Multiple sequence alignment - TraesCS7A01G524600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G524600 chr7A 100.000 8074 0 0 1 8074 706913066 706904993 0.000000e+00 14910.0
1 TraesCS7A01G524600 chr7A 96.400 250 9 0 5374 5623 250344609 250344360 5.830000e-111 412.0
2 TraesCS7A01G524600 chr7A 86.667 180 19 4 641 819 286246287 286246462 2.300000e-45 195.0
3 TraesCS7A01G524600 chr7B 96.881 3110 82 10 1913 5015 706862067 706858966 0.000000e+00 5192.0
4 TraesCS7A01G524600 chr7B 92.370 2110 90 20 5619 7678 706858436 706856348 0.000000e+00 2939.0
5 TraesCS7A01G524600 chr7B 93.418 471 18 7 845 1311 706863175 706862714 0.000000e+00 686.0
6 TraesCS7A01G524600 chr7B 90.302 464 38 1 3 466 706864112 706863656 1.160000e-167 601.0
7 TraesCS7A01G524600 chr7B 86.237 465 57 6 3 466 711233493 711233035 1.560000e-136 497.0
8 TraesCS7A01G524600 chr7B 92.378 328 22 3 462 788 706863617 706863292 1.590000e-126 464.0
9 TraesCS7A01G524600 chr7B 89.855 345 20 11 5032 5372 706858763 706858430 5.790000e-116 429.0
10 TraesCS7A01G524600 chr7B 95.720 257 11 0 5374 5630 229821436 229821180 1.620000e-111 414.0
11 TraesCS7A01G524600 chr7B 92.453 212 10 3 7689 7898 706856301 706856094 1.700000e-76 298.0
12 TraesCS7A01G524600 chr7B 85.549 173 24 1 471 643 559677367 559677196 6.440000e-41 180.0
13 TraesCS7A01G524600 chr7B 91.964 112 7 2 7955 8066 488388845 488388736 1.080000e-33 156.0
14 TraesCS7A01G524600 chr7B 79.000 100 17 4 4858 4956 706859218 706859122 1.880000e-06 65.8
15 TraesCS7A01G524600 chr7D 95.741 2559 73 24 2831 5372 614543394 614540855 0.000000e+00 4089.0
16 TraesCS7A01G524600 chr7D 94.815 1813 68 14 5616 7406 614540865 614539057 0.000000e+00 2804.0
17 TraesCS7A01G524600 chr7D 92.404 1435 69 14 1368 2792 614544797 614543393 0.000000e+00 2010.0
18 TraesCS7A01G524600 chr7D 91.045 536 20 11 839 1367 614545344 614544830 0.000000e+00 699.0
19 TraesCS7A01G524600 chr7D 84.252 254 34 5 5374 5623 1972055 1972306 8.100000e-60 243.0
20 TraesCS7A01G524600 chr7D 82.373 295 26 15 7531 7822 614538934 614538663 4.870000e-57 233.0
21 TraesCS7A01G524600 chr7D 88.889 180 18 2 641 819 263509253 263509431 3.790000e-53 220.0
22 TraesCS7A01G524600 chr7D 86.250 160 22 0 473 632 160428022 160428181 3.000000e-39 174.0
23 TraesCS7A01G524600 chr7D 84.783 92 7 2 7412 7503 614539016 614538932 1.440000e-12 86.1
24 TraesCS7A01G524600 chr1D 79.641 668 101 24 3 642 145934421 145935081 1.600000e-121 448.0
25 TraesCS7A01G524600 chr3A 95.385 260 10 2 5365 5623 36643227 36643485 5.830000e-111 412.0
26 TraesCS7A01G524600 chr3A 80.810 469 74 14 4 462 653329603 653329141 3.580000e-93 353.0
27 TraesCS7A01G524600 chr3A 87.692 195 19 4 2522 2716 177886476 177886287 1.050000e-53 222.0
28 TraesCS7A01G524600 chr3A 87.692 195 19 4 2522 2716 718677756 718677567 1.050000e-53 222.0
29 TraesCS7A01G524600 chr2A 95.918 245 10 0 5374 5618 23950399 23950155 1.630000e-106 398.0
30 TraesCS7A01G524600 chr2A 97.196 107 3 0 1095 1201 12833872 12833978 1.790000e-41 182.0
31 TraesCS7A01G524600 chr2A 94.118 102 6 0 7965 8066 565325314 565325415 1.080000e-33 156.0
32 TraesCS7A01G524600 chr2A 88.333 60 6 1 669 728 8561448 8561390 4.040000e-08 71.3
33 TraesCS7A01G524600 chr4D 82.073 463 74 9 5 463 107748483 107748026 3.530000e-103 387.0
34 TraesCS7A01G524600 chr4D 82.310 407 55 13 3 401 40117924 40118321 3.610000e-88 337.0
35 TraesCS7A01G524600 chr5D 79.062 597 85 25 3 571 52278225 52278809 2.750000e-99 374.0
36 TraesCS7A01G524600 chr5D 90.234 256 25 0 5374 5629 305191588 305191843 1.300000e-87 335.0
37 TraesCS7A01G524600 chr5D 86.813 182 21 3 462 642 527145630 527145809 4.940000e-47 200.0
38 TraesCS7A01G524600 chr5D 94.595 37 0 2 1018 1052 429024820 429024784 1.000000e-03 56.5
39 TraesCS7A01G524600 chr2D 81.144 472 77 11 1 466 144420427 144419962 1.280000e-97 368.0
40 TraesCS7A01G524600 chr2D 94.340 106 6 0 7966 8071 14042249 14042354 6.480000e-36 163.0
41 TraesCS7A01G524600 chr6B 94.667 225 10 2 5365 5589 140355049 140354827 1.670000e-91 348.0
42 TraesCS7A01G524600 chr5B 80.260 461 74 11 3 453 382379355 382378902 1.680000e-86 331.0
43 TraesCS7A01G524600 chr5B 91.892 111 9 0 7964 8074 454687512 454687402 1.080000e-33 156.0
44 TraesCS7A01G524600 chr3D 84.488 303 39 8 2598 2900 601238290 601238584 7.930000e-75 292.0
45 TraesCS7A01G524600 chr3D 87.222 180 20 3 641 819 160762342 160762519 1.370000e-47 202.0
46 TraesCS7A01G524600 chr6D 84.646 254 34 4 5374 5624 460588260 460588009 1.740000e-61 248.0
47 TraesCS7A01G524600 chr6D 93.636 110 4 1 7965 8074 430048938 430048832 2.330000e-35 161.0
48 TraesCS7A01G524600 chr5A 82.963 270 36 8 5374 5637 397510139 397510404 1.350000e-57 235.0
49 TraesCS7A01G524600 chr5A 85.549 173 25 0 471 643 415159618 415159446 1.790000e-41 182.0
50 TraesCS7A01G524600 chr3B 89.944 179 17 1 641 819 237561105 237561282 6.300000e-56 230.0
51 TraesCS7A01G524600 chr3B 87.692 195 19 4 2522 2716 368887934 368888123 1.050000e-53 222.0
52 TraesCS7A01G524600 chr1B 87.692 195 19 4 2522 2716 403409290 403409101 1.050000e-53 222.0
53 TraesCS7A01G524600 chr1B 93.458 107 7 0 7964 8070 592045593 592045699 8.390000e-35 159.0
54 TraesCS7A01G524600 chr1B 91.818 110 9 0 7965 8074 676956173 676956064 3.900000e-33 154.0
55 TraesCS7A01G524600 chrUn 87.179 195 20 4 2522 2716 306104243 306104432 4.910000e-52 217.0
56 TraesCS7A01G524600 chr4B 87.179 195 20 4 2522 2716 274046759 274046570 4.910000e-52 217.0
57 TraesCS7A01G524600 chr4B 85.549 173 25 0 471 643 386196678 386196506 1.790000e-41 182.0
58 TraesCS7A01G524600 chr6A 87.059 170 20 2 471 639 45769877 45769709 2.970000e-44 191.0
59 TraesCS7A01G524600 chr6A 86.047 172 23 1 471 641 45758793 45758622 4.980000e-42 183.0
60 TraesCS7A01G524600 chr1A 86.047 172 24 0 471 642 451355282 451355111 1.380000e-42 185.0
61 TraesCS7A01G524600 chr2B 91.818 110 8 1 7963 8071 263661972 263662081 1.400000e-32 152.0
62 TraesCS7A01G524600 chr4A 89.655 116 10 2 7957 8071 270202918 270203032 6.530000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G524600 chr7A 706904993 706913066 8073 True 14910.000000 14910 100.000000 1 8074 1 chr7A.!!$R2 8073
1 TraesCS7A01G524600 chr7B 706856094 706864112 8018 True 1334.350000 5192 90.832125 3 7898 8 chr7B.!!$R5 7895
2 TraesCS7A01G524600 chr7D 614538663 614545344 6681 True 1653.516667 4089 90.193500 839 7822 6 chr7D.!!$R1 6983
3 TraesCS7A01G524600 chr1D 145934421 145935081 660 False 448.000000 448 79.641000 3 642 1 chr1D.!!$F1 639
4 TraesCS7A01G524600 chr5D 52278225 52278809 584 False 374.000000 374 79.062000 3 571 1 chr5D.!!$F1 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 184 0.796312 GTGGTGTGTGTTATCCGCTG 59.204 55.0 0.0 0.0 0.00 5.18 F
1391 1567 0.401395 TCCGGGAAATCTGCCCCTAT 60.401 55.0 0.0 0.0 42.92 2.57 F
1839 2122 0.036858 GAGGCTTCACTCACCACTCC 60.037 60.0 0.0 0.0 37.44 3.85 F
1991 2275 0.247736 ACGCATTCTCTTTCTCGCCT 59.752 50.0 0.0 0.0 0.00 5.52 F
3958 4245 0.539986 TCGAGGGGTATTGCTCAACC 59.460 55.0 0.0 0.0 34.85 3.77 F
4490 4778 1.246649 TGCATCATTGGTTCGCTGTT 58.753 45.0 0.0 0.0 0.00 3.16 F
5109 5587 0.903942 TTGCTTTTGGATCATGGGGC 59.096 50.0 0.0 0.0 0.00 5.80 F
5581 6064 0.327924 TGGTTTGATGGCCGAGATGT 59.672 50.0 0.0 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1820 2103 0.036858 GGAGTGGTGAGTGAAGCCTC 60.037 60.000 0.00 0.00 0.00 4.70 R
2390 2674 1.844497 ACCCTGTTATTAGGACCAGCC 59.156 52.381 0.00 0.00 40.42 4.85 R
3783 4070 0.606401 AGACATCAAGCCACCAACCG 60.606 55.000 0.00 0.00 0.00 4.44 R
4275 4562 4.272504 GCTCAATGAAAACGATATCGGGAA 59.727 41.667 27.58 9.89 44.95 3.97 R
5017 5310 0.110486 GGAGGGGCTTCAACAGAACA 59.890 55.000 0.00 0.00 0.00 3.18 R
5388 5871 0.316114 ATATCAACGCGCATTGCACG 60.316 50.000 12.07 16.80 46.97 5.34 R
6929 7441 0.109458 CATCAGGTTCGTTCGACCGA 60.109 55.000 0.00 0.00 42.11 4.69 R
7635 8196 0.250295 TGAAACCACGAGCTTCCCTG 60.250 55.000 0.00 0.00 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
164 169 3.485463 TGGGACTTTCTTAGTGTGGTG 57.515 47.619 0.00 0.00 37.17 4.17
178 184 0.796312 GTGGTGTGTGTTATCCGCTG 59.204 55.000 0.00 0.00 0.00 5.18
184 190 2.290008 TGTGTGTTATCCGCTGACCAAT 60.290 45.455 0.00 0.00 0.00 3.16
232 238 2.607635 GTCGGTGGTTGCATGTACTATG 59.392 50.000 0.00 0.00 0.00 2.23
258 264 8.413229 GTTGGTGCTAAAATATCACATGGTTAT 58.587 33.333 0.00 0.00 32.69 1.89
306 312 4.261447 GGGTGCACGGGATTAATATGTTTC 60.261 45.833 11.45 0.00 0.00 2.78
379 385 8.630917 TCAAAATCGTAAACCAAGTCCAAAATA 58.369 29.630 0.00 0.00 0.00 1.40
380 386 9.250624 CAAAATCGTAAACCAAGTCCAAAATAA 57.749 29.630 0.00 0.00 0.00 1.40
429 435 4.753107 TCAAAACCAGAGAACATACGGAAC 59.247 41.667 0.00 0.00 0.00 3.62
