Multiple sequence alignment - TraesCS7A01G524200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G524200 chr7A 100.000 2675 0 0 1 2675 706763416 706766090 0.000000e+00 4940.0
1 TraesCS7A01G524200 chr7A 93.919 444 26 1 2232 2675 495534940 495534498 0.000000e+00 669.0
2 TraesCS7A01G524200 chr3A 97.527 930 22 1 1 930 44250440 44249512 0.000000e+00 1589.0
3 TraesCS7A01G524200 chr3A 93.483 445 28 1 2231 2675 437993321 437992878 0.000000e+00 660.0
4 TraesCS7A01G524200 chr3A 93.483 445 28 1 2231 2675 504853985 504854428 0.000000e+00 660.0
5 TraesCS7A01G524200 chr7D 94.560 1011 31 6 994 1989 614498881 614499882 0.000000e+00 1541.0
6 TraesCS7A01G524200 chr7D 92.500 160 9 2 2071 2230 614500101 614500257 2.680000e-55 226.0
7 TraesCS7A01G524200 chr7D 89.773 88 5 2 1991 2074 614499983 614500070 2.820000e-20 110.0
8 TraesCS7A01G524200 chr5A 91.238 913 67 4 1 913 317503080 317503979 0.000000e+00 1230.0
9 TraesCS7A01G524200 chr5A 84.918 915 115 14 20 932 413023337 413024230 0.000000e+00 904.0
10 TraesCS7A01G524200 chr5A 97.484 318 7 1 618 935 482584401 482584085 2.340000e-150 542.0
11 TraesCS7A01G524200 chr2B 88.602 930 92 6 1 930 789039758 789040673 0.000000e+00 1118.0
12 TraesCS7A01G524200 chr6B 88.627 932 82 12 1 930 63408991 63408082 0.000000e+00 1112.0
13 TraesCS7A01G524200 chr5B 88.482 929 86 12 1 929 60978806 60977899 0.000000e+00 1103.0
14 TraesCS7A01G524200 chr4B 87.124 932 116 3 1 930 649589162 649588233 0.000000e+00 1053.0
15 TraesCS7A01G524200 chr4A 83.888 931 129 13 1 930 429247590 429246680 0.000000e+00 869.0
16 TraesCS7A01G524200 chr4A 93.708 445 27 1 2231 2675 116198874 116198431 0.000000e+00 665.0
17 TraesCS7A01G524200 chr1A 82.599 931 148 12 3 930 181707914 181708833 0.000000e+00 809.0
18 TraesCS7A01G524200 chr2A 93.584 452 27 2 2224 2675 569400107 569400556 0.000000e+00 673.0
19 TraesCS7A01G524200 chr2A 93.722 446 26 2 2231 2675 452177232 452176788 0.000000e+00 667.0
20 TraesCS7A01G524200 chr2A 93.483 445 27 2 2231 2675 593323290 593323732 0.000000e+00 660.0
21 TraesCS7A01G524200 chr2A 77.778 711 112 22 1007 1679 764686156 764685454 1.930000e-106 396.0
22 TraesCS7A01G524200 chr7B 85.119 672 79 6 1025 1675 706797545 706798216 0.000000e+00 667.0
23 TraesCS7A01G524200 chr6A 93.126 451 28 3 2227 2675 48256866 48256417 0.000000e+00 658.0
24 TraesCS7A01G524200 chr6A 93.274 446 28 2 2231 2675 105223669 105223225 0.000000e+00 656.0
25 TraesCS7A01G524200 chrUn 85.680 412 59 0 1264 1675 261261904 261261493 4.090000e-118 435.0
26 TraesCS7A01G524200 chrUn 86.010 193 27 0 1483 1675 473032322 473032130 9.710000e-50 207.0
27 TraesCS7A01G524200 chrUn 77.119 236 47 3 1001 1235 261262197 261261968 2.160000e-26 130.0
28 TraesCS7A01G524200 chr4D 90.909 44 3 1 893 935 47591587 47591630 1.030000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G524200 chr7A 706763416 706766090 2674 False 4940.000000 4940 100.000000 1 2675 1 chr7A.!!$F1 2674
1 TraesCS7A01G524200 chr3A 44249512 44250440 928 True 1589.000000 1589 97.527000 1 930 1 chr3A.!!$R1 929
2 TraesCS7A01G524200 chr7D 614498881 614500257 1376 False 625.666667 1541 92.277667 994 2230 3 chr7D.!!$F1 1236
3 TraesCS7A01G524200 chr5A 317503080 317503979 899 False 1230.000000 1230 91.238000 1 913 1 chr5A.!!$F1 912
4 TraesCS7A01G524200 chr5A 413023337 413024230 893 False 904.000000 904 84.918000 20 932 1 chr5A.!!$F2 912
5 TraesCS7A01G524200 chr2B 789039758 789040673 915 False 1118.000000 1118 88.602000 1 930 1 chr2B.!!$F1 929
6 TraesCS7A01G524200 chr6B 63408082 63408991 909 True 1112.000000 1112 88.627000 1 930 1 chr6B.!!$R1 929
7 TraesCS7A01G524200 chr5B 60977899 60978806 907 True 1103.000000 1103 88.482000 1 929 1 chr5B.!!$R1 928
8 TraesCS7A01G524200 chr4B 649588233 649589162 929 True 1053.000000 1053 87.124000 1 930 1 chr4B.!!$R1 929
9 TraesCS7A01G524200 chr4A 429246680 429247590 910 True 869.000000 869 83.888000 1 930 1 chr4A.!!$R2 929
10 TraesCS7A01G524200 chr1A 181707914 181708833 919 False 809.000000 809 82.599000 3 930 1 chr1A.!!$F1 927
11 TraesCS7A01G524200 chr2A 764685454 764686156 702 True 396.000000 396 77.778000 1007 1679 1 chr2A.!!$R2 672
12 TraesCS7A01G524200 chr7B 706797545 706798216 671 False 667.000000 667 85.119000 1025 1675 1 chr7B.!!$F1 650
13 TraesCS7A01G524200 chrUn 261261493 261262197 704 True 282.500000 435 81.399500 1001 1675 2 chrUn.!!$R2 674

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 837 0.550914 TTGCTCCACCTTGGTTCAGT 59.449 50.0 0.0 0.0 39.03 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2585 2810 0.033366 CCACACGACACCACTGATGA 59.967 55.0 0.0 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.907704 TGCTCCGGCCCTTTTCTCTA 60.908 55.000 0.00 0.00 37.74 2.43
486 488 2.901839 AGCACCTTTGGAGCATTTTCAT 59.098 40.909 8.56 0.00 41.64 2.57
781 797 6.512091 GCGGTTACTTGTACTTTGTTTCATCA 60.512 38.462 0.00 0.00 0.00 3.07
798 814 9.347240 TGTTTCATCATCTTCTTCTTCTCTTTT 57.653 29.630 0.00 0.00 0.00 2.27
802 818 7.664731 TCATCATCTTCTTCTTCTCTTTTGCTT 59.335 33.333 0.00 0.00 0.00 3.91
821 837 0.550914 TTGCTCCACCTTGGTTCAGT 59.449 50.000 0.00 0.00 39.03 3.41
934 965 3.978876 GCCTAAGGCCCTTCAAGAA 57.021 52.632 0.00 0.00 44.06 2.52
935 966 2.443958 GCCTAAGGCCCTTCAAGAAT 57.556 50.000 0.00 0.00 44.06 2.40
936 967 3.577805 GCCTAAGGCCCTTCAAGAATA 57.422 47.619 0.00 0.00 44.06 1.75
937 968 3.481453 GCCTAAGGCCCTTCAAGAATAG 58.519 50.000 0.00 0.00 44.06 1.73
938 969 3.481453 CCTAAGGCCCTTCAAGAATAGC 58.519 50.000 0.00 0.00 0.00 2.97
939 970 2.044123 AAGGCCCTTCAAGAATAGCG 57.956 50.000 0.00 0.00 0.00 4.26
940 971 1.204146 AGGCCCTTCAAGAATAGCGA 58.796 50.000 0.00 0.00 0.00 4.93
941 972 1.771255 AGGCCCTTCAAGAATAGCGAT 59.229 47.619 0.00 0.00 0.00 4.58
942 973 2.972713 AGGCCCTTCAAGAATAGCGATA 59.027 45.455 0.00 0.00 0.00 2.92
943 974 3.067833 GGCCCTTCAAGAATAGCGATAC 58.932 50.000 0.00 0.00 0.00 2.24
944 975 3.067833 GCCCTTCAAGAATAGCGATACC 58.932 50.000 0.00 0.00 0.00 2.73
945 976 3.665190 CCCTTCAAGAATAGCGATACCC 58.335 50.000 0.00 0.00 0.00 3.69
946 977 3.557264 CCCTTCAAGAATAGCGATACCCC 60.557 52.174 0.00 0.00 0.00 4.95
947 978 3.557264 CCTTCAAGAATAGCGATACCCCC 60.557 52.174 0.00 0.00 0.00 5.40
948 979 2.972348 TCAAGAATAGCGATACCCCCT 58.028 47.619 0.00 0.00 0.00 4.79
949 980 3.314693 TCAAGAATAGCGATACCCCCTT 58.685 45.455 0.00 0.00 0.00 3.95
950 981 3.714798 TCAAGAATAGCGATACCCCCTTT 59.285 43.478 0.00 0.00 0.00 3.11
951 982 4.165372 TCAAGAATAGCGATACCCCCTTTT 59.835 41.667 0.00 0.00 0.00 2.27
952 983 4.086706 AGAATAGCGATACCCCCTTTTG 57.913 45.455 0.00 0.00 0.00 2.44
953 984 3.458487 AGAATAGCGATACCCCCTTTTGT 59.542 43.478 0.00 0.00 0.00 2.83
954 985 3.945640 ATAGCGATACCCCCTTTTGTT 57.054 42.857 0.00 0.00 0.00 2.83
955 986 1.834188 AGCGATACCCCCTTTTGTTG 58.166 50.000 0.00 0.00 0.00 3.33
956 987 0.815095 GCGATACCCCCTTTTGTTGG 59.185 55.000 0.00 0.00 0.00 3.77
957 988 1.470051 CGATACCCCCTTTTGTTGGG 58.530 55.000 0.00 0.00 45.34 4.12
984 1015 3.825143 AAAAAGGCTTGCTGATTGTGT 57.175 38.095 0.00 0.00 0.00 3.72
985 1016 2.806608 AAAGGCTTGCTGATTGTGTG 57.193 45.000 0.00 0.00 0.00 3.82
986 1017 1.696063 AAGGCTTGCTGATTGTGTGT 58.304 45.000 0.00 0.00 0.00 3.72
987 1018 2.566833 AGGCTTGCTGATTGTGTGTA 57.433 45.000 0.00 0.00 0.00 2.90
988 1019 2.430465 AGGCTTGCTGATTGTGTGTAG 58.570 47.619 0.00 0.00 0.00 2.74
989 1020 1.135575 GGCTTGCTGATTGTGTGTAGC 60.136 52.381 0.00 0.00 36.72 3.58
990 1021 1.808945 GCTTGCTGATTGTGTGTAGCT 59.191 47.619 0.00 0.00 37.10 3.32
991 1022 3.002791 GCTTGCTGATTGTGTGTAGCTA 58.997 45.455 0.00 0.00 37.10 3.32
992 1023 3.063180 GCTTGCTGATTGTGTGTAGCTAG 59.937 47.826 0.00 0.00 40.38 3.42
1151 1182 1.576920 CACTCGTCGTCTCAGCAGT 59.423 57.895 0.00 0.00 0.00 4.40
1460 1536 2.795973 CCCGTATGTGCTCGACGA 59.204 61.111 12.84 0.00 38.88 4.20
1675 1763 4.500716 GGCCCAAGAAAATCGTCTTTTGAA 60.501 41.667 0.00 0.00 35.63 2.69
