Multiple sequence alignment - TraesCS7A01G521000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G521000 chr7A 100.000 8363 0 0 1 8363 705134411 705142773 0.000000e+00 15444.0
1 TraesCS7A01G521000 chr7A 97.107 1279 35 2 5671 6949 672319580 672320856 0.000000e+00 2156.0
2 TraesCS7A01G521000 chr7A 80.319 2820 408 79 1624 4379 667481006 667478270 0.000000e+00 1997.0
3 TraesCS7A01G521000 chr7A 93.638 723 32 7 1 720 714867282 714866571 0.000000e+00 1068.0
4 TraesCS7A01G521000 chr7A 94.326 282 16 0 438 719 714867753 714868034 4.640000e-117 433.0
5 TraesCS7A01G521000 chr7A 98.148 54 1 0 6992 7045 672320962 672321015 2.490000e-15 95.3
6 TraesCS7A01G521000 chr7A 91.111 45 4 0 7722 7766 667477274 667477230 2.520000e-05 62.1
7 TraesCS7A01G521000 chr7B 93.003 5002 261 41 720 5670 704087318 704092281 0.000000e+00 7215.0
8 TraesCS7A01G521000 chr7B 92.621 5014 260 47 720 5670 704152158 704157124 0.000000e+00 7108.0
9 TraesCS7A01G521000 chr7B 78.602 2346 364 72 1445 3725 639090322 639088050 0.000000e+00 1424.0
10 TraesCS7A01G521000 chr7B 99.444 719 4 0 1 719 467066782 467067500 0.000000e+00 1306.0
11 TraesCS7A01G521000 chr7B 84.835 666 81 15 3726 4386 639087874 639087224 0.000000e+00 652.0
12 TraesCS7A01G521000 chr7B 94.550 422 14 3 7167 7583 704092271 704092688 1.970000e-180 643.0
13 TraesCS7A01G521000 chr7B 94.340 424 13 4 7167 7585 704157114 704157531 2.550000e-179 640.0
14 TraesCS7A01G521000 chr7B 82.038 579 53 23 5088 5659 639086753 639086219 5.960000e-121 446.0
15 TraesCS7A01G521000 chr7B 80.541 591 91 14 5670 6260 596682012 596682578 4.640000e-117 433.0
16 TraesCS7A01G521000 chr7B 87.634 372 37 4 7895 8260 704092921 704093289 2.790000e-114 424.0
17 TraesCS7A01G521000 chr7B 83.621 348 38 12 4532 4873 639087147 639086813 8.150000e-80 309.0
18 TraesCS7A01G521000 chr7B 91.905 210 16 1 7569 7777 704092709 704092918 8.210000e-75 292.0
19 TraesCS7A01G521000 chr7B 91.866 209 16 1 7570 7777 704157777 704157985 2.950000e-74 291.0
20 TraesCS7A01G521000 chr7B 84.112 214 32 2 6956 7167 680437930 680437717 1.100000e-48 206.0
21 TraesCS7A01G521000 chr7B 77.926 299 37 16 7874 8165 639085637 639085361 8.690000e-35 159.0
22 TraesCS7A01G521000 chr7B 86.992 123 15 1 7050 7171 710122567 710122445 4.070000e-28 137.0
23 TraesCS7A01G521000 chr7B 97.143 35 1 0 6915 6949 219726495 219726461 9.070000e-05 60.2
24 TraesCS7A01G521000 chr3A 97.492 1276 25 3 5675 6949 665979093 665980362 0.000000e+00 2172.0
25 TraesCS7A01G521000 chr3A 82.444 450 60 16 3948 4389 227918107 227918545 7.930000e-100 375.0
26 TraesCS7A01G521000 chr3A 93.607 219 10 2 6953 7167 665980448 665980666 2.910000e-84 324.0
27 TraesCS7A01G521000 chr3A 82.152 409 39 13 3538 3926 227917536 227917930 3.770000e-83 320.0
28 TraesCS7A01G521000 chr3A 82.709 347 44 10 4532 4873 227918616 227918951 2.280000e-75 294.0
29 TraesCS7A01G521000 chr3A 83.755 277 29 5 5349 5625 227919305 227919565 1.800000e-61 248.0
30 TraesCS7A01G521000 chr3A 90.566 106 10 0 7757 7862 610524706 610524811 3.150000e-29 141.0
31 TraesCS7A01G521000 chr3A 92.553 94 7 0 7769 7862 686240820 686240727 1.460000e-27 135.0
32 TraesCS7A01G521000 chr3A 85.185 135 14 3 5350 5481 14856306 14856437 5.270000e-27 134.0
33 TraesCS7A01G521000 chr3A 90.909 99 9 0 7764 7862 697472460 697472362 5.270000e-27 134.0
34 TraesCS7A01G521000 chr3A 84.270 89 14 0 5350 5438 227916230 227916318 4.160000e-13 87.9
35 TraesCS7A01G521000 chr3A 100.000 30 0 0 7737 7766 227920763 227920792 1.000000e-03 56.5
36 TraesCS7A01G521000 chr6A 96.870 1278 33 3 5672 6949 453551893 453550623 0.000000e+00 2132.0
37 TraesCS7A01G521000 chr6A 93.323 1288 69 10 5671 6946 96150017 96151299 0.000000e+00 1886.0
38 TraesCS7A01G521000 chr6A 90.997 311 26 2 410 719 124431332 124431641 1.300000e-112 418.0
39 TraesCS7A01G521000 chr6A 94.064 219 11 2 6950 7167 453550537 453550320 1.740000e-86 331.0
40 TraesCS7A01G521000 chr6A 93.458 214 12 2 6955 7167 96151373 96151585 4.870000e-82 316.0
41 TraesCS7A01G521000 chr6A 92.208 77 4 2 262 337 124430612 124430537 3.190000e-19 108.0
42 TraesCS7A01G521000 chr6A 92.105 76 4 2 263 337 582513885 582513811 1.150000e-18 106.0
43 TraesCS7A01G521000 chr7D 79.960 3029 432 92 1445 4386 576340137 576337197 0.000000e+00 2069.0
44 TraesCS7A01G521000 chr7D 81.040 596 84 17 5671 6260 540645960 540646532 1.660000e-121 448.0
45 TraesCS7A01G521000 chr7D 84.058 345 40 10 4532 4873 576337118 576336786 1.350000e-82 318.0
46 TraesCS7A01G521000 chr7D 96.407 167 5 1 260 425 457193594 457193760 2.970000e-69 274.0
47 TraesCS7A01G521000 chr7D 76.012 642 80 32 7167 7766 576336133 576335524 1.790000e-66 265.0
48 TraesCS7A01G521000 chr7D 79.070 301 36 17 7874 8165 576335519 576335237 1.850000e-41 182.0
49 TraesCS7A01G521000 chr7D 96.250 80 2 1 244 322 22671836 22671915 6.810000e-26 130.0
50 TraesCS7A01G521000 chr3B 99.306 720 5 0 1 720 133779805 133779086 0.000000e+00 1303.0
51 TraesCS7A01G521000 chr3B 93.617 282 18 0 438 719 133780274 133780555 1.000000e-113 422.0
52 TraesCS7A01G521000 chr3B 83.951 162 21 5 7009 7167 130120759 130120918 5.230000e-32 150.0
53 TraesCS7A01G521000 chr3B 88.991 109 11 1 7060 7167 735997782 735997674 5.270000e-27 134.0
54 TraesCS7A01G521000 chr3B 100.000 30 0 0 7737 7766 259373024 259372995 1.000000e-03 56.5
55 TraesCS7A01G521000 chr2A 99.305 719 5 0 1 719 676453543 676454261 0.000000e+00 1301.0
56 TraesCS7A01G521000 chr3D 83.784 999 119 24 3437 4410 181109635 181108655 0.000000e+00 907.0
57 TraesCS7A01G521000 chr3D 84.031 645 78 11 5670 6308 561096304 561096929 1.550000e-166 597.0
58 TraesCS7A01G521000 chr3D 84.393 346 40 11 4532 4873 181108584 181108249 2.250000e-85 327.0
59 TraesCS7A01G521000 chr3D 87.603 242 23 2 6 247 15263696 15263462 2.970000e-69 274.0
60 TraesCS7A01G521000 chr3D 82.310 277 26 6 5349 5625 181107811 181107558 1.410000e-52 219.0
61 TraesCS7A01G521000 chr3D 92.553 94 7 0 7769 7862 454365995 454365902 1.460000e-27 135.0
62 TraesCS7A01G521000 chr3D 81.875 160 28 1 7009 7167 24478511 24478670 5.270000e-27 134.0
63 TraesCS7A01G521000 chr3D 100.000 30 0 0 7737 7766 181106509 181106480 1.000000e-03 56.5
64 TraesCS7A01G521000 chr1D 83.256 645 83 11 5670 6308 439835677 439835052 3.390000e-158 569.0
65 TraesCS7A01G521000 chr1D 90.820 305 25 3 415 719 447451767 447451466 1.010000e-108 405.0
66 TraesCS7A01G521000 chr1D 81.884 138 22 3 7019 7154 223739462 223739598 6.860000e-21 113.0
67 TraesCS7A01G521000 chr6D 83.127 646 83 12 5669 6308 35019929 35019304 4.380000e-157 566.0
68 TraesCS7A01G521000 chr6D 90.798 163 12 3 263 425 68715338 68715497 1.830000e-51 215.0
69 TraesCS7A01G521000 chr6B 89.451 455 39 6 6495 6949 620667064 620667509 4.380000e-157 566.0
70 TraesCS7A01G521000 chr5D 90.959 365 32 1 352 716 428383581 428383944 2.710000e-134 490.0
71 TraesCS7A01G521000 chr1A 97.561 82 2 0 344 425 7330971 7331052 3.150000e-29 141.0
72 TraesCS7A01G521000 chr5B 94.444 90 5 0 7773 7862 36727553 36727642 1.130000e-28 139.0
73 TraesCS7A01G521000 chr5A 92.708 96 7 0 7767 7862 9649821 9649916 1.130000e-28 139.0
74 TraesCS7A01G521000 chr1B 92.632 95 5 1 7768 7862 413985358 413985450 1.460000e-27 135.0
75 TraesCS7A01G521000 chrUn 91.000 100 7 2 7764 7862 13409667 13409765 5.270000e-27 134.0
