00 0.00 0.00 1.40
562 563 6.808321 TGGCTAAGATTACACCTGACTAAT 57.192 37.500 0.00 0.00 0.00 1.73
563 564 6.614694 TTGGCTAAGATTACACCTGACTAA 57.385 37.500 0.00 0.00 0.00 2.24
564 565 6.614694 TTTGGCTAAGATTACACCTGACTA 57.385 37.500 0.00 0.00 0.00 2.59
565 566 5.499004 TTTGGCTAAGATTACACCTGACT 57.501 39.130 0.00 0.00 0.00 3.41
566 567 5.705905 AGTTTTGGCTAAGATTACACCTGAC 59.294 40.000 0.00 0.00 0.00 3.51
567 568 5.876357 AGTTTTGGCTAAGATTACACCTGA 58.124 37.500 0.00 0.00 0.00 3.86
568 569 6.016276 ACAAGTTTTGGCTAAGATTACACCTG 60.016 38.462 0.00 0.00 34.12 4.00
569 570 6.016276 CACAAGTTTTGGCTAAGATTACACCT 60.016 38.462 0.00 0.00 34.12 4.00
570 571 6.016610 TCACAAGTTTTGGCTAAGATTACACC 60.017 38.462 0.00 0.00 34.12 4.16
571 572 6.966021 TCACAAGTTTTGGCTAAGATTACAC 58.034 36.000 0.00 0.00 34.12 2.90
572 573 7.575414 TTCACAAGTTTTGGCTAAGATTACA 57.425 32.000 0.00 0.00 34.12 2.41
573 574 9.476202 AATTTCACAAGTTTTGGCTAAGATTAC 57.524 29.630 0.00 0.00 34.12 1.89
575 576 8.962884 AAATTTCACAAGTTTTGGCTAAGATT 57.037 26.923 0.00 0.00 34.12 2.40
576 577 8.962884 AAAATTTCACAAGTTTTGGCTAAGAT 57.037 26.923 0.00 0.00 34.12 2.40
577 578 8.785329 AAAAATTTCACAAGTTTTGGCTAAGA 57.215 26.923 0.00 0.00 38.44 2.10
578 579 8.122330 GGAAAAATTTCACAAGTTTTGGCTAAG 58.878 33.333 8.06 0.00 39.63 2.18
579 580 7.826744 AGGAAAAATTTCACAAGTTTTGGCTAA 59.173 29.630 8.06 0.00 39.63 3.09
580 581 7.334858 AGGAAAAATTTCACAAGTTTTGGCTA 58.665 30.769 8.06 0.00 39.63 3.93
581 582 6.179756 AGGAAAAATTTCACAAGTTTTGGCT 58.820 32.000 8.06 0.00 39.63 4.75
582 583 6.435430 AGGAAAAATTTCACAAGTTTTGGC 57.565 33.333 8.06 0.00 39.63 4.52
583 584 6.597280 TGGAGGAAAAATTTCACAAGTTTTGG 59.403 34.615 8.06 0.00 39.63 3.28
584 585 7.608308 TGGAGGAAAAATTTCACAAGTTTTG 57.392 32.000 8.06 0.00 39.63 2.44
585 586 7.828717 ACATGGAGGAAAAATTTCACAAGTTTT 59.171 29.630 8.06 0.00 41.64 2.43
586 587 7.280652 CACATGGAGGAAAAATTTCACAAGTTT 59.719 33.333 8.06 0.00 38.92 2.66
587 588 6.762661 CACATGGAGGAAAAATTTCACAAGTT 59.237 34.615 8.06 0.00 38.92 2.66
588 589 6.282930 CACATGGAGGAAAAATTTCACAAGT 58.717 36.000 8.06 4.54 38.92 3.16
589 590 5.178067 GCACATGGAGGAAAAATTTCACAAG 59.822 40.000 8.06 4.03 38.92 3.16
590 591 5.055812 GCACATGGAGGAAAAATTTCACAA 58.944 37.500 8.06 0.00 38.92 3.33