1846 1934 4.393371 GTCAGGACTAAGAACTGATTTGCC 59.607 45.833 0.00 0.00 42.54 4.52
1855 1943 1.873698 ACTGATTTGCCGTTGTACGT 58.126 45.000 0.00 0.00 40.58 3.57
1866 1954 6.618287 TGCCGTTGTACGTATATACTACTT 57.382 37.500 11.05 0.00 40.58 2.24
1867 1955 7.722795 TGCCGTTGTACGTATATACTACTTA 57.277 36.000 11.05 3.73 40.58 2.24
1868 1956 7.572759 TGCCGTTGTACGTATATACTACTTAC 58.427 38.462 11.05 11.75 40.58 2.34
1869 1957 7.225734 TGCCGTTGTACGTATATACTACTTACA 59.774 37.037 11.05 9.44 40.58 2.41
1902 1990 6.218019 TCGGGTATATAAGTTGCATGTACAC 58.782 40.000 0.00 0.00 0.00 2.90
1903 1991 5.986741 CGGGTATATAAGTTGCATGTACACA 59.013 40.000 0.00 0.00 0.00 3.72
1984 2072 3.375922 CAGATGCTCACAACATGCACATA 59.624 43.478 0.00 0.00 39.63 2.29
1989 2077 3.058016 GCTCACAACATGCACATACACTT 60.058 43.478 0.00 0.00 0.00 3.16
2012 2199 0.247736 AGAACGTCTCCATCCACTGC 59.752 55.000 0.00 0.00 0.00 4.40
2018 2205 2.744166 CGTCTCCATCCACTGCATGAAT 60.744 50.000 0.00 0.00 0.00 2.57
2019 2206 2.617308 GTCTCCATCCACTGCATGAATG 59.383 50.000 0.00 0.00 0.00 2.67
2023 2210 2.956333 CCATCCACTGCATGAATGTCAT 59.044 45.455 0.00 0.00 37.65 3.06
2041 2232 9.787532 GAATGTCATCGAAAAGAAATAAATCCA 57.212 29.630 0.00 0.00 0.00 3.41
2080 2305 2.164422 GTGCCAAATTTAGGAGCCTGAC 59.836 50.000 9.90 0.00 0.00 3.51
2082 2307 2.883888 GCCAAATTTAGGAGCCTGACCA 60.884 50.000 9.90 0.00 0.00 4.02
2083 2308 3.635591 CCAAATTTAGGAGCCTGACCAT 58.364 45.455 0.00 0.00 0.00 3.55
2084 2309 4.792068 CCAAATTTAGGAGCCTGACCATA 58.208 43.478 0.00 0.00 0.00 2.74
2085 2310 5.388654 CCAAATTTAGGAGCCTGACCATAT 58.611 41.667 0.00 0.00 0.00 1.78
2086 2311 5.242393 CCAAATTTAGGAGCCTGACCATATG 59.758 44.000 0.00 0.00 0.00 1.78
2087 2312 5.912149 AATTTAGGAGCCTGACCATATGA 57.088 39.130 3.65 0.00 0.00 2.15
2091 2316 2.158249 AGGAGCCTGACCATATGAGCTA 60.158 50.000 3.65 0.00 0.00 3.32
2101 2326 4.212716 ACCATATGAGCTAGGACGTGTTA 58.787 43.478 3.65 0.00 0.00 2.41
2127 2352 8.408601 AGCATGTTAGAAATAGTTTAATGCAGG 58.591 33.333 6.58 0.00 40.18 4.85
2140 2365 8.863872 AGTTTAATGCAGGTCACTTATTTAGT 57.136 30.769 0.00 0.00 37.68 2.24
2232 2457 9.911788 AGATCTTGTTTCCATCTAATTATGTGT 57.088 29.630 0.00 0.00 0.00 3.72
2233 2458 9.941664 GATCTTGTTTCCATCTAATTATGTGTG 57.058 33.333 0.00 0.00 0.00 3.82
2234 2459 9.685276 ATCTTGTTTCCATCTAATTATGTGTGA 57.315 29.630 0.00 0.00 0.00 3.58
2235 2460 8.946085 TCTTGTTTCCATCTAATTATGTGTGAC 58.054 33.333 0.00 0.00 0.00 3.67
2236 2461 7.302350 TGTTTCCATCTAATTATGTGTGACG 57.698 36.000 0.00 0.00 0.00 4.35
2237 2462 5.984233 TTCCATCTAATTATGTGTGACGC 57.016 39.130 0.00 0.00 0.00 5.19
2238 2463 4.377021 TCCATCTAATTATGTGTGACGCC 58.623 43.478 0.00 0.00 0.00 5.68
2239 2464 3.498397 CCATCTAATTATGTGTGACGCCC 59.502 47.826 0.00 0.00 0.00 6.13
2240 2465 4.380531 CATCTAATTATGTGTGACGCCCT 58.619 43.478 0.00 0.00 0.00 5.19
2241 2466 4.054780 TCTAATTATGTGTGACGCCCTC 57.945 45.455 0.00 0.00 0.00 4.30
2242 2467 1.651987 AATTATGTGTGACGCCCTCG 58.348 50.000 0.00 0.00 42.43 4.63
2243 2468 0.821517 ATTATGTGTGACGCCCTCGA 59.178 50.000 0.00 0.00 39.41 4.04
2244 2469 0.821517 TTATGTGTGACGCCCTCGAT 59.178 50.000 0.00 0.00 39.41 3.59
2245 2470 0.821517 TATGTGTGACGCCCTCGATT 59.178 50.000 0.00 0.00 39.41 3.34
2246 2471 0.460284 ATGTGTGACGCCCTCGATTC 60.460 55.000 0.00 0.00 39.41 2.52
2247 2472 1.080093 GTGTGACGCCCTCGATTCA 60.080 57.895 0.00 0.00 39.41 2.57
2248 2473 0.669318 GTGTGACGCCCTCGATTCAA 60.669 55.000 0.00 0.00 39.41 2.69
2249 2474 0.249120 TGTGACGCCCTCGATTCAAT 59.751 50.000 0.00 0.00 39.41 2.57
2250 2475 0.931005 GTGACGCCCTCGATTCAATC 59.069 55.000 0.00 0.00 39.41 2.67
2269 2494 8.891367 TTCAATCGTAGACTAATCATATACGC 57.109 34.615 0.00 0.00 42.51 4.42
2270 2495 8.036273 TCAATCGTAGACTAATCATATACGCA 57.964 34.615 0.00 0.00 42.51 5.24
2271 2496 8.508875 TCAATCGTAGACTAATCATATACGCAA 58.491 33.333 0.00 0.00 42.51 4.85
2272 2497 9.124807 CAATCGTAGACTAATCATATACGCAAA 57.875 33.333 0.00 0.00 42.51 3.68
2273 2498 9.856488 AATCGTAGACTAATCATATACGCAAAT 57.144 29.630 0.00 0.00 42.51 2.32
2274 2499 8.669394 TCGTAGACTAATCATATACGCAAATG 57.331 34.615 0.00 0.00 39.16 2.32
2275 2500 8.294577 TCGTAGACTAATCATATACGCAAATGT 58.705 33.333 0.00 0.00 39.16 2.71
2276 2501 8.365938 CGTAGACTAATCATATACGCAAATGTG 58.634 37.037 0.00 0.00 33.69 3.21
2277 2502 9.193133 GTAGACTAATCATATACGCAAATGTGT 57.807 33.333 4.86 4.86 42.11 3.72
2279 2504 9.193133 AGACTAATCATATACGCAAATGTGTAC 57.807 33.333 8.84 0.00 42.88 2.90
2280 2505 8.003508 ACTAATCATATACGCAAATGTGTACG 57.996 34.615 8.84 2.28 42.88 3.67
2281 2506 7.863877 ACTAATCATATACGCAAATGTGTACGA 59.136 33.333 8.84 6.98 42.88 3.43
2282 2507 7.652300 AATCATATACGCAAATGTGTACGAT 57.348 32.000 8.84 8.66 42.88 3.73
2283 2508 6.684609 TCATATACGCAAATGTGTACGATC 57.315 37.500 8.84 0.00 42.88 3.69
2284 2509 6.210078 TCATATACGCAAATGTGTACGATCA 58.790 36.000 8.84 0.00 42.88 2.92
2285 2510 6.697892 TCATATACGCAAATGTGTACGATCAA 59.302 34.615 8.84 0.00 42.88 2.57
2286 2511 3.722555 ACGCAAATGTGTACGATCAAG 57.277 42.857 0.00 0.00 36.94 3.02
2287 2512 3.322369 ACGCAAATGTGTACGATCAAGA 58.678 40.909 0.00 0.00 36.94 3.02
2288 2513 3.932710 ACGCAAATGTGTACGATCAAGAT 59.067 39.130 0.00 0.00 36.94 2.40
2289 2514 4.032900 ACGCAAATGTGTACGATCAAGATC 59.967 41.667 0.00 0.00 36.94 2.75
2290 2515 4.032786 CGCAAATGTGTACGATCAAGATCA 59.967 41.667 10.39 0.00 37.69 2.92
2291 2516 5.445806 CGCAAATGTGTACGATCAAGATCAA 60.446 40.000 10.39 0.00 37.69 2.57
2292 2517 5.961843 GCAAATGTGTACGATCAAGATCAAG 59.038 40.000 10.39 0.00 37.69 3.02
2293 2518 6.481134 CAAATGTGTACGATCAAGATCAAGG 58.519 40.000 10.39 0.00 37.69 3.61
2294 2519 5.598416 ATGTGTACGATCAAGATCAAGGA 57.402 39.130 10.39 0.00 37.69 3.36
2295 2520 4.744570 TGTGTACGATCAAGATCAAGGAC 58.255 43.478 10.39 2.84 37.69 3.85
2296 2521 4.462834 TGTGTACGATCAAGATCAAGGACT 59.537 41.667 10.39 0.00 37.69 3.85
2297 2522 5.038033 GTGTACGATCAAGATCAAGGACTC 58.962 45.833 10.39 0.26 37.69 3.36
2298 2523 4.705023 TGTACGATCAAGATCAAGGACTCA 59.295 41.667 10.39 0.00 37.69 3.41
2299 2524 4.116747 ACGATCAAGATCAAGGACTCAC 57.883 45.455 10.39 0.00 37.69 3.51
2300 2525 3.111838 CGATCAAGATCAAGGACTCACG 58.888 50.000 10.39 0.00 37.69 4.35
2301 2526 3.452474 GATCAAGATCAAGGACTCACGG 58.548 50.000 5.22 0.00 37.74 4.94
2302 2527 2.525368 TCAAGATCAAGGACTCACGGA 58.475 47.619 0.00 0.00 0.00 4.69
2303 2528 2.897326 TCAAGATCAAGGACTCACGGAA 59.103 45.455 0.00 0.00 0.00 4.30
2304 2529 3.323691 TCAAGATCAAGGACTCACGGAAA 59.676 43.478 0.00 0.00 0.00 3.13
2305 2530 3.601443 AGATCAAGGACTCACGGAAAG 57.399 47.619 0.00 0.00 0.00 2.62
2306 2531 3.165875 AGATCAAGGACTCACGGAAAGA 58.834 45.455 0.00 0.00 0.00 2.52
2307 2532 3.772025 AGATCAAGGACTCACGGAAAGAT 59.228 43.478 0.00 0.00 0.00 2.40
2308 2533 4.956700 AGATCAAGGACTCACGGAAAGATA 59.043 41.667 0.00 0.00 0.00 1.98
2309 2534 5.600484 AGATCAAGGACTCACGGAAAGATAT 59.400 40.000 0.00 0.00 0.00 1.63
2310 2535 5.263968 TCAAGGACTCACGGAAAGATATC 57.736 43.478 0.00 0.00 0.00 1.63
2311 2536 4.709886 TCAAGGACTCACGGAAAGATATCA 59.290 41.667 5.32 0.00 0.00 2.15
2312 2537 4.657436 AGGACTCACGGAAAGATATCAC 57.343 45.455 5.32 0.00 0.00 3.06
2313 2538 4.023980 AGGACTCACGGAAAGATATCACA 58.976 43.478 5.32 0.00 0.00 3.58
2314 2539 4.466370 AGGACTCACGGAAAGATATCACAA 59.534 41.667 5.32 0.00 0.00 3.33
2315 2540 4.567159 GGACTCACGGAAAGATATCACAAC 59.433 45.833 5.32 0.00 0.00 3.32
2316 2541 5.147330 ACTCACGGAAAGATATCACAACA 57.853 39.130 5.32 0.00 0.00 3.33
2317 2542 4.929808 ACTCACGGAAAGATATCACAACAC 59.070 41.667 5.32 0.00 0.00 3.32
2318 2543 4.888917 TCACGGAAAGATATCACAACACA 58.111 39.130 5.32 0.00 0.00 3.72
2319 2544 4.688879 TCACGGAAAGATATCACAACACAC 59.311 41.667 5.32 0.00 0.00 3.82
2320 2545 4.000988 ACGGAAAGATATCACAACACACC 58.999 43.478 5.32 0.00 0.00 4.16
2321 2546 4.253685 CGGAAAGATATCACAACACACCT 58.746 43.478 5.32 0.00 0.00 4.00