453 459 7.231467 ACTAAAAGAATTGAGTGGGAAAGCTA 58.769 34.615 0.00 0.00 0.00 3.32
459 465 4.431416 TTGAGTGGGAAAGCTACTTGAA 57.569 40.909 0.00 0.00 0.00 2.69
469 526 5.334646 GGAAAGCTACTTGAAAAAGTACCCG 60.335 44.000 0.00 0.00 34.37 5.28
539 596 6.916360 AACAAATTGAATGAGGGAGCTTTA 57.084 33.333 0.00 0.00 0.00 1.85
554 611 5.243954 GGGAGCTTTAAGAAATTGTTGACCT 59.756 40.000 0.00 0.00 0.00 3.85
632 690 9.589111 CTCTTTAAAATTAGGGAGTCTAGTGTC 57.411 37.037 0.00 0.00 0.00 3.67
657 715 5.011533 ACAGAGGATGGATAGATTAGTGCAC 59.988 44.000 9.40 9.40 0.00 4.57
697 755 5.449999 CCACATTCATGACTTGATGATGTGG 60.450 44.000 27.00 27.00 44.46 4.17
702 760 2.371306 TGACTTGATGATGTGGCATGG 58.629 47.619 0.00 0.00 0.00 3.66
767 825 7.493320 GCATAATTTGATGATGTGTCATGGTTT 59.507 33.333 0.00 0.00 44.96 3.27
768 826 9.027129 CATAATTTGATGATGTGTCATGGTTTC 57.973 33.333 0.00 0.00 44.96 2.78
770 828 6.593268 TTTGATGATGTGTCATGGTTTCAT 57.407 33.333 0.00 0.00 44.96 2.57
790 874 8.563732 GTTTCATGAGGAGGAAAAATAGATAGC 58.436 37.037 0.00 0.00 33.85 2.97
794 878 5.544176 TGAGGAGGAAAAATAGATAGCGGAT 59.456 40.000 0.00 0.00 0.00 4.18
810 894 4.468095 GCGGATTGCAACTATTTACGAT 57.532 40.909 0.00 0.00 45.45 3.73
817 901 9.042008 GGATTGCAACTATTTACGATTAGAAGA 57.958 33.333 0.00 0.00 0.00 2.87
834 940 8.734218 ATTAGAAGATACTTATATCCTCGCGA 57.266 34.615 9.26 9.26 38.43 5.87
875 992 2.745037 CCGGACCCGTTTGAGGAA 59.255 61.111 0.00 0.00 37.81 3.36
967 1084 2.201490 CCCTCCCTATCCGCCTCA 59.799 66.667 0.00 0.00 0.00 3.86
1221 1341 1.133253 CGGCAGCATCAAGTTCGTG 59.867 57.895 0.00 0.00 0.00 4.35
1321 1448 2.316372 CCTCCCATCCCTAGGTAGCTAT 59.684 54.545 8.29 0.00 0.00 2.97
1322 1449 3.532232 CCTCCCATCCCTAGGTAGCTATA 59.468 52.174 8.29 0.00 0.00 1.31
1356 1497 2.828549 ATTCGATTGGGCGGTGGC 60.829 61.111 0.00 0.00 38.90 5.01
1373 1549 2.158449 GTGGCGGAATCGATCATTCATC 59.842 50.000 0.00 0.00 42.69 2.92
1386 1562 1.610522 CATTCATCCGGGAAATCTGCC 59.389 52.381 0.00 0.00 0.00 4.85
1391 1567 0.401395 TCCGGGAAATCTGCCCCTAT 60.401 55.000 0.00 0.00 42.92 2.57
1393 1569 1.059913 CGGGAAATCTGCCCCTATCT 58.940 55.000 0.00 0.00 42.92 1.98
1404 1587 1.694693 GCCCCTATCTGTAGGTTGGGA 60.695 57.143 12.47 0.00 45.16 4.37
1407 1590 3.073062 CCCCTATCTGTAGGTTGGGAATG 59.927 52.174 12.47 0.00 45.16 2.67
1453 1643 4.018960 CCTGGATAGGGGAATTGATGTAGG 60.019 50.000 0.00 0.00 40.63 3.18
1462 1652 5.399727 GGGGAATTGATGTAGGGGTGATTTA 60.400 44.000 0.00 0.00 0.00 1.40
1467 1657 3.521531 TGATGTAGGGGTGATTTAGTGCA 59.478 43.478 0.00 0.00 0.00 4.57
1493 1683 5.864474 CGTAGGAATGATTTTAGCGCTCTAT 59.136 40.000 16.34 5.76 0.00 1.98
1494 1684 7.027760 CGTAGGAATGATTTTAGCGCTCTATA 58.972 38.462 16.34 0.00 0.00 1.31
1495 1685 7.008447 CGTAGGAATGATTTTAGCGCTCTATAC 59.992 40.741 16.34 4.92 0.00 1.47
1496 1686 5.864474 AGGAATGATTTTAGCGCTCTATACG 59.136 40.000 16.34 0.00 0.00 3.06
1508 1698 5.573282 AGCGCTCTATACGTTGCTATAATTG 59.427 40.000 2.64 0.00 0.00 2.32
1517 1707 4.094887 ACGTTGCTATAATTGGTGAAGCTG 59.905 41.667 0.00 0.00 34.28 4.24
1595 1787 3.921119 TCTCGTTTCGTTGGCTACTTA 57.079 42.857 0.00 0.00 0.00 2.24
1598 1790 2.297033 TCGTTTCGTTGGCTACTTAGGT 59.703 45.455 0.00 0.00 0.00 3.08
1605 1797 4.992951 TCGTTGGCTACTTAGGTCTTTTTC 59.007 41.667 0.00 0.00 0.00 2.29
1611 1803 6.107343 GGCTACTTAGGTCTTTTTCGAGAAT 58.893 40.000 0.00 0.00 0.00 2.40
1665 1857 3.248125 CGTCAGGTAGTAGGATCTCGTTC 59.752 52.174 0.00 0.00 0.00 3.95
1710 1903 1.026718 CCCGGTGTCAAGAGATTGGC 61.027 60.000 0.00 0.00 0.00 4.52
1714 1907 2.096496 CGGTGTCAAGAGATTGGCAATC 59.904 50.000 28.54 28.54 38.38 2.67
1763 2046 8.455903 ACATGGTGATGATATCCTTTTAGTTG 57.544 34.615 0.00 0.00 33.36 3.16
1816 2099 2.936498 AGTTTTAGCGCGAATATGCTGT 59.064 40.909 12.10 0.00 42.46 4.40
1818 2101 1.934589 TTAGCGCGAATATGCTGTGT 58.065 45.000 12.10 0.00 42.46 3.72
1820 2103 0.374758 AGCGCGAATATGCTGTGTTG 59.625 50.000 12.10 0.00 40.62 3.33
1821 2104 0.373370 GCGCGAATATGCTGTGTTGA 59.627 50.000 12.10 0.00 0.00 3.18
1822 2105 1.593070 GCGCGAATATGCTGTGTTGAG 60.593 52.381 12.10 0.00 0.00 3.02
1823 2106 1.004610 CGCGAATATGCTGTGTTGAGG 60.005 52.381 0.00 0.00 0.00 3.86
1824 2107 1.268234 GCGAATATGCTGTGTTGAGGC 60.268 52.381 0.00 0.00 0.00 4.70
1825 2108 2.283298 CGAATATGCTGTGTTGAGGCT 58.717 47.619 0.00 0.00 0.00 4.58
1826 2109 2.679837 CGAATATGCTGTGTTGAGGCTT 59.320 45.455 0.00 0.00 0.00 4.35
1827 2110 3.242543 CGAATATGCTGTGTTGAGGCTTC 60.243 47.826 0.00 0.00 0.00 3.86
1828 2111 2.857186 TATGCTGTGTTGAGGCTTCA 57.143 45.000 0.00 0.00 0.00 3.02
1829 2112 1.242076 ATGCTGTGTTGAGGCTTCAC 58.758 50.000 0.00 10.11 31.71 3.18
1830 2113 0.181114 TGCTGTGTTGAGGCTTCACT 59.819 50.000 0.00 0.00 31.71 3.41
1831 2114 0.871057 GCTGTGTTGAGGCTTCACTC 59.129 55.000 0.00 0.00 37.99 3.51
1832 2115 1.811558 GCTGTGTTGAGGCTTCACTCA 60.812 52.381 0.00 0.00 45.22 3.41
1833 2116 1.869767 CTGTGTTGAGGCTTCACTCAC 59.130 52.381 19.40 19.40 46.44 3.51
1834 2117 1.230324 GTGTTGAGGCTTCACTCACC 58.770 55.000 16.97 1.37 46.44 4.02
1835 2118 0.836606 TGTTGAGGCTTCACTCACCA 59.163 50.000 0.00 0.00 46.44 4.17
1836 2119 1.230324 GTTGAGGCTTCACTCACCAC 58.770 55.000 0.00 0.00 46.44 4.16
1837 2120 1.131638 TTGAGGCTTCACTCACCACT 58.868 50.000 0.00 0.00 46.44 4.00
1838 2121 0.681733 TGAGGCTTCACTCACCACTC 59.318 55.000 0.00 0.00 42.26 3.51
1839 2122 0.036858 GAGGCTTCACTCACCACTCC 60.037 60.000 0.00 0.00 37.44 3.85
1856 2139 2.954318 ACTCCAAGGCATGCATGATAAC 59.046 45.455 30.64 15.66 0.00 1.89
1868 2151 3.126858 TGCATGATAACGGCTTTCAACTC 59.873 43.478 0.00 0.00 0.00 3.01
1876 2159 1.600413 CGGCTTTCAACTCCAACTTGC 60.600 52.381 0.00 0.00 0.00 4.01
1919 2203 2.863809 ACCACCATCCTGTTTGTTCTC 58.136 47.619 0.00 0.00 0.00 2.87
1991 2275 0.247736 ACGCATTCTCTTTCTCGCCT 59.752 50.000 0.00 0.00 0.00 5.52
2045 2329 4.432712 CTTTCCAAGAACTTGTGTTTGGG 58.567 43.478 12.54 0.00 38.85 4.12
2081 2365 1.135546 TGCCACGTGTTTCAGTTTGTG 60.136 47.619 15.65 0.00 0.00 3.33
2240 2524 2.569059 CTCAGTGATTGCCTACATGGG 58.431 52.381 0.00 0.00 36.00 4.00
2264 2548 6.597280 GGTTTCTTCTCTCAGCTATCATTGTT 59.403 38.462 0.00 0.00 0.00 2.83
2267 2551 6.804677 TCTTCTCTCAGCTATCATTGTTCTC 58.195 40.000 0.00 0.00 0.00 2.87
2390 2674 1.447489 CCGAGCTGTCAGAAGGCTG 60.447 63.158 3.32 0.00 43.67 4.85
2414 2698 3.780850 CTGGTCCTAATAACAGGGTTCCT 59.219 47.826 0.00 0.00 36.26 3.36
2444 2728 6.040054 CAGATGGAAATATTGATGACTTGGCA 59.960 38.462 0.00 0.00 0.00 4.92
2642 2926 5.534278 TCACTTGGTTGAGAATGCAATTACA 59.466 36.000 0.00 0.00 36.07 2.41
2801 3085 3.719268 TGGTTGGACAGCATCTGTATT 57.281 42.857 0.00 0.00 45.44 1.89
2908 3194 5.368145 TGTTATCTGTGACATCTATTGCCC 58.632 41.667 0.00 0.00 0.00 5.36
3265 3552 7.989741 GGATTGTCCTGTATTATCTATCATGGG 59.010 40.741 0.00 0.00 32.53 4.00
3648 3935 7.387122 GGAGAACGTTTTACTATTGGAAGACTT 59.613 37.037 0.46 0.00 0.00 3.01
3783 4070 3.139077 CGGAGTATTTCCCCTTATGTGC 58.861 50.000 0.00 0.00 43.63 4.57
3958 4245 0.539986 TCGAGGGGTATTGCTCAACC 59.460 55.000 0.00 0.00 34.85 3.77
4339 4627 9.431887 TCTCATTTGGTTATCTTACACTTACAC 57.568 33.333 0.00 0.00 0.00 2.90
4490 4778 1.246649 TGCATCATTGGTTCGCTGTT 58.753 45.000 0.00 0.00 0.00 3.16
4604 4892 2.299521 AGAGATAGAGTACACGGTGGC 58.700 52.381 13.48 5.02 0.00 5.01
4798 5090 5.130292 ACTTCCTGCACATCATTTTTGAG 57.870 39.130 0.00 0.00 0.00 3.02
4813 5105 3.883830 TTTGAGCCTGCACAAAAGAAA 57.116 38.095 11.44 0.00 34.56 2.52
4820 5112 7.839907 TGAGCCTGCACAAAAGAAAATTATAT 58.160 30.769 0.00 0.00 0.00 0.86
4942 5235 7.598759 TGTCTCCTATATCAGAAGTAAACCC 57.401 40.000 0.00 0.00 0.00 4.11
4943 5236 7.363031 TGTCTCCTATATCAGAAGTAAACCCT 58.637 38.462 0.00 0.00 0.00 4.34
4944 5237 7.844779 TGTCTCCTATATCAGAAGTAAACCCTT 59.155 37.037 0.00 0.00 0.00 3.95
4966 5259 6.646240 CCTTTTTGGAGTGTGGTTGAATTATG 59.354 38.462 0.00 0.00 38.35 1.90
5020 5313 7.046292 ACTCCGCCTTTAAATTTTAAGTGTT 57.954 32.000 14.09 0.00 0.00 3.32
5023 5316 7.142680 TCCGCCTTTAAATTTTAAGTGTTCTG 58.857 34.615 14.09 1.62 0.00 3.02
5103 5581 4.764823 AGTACGGAAATTGCTTTTGGATCA 59.235 37.500 0.00 0.00 0.00 2.92
5109 5587 0.903942 TTGCTTTTGGATCATGGGGC 59.096 50.000 0.00 0.00 0.00 5.80
5161 5639 8.410912 AGTTTAATGTACATAGAGATGCGTACA 58.589 33.333 9.21 0.00 45.85 2.90
5164 5642 5.570234 TGTACATAGAGATGCGTACAACA 57.430 39.130 0.00 0.00 40.78 3.33
5206 5685 8.791675 TGATGAAATATGTTTTGTTGTGAGCTA 58.208 29.630 0.00 0.00 0.00 3.32
5207 5686 9.793252 GATGAAATATGTTTTGTTGTGAGCTAT 57.207 29.630 0.00 0.00 0.00 2.97
5337 5820 6.489603 TCTTTAAAAATCAGGCTCCATGGTA 58.510 36.000 12.58 0.00 0.00 3.25
5342 5825 2.254152 TCAGGCTCCATGGTACTCTT 57.746 50.000 12.58 0.00 0.00 2.85
5365 5848 9.541163 TCTTGGAGCAAGAAATCCTCTCTTGTT 62.541 40.741 12.69 7.80 45.84 2.83