76 TraesCS7A01G521000 chr2B 89.524 105 10 1 7758 7862 76928544 76928441 1.890000e-26 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G521000 chr7A 705134411 705142773 8362 False 15444.000000 15444 100.000000 1 8363 1 chr7A.!!$F1 8362
1 TraesCS7A01G521000 chr7A 672319580 672321015 1435 False 1125.650000 2156 97.627500 5671 7045 2 chr7A.!!$F3 1374
2 TraesCS7A01G521000 chr7A 714866571 714867282 711 True 1068.000000 1068 93.638000 1 720 1 chr7A.!!$R1 719
3 TraesCS7A01G521000 chr7A 667477230 667481006 3776 True 1029.550000 1997 85.715000 1624 7766 2 chr7A.!!$R2 6142
4 TraesCS7A01G521000 chr7B 704152158 704157985 5827 False 2679.666667 7108 92.942333 720 7777 3 chr7B.!!$F4 7057
5 TraesCS7A01G521000 chr7B 704087318 704093289 5971 False 2143.500000 7215 91.773000 720 8260 4 chr7B.!!$F3 7540
6 TraesCS7A01G521000 chr7B 467066782 467067500 718 False 1306.000000 1306 99.444000 1 719 1 chr7B.!!$F1 718
7 TraesCS7A01G521000 chr7B 639085361 639090322 4961 True 598.000000 1424 81.404400 1445 8165 5 chr7B.!!$R4 6720
8 TraesCS7A01G521000 chr7B 596682012 596682578 566 False 433.000000 433 80.541000 5670 6260 1 chr7B.!!$F2 590
9 TraesCS7A01G521000 chr3A 665979093 665980666 1573 False 1248.000000 2172 95.549500 5675 7167 2 chr3A.!!$F4 1492
10 TraesCS7A01G521000 chr3A 227916230 227920792 4562 False 230.233333 375 85.888333 3538 7766 6 chr3A.!!$F3 4228
11 TraesCS7A01G521000 chr6A 453550320 453551893 1573 True 1231.500000 2132 95.467000 5672 7167 2 chr6A.!!$R3 1495
12 TraesCS7A01G521000 chr6A 96150017 96151585 1568 False 1101.000000 1886 93.390500 5671 7167 2 chr6A.!!$F2 1496
13 TraesCS7A01G521000 chr7D 576335237 576340137 4900 True 708.500000 2069 79.775000 1445 8165 4 chr7D.!!$R1 6720
14 TraesCS7A01G521000 chr7D 540645960 540646532 572 False 448.000000 448 81.040000 5671 6260 1 chr7D.!!$F3 589
15 TraesCS7A01G521000 chr3B 133779086 133779805 719 True 1303.000000 1303 99.306000 1 720 1 chr3B.!!$R1 719
16 TraesCS7A01G521000 chr2A 676453543 676454261 718 False 1301.000000 1301 99.305000 1 719 1 chr2A.!!$F1 718
17 TraesCS7A01G521000 chr3D 561096304 561096929 625 False 597.000000 597 84.031000 5670 6308 1 chr3D.!!$F2 638
18 TraesCS7A01G521000 chr3D 181106480 181109635 3155 True 377.375000 907 87.621750 3437 7766 4 chr3D.!!$R3 4329
19 TraesCS7A01G521000 chr1D 439835052 439835677 625 True 569.000000 569 83.256000 5670 6308 1 chr1D.!!$R1 638
20 TraesCS7A01G521000 chr6D 35019304 35019929 625 True 566.000000 566 83.127000 5669 6308 1 chr6D.!!$R1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 511 0.765519 AGGGTTAACGTGTGGGTCCT 60.766 55.000 0.00 0.00 0.00 3.85 F
1410 1417 0.099436 GTTCCGATCAGTGCCATTGC 59.901 55.000 0.00 0.00 38.26 3.56 F
1621 1650 0.319405 ATTTCTTGTTGGCTGGCTGC 59.681 50.000 7.96 7.96 41.94 5.25 F
3236 3298 0.247736 ACATCTTGTCGAGCACCCTC 59.752 55.000 0.00 0.00 34.66 4.30 F
3262 3324 0.032267 CCGGTAGCGAGAAGGGAATC 59.968 60.000 17.33 0.00 0.00 2.52 F
3416 3491 1.140852 TGGAGGATATGTTTCGGCAGG 59.859 52.381 0.00 0.00 0.00 4.85 F
4596 5066 1.601419 CTTTGGCACCCTGATGCTGG 61.601 60.000 0.00 0.00 45.38 4.85 F
5663 6311 0.244450 AGTCAAAACGGCATGCATGG 59.756 50.000 27.34 14.48 0.00 3.66 F
6647 7317 0.670546 CATGGCCGACGAACTCAAGT 60.671 55.000 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1632 1661 0.099082 GACTGTCGGACTAAGAGGCG 59.901 60.000 9.88 0.00 0.00 5.52 R
3234 3296 0.312416 CTCGCTACCGGATTGGAGAG 59.688 60.000 9.46 0.86 42.00 3.20 R
3244 3306 0.317938 CGATTCCCTTCTCGCTACCG 60.318 60.000 0.00 0.00 0.00 4.02 R
4631 5102 1.544691 TCGAACTGGCTCTCACTAACC 59.455 52.381 0.00 0.00 0.00 2.85 R
4706 5180 1.581934 CGGCGCATGAGGAAGAATTA 58.418 50.000 10.83 0.00 0.00 1.40 R
4990 5480 1.873591 ACAAACGGAACAAGCTAGCAG 59.126 47.619 18.83 11.61 0.00 4.24 R
5820 6473 1.285280 CCTGTCATTGGGACCCACTA 58.715 55.000 14.59 0.00 46.38 2.74 R
7081 7838 0.179108 TTTTCAAAAACCCACCGCCG 60.179 50.000 0.00 0.00 0.00 6.46 R
8311 10253 0.037590 CAACCCAAATCCCTCCGTCA 59.962 55.000 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
507 511 0.765519 AGGGTTAACGTGTGGGTCCT 60.766 55.000 0.00 0.00 0.00 3.85
695 699 4.900684 TCTGGACACGTTTCCATGAAATA 58.099 39.130 23.08 0.00 44.97 1.40
857 861 5.602561 ACATTACATAGCTAGTCCATCACCA 59.397 40.000 0.00 0.00 0.00 4.17
913 918 5.008613 GCTACATTCTGACAGTTGGTTTTCA 59.991 40.000 1.59 0.00 0.00 2.69
919 924 7.593875 TTCTGACAGTTGGTTTTCAATTTTG 57.406 32.000 1.59 0.00 37.73 2.44
920 925 6.696411 TCTGACAGTTGGTTTTCAATTTTGT 58.304 32.000 1.59 0.00 37.73 2.83
924 929 6.234177 ACAGTTGGTTTTCAATTTTGTTGGA 58.766 32.000 0.00 0.00 37.73 3.53
974 979 4.873746 ATGAAGACGATCATCCGGTAAT 57.126 40.909 0.00 0.00 35.07 1.89
1036 1041 2.941720 GAGACCTATGCCTCTTTGCTTG 59.058 50.000 0.00 0.00 0.00 4.01
1038 1043 3.201708 AGACCTATGCCTCTTTGCTTGAT 59.798 43.478 0.00 0.00 0.00 2.57
1102 1107 2.360191 GGCCTCTCCCATTTGCCA 59.640 61.111 0.00 0.00 41.76 4.92
1109 1114 1.076841 TCTCCCATTTGCCACCAATGA 59.923 47.619 0.00 0.00 0.00 2.57
1116 1121 4.154556 CCATTTGCCACCAATGATTTTGAC 59.845 41.667 0.00 0.00 0.00 3.18
1123 1128 4.498850 CCACCAATGATTTTGACGTTGTCA 60.499 41.667 0.00 0.00 41.09 3.58
1128 1133 7.121168 ACCAATGATTTTGACGTTGTCATAGAT 59.879 33.333 0.00 0.00 42.40 1.98
1139 1144 3.198409 TGTCATAGATGGCGATGCTTT 57.802 42.857 0.00 0.00 34.48 3.51
1164 1169 5.065731 GTCCAGAAAGTAAGGCATTCATCAG 59.934 44.000 0.00 0.00 0.00 2.90
1201 1206 3.160269 CATTTCTCACCAGGGAAAGCTT 58.840 45.455 0.00 0.00 35.37 3.74
1212 1217 4.397417 CCAGGGAAAGCTTATCTGTTCTTG 59.603 45.833 16.96 1.96 0.00 3.02
1218 1223 3.779759 AGCTTATCTGTTCTTGAGCTCG 58.220 45.455 9.64 0.00 35.74 5.03
1224 1229 2.159503 TCTGTTCTTGAGCTCGTCGATC 60.160 50.000 9.64 5.24 0.00 3.69
1225 1230 1.813178 TGTTCTTGAGCTCGTCGATCT 59.187 47.619 9.64 0.00 0.00 2.75
1226 1231 2.159503 TGTTCTTGAGCTCGTCGATCTC 60.160 50.000 17.17 17.17 0.00 2.75
1227 1232 2.031258 TCTTGAGCTCGTCGATCTCT 57.969 50.000 22.61 9.06 0.00 3.10
1228 1233 2.360844 TCTTGAGCTCGTCGATCTCTT 58.639 47.619 22.61 0.00 0.00 2.85
1229 1234 3.532542 TCTTGAGCTCGTCGATCTCTTA 58.467 45.455 22.61 12.32 0.00 2.10
1230 1235 4.130857 TCTTGAGCTCGTCGATCTCTTAT 58.869 43.478 22.61 0.00 0.00 1.73
1236 1241 4.819630 AGCTCGTCGATCTCTTATTCTCTT 59.180 41.667 0.00 0.00 0.00 2.85
1243 1248 6.814146 GTCGATCTCTTATTCTCTTGTTGGTT 59.186 38.462 0.00 0.00 0.00 3.67
1255 1260 1.710816 TGTTGGTTGGGGGAATTGTC 58.289 50.000 0.00 0.00 0.00 3.18
1321 1328 2.360475 GGCAGTCCAGGACCAAGC 60.360 66.667 16.72 16.95 32.18 4.01
1341 1348 5.499139 AGCGACAAGAAAAGAATGAAACA 57.501 34.783 0.00 0.00 0.00 2.83
1350 1357 2.957402 AGAATGAAACAGGCAGGACA 57.043 45.000 0.00 0.00 0.00 4.02
1351 1358 2.787994 AGAATGAAACAGGCAGGACAG 58.212 47.619 0.00 0.00 0.00 3.51
1352 1359 2.373169 AGAATGAAACAGGCAGGACAGA 59.627 45.455 0.00 0.00 0.00 3.41
1353 1360 2.486472 ATGAAACAGGCAGGACAGAG 57.514 50.000 0.00 0.00 0.00 3.35
1361 1368 0.538287 GGCAGGACAGAGCAAAAGGT 60.538 55.000 0.00 0.00 0.00 3.50
1375 1382 4.706962 AGCAAAAGGTTCAAGGTGGATATC 59.293 41.667 0.00 0.00 0.00 1.63
1410 1417 0.099436 GTTCCGATCAGTGCCATTGC 59.901 55.000 0.00 0.00 38.26 3.56
1413 1420 1.452651 CGATCAGTGCCATTGCCCT 60.453 57.895 0.00 0.00 36.33 5.19