2322 2547 4.093408 CGGAAAGATATCACAACACACCTG 59.907 45.833 5.32 0.00 0.00 4.00
2323 2548 5.003804 GGAAAGATATCACAACACACCTGT 58.996 41.667 5.32 0.00 0.00 4.00
2324 2549 6.170506 GGAAAGATATCACAACACACCTGTA 58.829 40.000 5.32 0.00 0.00 2.74
2325 2550 6.313905 GGAAAGATATCACAACACACCTGTAG 59.686 42.308 5.32 0.00 0.00 2.74
2326 2551 6.605471 AAGATATCACAACACACCTGTAGA 57.395 37.500 5.32 0.00 0.00 2.59
2327 2552 5.967088 AGATATCACAACACACCTGTAGAC 58.033 41.667 5.32 0.00 0.00 2.59
2328 2553 5.480422 AGATATCACAACACACCTGTAGACA 59.520 40.000 5.32 0.00 0.00 3.41
2329 2554 3.173668 TCACAACACACCTGTAGACAC 57.826 47.619 0.00 0.00 0.00 3.67
2330 2555 2.498078 TCACAACACACCTGTAGACACA 59.502 45.455 0.00 0.00 0.00 3.72
2331 2556 3.055747 TCACAACACACCTGTAGACACAA 60.056 43.478 0.00 0.00 33.22 3.33
2332 2557 3.687212 CACAACACACCTGTAGACACAAA 59.313 43.478 0.00 0.00 33.22 2.83
2333 2558 4.335315 CACAACACACCTGTAGACACAAAT 59.665 41.667 0.00 0.00 33.22 2.32
2334 2559 4.947388 ACAACACACCTGTAGACACAAATT 59.053 37.500 0.00 0.00 33.22 1.82
2335 2560 5.163663 ACAACACACCTGTAGACACAAATTG 60.164 40.000 0.00 0.00 33.22 2.32
2336 2561 4.776349 ACACACCTGTAGACACAAATTGA 58.224 39.130 0.00 0.00 33.22 2.57
2337 2562 5.189928 ACACACCTGTAGACACAAATTGAA 58.810 37.500 0.00 0.00 33.22 2.69
2338 2563 5.650266 ACACACCTGTAGACACAAATTGAAA 59.350 36.000 0.00 0.00 33.22 2.69
2339 2564 6.151985 ACACACCTGTAGACACAAATTGAAAA 59.848 34.615 0.00 0.00 33.22 2.29
2340 2565 7.147915 ACACACCTGTAGACACAAATTGAAAAT 60.148 33.333 0.00 0.00 33.22 1.82
2341 2566 8.349245 CACACCTGTAGACACAAATTGAAAATA 58.651 33.333 0.00 0.00 33.22 1.40
2342 2567 8.908903 ACACCTGTAGACACAAATTGAAAATAA 58.091 29.630 0.00 0.00 33.22 1.40
2343 2568 9.912634 CACCTGTAGACACAAATTGAAAATAAT 57.087 29.630 0.00 0.00 33.22 1.28
2368 2593 9.720769 ATACAATCTTTATATTACAAGACGGGG 57.279 33.333 0.00 0.00 31.80 5.73
2369 2594 7.798071 ACAATCTTTATATTACAAGACGGGGA 58.202 34.615 0.00 0.00 31.80 4.81
2370 2595 7.713942 ACAATCTTTATATTACAAGACGGGGAC 59.286 37.037 0.00 0.00 31.80 4.46
2371 2596 6.766429 ATCTTTATATTACAAGACGGGGACC 58.234 40.000 0.00 0.00 36.54 4.46
2372 2597 6.557633 ATCTTTATATTACAAGACGGGGACCT 59.442 38.462 0.00 0.00 37.41 3.85
2373 2598 7.256225 ATCTTTATATTACAAGACGGGGACCTC 60.256 40.741 0.00 0.00 37.41 3.85
2392 2617 3.263602 TCGACGGCTCGAATACATAAG 57.736 47.619 6.59 0.00 46.04 1.73
2393 2618 1.714460 CGACGGCTCGAATACATAAGC 59.286 52.381 1.50 0.00 43.06 3.09
2394 2619 2.604855 CGACGGCTCGAATACATAAGCT 60.605 50.000 1.50 0.00 43.06 3.74
2395 2620 2.981140 GACGGCTCGAATACATAAGCTC 59.019 50.000 1.50 0.00 35.12 4.09
2396 2621 1.979469 CGGCTCGAATACATAAGCTCG 59.021 52.381 0.00 0.00 35.12 5.03
2397 2622 2.350484 CGGCTCGAATACATAAGCTCGA 60.350 50.000 0.00 0.00 37.95 4.04
2398 2623 3.639538 GGCTCGAATACATAAGCTCGAA 58.360 45.455 0.00 0.00 39.60 3.71
2399 2624 4.238514 GGCTCGAATACATAAGCTCGAAT 58.761 43.478 0.00 0.00 39.60 3.34
2400 2625 5.399858 GGCTCGAATACATAAGCTCGAATA 58.600 41.667 0.00 0.00 39.60 1.75
2401 2626 5.286558 GGCTCGAATACATAAGCTCGAATAC 59.713 44.000 0.00 0.00 39.60 1.89
2402 2627 5.856986 GCTCGAATACATAAGCTCGAATACA 59.143 40.000 0.00 0.00 39.60 2.29
2403 2628 6.183359 GCTCGAATACATAAGCTCGAATACAC 60.183 42.308 0.00 0.00 39.60 2.90
2404 2629 6.731164 TCGAATACATAAGCTCGAATACACA 58.269 36.000 0.00 0.00 37.38 3.72
2405 2630 7.197703 TCGAATACATAAGCTCGAATACACAA 58.802 34.615 0.00 0.00 37.38 3.33
2406 2631 7.378728 TCGAATACATAAGCTCGAATACACAAG 59.621 37.037 0.00 0.00 37.38 3.16
2407 2632 7.378728 CGAATACATAAGCTCGAATACACAAGA 59.621 37.037 0.00 0.00 33.13 3.02
2408 2633 8.581057 AATACATAAGCTCGAATACACAAGAG 57.419 34.615 0.00 0.00 0.00 2.85
2409 2634 5.967088 ACATAAGCTCGAATACACAAGAGT 58.033 37.500 0.00 0.00 33.57 3.24
2410 2635 6.037098 ACATAAGCTCGAATACACAAGAGTC 58.963 40.000 0.00 0.00 33.57 3.36
2411 2636 4.521130 AAGCTCGAATACACAAGAGTCA 57.479 40.909 0.00 0.00 33.57 3.41
2412 2637 4.103365 AGCTCGAATACACAAGAGTCAG 57.897 45.455 0.00 0.00 33.57 3.51
2413 2638 2.600867 GCTCGAATACACAAGAGTCAGC 59.399 50.000 0.00 0.00 33.57 4.26
2414 2639 2.848887 CTCGAATACACAAGAGTCAGCG 59.151 50.000 0.00 0.00 0.00 5.18
2415 2640 1.920574 CGAATACACAAGAGTCAGCGG 59.079 52.381 0.00 0.00 0.00 5.52
2416 2641 2.415491 CGAATACACAAGAGTCAGCGGA 60.415 50.000 0.00 0.00 0.00 5.54
2417 2642 3.585862 GAATACACAAGAGTCAGCGGAA 58.414 45.455 0.00 0.00 0.00 4.30
2418 2643 2.724977 TACACAAGAGTCAGCGGAAG 57.275 50.000 0.00 0.00 0.00 3.46
2439 2664 9.077674 CGGAAGCAACAATATCTGAGTATATAC 57.922 37.037 4.60 4.60 0.00 1.47
2440 2665 9.929180 GGAAGCAACAATATCTGAGTATATACA 57.071 33.333 15.18 0.00 0.00 2.29
2480 2705 5.705609 CCTTAAGAAGGCTAGCACAAAAA 57.294 39.130 18.24 2.46 42.78 1.94
2481 2706 5.461526 CCTTAAGAAGGCTAGCACAAAAAC 58.538 41.667 18.24 0.00 42.78 2.43
2482 2707 5.009610 CCTTAAGAAGGCTAGCACAAAAACA 59.990 40.000 18.24 0.00 42.78 2.83
2483 2708 6.458232 TTAAGAAGGCTAGCACAAAAACAA 57.542 33.333 18.24 0.00 0.00 2.83
2484 2709 5.535753 AAGAAGGCTAGCACAAAAACAAT 57.464 34.783 18.24 0.00 0.00 2.71
2485 2710 6.648879 AAGAAGGCTAGCACAAAAACAATA 57.351 33.333 18.24 0.00 0.00 1.90
2486 2711 6.840780 AGAAGGCTAGCACAAAAACAATAT 57.159 33.333 18.24 0.00 0.00 1.28
2487 2712 7.232118 AGAAGGCTAGCACAAAAACAATATT 57.768 32.000 18.24 0.00 0.00 1.28
2488 2713 7.092716 AGAAGGCTAGCACAAAAACAATATTG 58.907 34.615 18.24 14.01 0.00 1.90
2489 2714 6.588719 AGGCTAGCACAAAAACAATATTGA 57.411 33.333 22.16 0.00 0.00 2.57
2490 2715 7.174107 AGGCTAGCACAAAAACAATATTGAT 57.826 32.000 22.16 7.48 0.00 2.57
2491 2716 7.260603 AGGCTAGCACAAAAACAATATTGATC 58.739 34.615 22.16 0.00 0.00 2.92
2492 2717 6.197096 GGCTAGCACAAAAACAATATTGATCG 59.803 38.462 22.16 7.78 0.00 3.69
2493 2718 6.966632 GCTAGCACAAAAACAATATTGATCGA 59.033 34.615 22.16 0.00 0.00 3.59
2494 2719 7.164826 GCTAGCACAAAAACAATATTGATCGAG 59.835 37.037 22.16 10.59 0.00 4.04
2495 2720 7.144722 AGCACAAAAACAATATTGATCGAGA 57.855 32.000 22.16 0.00 0.00 4.04
2496 2721 7.592938 AGCACAAAAACAATATTGATCGAGAA 58.407 30.769 22.16 0.00 0.00 2.87
2497 2722 7.752239 AGCACAAAAACAATATTGATCGAGAAG 59.248 33.333 22.16 6.58 0.00 2.85
2498 2723 7.008628 GCACAAAAACAATATTGATCGAGAAGG 59.991 37.037 22.16 5.00 0.00 3.46
2499 2724 7.008628 CACAAAAACAATATTGATCGAGAAGGC 59.991 37.037 22.16 0.00 0.00 4.35
2500 2725 6.757897 AAAACAATATTGATCGAGAAGGCA 57.242 33.333 22.16 0.00 0.00 4.75
2501 2726 6.757897 AAACAATATTGATCGAGAAGGCAA 57.242 33.333 22.16 0.00 0.00 4.52
2502 2727 5.998454 ACAATATTGATCGAGAAGGCAAG 57.002 39.130 22.16 0.00 0.00 4.01
2503 2728 4.818546 ACAATATTGATCGAGAAGGCAAGG 59.181 41.667 22.16 0.00 0.00 3.61
2504 2729 1.673168 ATTGATCGAGAAGGCAAGGC 58.327 50.000 0.00 0.00 0.00 4.35
2522 2747 3.478274 CTCCTGCCTGGGAGCCTC 61.478 72.222 10.08 0.00 45.07 4.70
2525 2750 2.041508 CTGCCTGGGAGCCTCCTA 60.042 66.667 11.29 3.10 36.57 2.94
2526 2751 1.690633 CTGCCTGGGAGCCTCCTAA 60.691 63.158 11.29 0.00 36.57 2.69
2527 2752 1.977293 CTGCCTGGGAGCCTCCTAAC 61.977 65.000 11.29 0.06 36.57 2.34
2528 2753 1.690985 GCCTGGGAGCCTCCTAACT 60.691 63.158 11.29 0.00 36.57 2.24
2529 2754 0.398664 GCCTGGGAGCCTCCTAACTA 60.399 60.000 11.29 0.00 36.57 2.24
2530 2755 1.415200 CCTGGGAGCCTCCTAACTAC 58.585 60.000 11.29 0.00 36.57 2.73
2531 2756 1.062810 CCTGGGAGCCTCCTAACTACT 60.063 57.143 11.29 0.00 36.57 2.57
2532 2757 2.312390 CTGGGAGCCTCCTAACTACTC 58.688 57.143 11.29 0.00 36.57 2.59
2533 2758 1.063114 TGGGAGCCTCCTAACTACTCC 60.063 57.143 11.29 0.00 45.10 3.85
2534 2759 2.456073 GGAGCCTCCTAACTACTCCA 57.544 55.000 2.64 0.00 45.16 3.86
2535 2760 2.748388 GGAGCCTCCTAACTACTCCAA 58.252 52.381 2.64 0.00 45.16 3.53
2536 2761 2.696187 GGAGCCTCCTAACTACTCCAAG 59.304 54.545 2.64 0.00 45.16 3.61
2537 2762 3.367321 GAGCCTCCTAACTACTCCAAGT 58.633 50.000 0.00 0.00 0.00 3.16
2538 2763 3.367321 AGCCTCCTAACTACTCCAAGTC 58.633 50.000 0.00 0.00 0.00 3.01