591 592 4.630111 GCACATGGAGGAAAAATTTCACA 58.370 39.130 8.06 4.45 38.92 3.58
592 593 3.674753 CGCACATGGAGGAAAAATTTCAC 59.325 43.478 8.06 2.03 38.92 3.18
593 594 3.320541 ACGCACATGGAGGAAAAATTTCA 59.679 39.130 8.06 0.00 38.92 2.69
594 595 3.913089 ACGCACATGGAGGAAAAATTTC 58.087 40.909 0.00 0.00 36.46 2.17
595 596 4.335400 AACGCACATGGAGGAAAAATTT 57.665 36.364 0.00 0.00 0.00 1.82
596 597 4.335400 AAACGCACATGGAGGAAAAATT 57.665 36.364 0.00 0.00 0.00 1.82
597 598 4.335400 AAAACGCACATGGAGGAAAAAT 57.665 36.364 0.00 0.00 0.00 1.82
598 599 3.810310 AAAACGCACATGGAGGAAAAA 57.190 38.095 0.00 0.00 0.00 1.94
599 600 3.810310 AAAAACGCACATGGAGGAAAA 57.190 38.095 0.00 0.00 0.00 2.29
616 617 6.986904 AGTTTTTGGCACGGAAATTAAAAA 57.013 29.167 0.00 0.00 0.00 1.94
617 618 9.194271 GTATAGTTTTTGGCACGGAAATTAAAA 57.806 29.630 0.00 0.00 0.00 1.52
618 619 7.537991 CGTATAGTTTTTGGCACGGAAATTAAA 59.462 33.333 0.00 0.00 0.00 1.52
619 620 7.022384 CGTATAGTTTTTGGCACGGAAATTAA 58.978 34.615 0.00 0.00 0.00 1.40
620 621 6.544622 CGTATAGTTTTTGGCACGGAAATTA 58.455 36.000 0.00 0.00 0.00 1.40
621 622 5.395642 CGTATAGTTTTTGGCACGGAAATT 58.604 37.500 0.00 0.00 0.00 1.82
622 623 4.673320 GCGTATAGTTTTTGGCACGGAAAT 60.673 41.667 0.00 0.00 0.00 2.17
623 624 3.365164 GCGTATAGTTTTTGGCACGGAAA 60.365 43.478 0.00 0.00 0.00 3.13
624 625 2.160022 GCGTATAGTTTTTGGCACGGAA 59.840 45.455 0.00 0.00 0.00 4.30
625 626 1.733360 GCGTATAGTTTTTGGCACGGA 59.267 47.619 0.00 0.00 0.00 4.69
626 627 1.202098 GGCGTATAGTTTTTGGCACGG 60.202 52.381 0.00 0.00 0.00 4.94
627 628 1.202098 GGGCGTATAGTTTTTGGCACG 60.202 52.381 0.00 0.00 0.00 5.34
628 629 2.089201 AGGGCGTATAGTTTTTGGCAC 58.911 47.619 0.00 0.00 0.00 5.01
629 630 2.500392 AGGGCGTATAGTTTTTGGCA 57.500 45.000 0.00 0.00 0.00 4.92
630 631 6.812879 AATATAGGGCGTATAGTTTTTGGC 57.187 37.500 12.01 0.00 0.00 4.52
631 632 9.715121 TCTAAATATAGGGCGTATAGTTTTTGG 57.285 33.333 20.49 13.64 34.50 3.28
640 641 9.841295 TTCTTTGTTTCTAAATATAGGGCGTAT 57.159 29.630 4.95 4.95 0.00 3.06
641 642 9.669887 TTTCTTTGTTTCTAAATATAGGGCGTA 57.330 29.630 0.00 0.00 0.00 4.42
642 643 8.570068 TTTCTTTGTTTCTAAATATAGGGCGT 57.430 30.769 0.00 0.00 0.00 5.68
643 644 8.674607 ACTTTCTTTGTTTCTAAATATAGGGCG 58.325 33.333 0.00 0.00 0.00 6.13
654 655 9.332502 TGCAACACTATACTTTCTTTGTTTCTA 57.667 29.630 0.00 0.00 0.00 2.10