5375 5858 9.482175 AGAAATCCTCTCTTGTTAGTATACACT 57.518 33.333 5.50 0.00 38.91 3.55
5378 5861 9.924010 AATCCTCTCTTGTTAGTATACACTAGT 57.076 33.333 5.50 0.00 38.49 2.57
5388 5871 9.577110 TGTTAGTATACACTAGTAAATGCACAC 57.423 33.333 5.50 0.00 38.49 3.82
5389 5872 8.740369 GTTAGTATACACTAGTAAATGCACACG 58.260 37.037 5.50 0.00 38.49 4.49
5390 5873 6.860080 AGTATACACTAGTAAATGCACACGT 58.140 36.000 5.50 0.00 33.13 4.49
5391 5874 6.750501 AGTATACACTAGTAAATGCACACGTG 59.249 38.462 15.48 15.48 33.13 4.49
5392 5875 4.328983 ATACACTAGTAAATGCACACGTGC 59.671 41.667 17.22 15.20 44.26 5.34
5407 5890 3.532138 GTGCAATGCGCGTTGATAT 57.468 47.368 39.16 8.27 46.97 1.63
5408 5891 1.826327 GTGCAATGCGCGTTGATATT 58.174 45.000 39.16 14.21 46.97 1.28
5409 5892 1.513994 GTGCAATGCGCGTTGATATTG 59.486 47.619 39.16 24.79 46.97 1.90
5410 5893 1.122849 GCAATGCGCGTTGATATTGG 58.877 50.000 39.16 16.54 32.59 3.16
5411 5894 1.757574 CAATGCGCGTTGATATTGGG 58.242 50.000 33.60 7.07 0.00 4.12
5412 5895 1.333308 CAATGCGCGTTGATATTGGGA 59.667 47.619 33.60 0.00 0.00 4.37
5413 5896 1.674359 ATGCGCGTTGATATTGGGAA 58.326 45.000 8.43 0.00 0.00 3.97
5414 5897 1.454201 TGCGCGTTGATATTGGGAAA 58.546 45.000 8.43 0.00 0.00 3.13
5415 5898 1.813178 TGCGCGTTGATATTGGGAAAA 59.187 42.857 8.43 0.00 0.00 2.29
5416 5899 2.425312 TGCGCGTTGATATTGGGAAAAT 59.575 40.909 8.43 0.00 0.00 1.82
5417 5900 3.119316 TGCGCGTTGATATTGGGAAAATT 60.119 39.130 8.43 0.00 0.00 1.82
5418 5901 3.242712 GCGCGTTGATATTGGGAAAATTG 59.757 43.478 8.43 0.00 0.00 2.32
5419 5902 4.667262 CGCGTTGATATTGGGAAAATTGA 58.333 39.130 0.00 0.00 0.00 2.57
5420 5903 5.280945 CGCGTTGATATTGGGAAAATTGAT 58.719 37.500 0.00 0.00 0.00 2.57
5421 5904 5.748152 CGCGTTGATATTGGGAAAATTGATT 59.252 36.000 0.00 0.00 0.00 2.57
5422 5905 6.291743 CGCGTTGATATTGGGAAAATTGATTG 60.292 38.462 0.00 0.00 0.00 2.67
5423 5906 6.509997 GCGTTGATATTGGGAAAATTGATTGC 60.510 38.462 0.00 0.00 0.00 3.56
5424 5907 6.534436 CGTTGATATTGGGAAAATTGATTGCA 59.466 34.615 0.00 0.00 0.00 4.08
5425 5908 7.464444 CGTTGATATTGGGAAAATTGATTGCAC 60.464 37.037 0.00 0.00 0.00 4.57
5426 5909 6.041511 TGATATTGGGAAAATTGATTGCACG 58.958 36.000 0.00 0.00 0.00 5.34
5427 5910 3.742433 TTGGGAAAATTGATTGCACGT 57.258 38.095 0.00 0.00 0.00 4.49
5428 5911 3.742433 TGGGAAAATTGATTGCACGTT 57.258 38.095 0.00 0.00 0.00 3.99
5429 5912 4.065321 TGGGAAAATTGATTGCACGTTT 57.935 36.364 0.00 0.00 0.00 3.60
5430 5913 4.446371 TGGGAAAATTGATTGCACGTTTT 58.554 34.783 0.00 0.00 0.00 2.43
5431 5914 5.601662 TGGGAAAATTGATTGCACGTTTTA 58.398 33.333 0.00 0.00 0.00 1.52
5432 5915 6.226787 TGGGAAAATTGATTGCACGTTTTAT 58.773 32.000 0.00 0.00 0.00 1.40
5433 5916 7.378966 TGGGAAAATTGATTGCACGTTTTATA 58.621 30.769 0.00 0.00 0.00 0.98
5434 5917 8.037758 TGGGAAAATTGATTGCACGTTTTATAT 58.962 29.630 0.00 0.00 0.00 0.86
5435 5918 8.878769 GGGAAAATTGATTGCACGTTTTATATT 58.121 29.630 0.00 0.00 0.00 1.28
5442 5925 8.373048 TGATTGCACGTTTTATATTAGGTAGG 57.627 34.615 0.00 0.00 0.00 3.18
5443 5926 7.442969 TGATTGCACGTTTTATATTAGGTAGGG 59.557 37.037 0.00 0.00 0.00 3.53
5444 5927 6.237887 TGCACGTTTTATATTAGGTAGGGT 57.762 37.500 0.00 0.00 0.00 4.34
5445 5928 7.358770 TGCACGTTTTATATTAGGTAGGGTA 57.641 36.000 0.00 0.00 0.00 3.69
5446 5929 7.965718 TGCACGTTTTATATTAGGTAGGGTAT 58.034 34.615 0.00 0.00 0.00 2.73
5447 5930 8.090214 TGCACGTTTTATATTAGGTAGGGTATC 58.910 37.037 0.00 0.00 0.00 2.24
5448 5931 8.090214 GCACGTTTTATATTAGGTAGGGTATCA 58.910 37.037 0.00 0.00 0.00 2.15
5449 5932 9.635520 CACGTTTTATATTAGGTAGGGTATCAG 57.364 37.037 0.00 0.00 0.00 2.90
5450 5933 9.372189 ACGTTTTATATTAGGTAGGGTATCAGT 57.628 33.333 0.00 0.00 0.00 3.41
5451 5934 9.852091 CGTTTTATATTAGGTAGGGTATCAGTC 57.148 37.037 0.00 0.00 0.00 3.51
5455 5938 5.746990 ATTAGGTAGGGTATCAGTCATGC 57.253 43.478 0.00 0.00 0.00 4.06
5456 5939 1.964223 AGGTAGGGTATCAGTCATGCG 59.036 52.381 0.00 0.00 0.00 4.73
5457 5940 1.687123 GGTAGGGTATCAGTCATGCGT 59.313 52.381 0.00 0.00 0.00 5.24
5458 5941 2.102588 GGTAGGGTATCAGTCATGCGTT 59.897 50.000 0.00 0.00 0.00 4.84
5459 5942 3.319972 GGTAGGGTATCAGTCATGCGTTA 59.680 47.826 0.00 0.00 0.00 3.18
5460 5943 4.202182 GGTAGGGTATCAGTCATGCGTTAA 60.202 45.833 0.00 0.00 0.00 2.01
5461 5944 4.689612 AGGGTATCAGTCATGCGTTAAT 57.310 40.909 0.00 0.00 0.00 1.40
5462 5945 5.036117 AGGGTATCAGTCATGCGTTAATT 57.964 39.130 0.00 0.00 0.00 1.40
5463 5946 6.169557 AGGGTATCAGTCATGCGTTAATTA 57.830 37.500 0.00 0.00 0.00 1.40
5464 5947 6.769512 AGGGTATCAGTCATGCGTTAATTAT 58.230 36.000 0.00 0.00 0.00 1.28
5465 5948 6.650807 AGGGTATCAGTCATGCGTTAATTATG 59.349 38.462 0.00 0.00 0.00 1.90
5466 5949 6.426937 GGGTATCAGTCATGCGTTAATTATGT 59.573 38.462 0.00 0.00 0.00 2.29
5467 5950 7.290842 GGTATCAGTCATGCGTTAATTATGTG 58.709 38.462 0.00 0.00 0.00 3.21
5468 5951 7.170828 GGTATCAGTCATGCGTTAATTATGTGA 59.829 37.037 0.00 0.00 0.00 3.58
5469 5952 7.734924 ATCAGTCATGCGTTAATTATGTGAT 57.265 32.000 0.00 0.00 0.00 3.06
5470 5953 7.552458 TCAGTCATGCGTTAATTATGTGATT 57.448 32.000 0.00 0.00 0.00 2.57
5471 5954 7.408910 TCAGTCATGCGTTAATTATGTGATTG 58.591 34.615 0.00 0.00 0.00 2.67
5472 5955 7.279758 TCAGTCATGCGTTAATTATGTGATTGA 59.720 33.333 0.00 0.00 31.40 2.57
5473 5956 7.374228 CAGTCATGCGTTAATTATGTGATTGAC 59.626 37.037 0.00 0.00 0.00 3.18
5474 5957 7.065683 AGTCATGCGTTAATTATGTGATTGACA 59.934 33.333 13.08 0.00 39.53 3.58
5485 5968 3.414549 GTGATTGACACCGTTGTTGTT 57.585 42.857 0.00 0.00 43.05 2.83
5486 5969 4.539509 GTGATTGACACCGTTGTTGTTA 57.460 40.909 0.00 0.00 43.05 2.41
5487 5970 5.103290 GTGATTGACACCGTTGTTGTTAT 57.897 39.130 0.00 0.00 43.05 1.89
5488 5971 5.516090 GTGATTGACACCGTTGTTGTTATT 58.484 37.500 0.00 0.00 43.05 1.40
5489 5972 5.974751 GTGATTGACACCGTTGTTGTTATTT 59.025 36.000 0.00 0.00 43.05 1.40
5490 5973 5.974158 TGATTGACACCGTTGTTGTTATTTG 59.026 36.000 0.00 0.00 35.47 2.32
5491 5974 4.294416 TGACACCGTTGTTGTTATTTGG 57.706 40.909 0.00 0.00 35.47 3.28
5492 5975 3.695060 TGACACCGTTGTTGTTATTTGGT 59.305 39.130 0.00 0.00 35.47 3.67
5493 5976 4.880120 TGACACCGTTGTTGTTATTTGGTA 59.120 37.500 0.00 0.00 35.47 3.25
5494 5977 5.531659 TGACACCGTTGTTGTTATTTGGTAT 59.468 36.000 0.00 0.00 35.47 2.73
5495 5978 5.764131 ACACCGTTGTTGTTATTTGGTATG 58.236 37.500 0.00 0.00 28.43 2.39
5496 5979 5.531659 ACACCGTTGTTGTTATTTGGTATGA 59.468 36.000 0.00 0.00 28.43 2.15
5497 5980 6.207810 ACACCGTTGTTGTTATTTGGTATGAT 59.792 34.615 0.00 0.00 28.43 2.45
5498 5981 7.390996 ACACCGTTGTTGTTATTTGGTATGATA 59.609 33.333 0.00 0.00 28.43 2.15
5499 5982 8.402472 CACCGTTGTTGTTATTTGGTATGATAT 58.598 33.333 0.00 0.00 0.00 1.63
5500 5983 8.962679 ACCGTTGTTGTTATTTGGTATGATATT 58.037 29.630 0.00 0.00 0.00 1.28
5534 6017 8.905103 GTTAAATATGTTTAACGCTCACCATT 57.095 30.769 18.33 0.00 45.52 3.16
5535 6018 8.794406 GTTAAATATGTTTAACGCTCACCATTG 58.206 33.333 18.33 0.00 45.52 2.82
5536 6019 3.848272 ATGTTTAACGCTCACCATTGG 57.152 42.857 0.00 0.00 0.00 3.16
5537 6020 2.852449 TGTTTAACGCTCACCATTGGA 58.148 42.857 10.37 0.00 0.00 3.53
5538 6021 2.811431 TGTTTAACGCTCACCATTGGAG 59.189 45.455 10.37 0.83 35.47 3.86
5547 6030 3.474600 CTCACCATTGGAGCAATCTAGG 58.525 50.000 10.37 0.00 31.05 3.02
5548 6031 2.846206 TCACCATTGGAGCAATCTAGGT 59.154 45.455 10.37 0.00 31.05 3.08
5549 6032 3.118261 TCACCATTGGAGCAATCTAGGTC 60.118 47.826 10.37 0.00 31.05 3.85
5550 6033 2.158900 ACCATTGGAGCAATCTAGGTCG 60.159 50.000 10.37 0.00 36.90 4.79
5551 6034 2.158900 CCATTGGAGCAATCTAGGTCGT 60.159 50.000 0.00 0.00 36.90 4.34
5552 6035 3.535561 CATTGGAGCAATCTAGGTCGTT 58.464 45.455 0.00 0.00 36.90 3.85
5553 6036 2.672961 TGGAGCAATCTAGGTCGTTG 57.327 50.000 0.00 0.00 36.90 4.10
5554 6037 1.207089 TGGAGCAATCTAGGTCGTTGG 59.793 52.381 0.00 0.00 36.90 3.77
5555 6038 1.480954 GGAGCAATCTAGGTCGTTGGA 59.519 52.381 0.00 0.00 36.90 3.53
5556 6039 2.103263 GGAGCAATCTAGGTCGTTGGAT 59.897 50.000 0.00 0.00 36.90 3.41
5557 6040 3.432326 GGAGCAATCTAGGTCGTTGGATT 60.432 47.826 0.00 0.00 36.90 3.01
5558 6041 3.535561 AGCAATCTAGGTCGTTGGATTG 58.464 45.455 14.20 14.20 44.31 2.67
5559 6042 3.197766 AGCAATCTAGGTCGTTGGATTGA 59.802 43.478 19.16 0.00 44.27 2.57
5560 6043 4.130118 GCAATCTAGGTCGTTGGATTGAT 58.870 43.478 19.16 1.07 44.27 2.57
5561 6044 5.070446 AGCAATCTAGGTCGTTGGATTGATA 59.930 40.000 19.16 0.00 44.27 2.15
5562 6045 5.934625 GCAATCTAGGTCGTTGGATTGATAT 59.065 40.000 19.16 0.00 44.27 1.63
5563 6046 6.128445 GCAATCTAGGTCGTTGGATTGATATG 60.128 42.308 19.16 3.17 44.27 1.78
5564 6047 5.468540 TCTAGGTCGTTGGATTGATATGG 57.531 43.478 0.00 0.00 0.00 2.74
5565 6048 4.899457 TCTAGGTCGTTGGATTGATATGGT 59.101 41.667 0.00 0.00 0.00 3.55
5566 6049 4.503714 AGGTCGTTGGATTGATATGGTT 57.496 40.909 0.00 0.00 0.00 3.67