2539 2764 2.099427 GCCTCCTAACTACTCCAAGTCG 59.901 54.545 0.00 0.00 0.00 4.18
2540 2765 3.354467 CCTCCTAACTACTCCAAGTCGT 58.646 50.000 0.00 0.00 0.00 4.34
2541 2766 3.377798 CCTCCTAACTACTCCAAGTCGTC 59.622 52.174 0.00 0.00 0.00 4.20
2542 2767 4.008330 CTCCTAACTACTCCAAGTCGTCA 58.992 47.826 0.00 0.00 0.00 4.35
2543 2768 4.008330 TCCTAACTACTCCAAGTCGTCAG 58.992 47.826 0.00 0.00 0.00 3.51
2544 2769 2.726832 AACTACTCCAAGTCGTCAGC 57.273 50.000 0.00 0.00 0.00 4.26
2545 2770 0.522180 ACTACTCCAAGTCGTCAGCG 59.478 55.000 0.00 0.00 39.92 5.18
2546 2771 0.179161 CTACTCCAAGTCGTCAGCGG 60.179 60.000 0.00 0.00 38.89 5.52
2547 2772 0.892358 TACTCCAAGTCGTCAGCGGT 60.892 55.000 0.00 0.00 38.89 5.68
2548 2773 1.444553 CTCCAAGTCGTCAGCGGTC 60.445 63.158 0.00 0.00 38.89 4.79
2549 2774 2.805353 CCAAGTCGTCAGCGGTCG 60.805 66.667 0.00 0.00 38.89 4.79
2550 2775 2.050351 CAAGTCGTCAGCGGTCGT 60.050 61.111 3.41 0.00 38.89 4.34
2551 2776 2.081212 CAAGTCGTCAGCGGTCGTC 61.081 63.158 3.41 0.00 38.89 4.20
2552 2777 2.549198 AAGTCGTCAGCGGTCGTCA 61.549 57.895 3.41 0.00 38.89 4.35
2553 2778 2.728427 AAGTCGTCAGCGGTCGTCAC 62.728 60.000 3.41 0.00 38.89 3.67
2554 2779 4.379143 TCGTCAGCGGTCGTCACG 62.379 66.667 3.41 0.00 38.89 4.35
2555 2780 4.678269 CGTCAGCGGTCGTCACGT 62.678 66.667 0.00 0.00 0.00 4.49
2556 2781 2.557805 GTCAGCGGTCGTCACGTA 59.442 61.111 0.00 0.00 0.00 3.57
2557 2782 1.511464 GTCAGCGGTCGTCACGTAG 60.511 63.158 0.00 0.00 0.00 3.51
2559 2784 0.670239 TCAGCGGTCGTCACGTAGTA 60.670 55.000 0.00 0.00 41.61 1.82
2560 2785 0.247576 CAGCGGTCGTCACGTAGTAG 60.248 60.000 0.00 0.00 41.61 2.57
2561 2786 0.671781 AGCGGTCGTCACGTAGTAGT 60.672 55.000 0.00 0.00 41.61 2.73
2562 2787 0.999406 GCGGTCGTCACGTAGTAGTA 59.001 55.000 0.00 0.00 41.61 1.82
2563 2788 1.005557 GCGGTCGTCACGTAGTAGTAG 60.006 57.143 0.00 0.00 41.61 2.57
2564 2789 1.590238 CGGTCGTCACGTAGTAGTAGG 59.410 57.143 0.00 0.00 41.61 3.18
2565 2790 1.328986 GGTCGTCACGTAGTAGTAGGC 59.671 57.143 0.00 0.00 41.61 3.93
2566 2791 2.002586 GTCGTCACGTAGTAGTAGGCA 58.997 52.381 0.00 0.00 41.61 4.75
2567 2792 2.002586 TCGTCACGTAGTAGTAGGCAC 58.997 52.381 0.00 0.00 41.61 5.01
2568 2793 1.063174 CGTCACGTAGTAGTAGGCACC 59.937 57.143 0.00 0.00 41.61 5.01
2569 2794 1.403323 GTCACGTAGTAGTAGGCACCC 59.597 57.143 0.00 0.00 41.61 4.61
2570 2795 1.283029 TCACGTAGTAGTAGGCACCCT 59.717 52.381 0.00 0.00 41.61 4.34
2571 2796 1.674962 CACGTAGTAGTAGGCACCCTC 59.325 57.143 0.00 0.00 41.61 4.30
2572 2797 0.942962 CGTAGTAGTAGGCACCCTCG 59.057 60.000 0.00 0.00 34.61 4.63
2573 2798 1.316651 GTAGTAGTAGGCACCCTCGG 58.683 60.000 0.00 0.00 34.61 4.63
2574 2799 0.184451 TAGTAGTAGGCACCCTCGGG 59.816 60.000 0.00 0.00 42.03 5.14
2584 2809 3.857764 CCCTCGGGGTAGCAGTAG 58.142 66.667 0.00 0.00 38.25 2.57
2585 2810 1.076192 CCCTCGGGGTAGCAGTAGT 60.076 63.158 0.00 0.00 38.25 2.73
2586 2811 1.108132 CCCTCGGGGTAGCAGTAGTC 61.108 65.000 0.00 0.00 38.25 2.59
2587 2812 0.395311 CCTCGGGGTAGCAGTAGTCA 60.395 60.000 0.00 0.00 0.00 3.41
2588 2813 1.693627 CTCGGGGTAGCAGTAGTCAT 58.306 55.000 0.00 0.00 0.00 3.06
2589 2814 1.609555 CTCGGGGTAGCAGTAGTCATC 59.390 57.143 0.00 0.00 0.00 2.92
2590 2815 1.064240 TCGGGGTAGCAGTAGTCATCA 60.064 52.381 0.00 0.00 0.00 3.07
2591 2816 1.338337 CGGGGTAGCAGTAGTCATCAG 59.662 57.143 0.00 0.00 0.00 2.90
2592 2817 2.389715 GGGGTAGCAGTAGTCATCAGT 58.610 52.381 0.00 0.00 0.00 3.41
2593 2818 2.101582 GGGGTAGCAGTAGTCATCAGTG 59.898 54.545 0.00 0.00 0.00 3.66
2594 2819 2.101582 GGGTAGCAGTAGTCATCAGTGG 59.898 54.545 0.00 0.00 0.00 4.00
2595 2820 2.761208 GGTAGCAGTAGTCATCAGTGGT 59.239 50.000 0.00 0.00 0.00 4.16
2596 2821 3.429547 GGTAGCAGTAGTCATCAGTGGTG 60.430 52.174 0.00 0.00 0.00 4.17
2597 2822 2.251818 AGCAGTAGTCATCAGTGGTGT 58.748 47.619 2.68 0.00 0.00 4.16
2598 2823 2.232452 AGCAGTAGTCATCAGTGGTGTC 59.768 50.000 2.68 0.00 0.00 3.67
2599 2824 2.868662 CAGTAGTCATCAGTGGTGTCG 58.131 52.381 2.68 0.00 0.00 4.35
2600 2825 2.229062 CAGTAGTCATCAGTGGTGTCGT 59.771 50.000 2.68 0.00 0.00 4.34
2601 2826 2.229062 AGTAGTCATCAGTGGTGTCGTG 59.771 50.000 2.68 0.00 0.00 4.35
2602 2827 1.040646 AGTCATCAGTGGTGTCGTGT 58.959 50.000 2.68 0.00 0.00 4.49
2603 2828 1.139989 GTCATCAGTGGTGTCGTGTG 58.860 55.000 2.68 0.00 0.00 3.82
2604 2829 0.033366 TCATCAGTGGTGTCGTGTGG 59.967 55.000 2.68 0.00 0.00 4.17
2605 2830 1.301716 ATCAGTGGTGTCGTGTGGC 60.302 57.895 0.00 0.00 0.00 5.01
2606 2831 1.758440 ATCAGTGGTGTCGTGTGGCT 61.758 55.000 0.00 0.00 0.00 4.75
2607 2832 1.956170 CAGTGGTGTCGTGTGGCTC 60.956 63.158 0.00 0.00 0.00 4.70
2608 2833 2.108157 GTGGTGTCGTGTGGCTCA 59.892 61.111 0.00 0.00 0.00 4.26
2609 2834 1.301716 GTGGTGTCGTGTGGCTCAT 60.302 57.895 0.00 0.00 0.00 2.90
2610 2835 1.301637 TGGTGTCGTGTGGCTCATG 60.302 57.895 2.39 2.39 34.61 3.07
2611 2836 2.034879 GGTGTCGTGTGGCTCATGG 61.035 63.158 8.75 0.00 34.14 3.66
2612 2837 2.034879 GTGTCGTGTGGCTCATGGG 61.035 63.158 8.75 0.00 34.14 4.00
2613 2838 2.213513 TGTCGTGTGGCTCATGGGA 61.214 57.895 0.00 0.00 34.14 4.37
2614 2839 1.221840 GTCGTGTGGCTCATGGGAT 59.778 57.895 0.00 0.00 34.14 3.85
2615 2840 0.811616 GTCGTGTGGCTCATGGGATC 60.812 60.000 0.00 0.00 34.14 3.36
2616 2841 1.524621 CGTGTGGCTCATGGGATCC 60.525 63.158 1.92 1.92 0.00 3.36
2617 2842 1.524621 GTGTGGCTCATGGGATCCG 60.525 63.158 5.45 0.00 31.76 4.18
2618 2843 1.995066 TGTGGCTCATGGGATCCGT 60.995 57.895 5.45 0.00 31.76 4.69
2619 2844 1.227674 GTGGCTCATGGGATCCGTC 60.228 63.158 5.45 0.00 31.76 4.79
2620 2845 1.688884 TGGCTCATGGGATCCGTCA 60.689 57.895 5.45 0.00 31.76 4.35
2621 2846 1.056125 TGGCTCATGGGATCCGTCAT 61.056 55.000 5.45 1.28 31.76 3.06
2622 2847 0.321122 GGCTCATGGGATCCGTCATC 60.321 60.000 5.45 0.00 0.00 2.92
2623 2848 0.683973 GCTCATGGGATCCGTCATCT 59.316 55.000 5.45 0.00 0.00 2.90
2624 2849 1.607509 GCTCATGGGATCCGTCATCTG 60.608 57.143 5.45 1.29 0.00 2.90
2625 2850 1.001746 CTCATGGGATCCGTCATCTGG 59.998 57.143 5.45 0.00 0.00 3.86
2626 2851 0.761187 CATGGGATCCGTCATCTGGT 59.239 55.000 5.45 0.00 0.00 4.00
2627 2852 1.051812 ATGGGATCCGTCATCTGGTC 58.948 55.000 5.45 0.00 0.00 4.02
2628 2853 1.364171 GGGATCCGTCATCTGGTCG 59.636 63.158 5.45 0.00 0.00 4.79
2629 2854 1.300233 GGATCCGTCATCTGGTCGC 60.300 63.158 0.00 0.00 0.00 5.19
2630 2855 1.437573 GATCCGTCATCTGGTCGCA 59.562 57.895 0.00 0.00 0.00 5.10
2631 2856 0.179111 GATCCGTCATCTGGTCGCAA 60.179 55.000 0.00 0.00 0.00 4.85
2632 2857 0.460284 ATCCGTCATCTGGTCGCAAC 60.460 55.000 0.00 0.00 0.00 4.17
2633 2858 1.374125 CCGTCATCTGGTCGCAACA 60.374 57.895 0.00 0.00 0.00 3.33
2634 2859 0.948623 CCGTCATCTGGTCGCAACAA 60.949 55.000 0.00 0.00 0.00 2.83
2635 2860 1.078709 CGTCATCTGGTCGCAACAAT 58.921 50.000 0.00 0.00 0.00 2.71
2636 2861 1.061131 CGTCATCTGGTCGCAACAATC 59.939 52.381 0.00 0.00 0.00 2.67
2637 2862 1.061131 GTCATCTGGTCGCAACAATCG 59.939 52.381 0.00 0.00 0.00 3.34
2638 2863 0.374758 CATCTGGTCGCAACAATCGG 59.625 55.000 0.00 0.00 0.00 4.18
2639 2864 0.744414 ATCTGGTCGCAACAATCGGG 60.744 55.000 0.00 0.00 0.00 5.14
2640 2865 1.671054 CTGGTCGCAACAATCGGGT 60.671 57.895 0.00 0.00 0.00 5.28
2641 2866 0.390603 CTGGTCGCAACAATCGGGTA 60.391 55.000 0.00 0.00 0.00 3.69
2642 2867 0.250793 TGGTCGCAACAATCGGGTAT 59.749 50.000 0.00 0.00 0.00 2.73
2643 2868 0.655733 GGTCGCAACAATCGGGTATG 59.344 55.000 0.00 0.00 0.00 2.39
2644 2869 0.655733 GTCGCAACAATCGGGTATGG 59.344 55.000 0.00 0.00 0.00 2.74
2645 2870 0.462937 TCGCAACAATCGGGTATGGG 60.463 55.000 0.00 0.00 0.00 4.00
2646 2871 1.444119 CGCAACAATCGGGTATGGGG 61.444 60.000 0.00 0.00 0.00 4.96
2647 2872 1.106944 GCAACAATCGGGTATGGGGG 61.107 60.000 0.00 0.00 0.00 5.40
2648 2873 0.548989 CAACAATCGGGTATGGGGGA 59.451 55.000 0.00 0.00 0.00 4.81
2649 2874 1.064314 CAACAATCGGGTATGGGGGAA 60.064 52.381 0.00 0.00 0.00 3.97
2650 2875 1.300927 ACAATCGGGTATGGGGGAAA 58.699 50.000 0.00 0.00 0.00 3.13
2651 2876 1.641714 ACAATCGGGTATGGGGGAAAA 59.358 47.619 0.00 0.00 0.00 2.29