1414 1421 1.442526 CGATCAGTGCCATTGCCCTC 61.443 60.000 0.00 0.00 36.33 4.30
1435 1442 2.429930 CTTGGTGGCGGTCAGGAA 59.570 61.111 0.00 0.00 0.00 3.36
1436 1443 1.002134 CTTGGTGGCGGTCAGGAAT 60.002 57.895 0.00 0.00 0.00 3.01
1453 1460 2.481104 GGAATCTGAGAACTCGCAGGAG 60.481 54.545 10.09 0.00 42.81 3.69
1533 1541 9.227490 TGTTGTGTTTATTTATGAACAACTTCG 57.773 29.630 15.14 0.00 44.73 3.79
1577 1587 6.036470 TGCAAACTCTATGATTAGTCACTCG 58.964 40.000 0.00 0.00 37.14 4.18
1578 1588 6.037098 GCAAACTCTATGATTAGTCACTCGT 58.963 40.000 0.00 0.00 37.14 4.18
1579 1589 6.531948 GCAAACTCTATGATTAGTCACTCGTT 59.468 38.462 0.00 0.00 37.14 3.85
1580 1590 7.253817 GCAAACTCTATGATTAGTCACTCGTTC 60.254 40.741 0.00 0.00 37.14 3.95
1616 1626 7.615582 TTATACTCAGATTTCTTGTTGGCTG 57.384 36.000 0.00 0.00 0.00 4.85
1621 1650 0.319405 ATTTCTTGTTGGCTGGCTGC 59.681 50.000 7.96 7.96 41.94 5.25
1622 1651 1.042003 TTTCTTGTTGGCTGGCTGCA 61.042 50.000 18.32 1.75 45.15 4.41
1632 1661 1.734137 CTGGCTGCATGCAGGAATC 59.266 57.895 40.59 26.92 45.15 2.52
1677 1706 2.028876 TCCGTAGAGATTCCGATTGCA 58.971 47.619 0.00 0.00 0.00 4.08
1700 1729 1.071814 GTTGGGTGGCGGTGTTCTA 59.928 57.895 0.00 0.00 0.00 2.10
1725 1754 4.365514 TGTCAGGGTTTTCATTCTAGCA 57.634 40.909 0.00 0.00 0.00 3.49
1758 1787 5.598417 ACTCAAAGTGGGCTTTTACTCAATT 59.402 36.000 0.00 0.00 42.54 2.32
1759 1788 5.841810 TCAAAGTGGGCTTTTACTCAATTG 58.158 37.500 0.00 0.00 42.54 2.32
1778 1807 8.902540 TCAATTGTGGTATGTTTATAGCCTAG 57.097 34.615 5.13 0.00 36.64 3.02
1798 1827 2.507471 AGCTAGAGGCCTAATTTGCACT 59.493 45.455 4.42 0.00 43.05 4.40
1801 1830 3.567478 AGAGGCCTAATTTGCACTAGG 57.433 47.619 4.42 10.21 38.20 3.02
1805 1834 2.354821 GGCCTAATTTGCACTAGGTTCG 59.645 50.000 14.30 0.00 37.58 3.95
1814 1843 4.010667 TGCACTAGGTTCGTGGTAAAAT 57.989 40.909 0.00 0.00 33.10 1.82
1853 1898 8.474831 CATTGATGGTGCATGATATATGGATTT 58.525 33.333 0.00 0.00 0.00 2.17
1872 1917 9.685828 ATGGATTTTTGAATTTTTGCAGATTTG 57.314 25.926 0.00 0.00 0.00 2.32
1881 1926 2.363306 TTGCAGATTTGTCCACCACT 57.637 45.000 0.00 0.00 0.00 4.00
1910 1955 1.598701 GAACCTGGGCCTGTGATTGC 61.599 60.000 4.53 0.00 0.00 3.56
1911 1956 2.036098 CCTGGGCCTGTGATTGCA 59.964 61.111 4.53 0.00 0.00 4.08
1969 2014 1.892474 GCATTGACTGGGGCAAAGTAA 59.108 47.619 0.00 0.00 0.00 2.24
2027 2072 8.156165 TCTTAGCCCATCAAAAATTGTTCATTT 58.844 29.630 0.00 0.00 36.57 2.32
2218 2264 5.934921 TGATTTGAATCATGATATGCGAGC 58.065 37.500 9.04 0.00 40.32 5.03
2311 2357 1.039856 AGCAAAAAGATGGCAACGGT 58.960 45.000 0.00 0.00 42.51 4.83
2483 2529 8.463930 TGTTTTGAATCAGTCTTTTGGTAGAT 57.536 30.769 0.00 0.00 0.00 1.98
2491 2538 9.606631 AATCAGTCTTTTGGTAGATATGTCTTC 57.393 33.333 0.00 0.00 35.87 2.87
2520 2567 2.733026 GTGTGCTCATTTCCATGTTTGC 59.267 45.455 0.00 0.00 0.00 3.68
2652 2699 6.642131 GTCGAAGTTGTATGGTGTAAGTTACA 59.358 38.462 11.75 11.75 36.08 2.41
2698 2746 2.030096 TGCGGTAGATACGTTCACAACA 60.030 45.455 0.00 0.00 0.00 3.33
2801 2849 3.280197 TGATTCCGAGCCAATGATGAA 57.720 42.857 0.00 0.00 0.00 2.57
3031 3085 7.566658 AATGGGAGGTGGAATTTCAATAAAA 57.433 32.000 0.00 0.00 0.00 1.52
3033 3087 7.566658 TGGGAGGTGGAATTTCAATAAAAAT 57.433 32.000 0.00 0.00 0.00 1.82
3042 3096 9.504708 TGGAATTTCAATAAAAATGTGAGCAAT 57.495 25.926 0.00 0.00 0.00 3.56
3043 3097 9.977762 GGAATTTCAATAAAAATGTGAGCAATC 57.022 29.630 0.00 0.00 0.00 2.67
3046 3100 8.451687 TTTCAATAAAAATGTGAGCAATCGAG 57.548 30.769 0.00 0.00 0.00 4.04
3052 3106 1.939974 TGTGAGCAATCGAGCATACC 58.060 50.000 0.00 0.00 36.85 2.73
3053 3107 1.482182 TGTGAGCAATCGAGCATACCT 59.518 47.619 0.00 0.00 36.85 3.08
3054 3108 1.863454 GTGAGCAATCGAGCATACCTG 59.137 52.381 0.00 0.00 36.85 4.00
3055 3109 1.482182 TGAGCAATCGAGCATACCTGT 59.518 47.619 0.00 0.00 36.85 4.00
3056 3110 2.093500 TGAGCAATCGAGCATACCTGTT 60.093 45.455 0.00 0.00 36.85 3.16
3066 3120 5.105513 TCGAGCATACCTGTTCTGTTGATTA 60.106 40.000 0.00 0.00 30.98 1.75
3097 3151 3.003275 ACATGTGCACCGTAAACTCTTTG 59.997 43.478 15.69 0.00 0.00 2.77
3124 3186 1.734707 CGTCGATGCGGTAACTTTCCT 60.735 52.381 0.00 0.00 0.00 3.36
3125 3187 1.659098 GTCGATGCGGTAACTTTCCTG 59.341 52.381 0.00 0.00 0.00 3.86
3130 3192 1.141254 TGCGGTAACTTTCCTGGTTCA 59.859 47.619 0.00 0.00 0.00 3.18
3146 3208 5.302823 CCTGGTTCAATTCTTCAGAGGTTTT 59.697 40.000 0.00 0.00 0.00 2.43
3165 3227 4.832590 TTTTTCGGCCGATTGACTTTAA 57.167 36.364 31.56 15.02 0.00 1.52
3171 3233 3.062234 CGGCCGATTGACTTTAAGAAGAC 59.938 47.826 24.07 0.00 36.69 3.01
3173 3235 4.254492 GCCGATTGACTTTAAGAAGACCT 58.746 43.478 0.00 0.00 36.69 3.85
3174 3236 4.093556 GCCGATTGACTTTAAGAAGACCTG 59.906 45.833 0.00 0.00 36.69 4.00
3175 3237 4.631813 CCGATTGACTTTAAGAAGACCTGG 59.368 45.833 0.00 0.00 36.69 4.45
3176 3238 4.093556 CGATTGACTTTAAGAAGACCTGGC 59.906 45.833 0.00 0.00 36.69 4.85
3177 3239 3.418684 TGACTTTAAGAAGACCTGGCC 57.581 47.619 0.00 0.00 36.69 5.36
3178 3240 2.708861 TGACTTTAAGAAGACCTGGCCA 59.291 45.455 4.71 4.71 36.69 5.36
3191 3253 1.228831 TGGCCATGGGGAGTTGTTG 60.229 57.895 15.13 0.00 35.59 3.33
3218 3280 3.302555 TCTACACGACGTGATGTTGAAC 58.697 45.455 33.12 0.00 36.96 3.18
3231 3293 2.832563 TGTTGAACATCTTGTCGAGCA 58.167 42.857 0.00 0.00 0.00 4.26
3234 3296 1.079503 GAACATCTTGTCGAGCACCC 58.920 55.000 0.00 0.00 0.00 4.61
3236 3298 0.247736 ACATCTTGTCGAGCACCCTC 59.752 55.000 0.00 0.00 34.66 4.30
3244 3306 1.144936 CGAGCACCCTCTCCAATCC 59.855 63.158 0.00 0.00 35.90 3.01
3248 3310 1.335132 GCACCCTCTCCAATCCGGTA 61.335 60.000 0.00 0.00 35.57 4.02
3249 3311 0.753262 CACCCTCTCCAATCCGGTAG 59.247 60.000 0.00 0.00 35.57 3.18
3251 3313 1.364171 CCTCTCCAATCCGGTAGCG 59.636 63.158 7.49 7.49 35.57 4.26
3262 3324 0.032267 CCGGTAGCGAGAAGGGAATC 59.968 60.000 17.33 0.00 0.00 2.52
3283 3347 2.476619 CGTAAGTTCACTGCTTCACCTG 59.523 50.000 0.00 0.00 0.00 4.00
3286 3350 4.623932 AAGTTCACTGCTTCACCTGATA 57.376 40.909 0.00 0.00 0.00 2.15
3290 3354 4.824479 TCACTGCTTCACCTGATATTGA 57.176 40.909 0.00 0.00 0.00 2.57
3307 3382 8.125978 TGATATTGAGCCTTTTCAAATGTCTT 57.874 30.769 0.00 0.00 40.21 3.01
3309 3384 9.727627 GATATTGAGCCTTTTCAAATGTCTTAG 57.272 33.333 0.00 0.00 40.21 2.18
3327 3402 4.456911 TCTTAGCCAGTTTGATTTGCAGAG 59.543 41.667 0.00 0.00 0.00 3.35
3328 3403 2.590821 AGCCAGTTTGATTTGCAGAGT 58.409 42.857 0.00 0.00 0.00 3.24
3334 3409 5.163683 CCAGTTTGATTTGCAGAGTATGGAG 60.164 44.000 0.00 0.00 0.00 3.86
3360 3435 4.881019 ATAGCGCTGTAATTCAGGAGAT 57.119 40.909 22.90 0.00 43.78 2.75
3411 3486 3.560636 AAGGGTGGAGGATATGTTTCG 57.439 47.619 0.00 0.00 0.00 3.46
3416 3491 1.140852 TGGAGGATATGTTTCGGCAGG 59.859 52.381 0.00 0.00 0.00 4.85
3421 3496 5.048846 AGGATATGTTTCGGCAGGTAAAT 57.951 39.130 0.00 0.00 0.00 1.40
3423 3498 6.779860 AGGATATGTTTCGGCAGGTAAATAT 58.220 36.000 0.00 0.00 0.00 1.28
3426 3501 5.941948 ATGTTTCGGCAGGTAAATATAGC 57.058 39.130 0.00 0.00 0.00 2.97
3461 3539 4.713792 AATCCAGAGTTTCTCCTGTGTT 57.286 40.909 0.00 0.00 0.00 3.32
3494 3572 8.996651 TGAGAAGAACTCTGACATATATGGTA 57.003 34.615 16.96 4.58 45.13 3.25
3503 3581 5.718607 TCTGACATATATGGTATGCTCTGCT 59.281 40.000 16.96 0.00 0.00 4.24
3504 3582 6.891908 TCTGACATATATGGTATGCTCTGCTA 59.108 38.462 16.96 0.00 0.00 3.49
3505 3583 7.397192 TCTGACATATATGGTATGCTCTGCTAA 59.603 37.037 16.96 0.00 0.00 3.09
3506 3584 7.323420 TGACATATATGGTATGCTCTGCTAAC 58.677 38.462 16.96 0.00 0.00 2.34