5567 6050 4.855340 AGGTCGTTGGATTGATATGGTTT 58.145 39.130 0.00 0.00 0.00 3.27
5568 6051 4.640201 AGGTCGTTGGATTGATATGGTTTG 59.360 41.667 0.00 0.00 0.00 2.93
5569 6052 4.638421 GGTCGTTGGATTGATATGGTTTGA 59.362 41.667 0.00 0.00 0.00 2.69
5570 6053 5.299279 GGTCGTTGGATTGATATGGTTTGAT 59.701 40.000 0.00 0.00 0.00 2.57
5571 6054 6.201517 GTCGTTGGATTGATATGGTTTGATG 58.798 40.000 0.00 0.00 0.00 3.07
5572 6055 5.299028 TCGTTGGATTGATATGGTTTGATGG 59.701 40.000 0.00 0.00 0.00 3.51
5573 6056 5.291971 GTTGGATTGATATGGTTTGATGGC 58.708 41.667 0.00 0.00 0.00 4.40
5574 6057 3.896888 TGGATTGATATGGTTTGATGGCC 59.103 43.478 0.00 0.00 0.00 5.36
5575 6058 3.057315 GGATTGATATGGTTTGATGGCCG 60.057 47.826 0.00 0.00 0.00 6.13
5576 6059 3.289407 TTGATATGGTTTGATGGCCGA 57.711 42.857 0.00 0.00 0.00 5.54
5577 6060 2.849942 TGATATGGTTTGATGGCCGAG 58.150 47.619 0.00 0.00 0.00 4.63
5578 6061 2.437651 TGATATGGTTTGATGGCCGAGA 59.562 45.455 0.00 0.00 0.00 4.04
5579 6062 3.072915 TGATATGGTTTGATGGCCGAGAT 59.927 43.478 0.00 0.00 0.00 2.75
5580 6063 1.683943 ATGGTTTGATGGCCGAGATG 58.316 50.000 0.00 0.00 0.00 2.90
5581 6064 0.327924 TGGTTTGATGGCCGAGATGT 59.672 50.000 0.00 0.00 0.00 3.06
5582 6065 1.557371 TGGTTTGATGGCCGAGATGTA 59.443 47.619 0.00 0.00 0.00 2.29
5583 6066 2.172505 TGGTTTGATGGCCGAGATGTAT 59.827 45.455 0.00 0.00 0.00 2.29
5584 6067 3.214328 GGTTTGATGGCCGAGATGTATT 58.786 45.455 0.00 0.00 0.00 1.89
5585 6068 3.003689 GGTTTGATGGCCGAGATGTATTG 59.996 47.826 0.00 0.00 0.00 1.90
5586 6069 2.549064 TGATGGCCGAGATGTATTGG 57.451 50.000 0.00 0.00 0.00 3.16
5587 6070 2.046292 TGATGGCCGAGATGTATTGGA 58.954 47.619 0.00 0.00 0.00 3.53
5588 6071 2.639347 TGATGGCCGAGATGTATTGGAT 59.361 45.455 0.00 0.00 0.00 3.41
5589 6072 2.839486 TGGCCGAGATGTATTGGATC 57.161 50.000 0.00 0.00 0.00 3.36
5590 6073 2.329267 TGGCCGAGATGTATTGGATCT 58.671 47.619 0.00 0.00 32.63 2.75
5591 6074 2.037641 TGGCCGAGATGTATTGGATCTG 59.962 50.000 0.00 0.00 29.97 2.90
5592 6075 2.072298 GCCGAGATGTATTGGATCTGC 58.928 52.381 0.00 0.00 29.97 4.26
5593 6076 2.693069 CCGAGATGTATTGGATCTGCC 58.307 52.381 0.00 0.00 29.97 4.85
5594 6077 2.301296 CCGAGATGTATTGGATCTGCCT 59.699 50.000 0.00 0.00 37.63 4.75
5595 6078 3.583806 CGAGATGTATTGGATCTGCCTC 58.416 50.000 0.00 0.00 37.63 4.70
5596 6079 3.006217 CGAGATGTATTGGATCTGCCTCA 59.994 47.826 0.00 0.00 37.63 3.86
5597 6080 4.314121 GAGATGTATTGGATCTGCCTCAC 58.686 47.826 0.00 0.00 37.63 3.51
5598 6081 3.972638 AGATGTATTGGATCTGCCTCACT 59.027 43.478 0.00 0.00 37.63 3.41
5599 6082 3.548745 TGTATTGGATCTGCCTCACTG 57.451 47.619 0.00 0.00 37.63 3.66
5600 6083 2.171237 TGTATTGGATCTGCCTCACTGG 59.829 50.000 0.00 0.00 37.63 4.00
5601 6084 0.549950 ATTGGATCTGCCTCACTGGG 59.450 55.000 0.00 0.00 37.63 4.45
5602 6085 0.842030 TTGGATCTGCCTCACTGGGT 60.842 55.000 0.00 0.00 37.63 4.51
5603 6086 1.267574 TGGATCTGCCTCACTGGGTC 61.268 60.000 0.00 0.00 37.63 4.46
5604 6087 0.980231 GGATCTGCCTCACTGGGTCT 60.980 60.000 0.00 0.00 36.00 3.85
5605 6088 0.908198 GATCTGCCTCACTGGGTCTT 59.092 55.000 0.00 0.00 36.00 3.01
5606 6089 1.280421 GATCTGCCTCACTGGGTCTTT 59.720 52.381 0.00 0.00 36.00 2.52
5607 6090 1.140312 TCTGCCTCACTGGGTCTTTT 58.860 50.000 0.00 0.00 36.00 2.27
5608 6091 1.494721 TCTGCCTCACTGGGTCTTTTT 59.505 47.619 0.00 0.00 36.00 1.94
5609 6092 2.708861 TCTGCCTCACTGGGTCTTTTTA 59.291 45.455 0.00 0.00 36.00 1.52
5610 6093 3.330701 TCTGCCTCACTGGGTCTTTTTAT 59.669 43.478 0.00 0.00 36.00 1.40
5611 6094 4.534500 TCTGCCTCACTGGGTCTTTTTATA 59.466 41.667 0.00 0.00 36.00 0.98
5612 6095 5.191722 TCTGCCTCACTGGGTCTTTTTATAT 59.808 40.000 0.00 0.00 36.00 0.86
5613 6096 5.826643 TGCCTCACTGGGTCTTTTTATATT 58.173 37.500 0.00 0.00 36.00 1.28
5614 6097 5.652014 TGCCTCACTGGGTCTTTTTATATTG 59.348 40.000 0.00 0.00 36.00 1.90
5615 6098 5.067805 GCCTCACTGGGTCTTTTTATATTGG 59.932 44.000 0.00 0.00 36.00 3.16
5616 6099 6.187682 CCTCACTGGGTCTTTTTATATTGGT 58.812 40.000 0.00 0.00 0.00 3.67
5617 6100 7.343357 CCTCACTGGGTCTTTTTATATTGGTA 58.657 38.462 0.00 0.00 0.00 3.25
5618 6101 7.998964 CCTCACTGGGTCTTTTTATATTGGTAT 59.001 37.037 0.00 0.00 0.00 2.73
5795 6279 1.482593 CCTATCTCACTTGGCCGTCTT 59.517 52.381 0.00 0.00 0.00 3.01
5868 6352 7.012327 GCAATGGTAATTTGCTGATGAGTACTA 59.988 37.037 0.00 0.00 44.71 1.82
5873 6357 9.765795 GGTAATTTGCTGATGAGTACTACTTAT 57.234 33.333 0.00 0.00 0.00 1.73
5892 6376 6.514063 ACTTATCTTCCCTCGTTTGCTATAC 58.486 40.000 0.00 0.00 0.00 1.47
6108 6592 4.774726 TGCTCTATTGTCCTGAAGAGTTCT 59.225 41.667 0.00 0.00 38.18 3.01
6175 6659 6.101332 TCCAAGTATCTCATTTTGCATTTGC 58.899 36.000 0.00 0.00 42.50 3.68
6179 6663 4.546829 ATCTCATTTTGCATTTGCCAGT 57.453 36.364 0.00 0.00 41.18 4.00
6231 6721 8.982723 ACTCTAGTGTCTAACCATGAATAATGT 58.017 33.333 0.00 0.00 34.11 2.71
6449 6959 2.608752 GCCCTCAATGACTTTGCAGTTG 60.609 50.000 0.00 0.00 35.16 3.16
6463 6973 7.044798 ACTTTGCAGTTGCTTTTAAACCATTA 58.955 30.769 5.62 0.00 42.66 1.90
6478 6988 9.911138 TTTAAACCATTAAACCGGATAAACTTC 57.089 29.630 9.46 0.00 36.36 3.01
6482 6992 7.599171 ACCATTAAACCGGATAAACTTCTTTG 58.401 34.615 9.46 0.81 0.00 2.77
6505 7017 2.621070 ACCATGGGTAGGCACCTATAG 58.379 52.381 18.09 0.00 43.76 1.31
6509 7021 3.648683 TGGGTAGGCACCTATAGGAAT 57.351 47.619 26.01 9.92 45.04 3.01
6517 7029 3.808174 GGCACCTATAGGAATGTTCGAAC 59.192 47.826 26.01 21.42 38.94 3.95
6671 7183 1.271871 TGGGTCCTGCACGAAATCATT 60.272 47.619 0.00 0.00 0.00 2.57
6704 7216 2.423892 CACGAAGCTCCTTACTGCTCTA 59.576 50.000 0.00 0.00 38.75 2.43
6722 7234 3.637229 CTCTATGTGTCCCATACGTCCTT 59.363 47.826 0.00 0.00 34.86 3.36
6845 7357 1.696832 GCGGCAAGAGATTCCACGTC 61.697 60.000 0.00 0.00 0.00 4.34
6929 7441 2.920912 TTTGGCGAGGACTCCCGT 60.921 61.111 7.52 0.00 37.58 5.28
6941 7453 2.969806 CTCCCGTCGGTCGAACGAA 61.970 63.158 29.52 11.34 45.38 3.85
6968 7480 5.362143 TGATGAGACTCCAGGTTCATTAGAG 59.638 44.000 0.00 0.00 31.20 2.43
6990 7502 1.522580 GACCTTGCGCTGATCCCTC 60.523 63.158 9.73 0.00 0.00 4.30
7222 7743 0.035630 AGCTGATGGTCAACTGCCTC 60.036 55.000 6.51 0.00 0.00 4.70
7266 7787 6.147821 AGTCGTTGCTGAATGTATATATTGGC 59.852 38.462 0.00 4.98 0.00 4.52
7270 7791 5.178061 TGCTGAATGTATATATTGGCGGAG 58.822 41.667 0.00 0.00 0.00 4.63
7288 7809 4.113354 CGGAGCACCTAAGAAGACATAAC 58.887 47.826 0.00 0.00 0.00 1.89
7377 7901 2.485426 CACGTTGGACCTACTCGTTCTA 59.515 50.000 4.53 0.00 32.47 2.10
7408 7932 1.315690 ATGGAATGATCAGCTTGCGG 58.684 50.000 0.09 0.00 0.00 5.69
7421 7980 0.449388 CTTGCGGAATGCTCAGTTCC 59.551 55.000 0.00 0.00 46.63 3.62
7431 7990 1.403687 GCTCAGTTCCTAGGGCCGAT 61.404 60.000 9.46 0.00 0.00 4.18
7433 7992 1.227674 CAGTTCCTAGGGCCGATGC 60.228 63.158 9.46 0.00 0.00 3.91
7458 8017 1.942657 CCTTCATAGCCATCAACCACG 59.057 52.381 0.00 0.00 0.00 4.94
7459 8018 2.419990 CCTTCATAGCCATCAACCACGA 60.420 50.000 0.00 0.00 0.00 4.35
7463 8022 3.876914 TCATAGCCATCAACCACGATTTC 59.123 43.478 0.00 0.00 0.00 2.17
7600 8161 6.833041 TGACTTGTCTAGGTGTTTATGGAAA 58.167 36.000 2.35 0.00 0.00 3.13
7622 8183 2.619074 GCTAAGAATGACAGGCCCTTGT 60.619 50.000 0.00 0.00 0.00 3.16
7624 8185 4.687219 GCTAAGAATGACAGGCCCTTGTAT 60.687 45.833 0.00 0.00 0.00 2.29
7627 8188 3.392616 AGAATGACAGGCCCTTGTATAGG 59.607 47.826 0.00 0.00 44.33 2.57
7653 8214 0.955919 CCAGGGAAGCTCGTGGTTTC 60.956 60.000 3.18 1.04 37.76 2.78
7659 8221 1.192534 GAAGCTCGTGGTTTCAGTTCG 59.807 52.381 3.18 0.00 35.62 3.95
7709 8307 2.380064 ACAAGGACCAAATGGCTGAA 57.620 45.000 0.00 0.00 39.32 3.02
7714 8312 2.309755 AGGACCAAATGGCTGAAGATCA 59.690 45.455 0.00 0.00 39.32 2.92
7726 8324 1.005340 GAAGATCAAGCCGTGCTCAG 58.995 55.000 0.00 0.00 38.25 3.35
7739 8337 0.898326 TGCTCAGCTAACGAGGGACA 60.898 55.000 0.00 0.00 0.00 4.02
7778 8377 0.519077 CTTTGACAAGCGCTCCTTCC 59.481 55.000 12.06 0.00 0.00 3.46
7779 8378 0.108585 TTTGACAAGCGCTCCTTCCT 59.891 50.000 12.06 0.00 0.00 3.36
7780 8379 0.108585 TTGACAAGCGCTCCTTCCTT 59.891 50.000 12.06 0.00 0.00 3.36
7781 8380 0.320771 TGACAAGCGCTCCTTCCTTC 60.321 55.000 12.06 0.00 0.00 3.46
7807 8406 3.456280 GAGCACCATCAGAACTGATCTC 58.544 50.000 13.47 12.73 46.57 2.75
7869 8469 1.081242 CGCAAAAACTCGCCAGCAT 60.081 52.632 0.00 0.00 0.00 3.79
7870 8470 0.664166 CGCAAAAACTCGCCAGCATT 60.664 50.000 0.00 0.00 0.00 3.56
7900 8500 8.866970 ATGATGAATTGGTGTATACATATGCA 57.133 30.769 9.18 8.48 0.00 3.96
7901 8501 8.688747 TGATGAATTGGTGTATACATATGCAA 57.311 30.769 9.18 0.00 30.22 4.08
7902 8502 9.129532 TGATGAATTGGTGTATACATATGCAAA 57.870 29.630 9.18 0.00 30.22 3.68
7904 8504 9.917129 ATGAATTGGTGTATACATATGCAAATG 57.083 29.630 9.18 0.00 30.22 2.32
7905 8505 9.129532 TGAATTGGTGTATACATATGCAAATGA 57.870 29.630 9.18 0.00 30.22 2.57
7906 8506 9.616634 GAATTGGTGTATACATATGCAAATGAG 57.383 33.333 9.18 0.00 30.22 2.90