655 656 8.220755 TGCAACACTATACTTTCTTTGTTTCT 57.779 30.769 0.00 0.00 0.00 2.52
656 657 8.743099 GTTGCAACACTATACTTTCTTTGTTTC 58.257 33.333 24.52 0.00 0.00 2.78
657 658 8.247562 TGTTGCAACACTATACTTTCTTTGTTT 58.752 29.630 27.96 0.00 33.17 2.83
658 659 7.767261 TGTTGCAACACTATACTTTCTTTGTT 58.233 30.769 27.96 0.00 33.17 2.83
659 660 7.328277 TGTTGCAACACTATACTTTCTTTGT 57.672 32.000 27.96 0.00 33.17 2.83
687 688 5.776519 TTTTGTTGAGCAAATGTTCACAC 57.223 34.783 0.00 3.41 45.38 3.82
714 715 3.074412 CCCTGTGTACATCAAGGACAAC 58.926 50.000 18.78 0.00 0.00 3.32
717 718 3.074412 CAACCCTGTGTACATCAAGGAC 58.926 50.000 18.78 0.00 0.00 3.85
718 719 2.552155 GCAACCCTGTGTACATCAAGGA 60.552 50.000 18.78 0.00 0.00 3.36
760 762 1.758783 GTTTGAGTTTGCCTTGCTCG 58.241 50.000 0.00 0.00 32.32 5.03
879 914 2.664835 ATAGGACTGGGAGGGCTCGG 62.665 65.000 0.00 0.00 0.00 4.63
880 915 0.112606 TATAGGACTGGGAGGGCTCG 59.887 60.000 0.00 0.00 0.00 5.03
881 916 2.632763 ATATAGGACTGGGAGGGCTC 57.367 55.000 0.00 0.00 0.00 4.70
882 917 3.668115 TCTTATATAGGACTGGGAGGGCT 59.332 47.826 0.00 0.00 0.00 5.19
883 918 4.062490 TCTTATATAGGACTGGGAGGGC 57.938 50.000 0.00 0.00 0.00 5.19
884 919 4.778427 GGTTCTTATATAGGACTGGGAGGG 59.222 50.000 0.00 0.00 32.44 4.30
974 1010 6.017687 GGTTACTTGGTTAGAACGACAAACAT 60.018 38.462 0.00 0.00 0.00 2.71
1031 1068 1.203001 GGAGGAAAACCATGGTCACCA 60.203 52.381 20.07 0.00 38.19 4.17
1064 1101 3.529341 ATGTTGCCGACACTCGCCA 62.529 57.895 0.00 0.00 42.04 5.69
1073 1110 0.943835 CGACACTGTGATGTTGCCGA 60.944 55.000 15.86 0.00 31.24 5.54
1074 1111 1.221466 ACGACACTGTGATGTTGCCG 61.221 55.000 15.86 8.10 37.48 5.69
1079 1116 0.944311 GGCGAACGACACTGTGATGT 60.944 55.000 15.86 9.20 34.78 3.06
1086 1123 2.979197 CTCCGAGGCGAACGACACT 61.979 63.158 2.25 0.00 0.00 3.55
1087 1124 2.504244 CTCCGAGGCGAACGACAC 60.504 66.667 2.25 0.00 0.00 3.67
1260 1297 2.815722 AGCGAACTCGTTGAGCTTC 58.184 52.632 0.51 0.00 42.22 3.86
1292 1329 2.813179 CGGCTGCCGTAGTCATTGC 61.813 63.158 31.72 0.00 42.73 3.56
1293 1330 3.398920 CGGCTGCCGTAGTCATTG 58.601 61.111 31.72 1.11 42.73 2.82
1307 1344 1.595382 ATCGGAATGTAGCAGCGGC 60.595 57.895 0.00 0.00 41.61 6.53
1344 1381 2.558380 ATTTTCTCCGCTGGCCCTCC 62.558 60.000 0.00 0.00 0.00 4.30