2652 2877 2.306847 CAATCGGGTATGGGGGAAAAG 58.693 52.381 0.00 0.00 0.00 2.27
2653 2878 1.901648 ATCGGGTATGGGGGAAAAGA 58.098 50.000 0.00 0.00 0.00 2.52
2654 2879 1.209621 TCGGGTATGGGGGAAAAGAG 58.790 55.000 0.00 0.00 0.00 2.85
2655 2880 0.182775 CGGGTATGGGGGAAAAGAGG 59.817 60.000 0.00 0.00 0.00 3.69
2656 2881 1.305886 GGGTATGGGGGAAAAGAGGT 58.694 55.000 0.00 0.00 0.00 3.85
2657 2882 2.495227 GGGTATGGGGGAAAAGAGGTA 58.505 52.381 0.00 0.00 0.00 3.08
2658 2883 2.442126 GGGTATGGGGGAAAAGAGGTAG 59.558 54.545 0.00 0.00 0.00 3.18
2659 2884 2.158652 GGTATGGGGGAAAAGAGGTAGC 60.159 54.545 0.00 0.00 0.00 3.58
2660 2885 1.681229 ATGGGGGAAAAGAGGTAGCA 58.319 50.000 0.00 0.00 0.00 3.49
2661 2886 1.451449 TGGGGGAAAAGAGGTAGCAA 58.549 50.000 0.00 0.00 0.00 3.91
2662 2887 1.783979 TGGGGGAAAAGAGGTAGCAAA 59.216 47.619 0.00 0.00 0.00 3.68
2663 2888 2.225017 TGGGGGAAAAGAGGTAGCAAAG 60.225 50.000 0.00 0.00 0.00 2.77
2664 2889 1.819288 GGGGAAAAGAGGTAGCAAAGC 59.181 52.381 0.00 0.00 0.00 3.51
2665 2890 2.514803 GGGAAAAGAGGTAGCAAAGCA 58.485 47.619 0.00 0.00 0.00 3.91
2666 2891 2.489722 GGGAAAAGAGGTAGCAAAGCAG 59.510 50.000 0.00 0.00 0.00 4.24
2667 2892 2.095008 GGAAAAGAGGTAGCAAAGCAGC 60.095 50.000 0.00 0.00 0.00 5.25
2668 2893 1.539157 AAAGAGGTAGCAAAGCAGCC 58.461 50.000 0.00 0.00 34.23 4.85
2669 2894 0.401738 AAGAGGTAGCAAAGCAGCCA 59.598 50.000 0.00 0.00 34.23 4.75
2670 2895 0.622665 AGAGGTAGCAAAGCAGCCAT 59.377 50.000 0.00 0.00 34.23 4.40
2671 2896 0.737219 GAGGTAGCAAAGCAGCCATG 59.263 55.000 0.00 0.00 34.23 3.66
2672 2897 0.329261 AGGTAGCAAAGCAGCCATGA 59.671 50.000 0.00 0.00 34.23 3.07
2673 2898 0.737219 GGTAGCAAAGCAGCCATGAG 59.263 55.000 0.00 0.00 34.23 2.90
2674 2899 1.457346 GTAGCAAAGCAGCCATGAGT 58.543 50.000 0.00 0.00 34.23 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.296715 GCCCGGAGTCACTCACAAT 59.703 57.895 7.24 0.00 31.08 2.71
646 648 1.810151 GCCGTGTGCTGGAAAATTCTA 59.190 47.619 0.00 0.00 36.87 2.10
781 797 6.264970 AGCAAAGCAAAAGAGAAGAAGAAGAT 59.735 34.615 0.00 0.00 0.00 2.40
798 814 0.396974 AACCAAGGTGGAGCAAAGCA 60.397 50.000 0.18 0.00 40.96 3.91
802 818 0.550914 ACTGAACCAAGGTGGAGCAA 59.449 50.000 0.18 0.00 40.96 3.91
932 963 3.816994 ACAAAAGGGGGTATCGCTATTC 58.183 45.455 0.00 0.00 37.71 1.75
933 964 3.945640 ACAAAAGGGGGTATCGCTATT 57.054 42.857 0.00 0.00 37.71 1.73
934 965 3.551846 CAACAAAAGGGGGTATCGCTAT 58.448 45.455 0.00 0.00 37.71 2.97
935 966 2.356330 CCAACAAAAGGGGGTATCGCTA 60.356 50.000 0.00 0.00 37.71 4.26
936 967 1.615919 CCAACAAAAGGGGGTATCGCT 60.616 52.381 0.00 0.00 40.66 4.93
937 968 0.815095 CCAACAAAAGGGGGTATCGC 59.185 55.000 0.00 0.00 0.00 4.58
938 969 1.004979 TCCCAACAAAAGGGGGTATCG 59.995 52.381 0.00 0.00 46.77 2.92
939 970 2.911552 TCCCAACAAAAGGGGGTATC 57.088 50.000 0.00 0.00 46.77 2.24
940 971 2.725227 TCTTCCCAACAAAAGGGGGTAT 59.275 45.455 0.00 0.00 46.77 2.73
941 972 2.145298 TCTTCCCAACAAAAGGGGGTA 58.855 47.619 0.00 0.00 46.77 3.69
942 973 0.938192 TCTTCCCAACAAAAGGGGGT 59.062 50.000 0.00 0.00 46.77 4.95
943 974 2.095604 TTCTTCCCAACAAAAGGGGG 57.904 50.000 0.00 0.00 46.77 5.40
944 975 4.495690 TTTTTCTTCCCAACAAAAGGGG 57.504 40.909 0.00 0.00 46.77 4.79
964 995 3.118665 ACACACAATCAGCAAGCCTTTTT 60.119 39.130 0.00 0.00 0.00 1.94
965 996 2.431782 ACACACAATCAGCAAGCCTTTT 59.568 40.909 0.00 0.00 0.00 2.27
966 997 2.034124 ACACACAATCAGCAAGCCTTT 58.966 42.857 0.00 0.00 0.00 3.11
967 998 1.696063 ACACACAATCAGCAAGCCTT 58.304 45.000 0.00 0.00 0.00 4.35
968 999 2.430465 CTACACACAATCAGCAAGCCT 58.570 47.619 0.00 0.00 0.00 4.58
969 1000 1.135575 GCTACACACAATCAGCAAGCC 60.136 52.381 0.00 0.00 34.13 4.35
970 1001 1.808945 AGCTACACACAATCAGCAAGC 59.191 47.619 0.00 0.00 36.47 4.01
971 1002 3.620374 CCTAGCTACACACAATCAGCAAG 59.380 47.826 0.00 0.00 36.47 4.01
972 1003 3.599343 CCTAGCTACACACAATCAGCAA 58.401 45.455 0.00 0.00 36.47 3.91
973 1004 2.093500 CCCTAGCTACACACAATCAGCA 60.093 50.000 0.00 0.00 36.47 4.41
974 1005 2.555199 CCCTAGCTACACACAATCAGC 58.445 52.381 0.00 0.00 0.00 4.26
975 1006 2.766263 TCCCCTAGCTACACACAATCAG 59.234 50.000 0.00 0.00 0.00 2.90
976 1007 2.827755 TCCCCTAGCTACACACAATCA 58.172 47.619 0.00 0.00 0.00 2.57
977 1008 3.798202 CTTCCCCTAGCTACACACAATC 58.202 50.000 0.00 0.00 0.00 2.67
978 1009 2.092914 GCTTCCCCTAGCTACACACAAT 60.093 50.000 0.00 0.00 38.15 2.71
979 1010 1.278127 GCTTCCCCTAGCTACACACAA 59.722 52.381 0.00 0.00 38.15 3.33
980 1011 0.902531 GCTTCCCCTAGCTACACACA 59.097 55.000 0.00 0.00 38.15 3.72
981 1012 0.902531 TGCTTCCCCTAGCTACACAC 59.097 55.000 0.00 0.00 41.76 3.82
982 1013 1.486310 CATGCTTCCCCTAGCTACACA 59.514 52.381 0.00 0.00 41.76 3.72
983 1014 1.811941 GCATGCTTCCCCTAGCTACAC 60.812 57.143 11.37 0.00 41.76 2.90
984 1015 0.469917 GCATGCTTCCCCTAGCTACA 59.530 55.000 11.37 0.00 41.76 2.74
985 1016 0.250510 GGCATGCTTCCCCTAGCTAC 60.251 60.000 18.92 0.00 41.76 3.58
986 1017 0.694105 TGGCATGCTTCCCCTAGCTA 60.694 55.000 18.92 0.00 41.76 3.32
987 1018 1.574526 TTGGCATGCTTCCCCTAGCT 61.575 55.000 18.92 0.00 41.76 3.32
988 1019 1.076777 TTGGCATGCTTCCCCTAGC 60.077 57.895 18.92 0.00 41.59 3.42
989 1020 0.034186 TGTTGGCATGCTTCCCCTAG 60.034 55.000 18.92 0.00 0.00 3.02
990 1021 0.407528 TTGTTGGCATGCTTCCCCTA 59.592 50.000 18.92 0.00 0.00 3.53
991 1022 1.155859 TTGTTGGCATGCTTCCCCT 59.844 52.632 18.92 0.00 0.00 4.79
992 1023 1.293179 GTTGTTGGCATGCTTCCCC 59.707 57.895 18.92 0.10 0.00 4.81
1151 1182 0.970640 TAGCACCAAGAGCACGGTAA 59.029 50.000 0.00 0.00 32.98 2.85
1192 1223 0.395311 TCCTCGACGTAGGCCTTGAT 60.395 55.000 12.58 0.00 36.51 2.57
1532 1608 3.257561 CAAGGCCGAGCGTGATCG 61.258 66.667 0.00 0.00 42.36 3.69
1557 1633 4.463879 CTGAGCTCCAGCCCACGG 62.464 72.222 12.15 0.00 43.38 4.94
1675 1763 2.228822 GGATCGGCAACACACAAATTCT 59.771 45.455 0.00 0.00 0.00 2.40
1716 1804 3.563808 AGACGAAGCAAAATACAACAGCA 59.436 39.130 0.00 0.00 0.00 4.41
1717 1805 4.147219 AGACGAAGCAAAATACAACAGC 57.853 40.909 0.00 0.00 0.00 4.40
1718 1806 5.747565 TGAAGACGAAGCAAAATACAACAG 58.252 37.500 0.00 0.00 0.00 3.16
1796 1884 6.035843 CCTGCTCAATAACGTTGCAATAAAT 58.964 36.000 11.99 0.00 33.07 1.40
1830 1918 4.749245 ACAACGGCAAATCAGTTCTTAG 57.251 40.909 0.00 0.00 30.65 2.18
1855 1943 9.404848 CCGATTGGGAGATGTAAGTAGTATATA 57.595 37.037 0.00 0.00 38.47 0.86
1984 2072 4.142138 GGATGGAGACGTTCTCATAAGTGT 60.142 45.833 14.26 0.00 45.12 3.55
1989 2077 3.381590 CAGTGGATGGAGACGTTCTCATA 59.618 47.826 14.26 5.84 45.12 2.15
2041 2232 6.412362 TGGCACTGGTGTTTGTATTTTATT 57.588 33.333 2.64 0.00 0.00 1.40
2080 2305 3.735237 AACACGTCCTAGCTCATATGG 57.265 47.619 2.13 0.00 0.00 2.74
2082 2307 3.889538 TGCTAACACGTCCTAGCTCATAT 59.110 43.478 20.50 0.00 40.99 1.78
2083 2308 3.284617 TGCTAACACGTCCTAGCTCATA 58.715 45.455 20.50 3.92 40.99 2.15
2084 2309 2.100197 TGCTAACACGTCCTAGCTCAT 58.900 47.619 20.50 0.00 40.99 2.90
2085 2310 1.541379 TGCTAACACGTCCTAGCTCA 58.459 50.000 20.50 4.77 40.99 4.26
2086 2311 2.159226 ACATGCTAACACGTCCTAGCTC 60.159 50.000 20.50 0.96 40.99 4.09
2087 2312 1.825474 ACATGCTAACACGTCCTAGCT 59.175 47.619 20.50 0.00 40.99 3.32
2091 2316 4.530710 TTCTAACATGCTAACACGTCCT 57.469 40.909 0.00 0.00 0.00 3.85
2101 2326 8.408601 CCTGCATTAAACTATTTCTAACATGCT 58.591 33.333 0.00 0.00 0.00 3.79
2230 2455 0.249120 ATTGAATCGAGGGCGTCACA 59.751 50.000 8.06 0.00 38.98 3.58
2231 2456 0.931005 GATTGAATCGAGGGCGTCAC 59.069 55.000 8.06 0.00 38.98 3.67
2232 2457 3.362581 GATTGAATCGAGGGCGTCA 57.637 52.632 8.06 0.00 38.98 4.35
2243 2468 9.504710 GCGTATATGATTAGTCTACGATTGAAT 57.495 33.333 8.94 0.00 37.87 2.57
2244 2469 8.508875 TGCGTATATGATTAGTCTACGATTGAA 58.491 33.333 8.94 0.00 37.87 2.69
2245 2470 8.036273 TGCGTATATGATTAGTCTACGATTGA 57.964 34.615 8.94 0.00 37.87 2.57
2246 2471 8.669394 TTGCGTATATGATTAGTCTACGATTG 57.331 34.615 8.94 0.00 37.87 2.67