7907 8507 8.922931 ATTGGTGTATACATATGCAAATGAGA 57.077 30.769 9.18 0.00 30.22 3.27
7908 8508 8.744568 TTGGTGTATACATATGCAAATGAGAA 57.255 30.769 9.18 0.00 30.22 2.87
7909 8509 8.744568 TGGTGTATACATATGCAAATGAGAAA 57.255 30.769 9.18 0.00 30.22 2.52
7910 8510 8.839343 TGGTGTATACATATGCAAATGAGAAAG 58.161 33.333 9.18 0.00 30.22 2.62
7911 8511 9.056005 GGTGTATACATATGCAAATGAGAAAGA 57.944 33.333 9.18 0.00 30.22 2.52
7917 8517 8.515695 ACATATGCAAATGAGAAAGAAGATCA 57.484 30.769 1.58 0.00 0.00 2.92
7918 8518 8.404000 ACATATGCAAATGAGAAAGAAGATCAC 58.596 33.333 1.58 0.00 0.00 3.06
7919 8519 6.829229 ATGCAAATGAGAAAGAAGATCACA 57.171 33.333 0.00 0.00 0.00 3.58
7920 8520 6.829229 TGCAAATGAGAAAGAAGATCACAT 57.171 33.333 0.00 0.00 30.80 3.21
7921 8521 7.926674 TGCAAATGAGAAAGAAGATCACATA 57.073 32.000 0.00 0.00 29.67 2.29
7922 8522 8.339344 TGCAAATGAGAAAGAAGATCACATAA 57.661 30.769 0.00 0.00 29.67 1.90
7923 8523 8.239314 TGCAAATGAGAAAGAAGATCACATAAC 58.761 33.333 0.00 0.00 29.67 1.89
7924 8524 8.239314 GCAAATGAGAAAGAAGATCACATAACA 58.761 33.333 0.00 0.00 29.67 2.41
7929 8529 9.288576 TGAGAAAGAAGATCACATAACAAATGT 57.711 29.630 0.00 0.00 0.00 2.71
7945 8545 6.838198 ACAAATGTTATGATCAATGCATGC 57.162 33.333 11.82 11.82 0.00 4.06
7946 8546 6.578944 ACAAATGTTATGATCAATGCATGCT 58.421 32.000 20.33 1.07 0.00 3.79
7947 8547 6.478673 ACAAATGTTATGATCAATGCATGCTG 59.521 34.615 20.33 10.07 0.00 4.41
7948 8548 3.972403 TGTTATGATCAATGCATGCTGC 58.028 40.909 20.33 0.00 45.29 5.25
8016 8616 9.956720 AATTTGCCTCATCGATTAATTAAGAAG 57.043 29.630 3.94 0.00 0.00 2.85
8017 8617 8.731275 TTTGCCTCATCGATTAATTAAGAAGA 57.269 30.769 3.94 3.72 0.00 2.87
8018 8618 8.731275 TTGCCTCATCGATTAATTAAGAAGAA 57.269 30.769 3.94 0.00 0.00 2.52
8019 8619 8.370493 TGCCTCATCGATTAATTAAGAAGAAG 57.630 34.615 3.94 1.26 0.00 2.85
8020 8620 8.204160 TGCCTCATCGATTAATTAAGAAGAAGA 58.796 33.333 3.94 5.03 0.00 2.87
8021 8621 8.707839 GCCTCATCGATTAATTAAGAAGAAGAG 58.292 37.037 16.89 16.89 0.00 2.85
8022 8622 9.973450 CCTCATCGATTAATTAAGAAGAAGAGA 57.027 33.333 21.25 12.30 0.00 3.10
8028 8628 9.657121 CGATTAATTAAGAAGAAGAGAATTGCC 57.343 33.333 3.94 0.00 0.00 4.52
8029 8629 9.958234 GATTAATTAAGAAGAAGAGAATTGCCC 57.042 33.333 3.94 0.00 0.00 5.36
8030 8630 6.442513 AATTAAGAAGAAGAGAATTGCCCG 57.557 37.500 0.00 0.00 0.00 6.13
8031 8631 2.409948 AGAAGAAGAGAATTGCCCGG 57.590 50.000 0.00 0.00 0.00 5.73
8032 8632 1.630878 AGAAGAAGAGAATTGCCCGGT 59.369 47.619 0.00 0.00 0.00 5.28
8033 8633 2.040412 AGAAGAAGAGAATTGCCCGGTT 59.960 45.455 0.00 0.00 0.00 4.44
8034 8634 3.263425 AGAAGAAGAGAATTGCCCGGTTA 59.737 43.478 0.00 0.00 0.00 2.85
8035 8635 3.713826 AGAAGAGAATTGCCCGGTTAA 57.286 42.857 0.00 0.00 0.00 2.01
8036 8636 4.236527 AGAAGAGAATTGCCCGGTTAAT 57.763 40.909 0.00 0.00 0.00 1.40
8037 8637 4.600062 AGAAGAGAATTGCCCGGTTAATT 58.400 39.130 11.61 11.61 0.00 1.40
8038 8638 5.016831 AGAAGAGAATTGCCCGGTTAATTT 58.983 37.500 12.67 5.37 0.00 1.82
8039 8639 6.184789 AGAAGAGAATTGCCCGGTTAATTTA 58.815 36.000 12.67 0.00 0.00 1.40
8040 8640 5.830000 AGAGAATTGCCCGGTTAATTTAC 57.170 39.130 12.67 10.28 0.00 2.01
8041 8641 4.334481 AGAGAATTGCCCGGTTAATTTACG 59.666 41.667 12.67 0.00 0.00 3.18
8042 8642 3.379057 AGAATTGCCCGGTTAATTTACGG 59.621 43.478 12.67 7.84 46.79 4.02
8051 8651 4.725359 CGGTTAATTTACGGAAAACCAGG 58.275 43.478 11.98 0.00 39.66 4.45
8052 8652 4.487948 GGTTAATTTACGGAAAACCAGGC 58.512 43.478 7.46 0.00 39.51 4.85
8053 8653 4.022155 GGTTAATTTACGGAAAACCAGGCA 60.022 41.667 7.46 0.00 39.51 4.75
8054 8654 5.509332 GGTTAATTTACGGAAAACCAGGCAA 60.509 40.000 7.46 0.00 39.51 4.52
8055 8655 4.674281 AATTTACGGAAAACCAGGCAAA 57.326 36.364 0.00 0.00 0.00 3.68
8056 8656 4.674281 ATTTACGGAAAACCAGGCAAAA 57.326 36.364 0.00 0.00 0.00 2.44
8057 8657 4.467198 TTTACGGAAAACCAGGCAAAAA 57.533 36.364 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
164 169 1.803334 TTGGTCAGCGGATAACACAC 58.197 50.000 0.00 0.00 0.00 3.82
232 238 6.207691 ACCATGTGATATTTTAGCACCAAC 57.792 37.500 0.96 0.00 44.02 3.77
258 264 4.098807 GCCACCACCTAGAAAACAAGAAAA 59.901 41.667 0.00 0.00 0.00 2.29
265 271 1.534729 CCTGCCACCACCTAGAAAAC 58.465 55.000 0.00 0.00 0.00 2.43
306 312 3.070734 ACCAGCAGCAATCAGTCCTATAG 59.929 47.826 0.00 0.00 0.00 1.31
412 418 6.395629 TCTTTTAGTTCCGTATGTTCTCTGG 58.604 40.000 0.00 0.00 0.00 3.86
413 419 7.884816 TTCTTTTAGTTCCGTATGTTCTCTG 57.115 36.000 0.00 0.00 0.00 3.35
416 422 8.842358 TCAATTCTTTTAGTTCCGTATGTTCT 57.158 30.769 0.00 0.00 0.00 3.01
429 435 6.581171 AGCTTTCCCACTCAATTCTTTTAG 57.419 37.500 0.00 0.00 0.00 1.85
459 465 8.491958 AGGTCTCATAATTAATCGGGTACTTTT 58.508 33.333 0.00 0.00 0.00 2.27
511 568 6.438425 AGCTCCCTCATTCAATTTGTTTGTAT 59.562 34.615 0.00 0.00 36.65 2.29
514 571 5.143376 AGCTCCCTCATTCAATTTGTTTG 57.857 39.130 0.00 0.00 36.61 2.93
531 588 6.152379 CAGGTCAACAATTTCTTAAAGCTCC 58.848 40.000 0.00 0.00 0.00 4.70
539 596 4.277476 TGTGACCAGGTCAACAATTTCTT 58.723 39.130 24.65 0.00 44.49 2.52
632 690 5.011431 TGCACTAATCTATCCATCCTCTGTG 59.989 44.000 0.00 0.00 0.00 3.66
736 794 8.223177 TGACACATCATCAAATTATGCATGTA 57.777 30.769 10.16 0.00 31.90 2.29
745 803 6.995364 TGAAACCATGACACATCATCAAATT 58.005 32.000 0.00 0.00 44.13 1.82
767 825 6.459066 CGCTATCTATTTTTCCTCCTCATGA 58.541 40.000 0.00 0.00 0.00 3.07
768 826 5.641209 CCGCTATCTATTTTTCCTCCTCATG 59.359 44.000 0.00 0.00 0.00 3.07
770 828 4.899457 TCCGCTATCTATTTTTCCTCCTCA 59.101 41.667 0.00 0.00 0.00 3.86
790 874 7.402811 TCTAATCGTAAATAGTTGCAATCCG 57.597 36.000 0.59 0.00 0.00 4.18
807 891 7.794810 CGCGAGGATATAAGTATCTTCTAATCG 59.205 40.741 0.00 0.00 39.82 3.34
810 894 7.065563 GGTCGCGAGGATATAAGTATCTTCTAA 59.934 40.741 10.24 0.00 39.82 2.10
817 901 2.681848 CGGGTCGCGAGGATATAAGTAT 59.318 50.000 10.24 0.00 0.00 2.12
821 905 1.870055 GCCGGGTCGCGAGGATATAA 61.870 60.000 10.24 0.00 0.00 0.98
823 907 3.681835 GCCGGGTCGCGAGGATAT 61.682 66.667 10.24 0.00 0.00 1.63
1280 1400 2.692741 GGGGAGGGGAGGTCAAGG 60.693 72.222 0.00 0.00 0.00 3.61
1356 1497 1.995484 CCGGATGAATGATCGATTCCG 59.005 52.381 21.56 21.56 40.00 4.30
1391 1567 5.016173 CCAATTTCATTCCCAACCTACAGA 58.984 41.667 0.00 0.00 0.00 3.41
1393 1569 4.746466 ACCAATTTCATTCCCAACCTACA 58.254 39.130 0.00 0.00 0.00 2.74
1404 1587 3.181476 GGCGCCTATTGACCAATTTCATT 60.181 43.478 22.15 0.00 32.50 2.57
1407 1590 1.748493 TGGCGCCTATTGACCAATTTC 59.252 47.619 29.70 0.00 32.50 2.17
1441 1624 6.238759 GCACTAAATCACCCCTACATCAATTC 60.239 42.308 0.00 0.00 0.00 2.17
1443 1626 5.133221 GCACTAAATCACCCCTACATCAAT 58.867 41.667 0.00 0.00 0.00 2.57
1450 1640 2.769663 ACGATGCACTAAATCACCCCTA 59.230 45.455 0.00 0.00 0.00 3.53
1453 1643 3.131396 CCTACGATGCACTAAATCACCC 58.869 50.000 0.00 0.00 0.00 4.61
1462 1652 5.237344 GCTAAAATCATTCCTACGATGCACT 59.763 40.000 0.00 0.00 0.00 4.40
1467 1657 4.632153 AGCGCTAAAATCATTCCTACGAT 58.368 39.130 8.99 0.00 0.00 3.73
1493 1683 5.293324 CAGCTTCACCAATTATAGCAACGTA 59.707 40.000 0.00 0.00 34.37 3.57
1494 1684 4.094887 CAGCTTCACCAATTATAGCAACGT 59.905 41.667 0.00 0.00 34.37 3.99
1495 1685 4.591202 CAGCTTCACCAATTATAGCAACG 58.409 43.478 0.00 0.00 34.37 4.10
1496 1686 4.354587 GCAGCTTCACCAATTATAGCAAC 58.645 43.478 0.00 0.00 34.37 4.17
1508 1698 1.294659 CTCTGAACCGCAGCTTCACC 61.295 60.000 0.00 0.00 44.52 4.02
1517 1707 2.109126 GGACATGGCTCTGAACCGC 61.109 63.158 0.00 0.00 0.00 5.68
1564 1756 4.913335 ACGAAACGAGATCCTATTGCTA 57.087 40.909 0.00 0.00 0.00 3.49
1595 1787 4.938226 GGACATGATTCTCGAAAAAGACCT 59.062 41.667 0.00 0.00 0.00 3.85
1598 1790 5.355071 CCATGGACATGATTCTCGAAAAAGA 59.645 40.000 5.56 0.00 41.20 2.52
1605 1797 4.132336 ACATTCCATGGACATGATTCTCG 58.868 43.478 28.68 9.53 41.20 4.04
1641 1833 2.506444 GAGATCCTACTACCTGACGGG 58.494 57.143 0.00 0.00 41.89 5.28
1644 1836 3.248125 CGAACGAGATCCTACTACCTGAC 59.752 52.174 0.00 0.00 0.00 3.51
1665 1857 0.320771 ACCAAAGTAGCTCTGCCACG 60.321 55.000 0.00 0.00 0.00 4.94
1693 1886 1.522668 TTGCCAATCTCTTGACACCG 58.477 50.000 0.00 0.00 34.04 4.94
1710 1903 6.330278 CAGAATAGCATGGCCATATTGATTG 58.670 40.000 20.30 6.93 0.00 2.67
1714 1907 3.762288 AGCAGAATAGCATGGCCATATTG 59.238 43.478 20.30 9.52 36.85 1.90
1763 2046 1.003116 CAGGATTATGACGCAAGCAGC 60.003 52.381 0.00 0.00 45.62 5.25
1816 2099 3.706055 GGTGAGTGAAGCCTCAACA 57.294 52.632 1.51 0.00 46.35 3.33
1818 2101 1.070758 GAGTGGTGAGTGAAGCCTCAA 59.929 52.381 0.00 0.00 42.81 3.02
1820 2103 0.036858 GGAGTGGTGAGTGAAGCCTC 60.037 60.000 0.00 0.00 0.00 4.70
1821 2104 0.764369 TGGAGTGGTGAGTGAAGCCT 60.764 55.000 0.00 0.00 0.00 4.58
1822 2105 0.108585 TTGGAGTGGTGAGTGAAGCC 59.891 55.000 0.00 0.00 0.00 4.35
1823 2106 1.517242 CTTGGAGTGGTGAGTGAAGC 58.483 55.000 0.00 0.00 0.00 3.86