3509 3587 7.179160 ACATATATGGTATGCTCTGCTAACTCA 59.821 37.037 16.96 0.00 0.00 3.41
3510 3588 3.808466 TGGTATGCTCTGCTAACTCAG 57.192 47.619 0.00 0.00 35.46 3.35
3524 3602 4.330347 GCTAACTCAGCCTTGTAAGTAAGC 59.670 45.833 0.00 0.00 45.23 3.09
3525 3603 4.625607 AACTCAGCCTTGTAAGTAAGCT 57.374 40.909 0.00 0.00 0.00 3.74
3527 3605 4.570930 ACTCAGCCTTGTAAGTAAGCTTC 58.429 43.478 0.00 0.00 36.22 3.86
3529 3607 5.165961 TCAGCCTTGTAAGTAAGCTTCAT 57.834 39.130 0.00 0.00 36.22 2.57
3530 3608 5.560724 TCAGCCTTGTAAGTAAGCTTCATT 58.439 37.500 0.00 1.29 36.22 2.57
3531 3609 6.707290 TCAGCCTTGTAAGTAAGCTTCATTA 58.293 36.000 0.00 0.18 36.22 1.90
3533 3611 7.280876 TCAGCCTTGTAAGTAAGCTTCATTATG 59.719 37.037 0.00 0.00 36.22 1.90
3534 3612 6.038714 AGCCTTGTAAGTAAGCTTCATTATGC 59.961 38.462 0.00 5.91 36.22 3.14
3537 3615 8.125448 CCTTGTAAGTAAGCTTCATTATGCTTC 58.875 37.037 0.00 0.00 45.09 3.86
3539 3617 9.884636 TTGTAAGTAAGCTTCATTATGCTTCTA 57.115 29.630 0.00 0.00 45.09 2.10
3554 3638 2.009774 CTTCTACCTGCCATCCAAACG 58.990 52.381 0.00 0.00 0.00 3.60
3797 4070 2.336341 CAAACAGCTTGGCGGGTTA 58.664 52.632 0.00 0.00 31.01 2.85
3826 4099 5.878406 TTGCTGAAAAAGGAAATAACCCA 57.122 34.783 0.00 0.00 32.57 4.51
3934 4217 5.276868 CGGTTGCTGCAGTAAGTAACATATC 60.277 44.000 18.15 2.62 42.54 1.63
4028 4473 3.535561 CGATAATTTGCTGACTCACCCT 58.464 45.455 0.00 0.00 0.00 4.34
4283 4733 2.586425 TCTTCTTTTTGCTCACTGGGG 58.414 47.619 0.00 0.00 0.00 4.96
4389 4841 3.054361 GTTGTCCTCCTGGGATAATGTGT 60.054 47.826 0.00 0.00 44.86 3.72
4503 4972 3.576078 AATTGTGTGTTGTCCCTCAGA 57.424 42.857 0.00 0.00 0.00 3.27
4529 4998 6.828785 ACACTCCCCACATTTTATTCATAGTC 59.171 38.462 0.00 0.00 0.00 2.59
4568 5038 7.040617 ACTGACTCTAATACTTGACGTCTTCAA 60.041 37.037 17.92 2.33 42.26 2.69
4596 5066 1.601419 CTTTGGCACCCTGATGCTGG 61.601 60.000 0.00 0.00 45.38 4.85
4631 5102 5.940617 TGTTGTCTTGATATTAGGGATGGG 58.059 41.667 0.00 0.00 0.00 4.00
4706 5180 7.805163 TCATGGAGGTAACATAAATGACATCT 58.195 34.615 0.00 0.00 41.41 2.90
4990 5480 1.887707 GGACGGCAATCATCGGGAC 60.888 63.158 0.00 0.00 0.00 4.46
4993 5483 2.537560 CGGCAATCATCGGGACTGC 61.538 63.158 3.38 3.38 0.00 4.40
4997 5487 1.506493 CAATCATCGGGACTGCTAGC 58.494 55.000 8.10 8.10 0.00 3.42
5598 6241 3.181471 CCACAGCCATCTCAGTAGGTAAG 60.181 52.174 0.00 0.00 0.00 2.34
5659 6307 3.119849 ACTTATCAGTCAAAACGGCATGC 60.120 43.478 9.90 9.90 0.00 4.06
5660 6308 1.246649 ATCAGTCAAAACGGCATGCA 58.753 45.000 21.36 0.00 0.00 3.96
5661 6309 1.246649 TCAGTCAAAACGGCATGCAT 58.753 45.000 21.36 3.56 0.00 3.96
5662 6310 1.068402 TCAGTCAAAACGGCATGCATG 60.068 47.619 22.70 22.70 0.00 4.06
5663 6311 0.244450 AGTCAAAACGGCATGCATGG 59.756 50.000 27.34 14.48 0.00 3.66
5820 6473 6.825721 AGAGTTGTTTGAGTGAAAATCTGACT 59.174 34.615 0.00 0.00 0.00 3.41
6390 7060 4.742649 TGAGCTCCGCCTCCTCGT 62.743 66.667 12.15 0.00 0.00 4.18
6549 7219 1.153765 CCGCATCGAAGTGAGCTGA 60.154 57.895 2.18 0.00 0.00 4.26
6588 7258 0.741326 TCTCTGCTCTATTTCGCGCT 59.259 50.000 5.56 0.00 0.00 5.92
6647 7317 0.670546 CATGGCCGACGAACTCAAGT 60.671 55.000 0.00 0.00 0.00 3.16
6676 7346 1.757699 CTTCCCTGCCTAGTCCTGTAC 59.242 57.143 0.00 0.00 0.00 2.90
7081 7838 5.957796 CGTTTCTGAAAACTGTCAGTACAAC 59.042 40.000 5.77 2.86 44.56 3.32
7135 7895 3.964031 TGCTGGTTTTGTGAATTAGGGTT 59.036 39.130 0.00 0.00 0.00 4.11
7198 7960 4.644234 TCATCTGATTTTCGCTCTCTCTCT 59.356 41.667 0.00 0.00 0.00 3.10
7199 7961 4.630894 TCTGATTTTCGCTCTCTCTCTC 57.369 45.455 0.00 0.00 0.00 3.20
7429 8194 7.944729 ACTTTATCAAATGCTACATGGAACT 57.055 32.000 0.00 0.00 0.00 3.01
7431 8196 7.611467 ACTTTATCAAATGCTACATGGAACTGA 59.389 33.333 0.00 0.00 0.00 3.41
7432 8197 7.936496 TTATCAAATGCTACATGGAACTGAA 57.064 32.000 0.00 0.00 0.00 3.02
7433 8198 8.523915 TTATCAAATGCTACATGGAACTGAAT 57.476 30.769 0.00 0.00 0.00 2.57
7435 8200 5.125900 TCAAATGCTACATGGAACTGAATGG 59.874 40.000 0.00 0.00 0.00 3.16
7436 8201 2.368439 TGCTACATGGAACTGAATGGC 58.632 47.619 0.00 0.00 0.00 4.40
7534 8480 2.897271 TTGGAGCTCCTTGGCAATAA 57.103 45.000 32.28 13.69 36.82 1.40
7535 8481 3.386932 TTGGAGCTCCTTGGCAATAAT 57.613 42.857 32.28 0.00 36.82 1.28
7536 8482 4.518278 TTGGAGCTCCTTGGCAATAATA 57.482 40.909 32.28 5.57 36.82 0.98
7537 8483 4.729552 TGGAGCTCCTTGGCAATAATAT 57.270 40.909 32.28 0.00 36.82 1.28
7613 8821 1.935933 ACGTATTCGGGATGTCAAGC 58.064 50.000 0.00 0.00 41.85 4.01
7615 8823 1.860950 CGTATTCGGGATGTCAAGCTG 59.139 52.381 0.00 0.00 0.00 4.24
7639 9128 9.878599 CTGATAAATGTCCAACGGTTTATAATC 57.121 33.333 0.00 0.00 28.44 1.75
7729 9220 1.067354 CAAGGAAAGGCATGGCTGTTC 60.067 52.381 24.08 23.80 0.00 3.18
7780 9715 8.662781 TGTAGTGAAATGAAATATGCTACTCC 57.337 34.615 0.00 0.00 0.00 3.85
7781 9716 7.715249 TGTAGTGAAATGAAATATGCTACTCCC 59.285 37.037 0.00 0.00 0.00 4.30
7782 9717 6.904626 AGTGAAATGAAATATGCTACTCCCT 58.095 36.000 0.00 0.00 0.00 4.20
7783 9718 6.995091 AGTGAAATGAAATATGCTACTCCCTC 59.005 38.462 0.00 0.00 0.00 4.30
7784 9719 6.205658 GTGAAATGAAATATGCTACTCCCTCC 59.794 42.308 0.00 0.00 0.00 4.30
7785 9720 4.543590 ATGAAATATGCTACTCCCTCCG 57.456 45.455 0.00 0.00 0.00 4.63
7786 9721 3.305720 TGAAATATGCTACTCCCTCCGT 58.694 45.455 0.00 0.00 0.00 4.69
7787 9722 3.709653 TGAAATATGCTACTCCCTCCGTT 59.290 43.478 0.00 0.00 0.00 4.44
7788 9723 4.202223 TGAAATATGCTACTCCCTCCGTTC 60.202 45.833 0.00 0.00 0.00 3.95
7789 9724 2.447408 TATGCTACTCCCTCCGTTCA 57.553 50.000 0.00 0.00 0.00 3.18
7790 9725 0.824759 ATGCTACTCCCTCCGTTCAC 59.175 55.000 0.00 0.00 0.00 3.18
7791 9726 0.251653 TGCTACTCCCTCCGTTCACT 60.252 55.000 0.00 0.00 0.00 3.41
7792 9727 0.896226 GCTACTCCCTCCGTTCACTT 59.104 55.000 0.00 0.00 0.00 3.16
7793 9728 1.275573 GCTACTCCCTCCGTTCACTTT 59.724 52.381 0.00 0.00 0.00 2.66
7794 9729 2.289506 GCTACTCCCTCCGTTCACTTTT 60.290 50.000 0.00 0.00 0.00 2.27
7795 9730 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
7796 9731 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
7797 9732 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
7798 9733 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
7799 9734 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
7800 9735 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
7801 9736 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
7802 9737 3.497262 CCTCCGTTCACTTTTGTAAGTCC 59.503 47.826 0.00 0.00 42.67 3.85
7803 9738 4.377897 CTCCGTTCACTTTTGTAAGTCCT 58.622 43.478 0.00 0.00 42.67 3.85
7804 9739 4.773013 TCCGTTCACTTTTGTAAGTCCTT 58.227 39.130 0.00 0.00 42.67 3.36
7805 9740 5.187687 TCCGTTCACTTTTGTAAGTCCTTT 58.812 37.500 0.00 0.00 42.67 3.11
7806 9741 5.295045 TCCGTTCACTTTTGTAAGTCCTTTC 59.705 40.000 0.00 0.00 42.67 2.62
7807 9742 5.065474 CCGTTCACTTTTGTAAGTCCTTTCA 59.935 40.000 0.00 0.00 42.67 2.69
7808 9743 6.403855 CCGTTCACTTTTGTAAGTCCTTTCAA 60.404 38.462 0.00 0.00 42.67 2.69
7809 9744 7.024768 CGTTCACTTTTGTAAGTCCTTTCAAA 58.975 34.615 7.48 7.48 42.67 2.69
7810 9745 7.007995 CGTTCACTTTTGTAAGTCCTTTCAAAC 59.992 37.037 10.23 1.02 42.67 2.93
7811 9746 7.455641 TCACTTTTGTAAGTCCTTTCAAACA 57.544 32.000 10.23 0.00 42.67 2.83
7812 9747 7.887381 TCACTTTTGTAAGTCCTTTCAAACAA 58.113 30.769 10.23 1.42 42.67 2.83
7813 9748 7.810759 TCACTTTTGTAAGTCCTTTCAAACAAC 59.189 33.333 10.23 0.00 42.67 3.32