2247 2472 9.856488 ATTTGCGTATATGATTAGTCTACGATT 57.144 29.630 8.94 0.00 37.87 3.34
2248 2473 9.290483 CATTTGCGTATATGATTAGTCTACGAT 57.710 33.333 8.94 0.00 37.87 3.73
2249 2474 8.294577 ACATTTGCGTATATGATTAGTCTACGA 58.705 33.333 10.61 0.00 37.87 3.43
2250 2475 8.365938 CACATTTGCGTATATGATTAGTCTACG 58.634 37.037 10.61 0.00 38.48 3.51
2251 2476 9.193133 ACACATTTGCGTATATGATTAGTCTAC 57.807 33.333 10.61 0.00 0.00 2.59
2253 2478 9.193133 GTACACATTTGCGTATATGATTAGTCT 57.807 33.333 10.61 0.00 0.00 3.24
2254 2479 8.154038 CGTACACATTTGCGTATATGATTAGTC 58.846 37.037 10.61 0.00 0.00 2.59
2255 2480 7.863877 TCGTACACATTTGCGTATATGATTAGT 59.136 33.333 10.61 6.26 0.00 2.24
2256 2481 8.222984 TCGTACACATTTGCGTATATGATTAG 57.777 34.615 10.61 1.38 0.00 1.73
2257 2482 8.751302 ATCGTACACATTTGCGTATATGATTA 57.249 30.769 10.61 0.00 0.00 1.75
2258 2483 7.383843 TGATCGTACACATTTGCGTATATGATT 59.616 33.333 10.61 0.39 0.00 2.57
2259 2484 6.866248 TGATCGTACACATTTGCGTATATGAT 59.134 34.615 10.61 0.00 0.00 2.45
2260 2485 6.210078 TGATCGTACACATTTGCGTATATGA 58.790 36.000 10.61 0.00 0.00 2.15
2261 2486 6.446659 TGATCGTACACATTTGCGTATATG 57.553 37.500 2.60 2.60 0.00 1.78
2262 2487 6.921307 TCTTGATCGTACACATTTGCGTATAT 59.079 34.615 0.00 0.00 0.00 0.86
2263 2488 6.267070 TCTTGATCGTACACATTTGCGTATA 58.733 36.000 0.00 0.00 0.00 1.47
2264 2489 5.106442 TCTTGATCGTACACATTTGCGTAT 58.894 37.500 0.00 0.00 0.00 3.06
2265 2490 4.487019 TCTTGATCGTACACATTTGCGTA 58.513 39.130 0.00 0.00 0.00 4.42
2266 2491 3.322369 TCTTGATCGTACACATTTGCGT 58.678 40.909 0.00 0.00 0.00 5.24
2267 2492 3.989705 TCTTGATCGTACACATTTGCG 57.010 42.857 0.00 0.00 0.00 4.85
2268 2493 5.469373 TGATCTTGATCGTACACATTTGC 57.531 39.130 6.19 0.00 0.00 3.68
2269 2494 6.313658 TCCTTGATCTTGATCGTACACATTTG 59.686 38.462 6.19 0.00 0.00 2.32
2270 2495 6.313905 GTCCTTGATCTTGATCGTACACATTT 59.686 38.462 6.19 0.00 0.00 2.32
2271 2496 5.812642 GTCCTTGATCTTGATCGTACACATT 59.187 40.000 6.19 0.00 0.00 2.71
2272 2497 5.127845 AGTCCTTGATCTTGATCGTACACAT 59.872 40.000 6.19 0.00 0.00 3.21
2273 2498 4.462834 AGTCCTTGATCTTGATCGTACACA 59.537 41.667 6.19 0.00 0.00 3.72
2274 2499 5.000012 AGTCCTTGATCTTGATCGTACAC 58.000 43.478 6.19 1.73 0.00 2.90
2275 2500 4.705023 TGAGTCCTTGATCTTGATCGTACA 59.295 41.667 6.19 0.00 0.00 2.90
2276 2501 5.038033 GTGAGTCCTTGATCTTGATCGTAC 58.962 45.833 6.19 2.53 0.00 3.67
2277 2502 4.201920 CGTGAGTCCTTGATCTTGATCGTA 60.202 45.833 6.19 0.00 0.00 3.43
2278 2503 3.428180 CGTGAGTCCTTGATCTTGATCGT 60.428 47.826 6.19 0.00 0.00 3.73
2279 2504 3.111838 CGTGAGTCCTTGATCTTGATCG 58.888 50.000 6.19 0.00 0.00 3.69
2280 2505 3.131223 TCCGTGAGTCCTTGATCTTGATC 59.869 47.826 3.82 3.82 0.00 2.92
2281 2506 3.099905 TCCGTGAGTCCTTGATCTTGAT 58.900 45.455 0.00 0.00 0.00 2.57
2282 2507 2.525368 TCCGTGAGTCCTTGATCTTGA 58.475 47.619 0.00 0.00 0.00 3.02
2283 2508 3.319137 TTCCGTGAGTCCTTGATCTTG 57.681 47.619 0.00 0.00 0.00 3.02
2284 2509 3.578716 TCTTTCCGTGAGTCCTTGATCTT 59.421 43.478 0.00 0.00 0.00 2.40
2285 2510 3.165875 TCTTTCCGTGAGTCCTTGATCT 58.834 45.455 0.00 0.00 0.00 2.75
2286 2511 3.594603 TCTTTCCGTGAGTCCTTGATC 57.405 47.619 0.00 0.00 0.00 2.92
2287 2512 5.363868 TGATATCTTTCCGTGAGTCCTTGAT 59.636 40.000 3.98 0.00 0.00 2.57
2288 2513 4.709886 TGATATCTTTCCGTGAGTCCTTGA 59.290 41.667 3.98 0.00 0.00 3.02
2289 2514 4.806247 GTGATATCTTTCCGTGAGTCCTTG 59.194 45.833 3.98 0.00 0.00 3.61
2290 2515 4.466370 TGTGATATCTTTCCGTGAGTCCTT 59.534 41.667 3.98 0.00 0.00 3.36
2291 2516 4.023980 TGTGATATCTTTCCGTGAGTCCT 58.976 43.478 3.98 0.00 0.00 3.85
2292 2517 4.386867 TGTGATATCTTTCCGTGAGTCC 57.613 45.455 3.98 0.00 0.00 3.85
2293 2518 5.062308 GTGTTGTGATATCTTTCCGTGAGTC 59.938 44.000 3.98 0.00 0.00 3.36
2294 2519 4.929808 GTGTTGTGATATCTTTCCGTGAGT 59.070 41.667 3.98 0.00 0.00 3.41
2295 2520 4.929211 TGTGTTGTGATATCTTTCCGTGAG 59.071 41.667 3.98 0.00 0.00 3.51
2296 2521 4.688879 GTGTGTTGTGATATCTTTCCGTGA 59.311 41.667 3.98 0.00 0.00 4.35
2297 2522 4.142902 GGTGTGTTGTGATATCTTTCCGTG 60.143 45.833 3.98 0.00 0.00 4.94
2298 2523 4.000988 GGTGTGTTGTGATATCTTTCCGT 58.999 43.478 3.98 0.00 0.00 4.69
2299 2524 4.093408 CAGGTGTGTTGTGATATCTTTCCG 59.907 45.833 3.98 0.00 0.00 4.30
2300 2525 5.003804 ACAGGTGTGTTGTGATATCTTTCC 58.996 41.667 3.98 0.00 30.30 3.13
2301 2526 7.063544 GTCTACAGGTGTGTTGTGATATCTTTC 59.936 40.741 3.98 0.00 38.19 2.62
2302 2527 6.874134 GTCTACAGGTGTGTTGTGATATCTTT 59.126 38.462 3.98 0.00 38.19 2.52
2303 2528 6.014584 TGTCTACAGGTGTGTTGTGATATCTT 60.015 38.462 3.98 0.00 38.19 2.40
2304 2529 5.480422 TGTCTACAGGTGTGTTGTGATATCT 59.520 40.000 3.98 0.00 38.19 1.98
2305 2530 5.577164 GTGTCTACAGGTGTGTTGTGATATC 59.423 44.000 0.00 0.00 38.19 1.63
2306 2531 5.011635 TGTGTCTACAGGTGTGTTGTGATAT 59.988 40.000 0.00 0.00 38.19 1.63
2307 2532 4.342665 TGTGTCTACAGGTGTGTTGTGATA 59.657 41.667 0.00 0.00 38.19 2.15
2308 2533 3.133901 TGTGTCTACAGGTGTGTTGTGAT 59.866 43.478 0.00 0.00 38.19 3.06
2309 2534 2.498078 TGTGTCTACAGGTGTGTTGTGA 59.502 45.455 0.00 0.00 38.19 3.58
2310 2535 2.899976 TGTGTCTACAGGTGTGTTGTG 58.100 47.619 0.00 0.00 38.19 3.33
2311 2536 3.620427 TTGTGTCTACAGGTGTGTTGT 57.380 42.857 0.00 0.00 38.23 3.32
2312 2537 5.065859 TCAATTTGTGTCTACAGGTGTGTTG 59.934 40.000 0.00 0.00 38.23 3.33
2313 2538 5.189928 TCAATTTGTGTCTACAGGTGTGTT 58.810 37.500 0.00 0.00 38.23 3.32
2314 2539 4.776349 TCAATTTGTGTCTACAGGTGTGT 58.224 39.130 0.00 0.00 38.23 3.72
2315 2540 5.749596 TTCAATTTGTGTCTACAGGTGTG 57.250 39.130 0.00 0.00 38.23 3.82
2316 2541 6.767524 TTTTCAATTTGTGTCTACAGGTGT 57.232 33.333 0.00 0.00 38.23 4.16
2317 2542 9.912634 ATTATTTTCAATTTGTGTCTACAGGTG 57.087 29.630 0.00 0.00 38.23 4.00
2342 2567 9.720769 CCCCGTCTTGTAATATAAAGATTGTAT 57.279 33.333 0.00 0.00 35.03 2.29
2343 2568 8.926374 TCCCCGTCTTGTAATATAAAGATTGTA 58.074 33.333 0.00 0.00 35.03 2.41
2344 2569 7.713942 GTCCCCGTCTTGTAATATAAAGATTGT 59.286 37.037 0.00 0.00 35.03 2.71
2345 2570 7.172703 GGTCCCCGTCTTGTAATATAAAGATTG 59.827 40.741 0.00 0.00 35.03 2.67
2346 2571 7.072076 AGGTCCCCGTCTTGTAATATAAAGATT 59.928 37.037 0.00 0.00 35.03 2.40
2347 2572 6.557633 AGGTCCCCGTCTTGTAATATAAAGAT 59.442 38.462 0.00 0.00 35.03 2.40
2348 2573 5.901276 AGGTCCCCGTCTTGTAATATAAAGA 59.099 40.000 0.00 0.00 0.00 2.52
2349 2574 6.170846 AGGTCCCCGTCTTGTAATATAAAG 57.829 41.667 0.00 0.00 0.00 1.85
2350 2575 5.221303 CGAGGTCCCCGTCTTGTAATATAAA 60.221 44.000 0.00 0.00 0.00 1.40
2351 2576 4.279169 CGAGGTCCCCGTCTTGTAATATAA 59.721 45.833 0.00 0.00 0.00 0.98
2352 2577 3.822735 CGAGGTCCCCGTCTTGTAATATA 59.177 47.826 0.00 0.00 0.00 0.86
2353 2578 2.626743 CGAGGTCCCCGTCTTGTAATAT 59.373 50.000 0.00 0.00 0.00 1.28
2354 2579 2.026641 CGAGGTCCCCGTCTTGTAATA 58.973 52.381 0.00 0.00 0.00 0.98
2355 2580 0.822164 CGAGGTCCCCGTCTTGTAAT 59.178 55.000 0.00 0.00 0.00 1.89
2356 2581 0.251297 TCGAGGTCCCCGTCTTGTAA 60.251 55.000 0.00 0.00 0.00 2.41
2357 2582 0.962356 GTCGAGGTCCCCGTCTTGTA 60.962 60.000 0.00 0.00 0.00 2.41
2358 2583 2.116772 TCGAGGTCCCCGTCTTGT 59.883 61.111 0.00 0.00 0.00 3.16
2359 2584 2.572284 GTCGAGGTCCCCGTCTTG 59.428 66.667 0.00 0.00 0.00 3.02
2360 2585 3.060615 CGTCGAGGTCCCCGTCTT 61.061 66.667 0.00 0.00 0.00 3.01
2374 2599 2.981140 GAGCTTATGTATTCGAGCCGTC 59.019 50.000 0.00 0.00 35.79 4.79
2375 2600 2.604855 CGAGCTTATGTATTCGAGCCGT 60.605 50.000 0.00 0.00 35.79 5.68
2376 2601 1.979469 CGAGCTTATGTATTCGAGCCG 59.021 52.381 0.00 0.00 35.79 5.52
2377 2602 3.284323 TCGAGCTTATGTATTCGAGCC 57.716 47.619 0.00 0.00 37.18 4.70
2378 2603 5.856986 TGTATTCGAGCTTATGTATTCGAGC 59.143 40.000 0.00 0.00 42.23 5.03
2379 2604 6.856426 TGTGTATTCGAGCTTATGTATTCGAG 59.144 38.462 0.00 0.00 42.23 4.04
2380 2605 6.731164 TGTGTATTCGAGCTTATGTATTCGA 58.269 36.000 0.00 0.00 39.97 3.71
2381 2606 6.986424 TGTGTATTCGAGCTTATGTATTCG 57.014 37.500 0.00 0.00 34.56 3.34
2382 2607 8.575565 TCTTGTGTATTCGAGCTTATGTATTC 57.424 34.615 0.00 0.00 0.00 1.75