1824 2107 1.879796 GCCTTGGAGTGGTGAGTGAAG 60.880 57.143 0.00 0.00 0.00 3.02
1825 2108 0.108585 GCCTTGGAGTGGTGAGTGAA 59.891 55.000 0.00 0.00 0.00 3.18
1826 2109 1.053835 TGCCTTGGAGTGGTGAGTGA 61.054 55.000 0.00 0.00 0.00 3.41
1827 2110 0.037303 ATGCCTTGGAGTGGTGAGTG 59.963 55.000 0.00 0.00 0.00 3.51
1828 2111 0.037303 CATGCCTTGGAGTGGTGAGT 59.963 55.000 0.00 0.00 0.00 3.41
1829 2112 1.310933 GCATGCCTTGGAGTGGTGAG 61.311 60.000 6.36 0.00 0.00 3.51
1830 2113 1.303561 GCATGCCTTGGAGTGGTGA 60.304 57.895 6.36 0.00 0.00 4.02
1831 2114 0.968901 ATGCATGCCTTGGAGTGGTG 60.969 55.000 16.68 0.00 0.00 4.17
1832 2115 0.968901 CATGCATGCCTTGGAGTGGT 60.969 55.000 14.93 0.00 0.00 4.16
1833 2116 0.681887 TCATGCATGCCTTGGAGTGG 60.682 55.000 22.25 0.00 0.00 4.00
1834 2117 1.399714 ATCATGCATGCCTTGGAGTG 58.600 50.000 22.25 2.97 0.00 3.51
1835 2118 2.954318 GTTATCATGCATGCCTTGGAGT 59.046 45.455 22.25 5.96 0.00 3.85
1836 2119 2.031420 CGTTATCATGCATGCCTTGGAG 60.031 50.000 22.25 5.99 0.00 3.86
1837 2120 1.948834 CGTTATCATGCATGCCTTGGA 59.051 47.619 22.25 7.68 0.00 3.53
1838 2121 1.001048 CCGTTATCATGCATGCCTTGG 60.001 52.381 22.25 14.72 0.00 3.61
1839 2122 1.601162 GCCGTTATCATGCATGCCTTG 60.601 52.381 22.25 13.16 0.00 3.61
1856 2139 1.600413 GCAAGTTGGAGTTGAAAGCCG 60.600 52.381 4.75 0.00 30.18 5.52
1868 2151 0.385390 AGCCTTTTCGTGCAAGTTGG 59.615 50.000 4.75 0.00 0.00 3.77
1876 2159 1.359848 ACGCTATCAGCCTTTTCGTG 58.640 50.000 0.00 0.00 38.18 4.35
1919 2203 4.689071 GTTTGTTAAAACTGGAGTTGGGG 58.311 43.478 0.00 0.00 42.09 4.96
1943 2227 3.251004 AGACCTGAAAATCACAGAAACGC 59.749 43.478 0.00 0.00 37.54 4.84
1946 2230 6.017109 GCTTACAGACCTGAAAATCACAGAAA 60.017 38.462 3.76 0.00 37.54 2.52
1991 2275 2.767960 TGGAGCATTCTGAGCATAGACA 59.232 45.455 0.00 0.00 0.00 3.41
2045 2329 0.176449 GGCATGCTTTCATCCCAACC 59.824 55.000 18.92 0.00 30.61 3.77
2081 2365 2.477972 GAACAAAGGCAAGCCGGAGC 62.478 60.000 5.05 5.34 41.95 4.70
2240 2524 7.548780 AGAACAATGATAGCTGAGAGAAGAAAC 59.451 37.037 0.00 0.00 0.00 2.78
2264 2548 6.139671 AGAGGTAGCTCCAAGAAATATGAGA 58.860 40.000 18.14 0.00 39.02 3.27
2267 2551 8.964476 TTAAAGAGGTAGCTCCAAGAAATATG 57.036 34.615 18.14 0.00 39.02 1.78
2390 2674 1.844497 ACCCTGTTATTAGGACCAGCC 59.156 52.381 0.00 0.00 40.42 4.85
2414 2698 2.929641 TCAATATTTCCATCTGCGCCA 58.070 42.857 4.18 0.00 0.00 5.69
2417 2701 5.936686 AGTCATCAATATTTCCATCTGCG 57.063 39.130 0.00 0.00 0.00 5.18
2801 3085 5.520343 GGAGGGGACATAGTAGGGATAATCA 60.520 48.000 0.00 0.00 0.00 2.57
2908 3194 6.506500 AATGCATCTAACAGTCTGGAAAAG 57.493 37.500 0.00 0.00 0.00 2.27
2939 3225 6.377996 CCAATGAGGACACCAAGATTGAATAA 59.622 38.462 0.00 0.00 41.22 1.40
3265 3552 3.070748 GACTGGAGGCTGAAGAGAAAAC 58.929 50.000 0.00 0.00 0.00 2.43
3648 3935 2.849942 AGTATTGCAGCGATGCCATAA 58.150 42.857 24.65 11.55 0.00 1.90
3783 4070 0.606401 AGACATCAAGCCACCAACCG 60.606 55.000 0.00 0.00 0.00 4.44
4275 4562 4.272504 GCTCAATGAAAACGATATCGGGAA 59.727 41.667 27.58 9.89 44.95 3.97
4339 4627 4.158384 GCAATAACACGTCAATGAACAGG 58.842 43.478 0.00 0.00 0.00 4.00
4490 4778 0.988145 AGCCTAGTGCCCAGCCAATA 60.988 55.000 0.21 0.00 42.71 1.90
4604 4892 3.922426 TGGGGCTACCATTTCCATG 57.078 52.632 0.00 0.00 46.80 3.66
4780 5068 2.232941 AGGCTCAAAAATGATGTGCAGG 59.767 45.455 0.00 0.00 38.64 4.85
4798 5090 9.759259 GAAAATATAATTTTCTTTTGTGCAGGC 57.241 29.630 14.80 0.00 35.97 4.85
4932 5225 5.451381 CCACACTCCAAAAAGGGTTTACTTC 60.451 44.000 0.00 0.00 38.24 3.01
4940 5233 2.383855 TCAACCACACTCCAAAAAGGG 58.616 47.619 0.00 0.00 38.24 3.95
4942 5235 7.209475 ACATAATTCAACCACACTCCAAAAAG 58.791 34.615 0.00 0.00 0.00 2.27
4943 5236 7.118496 ACATAATTCAACCACACTCCAAAAA 57.882 32.000 0.00 0.00 0.00 1.94
4944 5237 6.723298 ACATAATTCAACCACACTCCAAAA 57.277 33.333 0.00 0.00 0.00 2.44
5000 5293 7.924103 ACAGAACACTTAAAATTTAAAGGCG 57.076 32.000 0.00 0.00 0.00 5.52
5015 5308 0.846693 AGGGGCTTCAACAGAACACT 59.153 50.000 0.00 0.00 0.00 3.55
5016 5309 1.239347 GAGGGGCTTCAACAGAACAC 58.761 55.000 0.00 0.00 0.00 3.32
5017 5310 0.110486 GGAGGGGCTTCAACAGAACA 59.890 55.000 0.00 0.00 0.00 3.18
5020 5313 1.151810 AGGGAGGGGCTTCAACAGA 60.152 57.895 0.00 0.00 0.00 3.41
5023 5316 1.501654 AAGGAGGGAGGGGCTTCAAC 61.502 60.000 0.00 0.00 0.00 3.18
5082 5560 5.394005 CCATGATCCAAAAGCAATTTCCGTA 60.394 40.000 0.00 0.00 0.00 4.02
5109 5587 3.083349 TGACGGGCTCCATGGAGG 61.083 66.667 36.92 25.00 42.19 4.30
5235 5714 7.622893 TTTCATAGCAAATAGTACATGTGCA 57.377 32.000 16.62 2.82 37.68 4.57
5309 5792 6.096673 TGGAGCCTGATTTTTAAAGAAACC 57.903 37.500 0.00 0.00 0.00 3.27
5310 5793 6.591448 CCATGGAGCCTGATTTTTAAAGAAAC 59.409 38.462 5.56 0.00 0.00 2.78
5313 5796 5.332743 ACCATGGAGCCTGATTTTTAAAGA 58.667 37.500 21.47 0.00 0.00 2.52
5314 5797 5.665916 ACCATGGAGCCTGATTTTTAAAG 57.334 39.130 21.47 0.00 0.00 1.85
5315 5798 6.252995 AGTACCATGGAGCCTGATTTTTAAA 58.747 36.000 21.47 0.00 0.00 1.52
5318 5801 4.018050 AGAGTACCATGGAGCCTGATTTTT 60.018 41.667 21.47 0.00 0.00 1.94
5319 5802 3.525199 AGAGTACCATGGAGCCTGATTTT 59.475 43.478 21.47 0.00 0.00 1.82
5320 5803 3.118531 AGAGTACCATGGAGCCTGATTT 58.881 45.455 21.47 0.00 0.00 2.17
5321 5804 2.769209 AGAGTACCATGGAGCCTGATT 58.231 47.619 21.47 0.00 0.00 2.57
5322 5805 2.437281 CAAGAGTACCATGGAGCCTGAT 59.563 50.000 21.47 0.00 0.00 2.90
5323 5806 1.833630 CAAGAGTACCATGGAGCCTGA 59.166 52.381 21.47 0.00 0.00 3.86
5324 5807 1.134280 CCAAGAGTACCATGGAGCCTG 60.134 57.143 21.47 7.48 36.27 4.85
5325 5808 1.207791 CCAAGAGTACCATGGAGCCT 58.792 55.000 21.47 10.57 36.27 4.58
5342 5825 3.947868 CAAGAGAGGATTTCTTGCTCCA 58.052 45.455 2.46 0.00 43.47 3.86
5365 5848 7.911727 CACGTGTGCATTTACTAGTGTATACTA 59.088 37.037 7.58 0.00 38.36 1.82
5366 5849 6.750501 CACGTGTGCATTTACTAGTGTATACT 59.249 38.462 7.58 0.00 40.99 2.12
5367 5850 6.919188 CACGTGTGCATTTACTAGTGTATAC 58.081 40.000 7.58 0.00 0.00 1.47
5386 5869 3.451828 CAACGCGCATTGCACGTG 61.452 61.111 23.59 12.28 46.47 4.49
5388 5871 0.316114 ATATCAACGCGCATTGCACG 60.316 50.000 12.07 16.80 46.97 5.34
5389 5872 1.513994 CAATATCAACGCGCATTGCAC 59.486 47.619 12.07 0.00 46.97 4.57
5390 5873 1.533547 CCAATATCAACGCGCATTGCA 60.534 47.619 12.07 1.79 46.97 4.08
5391 5874 1.122849 CCAATATCAACGCGCATTGC 58.877 50.000 12.07 0.00 41.47 3.56
5392 5875 1.333308 TCCCAATATCAACGCGCATTG 59.667 47.619 10.48 10.48 0.00 2.82
5393 5876 1.674359 TCCCAATATCAACGCGCATT 58.326 45.000 5.73 0.00 0.00 3.56
5394 5877 1.674359 TTCCCAATATCAACGCGCAT 58.326 45.000 5.73 0.00 0.00 4.73
5395 5878 1.454201 TTTCCCAATATCAACGCGCA 58.546 45.000 5.73 0.00 0.00 6.09
5396 5879 2.553079 TTTTCCCAATATCAACGCGC 57.447 45.000 5.73 0.00 0.00 6.86
5397 5880 4.667262 TCAATTTTCCCAATATCAACGCG 58.333 39.130 3.53 3.53 0.00 6.01
5398 5881 6.509997 GCAATCAATTTTCCCAATATCAACGC 60.510 38.462 0.00 0.00 0.00 4.84
5399 5882 6.534436 TGCAATCAATTTTCCCAATATCAACG 59.466 34.615 0.00 0.00 0.00 4.10
5400 5883 7.464444 CGTGCAATCAATTTTCCCAATATCAAC 60.464 37.037 0.00 0.00 0.00 3.18
5401 5884 6.534436 CGTGCAATCAATTTTCCCAATATCAA 59.466 34.615 0.00 0.00 0.00 2.57
5402 5885 6.041511 CGTGCAATCAATTTTCCCAATATCA 58.958 36.000 0.00 0.00 0.00 2.15
5403 5886 6.042143 ACGTGCAATCAATTTTCCCAATATC 58.958 36.000 0.00 0.00 0.00 1.63
5404 5887 5.976458 ACGTGCAATCAATTTTCCCAATAT 58.024 33.333 0.00 0.00 0.00 1.28
5405 5888 5.398603 ACGTGCAATCAATTTTCCCAATA 57.601 34.783 0.00 0.00 0.00 1.90
5406 5889 4.270245 ACGTGCAATCAATTTTCCCAAT 57.730 36.364 0.00 0.00 0.00 3.16
5407 5890 3.742433 ACGTGCAATCAATTTTCCCAA 57.258 38.095 0.00 0.00 0.00 4.12
5408 5891 3.742433 AACGTGCAATCAATTTTCCCA 57.258 38.095 0.00 0.00 0.00 4.37
5409 5892 6.720012 ATAAAACGTGCAATCAATTTTCCC 57.280 33.333 0.00 0.00 30.21 3.97
5416 5899 8.832521 CCTACCTAATATAAAACGTGCAATCAA 58.167 33.333 0.00 0.00 0.00 2.57
5417 5900 7.442969 CCCTACCTAATATAAAACGTGCAATCA 59.557 37.037 0.00 0.00 0.00 2.57
5418 5901 7.443272 ACCCTACCTAATATAAAACGTGCAATC 59.557 37.037 0.00 0.00 0.00 2.67
5419 5902 7.284820 ACCCTACCTAATATAAAACGTGCAAT 58.715 34.615 0.00 0.00 0.00 3.56
5420 5903 6.652053 ACCCTACCTAATATAAAACGTGCAA 58.348 36.000 0.00 0.00 0.00 4.08
5421 5904 6.237887 ACCCTACCTAATATAAAACGTGCA 57.762 37.500 0.00 0.00 0.00 4.57
5422 5905 8.090214 TGATACCCTACCTAATATAAAACGTGC 58.910 37.037 0.00 0.00 0.00 5.34
5423 5906 9.635520 CTGATACCCTACCTAATATAAAACGTG 57.364 37.037 0.00 0.00 0.00 4.49
5424 5907 9.372189 ACTGATACCCTACCTAATATAAAACGT 57.628 33.333 0.00 0.00 0.00 3.99
5425 5908 9.852091 GACTGATACCCTACCTAATATAAAACG 57.148 37.037 0.00 0.00 0.00 3.60
5429 5912 8.978472 GCATGACTGATACCCTACCTAATATAA 58.022 37.037 0.00 0.00 0.00 0.98
5430 5913 7.284716 CGCATGACTGATACCCTACCTAATATA 59.715 40.741 0.00 0.00 0.00 0.86