7814 9749 7.812669 CACTTTTGTAAGTCCTTTCAAACAACT 59.187 33.333 10.23 0.00 42.67 3.16
7815 9750 8.027189 ACTTTTGTAAGTCCTTTCAAACAACTC 58.973 33.333 10.23 0.00 40.60 3.01
7816 9751 7.455641 TTTGTAAGTCCTTTCAAACAACTCA 57.544 32.000 7.48 0.00 35.77 3.41
7817 9752 7.455641 TTGTAAGTCCTTTCAAACAACTCAA 57.544 32.000 0.00 0.00 29.09 3.02
7818 9753 7.639113 TGTAAGTCCTTTCAAACAACTCAAT 57.361 32.000 0.00 0.00 0.00 2.57
7819 9754 8.740123 TGTAAGTCCTTTCAAACAACTCAATA 57.260 30.769 0.00 0.00 0.00 1.90
7820 9755 9.349713 TGTAAGTCCTTTCAAACAACTCAATAT 57.650 29.630 0.00 0.00 0.00 1.28
7823 9758 9.793259 AAGTCCTTTCAAACAACTCAATATAGA 57.207 29.630 0.00 0.00 0.00 1.98
7824 9759 9.965902 AGTCCTTTCAAACAACTCAATATAGAT 57.034 29.630 0.00 0.00 0.00 1.98
7833 9768 9.979578 AAACAACTCAATATAGATTGTTTTGCA 57.020 25.926 18.24 0.00 46.15 4.08
7834 9769 8.970691 ACAACTCAATATAGATTGTTTTGCAC 57.029 30.769 18.24 0.00 42.71 4.57
7835 9770 8.575589 ACAACTCAATATAGATTGTTTTGCACA 58.424 29.630 18.24 0.00 42.71 4.57
7836 9771 9.577110 CAACTCAATATAGATTGTTTTGCACAT 57.423 29.630 9.77 0.00 42.71 3.21
7838 9773 9.577110 ACTCAATATAGATTGTTTTGCACATTG 57.423 29.630 9.77 0.00 42.71 2.82
7839 9774 9.577110 CTCAATATAGATTGTTTTGCACATTGT 57.423 29.630 9.77 0.00 42.71 2.71
7840 9775 9.571810 TCAATATAGATTGTTTTGCACATTGTC 57.428 29.630 9.77 0.00 42.71 3.18
7841 9776 9.577110 CAATATAGATTGTTTTGCACATTGTCT 57.423 29.630 1.78 0.00 38.13 3.41
7842 9777 9.577110 AATATAGATTGTTTTGCACATTGTCTG 57.423 29.630 0.00 0.00 34.43 3.51
7843 9778 5.518848 AGATTGTTTTGCACATTGTCTGA 57.481 34.783 0.00 0.00 34.43 3.27
7844 9779 5.904941 AGATTGTTTTGCACATTGTCTGAA 58.095 33.333 0.00 0.00 34.43 3.02
7845 9780 6.339730 AGATTGTTTTGCACATTGTCTGAAA 58.660 32.000 0.00 0.00 34.43 2.69
7846 9781 6.987992 AGATTGTTTTGCACATTGTCTGAAAT 59.012 30.769 0.00 0.00 34.43 2.17
7847 9782 5.970140 TGTTTTGCACATTGTCTGAAATG 57.030 34.783 0.00 9.50 42.21 2.32
7849 9784 5.519566 TGTTTTGCACATTGTCTGAAATGTC 59.480 36.000 12.25 9.51 45.47 3.06
7850 9785 5.518848 TTTGCACATTGTCTGAAATGTCT 57.481 34.783 12.25 0.00 45.47 3.41
7851 9786 5.518848 TTGCACATTGTCTGAAATGTCTT 57.481 34.783 12.25 0.00 45.47 3.01
7852 9787 5.112220 TGCACATTGTCTGAAATGTCTTC 57.888 39.130 12.25 7.82 45.47 2.87
7853 9788 4.579753 TGCACATTGTCTGAAATGTCTTCA 59.420 37.500 12.25 9.40 45.47 3.02
7854 9789 5.067544 TGCACATTGTCTGAAATGTCTTCAA 59.932 36.000 12.25 0.00 45.47 2.69
7855 9790 5.628193 GCACATTGTCTGAAATGTCTTCAAG 59.372 40.000 12.25 5.42 45.47 3.02
7856 9791 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
7857 9792 5.829924 ACATTGTCTGAAATGTCTTCAAGGT 59.170 36.000 10.41 0.00 45.47 3.50
7858 9793 6.016777 ACATTGTCTGAAATGTCTTCAAGGTC 60.017 38.462 10.41 0.00 45.47 3.85
7859 9794 5.296151 TGTCTGAAATGTCTTCAAGGTCT 57.704 39.130 0.00 0.00 0.00 3.85
7860 9795 5.684704 TGTCTGAAATGTCTTCAAGGTCTT 58.315 37.500 0.00 0.00 0.00 3.01
7861 9796 6.826668 TGTCTGAAATGTCTTCAAGGTCTTA 58.173 36.000 0.00 0.00 0.00 2.10
7862 9797 7.279615 TGTCTGAAATGTCTTCAAGGTCTTAA 58.720 34.615 0.00 0.00 0.00 1.85
7863 9798 7.773224 TGTCTGAAATGTCTTCAAGGTCTTAAA 59.227 33.333 0.00 0.00 0.00 1.52
7864 9799 8.070769 GTCTGAAATGTCTTCAAGGTCTTAAAC 58.929 37.037 0.00 0.00 0.00 2.01
7865 9800 7.773224 TCTGAAATGTCTTCAAGGTCTTAAACA 59.227 33.333 0.00 0.00 0.00 2.83
7866 9801 7.930217 TGAAATGTCTTCAAGGTCTTAAACAG 58.070 34.615 0.00 0.00 0.00 3.16
7867 9802 7.773224 TGAAATGTCTTCAAGGTCTTAAACAGA 59.227 33.333 0.00 0.00 0.00 3.41
7868 9803 7.736447 AATGTCTTCAAGGTCTTAAACAGAG 57.264 36.000 0.00 0.00 29.34 3.35
7869 9804 5.611374 TGTCTTCAAGGTCTTAAACAGAGG 58.389 41.667 0.00 0.00 29.34 3.69
7870 9805 4.998033 GTCTTCAAGGTCTTAAACAGAGGG 59.002 45.833 0.00 0.00 29.34 4.30
7871 9806 4.905456 TCTTCAAGGTCTTAAACAGAGGGA 59.095 41.667 0.00 0.00 29.34 4.20
7872 9807 4.891992 TCAAGGTCTTAAACAGAGGGAG 57.108 45.455 0.00 0.00 29.34 4.30
7873 9808 4.232091 TCAAGGTCTTAAACAGAGGGAGT 58.768 43.478 0.00 0.00 29.34 3.85
7874 9809 5.399991 TCAAGGTCTTAAACAGAGGGAGTA 58.600 41.667 0.00 0.00 29.34 2.59
7875 9810 5.842328 TCAAGGTCTTAAACAGAGGGAGTAA 59.158 40.000 0.00 0.00 29.34 2.24
7876 9811 6.500751 TCAAGGTCTTAAACAGAGGGAGTAAT 59.499 38.462 0.00 0.00 29.34 1.89
7877 9812 7.676893 TCAAGGTCTTAAACAGAGGGAGTAATA 59.323 37.037 0.00 0.00 29.34 0.98
7878 9813 8.487028 CAAGGTCTTAAACAGAGGGAGTAATAT 58.513 37.037 0.00 0.00 29.34 1.28
7879 9814 9.725206 AAGGTCTTAAACAGAGGGAGTAATATA 57.275 33.333 0.00 0.00 29.34 0.86
7880 9815 9.369672 AGGTCTTAAACAGAGGGAGTAATATAG 57.630 37.037 0.00 0.00 29.34 1.31
7881 9816 8.586744 GGTCTTAAACAGAGGGAGTAATATAGG 58.413 40.741 0.00 0.00 29.34 2.57
7882 9817 9.145442 GTCTTAAACAGAGGGAGTAATATAGGT 57.855 37.037 0.00 0.00 29.34 3.08
7883 9818 9.144298 TCTTAAACAGAGGGAGTAATATAGGTG 57.856 37.037 0.00 0.00 0.00 4.00
7888 9823 6.555360 ACAGAGGGAGTAATATAGGTGGAAAG 59.445 42.308 0.00 0.00 0.00 2.62
7972 9907 4.744795 AGGTAACCACAAAAATGCAACA 57.255 36.364 0.00 0.00 37.17 3.33
8040 9975 7.765307 TGCAATCAAGAAGTAATTTCCAGATC 58.235 34.615 0.00 0.00 36.40 2.75
8096 10038 6.169094 TCAGTGCAAAATAAAGGAGAGAGAG 58.831 40.000 0.00 0.00 0.00 3.20
8173 10115 4.202461 TGACTCCAATTTACACCTGAAGCT 60.202 41.667 0.00 0.00 0.00 3.74
8179 10121 2.561478 TTACACCTGAAGCTCAACCC 57.439 50.000 0.00 0.00 0.00 4.11
8222 10164 1.947678 GCCGATGGCCATTAGATCTGG 60.948 57.143 21.84 13.61 44.06 3.86
8241 10183 2.677875 GCCTTTGACCTGCCCCTG 60.678 66.667 0.00 0.00 0.00 4.45
8251 10193 3.316573 CTGCCCCTGTCGGAGTTCC 62.317 68.421 0.00 0.00 0.00 3.62
8260 10202 1.275291 TGTCGGAGTTCCACTTGGATC 59.725 52.381 0.00 0.00 44.98 3.36
8261 10203 1.550976 GTCGGAGTTCCACTTGGATCT 59.449 52.381 8.35 8.35 44.98 2.75
8262 10204 1.550524 TCGGAGTTCCACTTGGATCTG 59.449 52.381 12.69 7.33 44.98 2.90
8263 10205 1.406069 CGGAGTTCCACTTGGATCTGG 60.406 57.143 12.69 2.62 44.98 3.86
8264 10206 1.680249 GGAGTTCCACTTGGATCTGGC 60.680 57.143 12.69 1.20 44.98 4.85
8265 10207 0.329596 AGTTCCACTTGGATCTGGCC 59.670 55.000 7.88 0.00 44.98 5.36
8266 10208 0.038166 GTTCCACTTGGATCTGGCCA 59.962 55.000 4.71 4.71 44.98 5.36
8267 10209 0.038166 TTCCACTTGGATCTGGCCAC 59.962 55.000 0.00 0.00 44.98 5.01
8268 10210 1.746615 CCACTTGGATCTGGCCACG 60.747 63.158 0.00 0.00 37.75 4.94
8269 10211 1.746615 CACTTGGATCTGGCCACGG 60.747 63.158 0.00 0.00 37.75 4.94
8270 10212 2.124570 CTTGGATCTGGCCACGGG 60.125 66.667 0.00 0.00 37.75 5.28
8271 10213 3.704231 CTTGGATCTGGCCACGGGG 62.704 68.421 0.00 0.00 37.75 5.73
8287 10229 4.695560 GGGACCTGTGTAGTGTGC 57.304 61.111 0.00 0.00 0.00 4.57
8288 10230 2.058675 GGGACCTGTGTAGTGTGCT 58.941 57.895 0.00 0.00 0.00 4.40
8289 10231 0.396811 GGGACCTGTGTAGTGTGCTT 59.603 55.000 0.00 0.00 0.00 3.91
8290 10232 1.512926 GGACCTGTGTAGTGTGCTTG 58.487 55.000 0.00 0.00 0.00 4.01
8291 10233 1.202651 GGACCTGTGTAGTGTGCTTGT 60.203 52.381 0.00 0.00 0.00 3.16
8292 10234 2.135933 GACCTGTGTAGTGTGCTTGTC 58.864 52.381 0.00 0.00 0.00 3.18
8293 10235 1.762957 ACCTGTGTAGTGTGCTTGTCT 59.237 47.619 0.00 0.00 0.00 3.41
8294 10236 2.224066 ACCTGTGTAGTGTGCTTGTCTC 60.224 50.000 0.00 0.00 0.00 3.36
8295 10237 2.054363 CTGTGTAGTGTGCTTGTCTCG 58.946 52.381 0.00 0.00 0.00 4.04
8296 10238 1.269569 TGTGTAGTGTGCTTGTCTCGG 60.270 52.381 0.00 0.00 0.00 4.63
8297 10239 0.319555 TGTAGTGTGCTTGTCTCGGC 60.320 55.000 0.00 0.00 0.00 5.54