2383 2608 8.198109 ACTCTTGTGTATTCGAGCTTATGTATT 58.802 33.333 0.00 0.00 0.00 1.89
2384 2609 7.717568 ACTCTTGTGTATTCGAGCTTATGTAT 58.282 34.615 0.00 0.00 0.00 2.29
2385 2610 7.096884 ACTCTTGTGTATTCGAGCTTATGTA 57.903 36.000 0.00 0.00 0.00 2.29
2386 2611 5.967088 ACTCTTGTGTATTCGAGCTTATGT 58.033 37.500 0.00 0.00 0.00 2.29
2387 2612 6.036470 TGACTCTTGTGTATTCGAGCTTATG 58.964 40.000 0.00 0.00 0.00 1.90
2388 2613 6.208988 TGACTCTTGTGTATTCGAGCTTAT 57.791 37.500 0.00 0.00 0.00 1.73
2389 2614 5.638596 TGACTCTTGTGTATTCGAGCTTA 57.361 39.130 0.00 0.00 0.00 3.09
2390 2615 4.489810 CTGACTCTTGTGTATTCGAGCTT 58.510 43.478 0.00 0.00 0.00 3.74
2391 2616 3.674682 GCTGACTCTTGTGTATTCGAGCT 60.675 47.826 0.00 0.00 0.00 4.09
2392 2617 2.600867 GCTGACTCTTGTGTATTCGAGC 59.399 50.000 0.00 0.00 0.00 5.03
2393 2618 2.848887 CGCTGACTCTTGTGTATTCGAG 59.151 50.000 0.00 0.00 0.00 4.04
2394 2619 2.415491 CCGCTGACTCTTGTGTATTCGA 60.415 50.000 0.00 0.00 0.00 3.71
2395 2620 1.920574 CCGCTGACTCTTGTGTATTCG 59.079 52.381 0.00 0.00 0.00 3.34
2396 2621 3.232213 TCCGCTGACTCTTGTGTATTC 57.768 47.619 0.00 0.00 0.00 1.75
2397 2622 3.589988 CTTCCGCTGACTCTTGTGTATT 58.410 45.455 0.00 0.00 0.00 1.89
2398 2623 2.675317 GCTTCCGCTGACTCTTGTGTAT 60.675 50.000 0.00 0.00 0.00 2.29
2399 2624 1.336887 GCTTCCGCTGACTCTTGTGTA 60.337 52.381 0.00 0.00 0.00 2.90
2400 2625 0.601311 GCTTCCGCTGACTCTTGTGT 60.601 55.000 0.00 0.00 0.00 3.72
2401 2626 0.601046 TGCTTCCGCTGACTCTTGTG 60.601 55.000 0.00 0.00 36.97 3.33
2402 2627 0.106708 TTGCTTCCGCTGACTCTTGT 59.893 50.000 0.00 0.00 36.97 3.16
2403 2628 0.514691 GTTGCTTCCGCTGACTCTTG 59.485 55.000 0.00 0.00 36.97 3.02
2404 2629 0.106708 TGTTGCTTCCGCTGACTCTT 59.893 50.000 0.00 0.00 36.97 2.85
2405 2630 0.106708 TTGTTGCTTCCGCTGACTCT 59.893 50.000 0.00 0.00 36.97 3.24
2406 2631 1.160137 ATTGTTGCTTCCGCTGACTC 58.840 50.000 0.00 0.00 36.97 3.36
2407 2632 2.472695 TATTGTTGCTTCCGCTGACT 57.527 45.000 0.00 0.00 36.97 3.41
2408 2633 2.939103 AGATATTGTTGCTTCCGCTGAC 59.061 45.455 0.00 0.00 36.97 3.51
2409 2634 2.938451 CAGATATTGTTGCTTCCGCTGA 59.062 45.455 0.00 0.00 36.97 4.26
2410 2635 2.938451 TCAGATATTGTTGCTTCCGCTG 59.062 45.455 0.00 0.00 36.97 5.18
2411 2636 3.201290 CTCAGATATTGTTGCTTCCGCT 58.799 45.455 0.00 0.00 36.97 5.52
2412 2637 2.939103 ACTCAGATATTGTTGCTTCCGC 59.061 45.455 0.00 0.00 0.00 5.54
2413 2638 9.077674 GTATATACTCAGATATTGTTGCTTCCG 57.922 37.037 5.58 0.00 0.00 4.30
2414 2639 9.929180 TGTATATACTCAGATATTGTTGCTTCC 57.071 33.333 13.89 0.00 0.00 3.46
2459 2684 6.072112 TGTTTTTGTGCTAGCCTTCTTAAG 57.928 37.500 13.29 0.00 0.00 1.85
2460 2685 6.458232 TTGTTTTTGTGCTAGCCTTCTTAA 57.542 33.333 13.29 0.00 0.00 1.85
2461 2686 6.648879 ATTGTTTTTGTGCTAGCCTTCTTA 57.351 33.333 13.29 0.00 0.00 2.10
2462 2687 5.535753 ATTGTTTTTGTGCTAGCCTTCTT 57.464 34.783 13.29 0.00 0.00 2.52
2463 2688 6.840780 ATATTGTTTTTGTGCTAGCCTTCT 57.159 33.333 13.29 0.00 0.00 2.85
2464 2689 7.090173 TCAATATTGTTTTTGTGCTAGCCTTC 58.910 34.615 13.29 3.48 0.00 3.46
2465 2690 6.991938 TCAATATTGTTTTTGTGCTAGCCTT 58.008 32.000 13.29 0.00 0.00 4.35
2466 2691 6.588719 TCAATATTGTTTTTGTGCTAGCCT 57.411 33.333 13.29 0.00 0.00 4.58
2467 2692 6.197096 CGATCAATATTGTTTTTGTGCTAGCC 59.803 38.462 13.29 4.15 0.00 3.93
2468 2693 6.966632 TCGATCAATATTGTTTTTGTGCTAGC 59.033 34.615 14.97 8.10 0.00 3.42
2469 2694 8.390354 TCTCGATCAATATTGTTTTTGTGCTAG 58.610 33.333 14.97 0.00 0.00 3.42
2470 2695 8.262715 TCTCGATCAATATTGTTTTTGTGCTA 57.737 30.769 14.97 0.00 0.00 3.49
2471 2696 7.144722 TCTCGATCAATATTGTTTTTGTGCT 57.855 32.000 14.97 0.00 0.00 4.40
2472 2697 7.008628 CCTTCTCGATCAATATTGTTTTTGTGC 59.991 37.037 14.97 0.00 0.00 4.57
2473 2698 7.008628 GCCTTCTCGATCAATATTGTTTTTGTG 59.991 37.037 14.97 6.94 0.00 3.33
2474 2699 7.029563 GCCTTCTCGATCAATATTGTTTTTGT 58.970 34.615 14.97 0.00 0.00 2.83
2475 2700 7.028962 TGCCTTCTCGATCAATATTGTTTTTG 58.971 34.615 14.97 6.14 0.00 2.44
2476 2701 7.156876 TGCCTTCTCGATCAATATTGTTTTT 57.843 32.000 14.97 0.00 0.00 1.94
2477 2702 6.757897 TGCCTTCTCGATCAATATTGTTTT 57.242 33.333 14.97 2.12 0.00 2.43
2478 2703 6.183360 CCTTGCCTTCTCGATCAATATTGTTT 60.183 38.462 14.97 4.54 0.00 2.83
2479 2704 5.297776 CCTTGCCTTCTCGATCAATATTGTT 59.702 40.000 14.97 7.03 0.00 2.83
2480 2705 4.818546 CCTTGCCTTCTCGATCAATATTGT 59.181 41.667 14.97 3.05 0.00 2.71
2481 2706 4.320057 GCCTTGCCTTCTCGATCAATATTG 60.320 45.833 9.29 9.29 0.00 1.90
2482 2707 3.817647 GCCTTGCCTTCTCGATCAATATT 59.182 43.478 0.00 0.00 0.00 1.28
2483 2708 3.406764 GCCTTGCCTTCTCGATCAATAT 58.593 45.455 0.00 0.00 0.00 1.28
2484 2709 2.485479 GGCCTTGCCTTCTCGATCAATA 60.485 50.000 0.00 0.00 46.69 1.90
2485 2710 1.673168 GCCTTGCCTTCTCGATCAAT 58.327 50.000 0.00 0.00 0.00 2.57
2486 2711 0.392998 GGCCTTGCCTTCTCGATCAA 60.393 55.000 0.00 0.00 46.69 2.57
2487 2712 1.221840 GGCCTTGCCTTCTCGATCA 59.778 57.895 0.00 0.00 46.69 2.92
2488 2713 4.132999 GGCCTTGCCTTCTCGATC 57.867 61.111 0.00 0.00 46.69 3.69
2507 2732 3.703513 TAGGAGGCTCCCAGGCAGG 62.704 68.421 29.62 0.00 44.19 4.85
2508 2733 1.690633 TTAGGAGGCTCCCAGGCAG 60.691 63.158 29.62 0.00 44.19 4.85
2509 2734 1.995626 GTTAGGAGGCTCCCAGGCA 60.996 63.158 29.62 7.57 44.19 4.75
2510 2735 0.398664 TAGTTAGGAGGCTCCCAGGC 60.399 60.000 29.62 16.91 37.19 4.85
2511 2736 1.062810 AGTAGTTAGGAGGCTCCCAGG 60.063 57.143 29.62 0.00 37.19 4.45
2512 2737 2.312390 GAGTAGTTAGGAGGCTCCCAG 58.688 57.143 29.62 0.00 37.19 4.45
2513 2738 1.063114 GGAGTAGTTAGGAGGCTCCCA 60.063 57.143 29.62 14.71 39.69 4.37
2514 2739 1.063114 TGGAGTAGTTAGGAGGCTCCC 60.063 57.143 29.62 14.83 43.64 4.30
2515 2740 2.456073 TGGAGTAGTTAGGAGGCTCC 57.544 55.000 26.42 26.42 44.31 4.70
2516 2741 3.367321 ACTTGGAGTAGTTAGGAGGCTC 58.633 50.000 5.78 5.78 0.00 4.70
2517 2742 3.367321 GACTTGGAGTAGTTAGGAGGCT 58.633 50.000 0.00 0.00 0.00 4.58
2518 2743 2.099427 CGACTTGGAGTAGTTAGGAGGC 59.901 54.545 0.00 0.00 0.00 4.70
2519 2744 3.354467 ACGACTTGGAGTAGTTAGGAGG 58.646 50.000 0.00 0.00 29.60 4.30
2520 2745 4.008330 TGACGACTTGGAGTAGTTAGGAG 58.992 47.826 0.00 0.00 34.19 3.69
2521 2746 4.008330 CTGACGACTTGGAGTAGTTAGGA 58.992 47.826 0.00 0.00 35.09 2.94
2522 2747 3.427773 GCTGACGACTTGGAGTAGTTAGG 60.428 52.174 12.49 2.16 37.71 2.69
2523 2748 3.728268 CGCTGACGACTTGGAGTAGTTAG 60.728 52.174 8.17 8.17 43.93 2.34
2524 2749 2.161012 CGCTGACGACTTGGAGTAGTTA 59.839 50.000 0.00 0.00 43.93 2.24
2525 2750 1.068472 CGCTGACGACTTGGAGTAGTT 60.068 52.381 0.00 0.00 43.93 2.24
2526 2751 0.522180 CGCTGACGACTTGGAGTAGT 59.478 55.000 0.00 0.00 43.93 2.73
2527 2752 0.179161 CCGCTGACGACTTGGAGTAG 60.179 60.000 0.00 0.00 43.93 2.57
2528 2753 0.892358 ACCGCTGACGACTTGGAGTA 60.892 55.000 0.00 0.00 43.93 2.59
2529 2754 2.143594 GACCGCTGACGACTTGGAGT 62.144 60.000 0.00 0.00 43.93 3.85
2530 2755 1.444553 GACCGCTGACGACTTGGAG 60.445 63.158 0.00 0.00 43.93 3.86
2531 2756 2.649034 GACCGCTGACGACTTGGA 59.351 61.111 0.00 0.00 43.93 3.53
2532 2757 2.805353 CGACCGCTGACGACTTGG 60.805 66.667 0.00 0.00 43.93 3.61
2533 2758 2.050351 ACGACCGCTGACGACTTG 60.050 61.111 7.02 0.00 43.93 3.16
2534 2759 2.254651 GACGACCGCTGACGACTT 59.745 61.111 7.02 0.00 43.93 3.01
2535 2760 2.976350 TGACGACCGCTGACGACT 60.976 61.111 7.02 0.00 43.93 4.18
2536 2761 2.799916 GTGACGACCGCTGACGAC 60.800 66.667 7.02 1.37 43.93 4.34
2537 2762 4.379143 CGTGACGACCGCTGACGA 62.379 66.667 0.00 0.00 43.93 4.20
2538 2763 3.299304 TACGTGACGACCGCTGACG 62.299 63.158 13.70 0.00 39.67 4.35
2539 2764 1.511464 CTACGTGACGACCGCTGAC 60.511 63.158 13.70 0.00 0.00 3.51
2540 2765 0.670239 TACTACGTGACGACCGCTGA 60.670 55.000 13.70 0.00 0.00 4.26
2541 2766 0.247576 CTACTACGTGACGACCGCTG 60.248 60.000 13.70 0.00 0.00 5.18
2542 2767 0.671781 ACTACTACGTGACGACCGCT 60.672 55.000 13.70 0.00 0.00 5.52
2543 2768 0.999406 TACTACTACGTGACGACCGC 59.001 55.000 13.70 0.00 0.00 5.68