5431 5914 6.096987 CGCATGACTGATACCCTACCTAATAT 59.903 42.308 0.00 0.00 0.00 1.28
5432 5915 5.417894 CGCATGACTGATACCCTACCTAATA 59.582 44.000 0.00 0.00 0.00 0.98
5433 5916 4.220821 CGCATGACTGATACCCTACCTAAT 59.779 45.833 0.00 0.00 0.00 1.73
5434 5917 3.572682 CGCATGACTGATACCCTACCTAA 59.427 47.826 0.00 0.00 0.00 2.69
5435 5918 3.154710 CGCATGACTGATACCCTACCTA 58.845 50.000 0.00 0.00 0.00 3.08
5436 5919 1.964223 CGCATGACTGATACCCTACCT 59.036 52.381 0.00 0.00 0.00 3.08
5437 5920 1.687123 ACGCATGACTGATACCCTACC 59.313 52.381 0.00 0.00 0.00 3.18
5438 5921 3.454371 AACGCATGACTGATACCCTAC 57.546 47.619 0.00 0.00 0.00 3.18
5439 5922 5.801531 ATTAACGCATGACTGATACCCTA 57.198 39.130 0.00 0.00 0.00 3.53
5440 5923 4.689612 ATTAACGCATGACTGATACCCT 57.310 40.909 0.00 0.00 0.00 4.34
5441 5924 6.426937 ACATAATTAACGCATGACTGATACCC 59.573 38.462 0.00 0.00 0.00 3.69
5442 5925 7.170828 TCACATAATTAACGCATGACTGATACC 59.829 37.037 0.00 0.00 0.00 2.73
5443 5926 8.072238 TCACATAATTAACGCATGACTGATAC 57.928 34.615 0.00 0.00 0.00 2.24
5444 5927 8.831715 ATCACATAATTAACGCATGACTGATA 57.168 30.769 0.00 0.00 0.00 2.15
5445 5928 7.734924 ATCACATAATTAACGCATGACTGAT 57.265 32.000 0.00 0.00 0.00 2.90
5446 5929 7.279758 TCAATCACATAATTAACGCATGACTGA 59.720 33.333 0.00 0.00 0.00 3.41
5447 5930 7.374228 GTCAATCACATAATTAACGCATGACTG 59.626 37.037 0.00 0.00 31.94 3.51
5448 5931 7.065683 TGTCAATCACATAATTAACGCATGACT 59.934 33.333 0.00 0.00 34.81 3.41
5449 5932 7.164171 GTGTCAATCACATAATTAACGCATGAC 59.836 37.037 0.00 10.96 45.51 3.06
5450 5933 7.186128 GTGTCAATCACATAATTAACGCATGA 58.814 34.615 0.00 0.00 45.51 3.07
5451 5934 7.367458 GTGTCAATCACATAATTAACGCATG 57.633 36.000 0.00 0.00 45.51 4.06
5465 5948 3.414549 AACAACAACGGTGTCAATCAC 57.585 42.857 6.54 0.00 45.47 3.06
5466 5949 5.759506 AATAACAACAACGGTGTCAATCA 57.240 34.783 6.54 0.00 36.80 2.57
5467 5950 5.401079 CCAAATAACAACAACGGTGTCAATC 59.599 40.000 6.54 0.00 36.80 2.67
5468 5951 5.163499 ACCAAATAACAACAACGGTGTCAAT 60.163 36.000 6.54 0.00 36.80 2.57
5469 5952 4.158025 ACCAAATAACAACAACGGTGTCAA 59.842 37.500 6.54 0.00 36.80 3.18
5470 5953 3.695060 ACCAAATAACAACAACGGTGTCA 59.305 39.130 6.54 0.00 36.80 3.58
5471 5954 4.295857 ACCAAATAACAACAACGGTGTC 57.704 40.909 6.54 0.00 36.80 3.67
5472 5955 5.531659 TCATACCAAATAACAACAACGGTGT 59.468 36.000 0.00 0.00 40.75 4.16
5473 5956 6.003234 TCATACCAAATAACAACAACGGTG 57.997 37.500 0.00 0.00 0.00 4.94
5474 5957 6.827586 ATCATACCAAATAACAACAACGGT 57.172 33.333 0.00 0.00 0.00 4.83
5510 5993 7.971168 CCAATGGTGAGCGTTAAACATATTTAA 59.029 33.333 0.00 0.00 37.83 1.52
5511 5994 7.337184 TCCAATGGTGAGCGTTAAACATATTTA 59.663 33.333 0.00 0.00 0.00 1.40
5512 5995 6.151985 TCCAATGGTGAGCGTTAAACATATTT 59.848 34.615 0.00 0.00 0.00 1.40
5513 5996 5.650266 TCCAATGGTGAGCGTTAAACATATT 59.350 36.000 0.00 0.00 0.00 1.28
5514 5997 5.189928 TCCAATGGTGAGCGTTAAACATAT 58.810 37.500 0.00 0.00 0.00 1.78
5515 5998 4.580868 TCCAATGGTGAGCGTTAAACATA 58.419 39.130 0.00 0.00 0.00 2.29
5516 5999 3.417101 TCCAATGGTGAGCGTTAAACAT 58.583 40.909 0.00 0.00 0.00 2.71
5517 6000 2.811431 CTCCAATGGTGAGCGTTAAACA 59.189 45.455 0.00 0.00 0.00 2.83
5518 6001 2.414161 GCTCCAATGGTGAGCGTTAAAC 60.414 50.000 5.41 0.00 45.05 2.01
5519 6002 1.810151 GCTCCAATGGTGAGCGTTAAA 59.190 47.619 5.41 0.00 45.05 1.52
5520 6003 1.448985 GCTCCAATGGTGAGCGTTAA 58.551 50.000 5.41 0.00 45.05 2.01
5521 6004 3.153024 GCTCCAATGGTGAGCGTTA 57.847 52.632 5.41 0.00 45.05 3.18
5522 6005 3.987404 GCTCCAATGGTGAGCGTT 58.013 55.556 5.41 0.00 45.05 4.84
5526 6009 3.118112 ACCTAGATTGCTCCAATGGTGAG 60.118 47.826 5.41 0.00 33.90 3.51
5527 6010 2.846206 ACCTAGATTGCTCCAATGGTGA 59.154 45.455 5.41 0.00 33.90 4.02
5528 6011 3.209410 GACCTAGATTGCTCCAATGGTG 58.791 50.000 0.00 0.00 33.90 4.17
5529 6012 2.158900 CGACCTAGATTGCTCCAATGGT 60.159 50.000 0.00 0.00 33.90 3.55
5530 6013 2.158900 ACGACCTAGATTGCTCCAATGG 60.159 50.000 0.00 0.00 33.90 3.16
5531 6014 3.185246 ACGACCTAGATTGCTCCAATG 57.815 47.619 0.00 0.00 33.90 2.82
5532 6015 3.535561 CAACGACCTAGATTGCTCCAAT 58.464 45.455 0.00 0.00 36.72 3.16
5533 6016 2.354704 CCAACGACCTAGATTGCTCCAA 60.355 50.000 0.00 0.00 0.00 3.53
5534 6017 1.207089 CCAACGACCTAGATTGCTCCA 59.793 52.381 0.00 0.00 0.00 3.86
5535 6018 1.480954 TCCAACGACCTAGATTGCTCC 59.519 52.381 0.00 0.00 0.00 4.70
5536 6019 2.961526 TCCAACGACCTAGATTGCTC 57.038 50.000 0.00 0.00 0.00 4.26
5537 6020 3.197766 TCAATCCAACGACCTAGATTGCT 59.802 43.478 6.69 0.00 43.33 3.91
5538 6021 3.531538 TCAATCCAACGACCTAGATTGC 58.468 45.455 6.69 0.00 43.33 3.56
5539 6022 6.369890 CCATATCAATCCAACGACCTAGATTG 59.630 42.308 5.44 5.44 44.44 2.67
5540 6023 6.043243 ACCATATCAATCCAACGACCTAGATT 59.957 38.462 0.00 0.00 0.00 2.40
5541 6024 5.544176 ACCATATCAATCCAACGACCTAGAT 59.456 40.000 0.00 0.00 0.00 1.98
5542 6025 4.899457 ACCATATCAATCCAACGACCTAGA 59.101 41.667 0.00 0.00 0.00 2.43
5543 6026 5.215252 ACCATATCAATCCAACGACCTAG 57.785 43.478 0.00 0.00 0.00 3.02
5544 6027 5.623956 AACCATATCAATCCAACGACCTA 57.376 39.130 0.00 0.00 0.00 3.08
5545 6028 4.503714 AACCATATCAATCCAACGACCT 57.496 40.909 0.00 0.00 0.00 3.85
5546 6029 4.638421 TCAAACCATATCAATCCAACGACC 59.362 41.667 0.00 0.00 0.00 4.79
5547 6030 5.811399 TCAAACCATATCAATCCAACGAC 57.189 39.130 0.00 0.00 0.00 4.34
5548 6031 5.299028 CCATCAAACCATATCAATCCAACGA 59.701 40.000 0.00 0.00 0.00 3.85
5549 6032 5.522456 CCATCAAACCATATCAATCCAACG 58.478 41.667 0.00 0.00 0.00 4.10
5550 6033 5.291971 GCCATCAAACCATATCAATCCAAC 58.708 41.667 0.00 0.00 0.00 3.77
5551 6034 4.344679 GGCCATCAAACCATATCAATCCAA 59.655 41.667 0.00 0.00 0.00 3.53
5552 6035 3.896888 GGCCATCAAACCATATCAATCCA 59.103 43.478 0.00 0.00 0.00 3.41
5553 6036 3.057315 CGGCCATCAAACCATATCAATCC 60.057 47.826 2.24 0.00 0.00 3.01
5554 6037 3.820467 TCGGCCATCAAACCATATCAATC 59.180 43.478 2.24 0.00 0.00 2.67
5555 6038 3.822735 CTCGGCCATCAAACCATATCAAT 59.177 43.478 2.24 0.00 0.00 2.57
5556 6039 3.118075 TCTCGGCCATCAAACCATATCAA 60.118 43.478 2.24 0.00 0.00 2.57
5557 6040 2.437651 TCTCGGCCATCAAACCATATCA 59.562 45.455 2.24 0.00 0.00 2.15
5558 6041 3.126001 TCTCGGCCATCAAACCATATC 57.874 47.619 2.24 0.00 0.00 1.63
5559 6042 3.181440 ACATCTCGGCCATCAAACCATAT 60.181 43.478 2.24 0.00 0.00 1.78
5560 6043 2.172505 ACATCTCGGCCATCAAACCATA 59.827 45.455 2.24 0.00 0.00 2.74
5561 6044 1.064463 ACATCTCGGCCATCAAACCAT 60.064 47.619 2.24 0.00 0.00 3.55
5562 6045 0.327924 ACATCTCGGCCATCAAACCA 59.672 50.000 2.24 0.00 0.00 3.67
5563 6046 2.325583 TACATCTCGGCCATCAAACC 57.674 50.000 2.24 0.00 0.00 3.27
5564 6047 3.003689 CCAATACATCTCGGCCATCAAAC 59.996 47.826 2.24 0.00 0.00 2.93
5565 6048 3.118075 TCCAATACATCTCGGCCATCAAA 60.118 43.478 2.24 0.00 0.00 2.69
5566 6049 2.437651 TCCAATACATCTCGGCCATCAA 59.562 45.455 2.24 0.00 0.00 2.57
5567 6050 2.046292 TCCAATACATCTCGGCCATCA 58.954 47.619 2.24 0.00 0.00 3.07
5568 6051 2.839486 TCCAATACATCTCGGCCATC 57.161 50.000 2.24 0.00 0.00 3.51
5569 6052 2.909006 AGATCCAATACATCTCGGCCAT 59.091 45.455 2.24 0.00 0.00 4.40
5570 6053 2.037641 CAGATCCAATACATCTCGGCCA 59.962 50.000 2.24 0.00 0.00 5.36
5571 6054 2.693069 CAGATCCAATACATCTCGGCC 58.307 52.381 0.00 0.00 0.00 6.13
5572 6055 2.072298 GCAGATCCAATACATCTCGGC 58.928 52.381 0.00 0.00 0.00 5.54
5573 6056 2.301296 AGGCAGATCCAATACATCTCGG 59.699 50.000 0.00 0.00 37.29 4.63
5574 6057 3.006217 TGAGGCAGATCCAATACATCTCG 59.994 47.826 0.00 0.00 37.29 4.04
5575 6058 4.040217 AGTGAGGCAGATCCAATACATCTC 59.960 45.833 0.00 0.00 37.29 2.75
5576 6059 3.972638 AGTGAGGCAGATCCAATACATCT 59.027 43.478 0.00 0.00 37.29 2.90
5577 6060 4.063689 CAGTGAGGCAGATCCAATACATC 58.936 47.826 0.00 0.00 37.29 3.06
5578 6061 3.181447 CCAGTGAGGCAGATCCAATACAT 60.181 47.826 0.00 0.00 37.29 2.29
5579 6062 2.171237 CCAGTGAGGCAGATCCAATACA 59.829 50.000 0.00 0.00 37.29 2.29
5580 6063 2.486191 CCCAGTGAGGCAGATCCAATAC 60.486 54.545 0.00 0.00 37.29 1.89
5581 6064 1.770658 CCCAGTGAGGCAGATCCAATA 59.229 52.381 0.00 0.00 37.29 1.90
5582 6065 0.549950 CCCAGTGAGGCAGATCCAAT 59.450 55.000 0.00 0.00 37.29 3.16
5583 6066 0.842030 ACCCAGTGAGGCAGATCCAA 60.842 55.000 0.00 0.00 37.29 3.53
5584 6067 1.229625 ACCCAGTGAGGCAGATCCA 60.230 57.895 0.00 0.00 37.29 3.41
5585 6068 0.980231 AGACCCAGTGAGGCAGATCC 60.980 60.000 0.00 0.00 35.39 3.36
5586 6069 0.908198 AAGACCCAGTGAGGCAGATC 59.092 55.000 0.00 0.00 35.39 2.75
5587 6070 1.366319 AAAGACCCAGTGAGGCAGAT 58.634 50.000 0.00 0.00 35.39 2.90
5588 6071 1.140312 AAAAGACCCAGTGAGGCAGA 58.860 50.000 0.00 0.00 35.39 4.26
5589 6072 1.986882 AAAAAGACCCAGTGAGGCAG 58.013 50.000 0.00 0.00 35.39 4.85
5590 6073 3.806949 ATAAAAAGACCCAGTGAGGCA 57.193 42.857 0.00 0.00 35.39 4.75