8298 10240 1.014564 GTAGTGTGCTTGTCTCGGCC 61.015 60.000 0.00 0.00 0.00 6.13
8299 10241 2.486636 TAGTGTGCTTGTCTCGGCCG 62.487 60.000 22.12 22.12 0.00 6.13
8300 10242 3.923864 TGTGCTTGTCTCGGCCGT 61.924 61.111 27.15 0.00 0.00 5.68
8301 10243 3.414700 GTGCTTGTCTCGGCCGTG 61.415 66.667 27.15 23.87 0.00 4.94
8302 10244 4.680237 TGCTTGTCTCGGCCGTGG 62.680 66.667 27.15 19.03 0.00 4.94
8319 10261 3.590824 GGCACCAATTGACGGAGG 58.409 61.111 7.12 0.00 0.00 4.30
8320 10262 2.046285 GGCACCAATTGACGGAGGG 61.046 63.158 7.12 0.00 0.00 4.30
8321 10263 1.002624 GCACCAATTGACGGAGGGA 60.003 57.895 7.12 0.00 0.00 4.20
8322 10264 0.394352 GCACCAATTGACGGAGGGAT 60.394 55.000 7.12 0.00 0.00 3.85
8323 10265 1.955208 GCACCAATTGACGGAGGGATT 60.955 52.381 7.12 0.00 0.00 3.01
8324 10266 2.446435 CACCAATTGACGGAGGGATTT 58.554 47.619 7.12 0.00 0.00 2.17
8325 10267 2.164219 CACCAATTGACGGAGGGATTTG 59.836 50.000 7.12 0.00 0.00 2.32
8326 10268 1.750778 CCAATTGACGGAGGGATTTGG 59.249 52.381 7.12 0.00 0.00 3.28
8327 10269 1.750778 CAATTGACGGAGGGATTTGGG 59.249 52.381 0.00 0.00 0.00 4.12
8328 10270 0.999712 ATTGACGGAGGGATTTGGGT 59.000 50.000 0.00 0.00 0.00 4.51
8329 10271 0.774908 TTGACGGAGGGATTTGGGTT 59.225 50.000 0.00 0.00 0.00 4.11
8330 10272 0.037590 TGACGGAGGGATTTGGGTTG 59.962 55.000 0.00 0.00 0.00 3.77
8331 10273 1.304134 ACGGAGGGATTTGGGTTGC 60.304 57.895 0.00 0.00 0.00 4.17
8332 10274 2.406616 CGGAGGGATTTGGGTTGCG 61.407 63.158 0.00 0.00 0.00 4.85
8333 10275 2.052104 GGAGGGATTTGGGTTGCGG 61.052 63.158 0.00 0.00 0.00 5.69
8334 10276 1.001393 GAGGGATTTGGGTTGCGGA 60.001 57.895 0.00 0.00 0.00 5.54
8335 10277 1.000896 AGGGATTTGGGTTGCGGAG 60.001 57.895 0.00 0.00 0.00 4.63
8336 10278 1.304134 GGGATTTGGGTTGCGGAGT 60.304 57.895 0.00 0.00 0.00 3.85
8337 10279 1.595093 GGGATTTGGGTTGCGGAGTG 61.595 60.000 0.00 0.00 0.00 3.51
8338 10280 0.893727 GGATTTGGGTTGCGGAGTGT 60.894 55.000 0.00 0.00 0.00 3.55
8339 10281 0.240945 GATTTGGGTTGCGGAGTGTG 59.759 55.000 0.00 0.00 0.00 3.82
8340 10282 1.178534 ATTTGGGTTGCGGAGTGTGG 61.179 55.000 0.00 0.00 0.00 4.17
8341 10283 2.559922 TTTGGGTTGCGGAGTGTGGT 62.560 55.000 0.00 0.00 0.00 4.16
8342 10284 1.697082 TTGGGTTGCGGAGTGTGGTA 61.697 55.000 0.00 0.00 0.00 3.25
8343 10285 1.375523 GGGTTGCGGAGTGTGGTAG 60.376 63.158 0.00 0.00 0.00 3.18
8344 10286 1.669440 GGTTGCGGAGTGTGGTAGA 59.331 57.895 0.00 0.00 0.00 2.59
8345 10287 0.389948 GGTTGCGGAGTGTGGTAGAG 60.390 60.000 0.00 0.00 0.00 2.43
8346 10288 0.317479 GTTGCGGAGTGTGGTAGAGT 59.683 55.000 0.00 0.00 0.00 3.24
8347 10289 1.045407 TTGCGGAGTGTGGTAGAGTT 58.955 50.000 0.00 0.00 0.00 3.01
8348 10290 0.317160 TGCGGAGTGTGGTAGAGTTG 59.683 55.000 0.00 0.00 0.00 3.16
8349 10291 1.014564 GCGGAGTGTGGTAGAGTTGC 61.015 60.000 0.00 0.00 0.00 4.17
8350 10292 0.317160 CGGAGTGTGGTAGAGTTGCA 59.683 55.000 0.00 0.00 0.00 4.08
8351 10293 1.797025 GGAGTGTGGTAGAGTTGCAC 58.203 55.000 0.00 0.00 0.00 4.57
8352 10294 1.608283 GGAGTGTGGTAGAGTTGCACC 60.608 57.143 0.00 0.00 35.24 5.01
8353 10295 1.070134 GAGTGTGGTAGAGTTGCACCA 59.930 52.381 0.00 0.00 42.54 4.17
8354 10296 1.070758 AGTGTGGTAGAGTTGCACCAG 59.929 52.381 0.00 0.00 45.31 4.00
8355 10297 1.128200 TGTGGTAGAGTTGCACCAGT 58.872 50.000 0.00 0.00 45.31 4.00
8356 10298 1.070134 TGTGGTAGAGTTGCACCAGTC 59.930 52.381 0.00 0.00 45.31 3.51
8357 10299 0.317160 TGGTAGAGTTGCACCAGTCG 59.683 55.000 0.00 0.00 39.91 4.18
8358 10300 0.389948 GGTAGAGTTGCACCAGTCGG 60.390 60.000 0.00 0.00 34.77 4.79
8359 10301 0.389948 GTAGAGTTGCACCAGTCGGG 60.390 60.000 0.00 0.00 44.81 5.14
8360 10302 2.167398 TAGAGTTGCACCAGTCGGGC 62.167 60.000 0.00 0.00 42.05 6.13
8361 10303 3.537206 GAGTTGCACCAGTCGGGCT 62.537 63.158 0.00 0.00 42.05 5.19
8362 10304 3.357079 GTTGCACCAGTCGGGCTG 61.357 66.667 1.75 1.75 44.63 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 124 0.036671 TCGTGGAGTCGTAGCAGAGA 60.037 55.000 0.00 0.00 0.00 3.10
695 699 9.020731 CCAGAGTATTTAACCAAAAACTACCAT 57.979 33.333 0.00 0.00 0.00 3.55
732 736 2.683362 TCGTGAGTAGCTGTATGGTCTG 59.317 50.000 0.00 0.00 0.00 3.51
897 902 6.966435 ACAAAATTGAAAACCAACTGTCAG 57.034 33.333 0.00 0.00 37.63 3.51
913 918 4.033587 CGGTCGATACGATCCAACAAAATT 59.966 41.667 6.63 0.00 38.42 1.82
919 924 0.248743 TGCGGTCGATACGATCCAAC 60.249 55.000 15.32 0.00 38.42 3.77
920 925 0.030235 CTGCGGTCGATACGATCCAA 59.970 55.000 15.32 0.00 38.42 3.53
924 929 1.359117 CACCTGCGGTCGATACGAT 59.641 57.895 15.32 0.00 38.42 3.73
974 979 0.975556 TCTGCATACTCCTTGCCCGA 60.976 55.000 0.00 0.00 39.39 5.14
978 983 2.421424 CACCTTTCTGCATACTCCTTGC 59.579 50.000 0.00 0.00 40.55 4.01
1102 1107 4.909696 TGACAACGTCAAAATCATTGGT 57.090 36.364 0.00 0.00 39.78 3.67
1109 1114 4.201812 CGCCATCTATGACAACGTCAAAAT 60.202 41.667 0.22 0.00 45.96 1.82
1116 1121 1.193203 GCATCGCCATCTATGACAACG 59.807 52.381 0.00 0.00 0.00 4.10
1123 1128 2.158769 TGGACAAAGCATCGCCATCTAT 60.159 45.455 0.00 0.00 0.00 1.98
1128 1133 0.250684 TTCTGGACAAAGCATCGCCA 60.251 50.000 0.00 0.00 0.00 5.69
1139 1144 4.365514 TGAATGCCTTACTTTCTGGACA 57.634 40.909 0.00 0.00 34.37 4.02
1164 1169 2.077687 AATGGGTGATGGATTGGAGC 57.922 50.000 0.00 0.00 0.00 4.70
1201 1206 3.007635 TCGACGAGCTCAAGAACAGATA 58.992 45.455 15.40 0.00 0.00 1.98
1212 1217 4.451096 AGAGAATAAGAGATCGACGAGCTC 59.549 45.833 30.50 30.50 44.32 4.09
1218 1223 6.334202 ACCAACAAGAGAATAAGAGATCGAC 58.666 40.000 0.00 0.00 0.00 4.20
1224 1229 4.702131 CCCCAACCAACAAGAGAATAAGAG 59.298 45.833 0.00 0.00 0.00 2.85
1225 1230 4.508405 CCCCCAACCAACAAGAGAATAAGA 60.508 45.833 0.00 0.00 0.00 2.10
1226 1231 3.763897 CCCCCAACCAACAAGAGAATAAG 59.236 47.826 0.00 0.00 0.00 1.73
1227 1232 3.399644 TCCCCCAACCAACAAGAGAATAA 59.600 43.478 0.00 0.00 0.00 1.40
1228 1233 2.990284 TCCCCCAACCAACAAGAGAATA 59.010 45.455 0.00 0.00 0.00 1.75
1229 1234 1.786441 TCCCCCAACCAACAAGAGAAT 59.214 47.619 0.00 0.00 0.00 2.40
1230 1235 1.227249 TCCCCCAACCAACAAGAGAA 58.773 50.000 0.00 0.00 0.00 2.87
1236 1241 1.219213 AGACAATTCCCCCAACCAACA 59.781 47.619 0.00 0.00 0.00 3.33
1243 1248 0.413037 ATGGCAAGACAATTCCCCCA 59.587 50.000 0.00 0.00 0.00 4.96
1255 1260 1.838112 TCCTGCAGGTAAATGGCAAG 58.162 50.000 31.58 2.09 37.06 4.01
1294 1301 2.191641 GGACTGCCATCTGCTCCC 59.808 66.667 0.00 0.00 42.00 4.30
1299 1306 1.222936 GGTCCTGGACTGCCATCTG 59.777 63.158 25.01 0.00 44.91 2.90
1309 1316 1.118965 TCTTGTCGCTTGGTCCTGGA 61.119 55.000 0.00 0.00 0.00 3.86
1315 1322 3.882888 TCATTCTTTTCTTGTCGCTTGGT 59.117 39.130 0.00 0.00 0.00 3.67
1321 1328 4.676924 GCCTGTTTCATTCTTTTCTTGTCG 59.323 41.667 0.00 0.00 0.00 4.35
1341 1348 0.251077 CCTTTTGCTCTGTCCTGCCT 60.251 55.000 0.00 0.00 0.00 4.75
1350 1357 2.091885 TCCACCTTGAACCTTTTGCTCT 60.092 45.455 0.00 0.00 0.00 4.09
1351 1358 2.306847 TCCACCTTGAACCTTTTGCTC 58.693 47.619 0.00 0.00 0.00 4.26
1352 1359 2.452600 TCCACCTTGAACCTTTTGCT 57.547 45.000 0.00 0.00 0.00 3.91
1353 1360 4.462483 TGATATCCACCTTGAACCTTTTGC 59.538 41.667 0.00 0.00 0.00 3.68
1410 1417 4.760047 CGCCACCAAGGACGAGGG 62.760 72.222 0.00 0.00 41.22 4.30
1413 1420 3.998672 GACCGCCACCAAGGACGA 61.999 66.667 0.00 0.00 41.22 4.20
1414 1421 4.308458 TGACCGCCACCAAGGACG 62.308 66.667 0.00 0.00 41.22 4.79
1426 1433 2.478709 CGAGTTCTCAGATTCCTGACCG 60.479 54.545 0.79 0.00 44.01 4.79