1421 1458 1.450312 CAGTGCGTCCCTTGATCCC 60.450 63.158 0.00 0.00 0.00 3.85
1600 1637 1.660560 GCGATGCCATCACCAAGCTT 61.661 55.000 5.40 0.00 0.00 3.74
1645 1682 1.065418 GTAGCACCAGCCCATAACACT 60.065 52.381 0.00 0.00 43.56 3.55
1713 1750 3.701604 GAGCGCAATCTCGTCCCGT 62.702 63.158 11.47 0.00 0.00 5.28
1812 1849 1.978455 TATTGCAGGGCCCGTCGAAT 61.978 55.000 18.44 15.42 0.00 3.34
1842 1879 2.829384 AACCAGGGTCATGGCGTGT 61.829 57.895 6.60 0.00 44.80 4.49
1897 1934 3.069318 GTCGACTCCCTCCGGCTT 61.069 66.667 8.70 0.00 0.00 4.35
1953 1990 1.005037 CCGCATATAGCCGGCTTCA 60.005 57.895 37.74 23.29 41.38 3.02
1989 2026 2.846532 CAGACCCCACCTTTGGCT 59.153 61.111 0.00 0.00 42.35 4.75
2109 2146 6.439058 GCTCTTATATTATGGGACTGAGGAGT 59.561 42.308 0.00 0.00 33.98 3.85
2110 2147 6.405286 CGCTCTTATATTATGGGACTGAGGAG 60.405 46.154 0.00 0.00 0.00 3.69
2111 2148 5.419155 CGCTCTTATATTATGGGACTGAGGA 59.581 44.000 0.00 0.00 0.00 3.71
2139 2176 7.621841 GCGTTTTTGTCAATGCATTAATGTCAT 60.622 33.333 12.53 15.88 38.38 3.06
2148 2185 3.648339 AGAGCGTTTTTGTCAATGCAT 57.352 38.095 0.00 0.00 40.60 3.96
2167 2204 9.683870 ACTACTCCCTTCGTCCTATAATATAAG 57.316 37.037 0.00 0.00 0.00 1.73
2177 2214 4.044946 ACTTTACTACTCCCTTCGTCCT 57.955 45.455 0.00 0.00 0.00 3.85
2209 2247 7.489113 CGAGTGGCTTGCTTTAATTTATTTCAT 59.511 33.333 0.00 0.00 0.00 2.57
2210 2248 6.806249 CGAGTGGCTTGCTTTAATTTATTTCA 59.194 34.615 0.00 0.00 0.00 2.69
2212 2250 6.687604 ACGAGTGGCTTGCTTTAATTTATTT 58.312 32.000 0.00 0.00 0.00 1.40
2280 2318 0.395862 GAGATCGGTCTCCCCACTGA 60.396 60.000 15.13 0.00 44.20 3.41
2408 2446 6.255887 CGTAGAATAAAGAAGTGGTGGCTTAG 59.744 42.308 0.00 0.00 0.00 2.18
2418 2456 9.623350 GTAGTGAAAGACGTAGAATAAAGAAGT 57.377 33.333 0.00 0.00 0.00 3.01
2489 2527 3.055094 GGAAGAGAAGGTGAGTTATGGCA 60.055 47.826 0.00 0.00 0.00 4.92
2538 2576 4.697756 GTAGCAGTGCCGCACCCA 62.698 66.667 19.96 0.00 34.49 4.51
2621 2659 2.328099 GCAGAAGGAGGCGTTGGTG 61.328 63.158 0.00 0.00 0.00 4.17
2639 2677 2.764547 GGGTCGGAAGGGAGAGGG 60.765 72.222 0.00 0.00 0.00 4.30
2832 2870 2.246739 CCCATGCTATGCCGTCACG 61.247 63.158 0.00 0.00 0.00 4.35
2940 2979 1.005394 CTGCAAACCGGTACCTCGT 60.005 57.895 8.00 2.78 0.00 4.18
3002 3041 6.499350 TGGGTTATGTTACTAGTCTTGGTCTT 59.501 38.462 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.