5591 6074 5.067805 CCAATATAAAAAGACCCAGTGAGGC 59.932 44.000 0.00 0.00 35.39 4.70
5592 6075 6.187682 ACCAATATAAAAAGACCCAGTGAGG 58.812 40.000 0.00 0.00 37.03 3.86
5593 6076 8.980481 ATACCAATATAAAAAGACCCAGTGAG 57.020 34.615 0.00 0.00 0.00 3.51
5795 6279 1.408969 GGGGAACAGCCTCAAAAACA 58.591 50.000 0.00 0.00 36.99 2.83
5868 6352 3.983044 AGCAAACGAGGGAAGATAAGT 57.017 42.857 0.00 0.00 0.00 2.24
5873 6357 4.222145 ACTTGTATAGCAAACGAGGGAAGA 59.778 41.667 0.00 0.00 36.53 2.87
5907 6391 6.048732 TGAAGCATCACTACATTAACCTCA 57.951 37.500 0.00 0.00 0.00 3.86
5933 6417 8.154649 TCAAGAGACAAGAAAACCAATAGTTC 57.845 34.615 0.00 0.00 37.88 3.01
5938 6422 7.000472 TCTGATCAAGAGACAAGAAAACCAAT 59.000 34.615 0.00 0.00 0.00 3.16
5939 6423 6.356556 TCTGATCAAGAGACAAGAAAACCAA 58.643 36.000 0.00 0.00 0.00 3.67
6108 6592 2.481441 ACCCATATTGACAGGAGAGCA 58.519 47.619 0.00 0.00 0.00 4.26
6175 6659 4.206477 TGTCAATCATAGACCACACTGG 57.794 45.455 0.00 0.00 45.02 4.00
6179 6663 3.609853 GCCTTGTCAATCATAGACCACA 58.390 45.455 0.00 0.00 35.15 4.17
6231 6721 6.113411 GGGATAACGAAGATCTGGAAAGAAA 58.887 40.000 0.00 0.00 0.00 2.52
6449 6959 8.649841 GTTTATCCGGTTTAATGGTTTAAAAGC 58.350 33.333 0.00 0.00 38.63 3.51
6463 6973 6.546772 TGGTTACAAAGAAGTTTATCCGGTTT 59.453 34.615 0.00 0.00 0.00 3.27
6478 6988 2.752903 GTGCCTACCCATGGTTACAAAG 59.247 50.000 11.73 0.00 37.09 2.77
6482 6992 3.489391 GGTGCCTACCCATGGTTAC 57.511 57.895 11.73 0.20 41.36 2.50
6505 7017 5.336744 TCAACAAAACAGTTCGAACATTCC 58.663 37.500 28.78 2.65 0.00 3.01
6509 7021 5.704888 ACAATCAACAAAACAGTTCGAACA 58.295 33.333 28.78 5.61 0.00 3.18
6517 7029 7.094848 ACCCAAGAAAAACAATCAACAAAACAG 60.095 33.333 0.00 0.00 0.00 3.16
6671 7183 0.468226 GCTTCGTGATGATGGGGGTA 59.532 55.000 0.00 0.00 0.00 3.69
6722 7234 2.197324 GGGAACACACCCCTTGCA 59.803 61.111 0.00 0.00 43.81 4.08
6761 7273 0.456312 GGTAGACTGCCGAGTTCACG 60.456 60.000 0.00 0.00 30.16 4.35
6929 7441 0.109458 CATCAGGTTCGTTCGACCGA 60.109 55.000 0.00 0.00 42.11 4.69
6990 7502 5.218885 GTCGTCATTGTCCTGATGATCTAG 58.781 45.833 0.00 0.00 41.78 2.43
7228 7749 2.828877 CAACGACTACCACAGGAACAA 58.171 47.619 0.00 0.00 0.00 2.83
7229 7750 1.539496 GCAACGACTACCACAGGAACA 60.539 52.381 0.00 0.00 0.00 3.18
7266 7787 2.969628 ATGTCTTCTTAGGTGCTCCG 57.030 50.000 0.00 0.00 39.05 4.63
7270 7791 5.086104 TCAGGTTATGTCTTCTTAGGTGC 57.914 43.478 0.00 0.00 0.00 5.01
7271 7792 6.644347 ACATCAGGTTATGTCTTCTTAGGTG 58.356 40.000 0.00 0.00 35.08 4.00
7278 7799 6.650807 TCAGAACAACATCAGGTTATGTCTTC 59.349 38.462 0.00 0.00 39.16 2.87
7279 7800 6.533730 TCAGAACAACATCAGGTTATGTCTT 58.466 36.000 0.00 0.00 39.16 3.01
7288 7809 6.149973 ACACATTACATCAGAACAACATCAGG 59.850 38.462 0.00 0.00 0.00 3.86
7377 7901 6.039493 GCTGATCATTCCATGAGATGAAAACT 59.961 38.462 12.85 0.38 43.53 2.66
7397 7921 0.393402 TGAGCATTCCGCAAGCTGAT 60.393 50.000 0.00 0.00 46.13 2.90
7408 7932 1.475930 GGCCCTAGGAACTGAGCATTC 60.476 57.143 11.48 0.00 41.52 2.67
7421 7980 1.300697 GGTAACGCATCGGCCCTAG 60.301 63.158 0.00 0.00 36.38 3.02
7431 7990 2.169561 TGATGGCTATGAAGGTAACGCA 59.830 45.455 0.00 0.00 46.39 5.24
7433 7992 3.560068 GGTTGATGGCTATGAAGGTAACG 59.440 47.826 0.00 0.00 46.39 3.18
7549 8108 6.764308 AGCTGCACATAGAAAAATACATGT 57.236 33.333 2.69 2.69 31.91 3.21
7570 8131 6.803154 AAACACCTAGACAAGTCATTAAGC 57.197 37.500 2.72 0.00 0.00 3.09
7600 8161 1.589414 AGGGCCTGTCATTCTTAGCT 58.411 50.000 4.50 0.00 0.00 3.32
7622 8183 4.371681 AGCTTCCCTGGTTTCTTCCTATA 58.628 43.478 0.00 0.00 0.00 1.31
7624 8185 2.572104 GAGCTTCCCTGGTTTCTTCCTA 59.428 50.000 0.00 0.00 0.00 2.94
7627 8188 1.270893 ACGAGCTTCCCTGGTTTCTTC 60.271 52.381 0.00 0.00 0.00 2.87
7630 8191 0.955919 CCACGAGCTTCCCTGGTTTC 60.956 60.000 0.00 0.00 29.18 2.78
7631 8192 1.073199 CCACGAGCTTCCCTGGTTT 59.927 57.895 0.00 0.00 29.18 3.27
7632 8193 1.705997 AACCACGAGCTTCCCTGGTT 61.706 55.000 10.80 10.80 41.31 3.67
7633 8194 1.705997 AAACCACGAGCTTCCCTGGT 61.706 55.000 0.00 0.00 38.74 4.00
7634 8195 0.955919 GAAACCACGAGCTTCCCTGG 60.956 60.000 0.00 0.00 0.00 4.45
7635 8196 0.250295 TGAAACCACGAGCTTCCCTG 60.250 55.000 0.00 0.00 0.00 4.45
7659 8221 9.931210 CCGATCCATAATAAGTTGTTTTAGTTC 57.069 33.333 0.00 0.00 0.00 3.01
7709 8307 1.449246 GCTGAGCACGGCTTGATCT 60.449 57.895 10.64 0.00 41.56 2.75
7726 8324 0.320697 ACCTGTTGTCCCTCGTTAGC 59.679 55.000 0.00 0.00 0.00 3.09
7739 8337 0.467844 TGTTGGCAGATGCACCTGTT 60.468 50.000 10.51 0.00 44.36 3.16
7869 8469 7.501844 TGTATACACCAATTCATCATACGGAA 58.498 34.615 0.08 0.00 0.00 4.30
7870 8470 7.056844 TGTATACACCAATTCATCATACGGA 57.943 36.000 0.08 0.00 0.00 4.69
7898 8498 8.239314 TGTTATGTGATCTTCTTTCTCATTTGC 58.761 33.333 0.00 0.00 31.71 3.68
7903 8503 9.288576 ACATTTGTTATGTGATCTTCTTTCTCA 57.711 29.630 0.00 0.00 0.00 3.27
7920 8520 8.198778 AGCATGCATTGATCATAACATTTGTTA 58.801 29.630 21.98 5.68 43.71 2.41
7921 8521 7.011016 CAGCATGCATTGATCATAACATTTGTT 59.989 33.333 21.98 1.08 41.73 2.83
7922 8522 6.478673 CAGCATGCATTGATCATAACATTTGT 59.521 34.615 21.98 0.00 0.00 2.83
7923 8523 6.876804 CAGCATGCATTGATCATAACATTTG 58.123 36.000 21.98 0.00 0.00 2.32
7945 8545 3.549299 AAAGAATCAACAGCTTCGCAG 57.451 42.857 0.00 0.00 0.00 5.18
7946 8546 3.988379 AAAAGAATCAACAGCTTCGCA 57.012 38.095 0.00 0.00 0.00 5.10
7990 8590 9.956720 CTTCTTAATTAATCGATGAGGCAAATT 57.043 29.630 0.00 2.13 0.00 1.82
7991 8591 9.342308 TCTTCTTAATTAATCGATGAGGCAAAT 57.658 29.630 0.00 0.00 0.00 2.32
7992 8592 8.731275 TCTTCTTAATTAATCGATGAGGCAAA 57.269 30.769 0.00 0.00 0.00 3.68
7993 8593 8.731275 TTCTTCTTAATTAATCGATGAGGCAA 57.269 30.769 0.00 0.00 0.00 4.52
7994 8594 8.204160 TCTTCTTCTTAATTAATCGATGAGGCA 58.796 33.333 0.00 0.00 0.00 4.75
7995 8595 8.594881 TCTTCTTCTTAATTAATCGATGAGGC 57.405 34.615 0.00 0.00 0.00 4.70
7996 8596 9.973450 TCTCTTCTTCTTAATTAATCGATGAGG 57.027 33.333 19.96 13.97 0.00 3.86
8002 8602 9.657121 GGCAATTCTCTTCTTCTTAATTAATCG 57.343 33.333 0.00 0.00 0.00 3.34
8003 8603 9.958234 GGGCAATTCTCTTCTTCTTAATTAATC 57.042 33.333 0.00 0.00 0.00 1.75
8004 8604 8.624776 CGGGCAATTCTCTTCTTCTTAATTAAT 58.375 33.333 0.00 0.00 0.00 1.40
8005 8605 7.067008 CCGGGCAATTCTCTTCTTCTTAATTAA 59.933 37.037 0.00 0.00 0.00 1.40
8006 8606 6.542370 CCGGGCAATTCTCTTCTTCTTAATTA 59.458 38.462 0.00 0.00 0.00 1.40
8007 8607 5.358160 CCGGGCAATTCTCTTCTTCTTAATT 59.642 40.000 0.00 0.00 0.00 1.40
8008 8608 4.884164 CCGGGCAATTCTCTTCTTCTTAAT 59.116 41.667 0.00 0.00 0.00 1.40
8009 8609 4.261801 CCGGGCAATTCTCTTCTTCTTAA 58.738 43.478 0.00 0.00 0.00 1.85
8010 8610 3.263425 ACCGGGCAATTCTCTTCTTCTTA 59.737 43.478 6.32 0.00 0.00 2.10
8011 8611 2.040412 ACCGGGCAATTCTCTTCTTCTT 59.960 45.455 6.32 0.00 0.00 2.52
8012 8612 1.630878 ACCGGGCAATTCTCTTCTTCT 59.369 47.619 6.32 0.00 0.00 2.85
8013 8613 2.115343 ACCGGGCAATTCTCTTCTTC 57.885 50.000 6.32 0.00 0.00 2.87
8014 8614 2.586648 AACCGGGCAATTCTCTTCTT 57.413 45.000 6.32 0.00 0.00 2.52
8015 8615 3.713826 TTAACCGGGCAATTCTCTTCT 57.286 42.857 6.32 0.00 0.00 2.85
8016 8616 4.983671 AATTAACCGGGCAATTCTCTTC 57.016 40.909 6.32 0.00 0.00 2.87
8017 8617 5.163693 CGTAAATTAACCGGGCAATTCTCTT 60.164 40.000 6.32 0.00 0.00 2.85
8018 8618 4.334481 CGTAAATTAACCGGGCAATTCTCT 59.666 41.667 6.32 0.00 0.00 3.10
8019 8619 4.496840 CCGTAAATTAACCGGGCAATTCTC 60.497 45.833 6.32 6.82 38.09 2.87
8020 8620 3.379057 CCGTAAATTAACCGGGCAATTCT 59.621 43.478 6.32 5.00 38.09 2.40
8021 8621 3.377798 TCCGTAAATTAACCGGGCAATTC 59.622 43.478 6.32 0.00 41.98 2.17
8022 8622 3.354467 TCCGTAAATTAACCGGGCAATT 58.646 40.909 6.32 8.10 41.98 2.32
8023 8623 3.002038 TCCGTAAATTAACCGGGCAAT 57.998 42.857 6.32 0.96 41.98 3.56
8024 8624 2.486472 TCCGTAAATTAACCGGGCAA 57.514 45.000 6.32 0.00 41.98 4.52
8025 8625 2.486472 TTCCGTAAATTAACCGGGCA 57.514 45.000 6.32 0.00 41.98 5.36
8026 8626 3.500982 GTTTTCCGTAAATTAACCGGGC 58.499 45.455 6.32 0.00 41.98 6.13
8027 8627 3.505293 TGGTTTTCCGTAAATTAACCGGG 59.495 43.478 6.32 0.00 44.36 5.73
8028 8628 4.379708 CCTGGTTTTCCGTAAATTAACCGG 60.380 45.833 0.00 0.00 44.36 5.28
8029 8629 4.725359 CCTGGTTTTCCGTAAATTAACCG 58.275 43.478 0.00 0.00 44.36 4.44
8030 8630 4.022155 TGCCTGGTTTTCCGTAAATTAACC 60.022 41.667 0.00 0.00 44.36 2.85
8031 8631 5.123805 TGCCTGGTTTTCCGTAAATTAAC 57.876 39.130 0.00 0.00 44.36 2.01
8032 8632 5.786264 TTGCCTGGTTTTCCGTAAATTAA 57.214 34.783 0.00 0.00 44.36 1.40
8033 8633 5.786264 TTTGCCTGGTTTTCCGTAAATTA 57.214 34.783 0.00 0.00 44.36 1.40
8034 8634 4.674281 TTTGCCTGGTTTTCCGTAAATT 57.326 36.364 0.00 0.00 44.36 1.82
8035 8635 4.674281 TTTTGCCTGGTTTTCCGTAAAT 57.326 36.364 0.00 0.00 44.36 1.40
8036 8636 4.467198 TTTTTGCCTGGTTTTCCGTAAA 57.533 36.364 0.00 0.00 44.36 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.