1435 1442 1.110442 CCTCCTGCGAGTTCTCAGAT 58.890 55.000 0.86 0.00 33.93 2.90
1436 1443 0.251386 ACCTCCTGCGAGTTCTCAGA 60.251 55.000 0.86 0.00 33.93 3.27
1453 1460 2.249844 TGTCAAGAACCCGAAGAACC 57.750 50.000 0.00 0.00 0.00 3.62
1597 1607 2.094854 GCCAGCCAACAAGAAATCTGAG 60.095 50.000 0.00 0.00 0.00 3.35
1598 1608 1.888512 GCCAGCCAACAAGAAATCTGA 59.111 47.619 0.00 0.00 0.00 3.27
1599 1609 1.891150 AGCCAGCCAACAAGAAATCTG 59.109 47.619 0.00 0.00 0.00 2.90
1601 1611 1.670967 GCAGCCAGCCAACAAGAAATC 60.671 52.381 0.00 0.00 37.23 2.17
1602 1612 0.319405 GCAGCCAGCCAACAAGAAAT 59.681 50.000 0.00 0.00 37.23 2.17
1603 1613 1.042003 TGCAGCCAGCCAACAAGAAA 61.042 50.000 0.00 0.00 44.83 2.52
1604 1614 0.828762 ATGCAGCCAGCCAACAAGAA 60.829 50.000 0.00 0.00 44.83 2.52
1606 1616 1.080093 CATGCAGCCAGCCAACAAG 60.080 57.895 0.00 0.00 44.83 3.16
1607 1617 3.052954 CATGCAGCCAGCCAACAA 58.947 55.556 0.00 0.00 44.83 2.83
1608 1618 3.687102 GCATGCAGCCAGCCAACA 61.687 61.111 14.21 0.00 44.83 3.33
1609 1619 3.642778 CTGCATGCAGCCAGCCAAC 62.643 63.158 33.18 0.00 44.83 3.77
1613 1623 2.351336 GATTCCTGCATGCAGCCAGC 62.351 60.000 37.11 25.21 44.83 4.85
1616 1626 2.719979 CGATTCCTGCATGCAGCC 59.280 61.111 37.11 24.02 44.83 4.85
1632 1661 0.099082 GACTGTCGGACTAAGAGGCG 59.901 60.000 9.88 0.00 0.00 5.52
1675 1704 2.568090 CGCCACCCAACTTGATGC 59.432 61.111 0.00 0.00 0.00 3.91
1677 1706 1.603455 CACCGCCACCCAACTTGAT 60.603 57.895 0.00 0.00 0.00 2.57
1700 1729 4.184649 AGAATGAAAACCCTGACAACCT 57.815 40.909 0.00 0.00 0.00 3.50
1758 1787 7.008332 TCTAGCTAGGCTATAAACATACCACA 58.992 38.462 20.58 0.00 40.54 4.17
1759 1788 7.363094 CCTCTAGCTAGGCTATAAACATACCAC 60.363 44.444 20.58 0.00 40.54 4.16
1778 1807 2.924421 AGTGCAAATTAGGCCTCTAGC 58.076 47.619 9.68 8.70 42.60 3.42
1827 1856 7.582667 ATCCATATATCATGCACCATCAATG 57.417 36.000 0.00 0.00 0.00 2.82
1833 1862 7.836479 TCAAAAATCCATATATCATGCACCA 57.164 32.000 0.00 0.00 0.00 4.17
1848 1893 9.172820 GACAAATCTGCAAAAATTCAAAAATCC 57.827 29.630 0.00 0.00 0.00 3.01
1853 1898 6.038050 GGTGGACAAATCTGCAAAAATTCAAA 59.962 34.615 0.00 0.00 0.00 2.69
1881 1926 1.209621 GCCCAGGTTCCACTACCATA 58.790 55.000 0.00 0.00 40.82 2.74
2003 2048 8.156165 AGAAATGAACAATTTTTGATGGGCTAA 58.844 29.630 0.00 0.00 38.64 3.09
2020 2065 8.021396 GGGAAACATTGTAGTGTAGAAATGAAC 58.979 37.037 0.00 0.00 34.75 3.18
2021 2066 7.942341 AGGGAAACATTGTAGTGTAGAAATGAA 59.058 33.333 0.00 0.00 34.75 2.57
2027 2072 4.286032 AGCAGGGAAACATTGTAGTGTAGA 59.714 41.667 0.00 0.00 0.00 2.59
2311 2357 7.898014 ATCATAGACAGTTACATCCACAGTA 57.102 36.000 0.00 0.00 0.00 2.74
2520 2567 0.889186 ACTAGGCGGCAAACCTGTTG 60.889 55.000 13.08 0.00 38.26 3.33
2652 2699 5.957771 TTAGCTGAATTCAGGGTATCAGT 57.042 39.130 31.41 7.16 43.94 3.41
2698 2746 7.979444 TGTCTTTTCGATGTTTTTAGGAGAT 57.021 32.000 0.00 0.00 0.00 2.75
2750 2798 3.554960 GGCACGCAACTCCTATCATGATA 60.555 47.826 14.64 14.64 0.00 2.15
2757 2805 3.275617 TTATTGGCACGCAACTCCTAT 57.724 42.857 0.00 0.00 0.00 2.57
2801 2849 4.292186 ACTATTGATATGCCGCATTCCT 57.708 40.909 11.97 0.00 0.00 3.36
2927 2981 1.001181 GATGCAAAGCAGAAAAGGGCA 59.999 47.619 0.00 0.00 43.65 5.36
3021 3075 7.062138 GCTCGATTGCTCACATTTTTATTGAAA 59.938 33.333 0.00 0.00 0.00 2.69
3031 3085 2.874701 GGTATGCTCGATTGCTCACATT 59.125 45.455 0.00 0.00 0.00 2.71
3033 3087 1.482182 AGGTATGCTCGATTGCTCACA 59.518 47.619 0.00 0.00 0.00 3.58
3042 3096 2.560981 TCAACAGAACAGGTATGCTCGA 59.439 45.455 0.00 0.00 0.00 4.04
3043 3097 2.959516 TCAACAGAACAGGTATGCTCG 58.040 47.619 0.00 0.00 0.00 5.03
3046 3100 7.145932 AGTTTAATCAACAGAACAGGTATGC 57.854 36.000 0.00 0.00 37.93 3.14
3052 3106 6.038161 TGTGTGGAGTTTAATCAACAGAACAG 59.962 38.462 0.00 0.00 33.75 3.16
3053 3107 5.883115 TGTGTGGAGTTTAATCAACAGAACA 59.117 36.000 0.00 0.00 33.75 3.18
3054 3108 6.371809 TGTGTGGAGTTTAATCAACAGAAC 57.628 37.500 0.00 0.00 33.75 3.01
3055 3109 6.545666 ACATGTGTGGAGTTTAATCAACAGAA 59.454 34.615 0.00 0.00 33.75 3.02
3056 3110 6.017192 CACATGTGTGGAGTTTAATCAACAGA 60.017 38.462 18.03 0.00 42.10 3.41
3066 3120 1.032014 GGTGCACATGTGTGGAGTTT 58.968 50.000 26.01 0.00 46.84 2.66
3119 3181 5.072741 CCTCTGAAGAATTGAACCAGGAAA 58.927 41.667 0.00 0.00 0.00 3.13
3124 3186 6.790232 AAAAACCTCTGAAGAATTGAACCA 57.210 33.333 0.00 0.00 0.00 3.67
3146 3208 3.666274 TCTTAAAGTCAATCGGCCGAAA 58.334 40.909 34.66 18.02 0.00 3.46
3150 3212 3.374367 GGTCTTCTTAAAGTCAATCGGCC 59.626 47.826 0.00 0.00 33.95 6.13
3160 3222 3.019564 CCATGGCCAGGTCTTCTTAAAG 58.980 50.000 17.55 0.00 0.00 1.85
3165 3227 2.311854 CCCCATGGCCAGGTCTTCT 61.312 63.158 17.55 0.00 0.00 2.85
3171 3233 2.043652 CAACTCCCCATGGCCAGG 60.044 66.667 13.05 12.17 0.00 4.45
3173 3235 1.228831 CAACAACTCCCCATGGCCA 60.229 57.895 8.56 8.56 0.00 5.36
3174 3236 0.324645 ATCAACAACTCCCCATGGCC 60.325 55.000 6.09 0.00 0.00 5.36
3175 3237 1.560505 AATCAACAACTCCCCATGGC 58.439 50.000 6.09 0.00 0.00 4.40
3176 3238 4.284234 AGAAAAATCAACAACTCCCCATGG 59.716 41.667 4.14 4.14 0.00 3.66
3177 3239 5.473066 AGAAAAATCAACAACTCCCCATG 57.527 39.130 0.00 0.00 0.00 3.66
3178 3240 6.015434 GTGTAGAAAAATCAACAACTCCCCAT 60.015 38.462 0.00 0.00 0.00 4.00
3191 3253 5.511088 ACATCACGTCGTGTAGAAAAATC 57.489 39.130 23.82 0.00 34.79 2.17
3218 3280 0.534412 AGAGGGTGCTCGACAAGATG 59.466 55.000 0.00 0.00 0.00 2.90
3227 3289 1.144936 CGGATTGGAGAGGGTGCTC 59.855 63.158 0.00 0.00 0.00 4.26
3228 3290 2.370445 CCGGATTGGAGAGGGTGCT 61.370 63.158 0.00 0.00 42.00 4.40
3231 3293 1.049289 GCTACCGGATTGGAGAGGGT 61.049 60.000 9.46 0.00 42.00 4.34
3234 3296 0.312416 CTCGCTACCGGATTGGAGAG 59.688 60.000 9.46 0.86 42.00 3.20
3236 3298 0.744874 TTCTCGCTACCGGATTGGAG 59.255 55.000 9.46 9.74 42.00 3.86
3244 3306 0.317938 CGATTCCCTTCTCGCTACCG 60.318 60.000 0.00 0.00 0.00 4.02
3248 3310 2.100989 ACTTACGATTCCCTTCTCGCT 58.899 47.619 0.00 0.00 38.42 4.93
3249 3311 2.580966 ACTTACGATTCCCTTCTCGC 57.419 50.000 0.00 0.00 38.42 5.03
3251 3313 4.865365 CAGTGAACTTACGATTCCCTTCTC 59.135 45.833 0.00 0.00 0.00 2.87
3262 3324 2.476619 CAGGTGAAGCAGTGAACTTACG 59.523 50.000 0.00 0.00 0.00 3.18
3283 3347 9.727627 CTAAGACATTTGAAAAGGCTCAATATC 57.272 33.333 0.00 0.00 35.31 1.63
3286 3350 6.393171 GCTAAGACATTTGAAAAGGCTCAAT 58.607 36.000 0.00 0.00 35.31 2.57
3290 3354 4.151883 TGGCTAAGACATTTGAAAAGGCT 58.848 39.130 1.33 0.00 0.00 4.58
3307 3382 3.754965 ACTCTGCAAATCAAACTGGCTA 58.245 40.909 0.00 0.00 0.00 3.93
3309 3384 4.418392 CATACTCTGCAAATCAAACTGGC 58.582 43.478 0.00 0.00 0.00 4.85
3327 3402 8.480643 AATTACAGCGCTATATTTCTCCATAC 57.519 34.615 10.99 0.00 0.00 2.39
3328 3403 8.311109 TGAATTACAGCGCTATATTTCTCCATA 58.689 33.333 23.34 7.30 0.00 2.74
3334 3409 6.868864 TCTCCTGAATTACAGCGCTATATTTC 59.131 38.462 18.73 18.73 44.52 2.17
3360 3435 8.190122 CCGGAGATTGATGTTTCATTTTATGAA 58.810 33.333 0.00 0.00 46.77 2.57
3377 3452 1.067635 CACCCTTTTTGCCGGAGATTG 60.068 52.381 5.05 0.00 0.00 2.67
3411 3486 4.575885 TCCGAATGCTATATTTACCTGCC 58.424 43.478 0.00 0.00 0.00 4.85
3421 3496 7.180229 TCTGGATTATTTCCTCCGAATGCTATA 59.820 37.037 0.00 0.00 45.68 1.31
3423 3498 5.306937 TCTGGATTATTTCCTCCGAATGCTA 59.693 40.000 0.00 0.00 45.68 3.49
3426 3501 5.615289 ACTCTGGATTATTTCCTCCGAATG 58.385 41.667 0.00 0.00 45.68 2.67
3503 3581 5.740290 AGCTTACTTACAAGGCTGAGTTA 57.260 39.130 0.00 0.00 31.68 2.24