2544 2769 1.590238 CCTACTACTACGTGACGACCG 59.410 57.143 13.70 1.40 0.00 4.79
2545 2770 1.328986 GCCTACTACTACGTGACGACC 59.671 57.143 13.70 0.00 0.00 4.79
2546 2771 2.002586 TGCCTACTACTACGTGACGAC 58.997 52.381 13.70 0.00 0.00 4.34
2547 2772 2.002586 GTGCCTACTACTACGTGACGA 58.997 52.381 13.70 0.00 0.00 4.20
2548 2773 1.063174 GGTGCCTACTACTACGTGACG 59.937 57.143 2.24 2.24 0.00 4.35
2549 2774 1.403323 GGGTGCCTACTACTACGTGAC 59.597 57.143 0.00 0.00 0.00 3.67
2550 2775 1.283029 AGGGTGCCTACTACTACGTGA 59.717 52.381 0.00 0.00 28.47 4.35
2551 2776 1.674962 GAGGGTGCCTACTACTACGTG 59.325 57.143 0.00 0.00 31.76 4.49
2552 2777 1.745141 CGAGGGTGCCTACTACTACGT 60.745 57.143 0.00 0.00 31.76 3.57
2553 2778 0.942962 CGAGGGTGCCTACTACTACG 59.057 60.000 0.00 0.00 31.76 3.51
2554 2779 1.316651 CCGAGGGTGCCTACTACTAC 58.683 60.000 0.00 0.00 31.76 2.73
2555 2780 0.184451 CCCGAGGGTGCCTACTACTA 59.816 60.000 0.00 0.00 31.76 1.82
2556 2781 1.076192 CCCGAGGGTGCCTACTACT 60.076 63.158 0.00 0.00 31.76 2.57
2557 2782 2.132352 CCCCGAGGGTGCCTACTAC 61.132 68.421 7.48 0.00 38.25 2.73
2558 2783 2.281091 CCCCGAGGGTGCCTACTA 59.719 66.667 7.48 0.00 38.25 1.82
2568 2793 0.395311 TGACTACTGCTACCCCGAGG 60.395 60.000 0.00 0.00 40.04 4.63
2569 2794 1.609555 GATGACTACTGCTACCCCGAG 59.390 57.143 0.00 0.00 0.00 4.63
2570 2795 1.064240 TGATGACTACTGCTACCCCGA 60.064 52.381 0.00 0.00 0.00 5.14
2571 2796 1.338337 CTGATGACTACTGCTACCCCG 59.662 57.143 0.00 0.00 0.00 5.73
2572 2797 2.101582 CACTGATGACTACTGCTACCCC 59.898 54.545 0.00 0.00 0.00 4.95
2573 2798 2.101582 CCACTGATGACTACTGCTACCC 59.898 54.545 0.00 0.00 0.00 3.69
2574 2799 2.761208 ACCACTGATGACTACTGCTACC 59.239 50.000 0.00 0.00 0.00 3.18
2575 2800 3.193691 ACACCACTGATGACTACTGCTAC 59.806 47.826 0.00 0.00 0.00 3.58
2576 2801 3.431415 ACACCACTGATGACTACTGCTA 58.569 45.455 0.00 0.00 0.00 3.49
2577 2802 2.232452 GACACCACTGATGACTACTGCT 59.768 50.000 0.00 0.00 0.00 4.24
2578 2803 2.611518 GACACCACTGATGACTACTGC 58.388 52.381 0.00 0.00 0.00 4.40
2579 2804 2.229062 ACGACACCACTGATGACTACTG 59.771 50.000 0.00 0.00 0.00 2.74
2580 2805 2.229062 CACGACACCACTGATGACTACT 59.771 50.000 0.00 0.00 0.00 2.57
2581 2806 2.030185 ACACGACACCACTGATGACTAC 60.030 50.000 0.00 0.00 0.00 2.73
2582 2807 2.030274 CACACGACACCACTGATGACTA 60.030 50.000 0.00 0.00 0.00 2.59
2583 2808 1.040646 ACACGACACCACTGATGACT 58.959 50.000 0.00 0.00 0.00 3.41
2584 2809 1.139989 CACACGACACCACTGATGAC 58.860 55.000 0.00 0.00 0.00 3.06
2585 2810 0.033366 CCACACGACACCACTGATGA 59.967 55.000 0.00 0.00 0.00 2.92
2586 2811 1.568612 GCCACACGACACCACTGATG 61.569 60.000 0.00 0.00 0.00 3.07
2587 2812 1.301716 GCCACACGACACCACTGAT 60.302 57.895 0.00 0.00 0.00 2.90
2588 2813 2.108157 GCCACACGACACCACTGA 59.892 61.111 0.00 0.00 0.00 3.41
2589 2814 1.956170 GAGCCACACGACACCACTG 60.956 63.158 0.00 0.00 0.00 3.66
2590 2815 1.758440 ATGAGCCACACGACACCACT 61.758 55.000 0.00 0.00 0.00 4.00
2591 2816 1.301716 ATGAGCCACACGACACCAC 60.302 57.895 0.00 0.00 0.00 4.16
2592 2817 1.301637 CATGAGCCACACGACACCA 60.302 57.895 0.00 0.00 0.00 4.17
2593 2818 2.034879 CCATGAGCCACACGACACC 61.035 63.158 0.00 0.00 0.00 4.16
2594 2819 2.034879 CCCATGAGCCACACGACAC 61.035 63.158 0.00 0.00 0.00 3.67
2595 2820 1.552799 ATCCCATGAGCCACACGACA 61.553 55.000 0.00 0.00 0.00 4.35
2596 2821 0.811616 GATCCCATGAGCCACACGAC 60.812 60.000 0.00 0.00 0.00 4.34
2597 2822 1.522092 GATCCCATGAGCCACACGA 59.478 57.895 0.00 0.00 0.00 4.35
2598 2823 1.524621 GGATCCCATGAGCCACACG 60.525 63.158 0.00 0.00 46.65 4.49
2599 2824 4.567318 GGATCCCATGAGCCACAC 57.433 61.111 0.00 0.00 46.65 3.82
2603 2828 0.321122 GATGACGGATCCCATGAGCC 60.321 60.000 6.06 0.00 43.88 4.70
2604 2829 0.683973 AGATGACGGATCCCATGAGC 59.316 55.000 6.06 0.00 0.00 4.26
2605 2830 1.001746 CCAGATGACGGATCCCATGAG 59.998 57.143 6.06 0.00 0.00 2.90
2606 2831 1.051008 CCAGATGACGGATCCCATGA 58.949 55.000 6.06 0.00 0.00 3.07
2607 2832 0.761187 ACCAGATGACGGATCCCATG 59.239 55.000 6.06 0.00 0.00 3.66
2608 2833 1.051812 GACCAGATGACGGATCCCAT 58.948 55.000 6.06 4.53 0.00 4.00
2609 2834 1.391933 CGACCAGATGACGGATCCCA 61.392 60.000 6.06 0.00 0.00 4.37
2610 2835 1.364171 CGACCAGATGACGGATCCC 59.636 63.158 6.06 0.00 0.00 3.85
2611 2836 1.300233 GCGACCAGATGACGGATCC 60.300 63.158 0.00 0.00 0.00 3.36
2612 2837 0.179111 TTGCGACCAGATGACGGATC 60.179 55.000 0.00 0.00 0.00 3.36
2613 2838 0.460284 GTTGCGACCAGATGACGGAT 60.460 55.000 0.00 0.00 0.00 4.18
2614 2839 1.080093 GTTGCGACCAGATGACGGA 60.080 57.895 0.00 0.00 0.00 4.69
2615 2840 0.948623 TTGTTGCGACCAGATGACGG 60.949 55.000 0.45 0.00 0.00 4.79
2616 2841 1.061131 GATTGTTGCGACCAGATGACG 59.939 52.381 0.45 0.00 0.00 4.35
2617 2842 1.061131 CGATTGTTGCGACCAGATGAC 59.939 52.381 0.45 0.00 0.00 3.06
2618 2843 1.358877 CGATTGTTGCGACCAGATGA 58.641 50.000 0.45 0.00 0.00 2.92
2619 2844 0.374758 CCGATTGTTGCGACCAGATG 59.625 55.000 0.45 0.00 0.00 2.90
2620 2845 0.744414 CCCGATTGTTGCGACCAGAT 60.744 55.000 0.45 0.00 0.00 2.90
2621 2846 1.375396 CCCGATTGTTGCGACCAGA 60.375 57.895 0.45 0.00 0.00 3.86
2622 2847 0.390603 TACCCGATTGTTGCGACCAG 60.391 55.000 0.45 0.00 0.00 4.00
2623 2848 0.250793 ATACCCGATTGTTGCGACCA 59.749 50.000 0.45 0.00 0.00 4.02
2624 2849 0.655733 CATACCCGATTGTTGCGACC 59.344 55.000 0.45 0.00 0.00 4.79
2625 2850 0.655733 CCATACCCGATTGTTGCGAC 59.344 55.000 0.00 0.00 0.00 5.19
2626 2851 0.462937 CCCATACCCGATTGTTGCGA 60.463 55.000 0.00 0.00 0.00 5.10
2627 2852 1.444119 CCCCATACCCGATTGTTGCG 61.444 60.000 0.00 0.00 0.00 4.85
2628 2853 1.106944 CCCCCATACCCGATTGTTGC 61.107 60.000 0.00 0.00 0.00 4.17
2629 2854 0.548989 TCCCCCATACCCGATTGTTG 59.451 55.000 0.00 0.00 0.00 3.33
2630 2855 1.300927 TTCCCCCATACCCGATTGTT 58.699 50.000 0.00 0.00 0.00 2.83
2631 2856 1.300927 TTTCCCCCATACCCGATTGT 58.699 50.000 0.00 0.00 0.00 2.71
2632 2857 2.092103 TCTTTTCCCCCATACCCGATTG 60.092 50.000 0.00 0.00 0.00 2.67
2633 2858 2.174854 CTCTTTTCCCCCATACCCGATT 59.825 50.000 0.00 0.00 0.00 3.34
2634 2859 1.774856 CTCTTTTCCCCCATACCCGAT 59.225 52.381 0.00 0.00 0.00 4.18
2635 2860 1.209621 CTCTTTTCCCCCATACCCGA 58.790 55.000 0.00 0.00 0.00 5.14
2636 2861 0.182775 CCTCTTTTCCCCCATACCCG 59.817 60.000 0.00 0.00 0.00 5.28
2637 2862 1.305886 ACCTCTTTTCCCCCATACCC 58.694 55.000 0.00 0.00 0.00 3.69
2638 2863 2.158652 GCTACCTCTTTTCCCCCATACC 60.159 54.545 0.00 0.00 0.00 2.73
2639 2864 2.508300 TGCTACCTCTTTTCCCCCATAC 59.492 50.000 0.00 0.00 0.00 2.39
2640 2865 2.853430 TGCTACCTCTTTTCCCCCATA 58.147 47.619 0.00 0.00 0.00 2.74
2641 2866 1.681229 TGCTACCTCTTTTCCCCCAT 58.319 50.000 0.00 0.00 0.00 4.00
2642 2867 1.451449 TTGCTACCTCTTTTCCCCCA 58.549 50.000 0.00 0.00 0.00 4.96
2643 2868 2.447443 CTTTGCTACCTCTTTTCCCCC 58.553 52.381 0.00 0.00 0.00 5.40
2644 2869 1.819288 GCTTTGCTACCTCTTTTCCCC 59.181 52.381 0.00 0.00 0.00 4.81
2645 2870 2.489722 CTGCTTTGCTACCTCTTTTCCC 59.510 50.000 0.00 0.00 0.00 3.97
2646 2871 2.095008 GCTGCTTTGCTACCTCTTTTCC 60.095 50.000 0.00 0.00 0.00 3.13
2647 2872 2.095008 GGCTGCTTTGCTACCTCTTTTC 60.095 50.000 0.00 0.00 0.00 2.29
2648 2873 1.889170 GGCTGCTTTGCTACCTCTTTT 59.111 47.619 0.00 0.00 0.00 2.27
2649 2874 1.202927 TGGCTGCTTTGCTACCTCTTT 60.203 47.619 0.00 0.00 0.00 2.52
2650 2875 0.401738 TGGCTGCTTTGCTACCTCTT 59.598 50.000 0.00 0.00 0.00 2.85
2651 2876 0.622665 ATGGCTGCTTTGCTACCTCT 59.377 50.000 0.00 0.00 0.00 3.69
2652 2877 0.737219 CATGGCTGCTTTGCTACCTC 59.263 55.000 0.00 0.00 0.00 3.85
2653 2878 0.329261 TCATGGCTGCTTTGCTACCT 59.671 50.000 0.00 0.00 0.00 3.08
2654 2879 0.737219 CTCATGGCTGCTTTGCTACC 59.263 55.000 0.00 0.00 0.00 3.18
2655 2880 1.457346 ACTCATGGCTGCTTTGCTAC 58.543 50.000 0.00 0.00 0.00 3.58
2656 2881 3.963733 ACTCATGGCTGCTTTGCTA 57.036 47.368 0.00 0.00 0.00 3.49
2657 2882 4.837085 ACTCATGGCTGCTTTGCT 57.163 50.000 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.