3504 3582 4.625607 AGCTTACTTACAAGGCTGAGTT 57.374 40.909 0.00 0.00 31.68 3.01
3505 3583 4.040461 TGAAGCTTACTTACAAGGCTGAGT 59.960 41.667 0.00 0.00 35.82 3.41
3506 3584 4.569943 TGAAGCTTACTTACAAGGCTGAG 58.430 43.478 0.00 0.00 35.82 3.35
3509 3587 6.038714 GCATAATGAAGCTTACTTACAAGGCT 59.961 38.462 0.00 0.00 35.82 4.58
3510 3588 6.038714 AGCATAATGAAGCTTACTTACAAGGC 59.961 38.462 0.00 3.69 38.01 4.35
3522 3600 4.133078 GCAGGTAGAAGCATAATGAAGCT 58.867 43.478 0.00 0.00 44.31 3.74
3523 3601 3.251972 GGCAGGTAGAAGCATAATGAAGC 59.748 47.826 0.00 0.00 0.00 3.86
3524 3602 4.454678 TGGCAGGTAGAAGCATAATGAAG 58.545 43.478 0.00 0.00 0.00 3.02
3525 3603 4.502105 TGGCAGGTAGAAGCATAATGAA 57.498 40.909 0.00 0.00 0.00 2.57
3527 3605 3.755378 GGATGGCAGGTAGAAGCATAATG 59.245 47.826 0.00 0.00 0.00 1.90
3529 3607 2.777114 TGGATGGCAGGTAGAAGCATAA 59.223 45.455 0.00 0.00 0.00 1.90
3530 3608 2.407562 TGGATGGCAGGTAGAAGCATA 58.592 47.619 0.00 0.00 0.00 3.14
3531 3609 1.216064 TGGATGGCAGGTAGAAGCAT 58.784 50.000 0.00 0.00 0.00 3.79
3533 3611 1.745653 GTTTGGATGGCAGGTAGAAGC 59.254 52.381 0.00 0.00 0.00 3.86
3534 3612 2.009774 CGTTTGGATGGCAGGTAGAAG 58.990 52.381 0.00 0.00 0.00 2.85
3537 3615 1.821216 AACGTTTGGATGGCAGGTAG 58.179 50.000 0.00 0.00 0.00 3.18
3539 3617 0.958822 GAAACGTTTGGATGGCAGGT 59.041 50.000 20.10 0.00 0.00 4.00
3554 3638 6.127897 CCATGGTCCTGATAAGAACAAGAAAC 60.128 42.308 2.57 0.00 33.91 2.78
3768 4038 1.708341 AGCTGTTTGGCAGGACAAAT 58.292 45.000 3.26 0.00 45.14 2.32
3826 4099 1.749063 TCGACACGTGAGGAATAGCAT 59.251 47.619 25.01 0.00 0.00 3.79
3934 4217 5.192327 AGGAAACTGAAAACAGAAGCATG 57.808 39.130 0.00 0.00 41.13 4.06
4028 4473 6.316513 ACCTAGGTAAAAGCCAAAAATACCA 58.683 36.000 14.41 0.00 38.76 3.25
4185 4635 6.989169 ACTTATCTAAAACCTATGCAGCAGAG 59.011 38.462 10.30 10.30 0.00 3.35
4283 4733 9.614792 AACTAGTGAATCCCTGAAATGTTATAC 57.385 33.333 0.00 0.00 0.00 1.47
4335 4787 4.552166 ATGATAATTTGTTCCGGCTTCG 57.448 40.909 0.00 0.00 0.00 3.79
4389 4841 3.659786 ACACTATCAGTTAGCGTTTGCA 58.340 40.909 0.00 0.00 46.23 4.08
4503 4972 7.182060 ACTATGAATAAAATGTGGGGAGTGTT 58.818 34.615 0.00 0.00 0.00 3.32
4568 5038 4.993028 TCAGGGTGCCAAAGTAAACTTAT 58.007 39.130 0.00 0.00 34.61 1.73
4596 5066 5.751243 TCAAGACAACAAAACTCCTTAGC 57.249 39.130 0.00 0.00 0.00 3.09
4631 5102 1.544691 TCGAACTGGCTCTCACTAACC 59.455 52.381 0.00 0.00 0.00 2.85
4706 5180 1.581934 CGGCGCATGAGGAAGAATTA 58.418 50.000 10.83 0.00 0.00 1.40
4990 5480 1.873591 ACAAACGGAACAAGCTAGCAG 59.126 47.619 18.83 11.61 0.00 4.24
4993 5483 6.345565 GCGTATATACAAACGGAACAAGCTAG 60.346 42.308 13.22 0.00 39.46 3.42
4997 5487 5.705813 TGCGTATATACAAACGGAACAAG 57.294 39.130 13.22 0.00 36.48 3.16
5659 6307 3.313249 TGCAATTTACTCGATCAGCCATG 59.687 43.478 0.00 0.00 0.00 3.66
5660 6308 3.544684 TGCAATTTACTCGATCAGCCAT 58.455 40.909 0.00 0.00 0.00 4.40
5661 6309 2.984562 TGCAATTTACTCGATCAGCCA 58.015 42.857 0.00 0.00 0.00 4.75
5662 6310 4.355543 TTTGCAATTTACTCGATCAGCC 57.644 40.909 0.00 0.00 0.00 4.85
5820 6473 1.285280 CCTGTCATTGGGACCCACTA 58.715 55.000 14.59 0.00 46.38 2.74
5876 6529 1.796459 GAGCGAAACTTTCTAACGGCA 59.204 47.619 0.12 0.00 0.00 5.69
6390 7060 1.530655 TCGGCGAGGGATATCAGCA 60.531 57.895 4.99 0.00 0.00 4.41
6588 7258 3.012119 TTGGGGGATGGCGCTACA 61.012 61.111 7.64 0.00 0.00 2.74
6647 7317 2.656069 GGCAGGGAAGCACGACCTA 61.656 63.158 0.00 0.00 35.83 3.08
6676 7346 1.886313 CCTGCGCATGCTACTGGAG 60.886 63.158 21.55 14.09 43.34 3.86
6711 7381 3.031736 CGAAGAGGTTCTCAGGGGAATA 58.968 50.000 0.00 0.00 32.06 1.75
6799 7469 1.534476 TGTTCCTGTACGGGCCTCA 60.534 57.895 16.58 11.34 0.00 3.86
6804 7474 1.218316 GCTCCTGTTCCTGTACGGG 59.782 63.158 15.21 15.21 44.49 5.28
7081 7838 0.179108 TTTTCAAAAACCCACCGCCG 60.179 50.000 0.00 0.00 0.00 6.46
7112 7872 4.159557 ACCCTAATTCACAAAACCAGCAT 58.840 39.130 0.00 0.00 0.00 3.79
7115 7875 5.134202 GGAACCCTAATTCACAAAACCAG 57.866 43.478 0.00 0.00 0.00 4.00
7198 7960 3.070159 GCATAGTAGATGGGAGCAACTGA 59.930 47.826 0.00 0.00 0.00 3.41
7199 7961 3.181462 TGCATAGTAGATGGGAGCAACTG 60.181 47.826 0.00 0.00 0.00 3.16
7239 8001 1.391157 GCTTGGTGAACTTGGCCACA 61.391 55.000 3.88 0.00 35.13 4.17
7321 8083 0.896923 GCCACATTGGGATGCAGAAA 59.103 50.000 0.00 0.00 38.19 2.52
7322 8084 0.251698 TGCCACATTGGGATGCAGAA 60.252 50.000 0.00 0.00 38.19 3.02
7429 8194 2.611225 AAAACCAAAAGCGCCATTCA 57.389 40.000 2.29 0.00 0.00 2.57
7431 8196 2.037121 AGCTAAAACCAAAAGCGCCATT 59.963 40.909 2.29 0.00 41.19 3.16
7432 8197 1.618343 AGCTAAAACCAAAAGCGCCAT 59.382 42.857 2.29 0.00 41.19 4.40
7433 8198 1.036707 AGCTAAAACCAAAAGCGCCA 58.963 45.000 2.29 0.00 41.19 5.69
7435 8200 0.784178 GCAGCTAAAACCAAAAGCGC 59.216 50.000 0.00 0.00 41.19 5.92
7436 8201 2.422276 AGCAGCTAAAACCAAAAGCG 57.578 45.000 0.00 0.00 41.19 4.68
7477 8268 5.776744 AGCAATCAAAGATTGTTCTTCCAC 58.223 37.500 17.93 2.78 41.42 4.02
7537 8483 9.350951 TCCTGACTATCGAAAGTTCAGATTATA 57.649 33.333 14.79 0.00 31.68 0.98
7613 8821 9.878599 GATTATAAACCGTTGGACATTTATCAG 57.121 33.333 0.00 0.00 31.43 2.90
7639 9128 6.575162 ATGACCCTTGTTGTTAAGCTAAAG 57.425 37.500 0.00 0.00 0.00 1.85
7778 9713 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
7779 9714 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
7780 9715 3.497262 GGACTTACAAAAGTGAACGGAGG 59.503 47.826 0.00 0.00 46.09 4.30
7781 9716 4.377897 AGGACTTACAAAAGTGAACGGAG 58.622 43.478 0.00 0.00 46.09 4.63
7782 9717 4.411256 AGGACTTACAAAAGTGAACGGA 57.589 40.909 0.00 0.00 46.09 4.69
7783 9718 5.065474 TGAAAGGACTTACAAAAGTGAACGG 59.935 40.000 0.00 0.00 46.09 4.44
7784 9719 6.114221 TGAAAGGACTTACAAAAGTGAACG 57.886 37.500 0.00 0.00 46.09 3.95
7785 9720 7.810759 TGTTTGAAAGGACTTACAAAAGTGAAC 59.189 33.333 0.00 0.00 46.09 3.18
7786 9721 7.887381 TGTTTGAAAGGACTTACAAAAGTGAA 58.113 30.769 0.00 0.00 46.09 3.18
7787 9722 7.455641 TGTTTGAAAGGACTTACAAAAGTGA 57.544 32.000 0.00 0.00 46.09 3.41
7788 9723 7.812669 AGTTGTTTGAAAGGACTTACAAAAGTG 59.187 33.333 0.00 0.00 46.09 3.16
7790 9725 8.026607 TGAGTTGTTTGAAAGGACTTACAAAAG 58.973 33.333 0.00 0.00 38.77 2.27
7791 9726 7.887381 TGAGTTGTTTGAAAGGACTTACAAAA 58.113 30.769 0.00 0.00 34.76 2.44
7792 9727 7.455641 TGAGTTGTTTGAAAGGACTTACAAA 57.544 32.000 0.00 0.00 0.00 2.83
7793 9728 7.455641 TTGAGTTGTTTGAAAGGACTTACAA 57.544 32.000 0.00 0.00 0.00 2.41
7794 9729 7.639113 ATTGAGTTGTTTGAAAGGACTTACA 57.361 32.000 0.00 0.00 0.00 2.41
7797 9732 9.793259 TCTATATTGAGTTGTTTGAAAGGACTT 57.207 29.630 0.00 0.00 0.00 3.01
7798 9733 9.965902 ATCTATATTGAGTTGTTTGAAAGGACT 57.034 29.630 0.00 0.00 0.00 3.85
7808 9743 9.410556 GTGCAAAACAATCTATATTGAGTTGTT 57.589 29.630 7.76 15.07 44.50 2.83
7809 9744 8.575589 TGTGCAAAACAATCTATATTGAGTTGT 58.424 29.630 7.76 8.19 44.50 3.32
7810 9745 8.969121 TGTGCAAAACAATCTATATTGAGTTG 57.031 30.769 7.76 10.71 44.50 3.16
7812 9747 9.577110 CAATGTGCAAAACAATCTATATTGAGT 57.423 29.630 7.76 0.00 44.50 3.41
7813 9748 9.577110 ACAATGTGCAAAACAATCTATATTGAG 57.423 29.630 7.76 0.00 44.50 3.02
7814 9749 9.571810 GACAATGTGCAAAACAATCTATATTGA 57.428 29.630 7.76 0.00 44.50 2.57
7815 9750 9.577110 AGACAATGTGCAAAACAATCTATATTG 57.423 29.630 0.00 0.00 46.66 1.90
7816 9751 9.577110 CAGACAATGTGCAAAACAATCTATATT 57.423 29.630 0.00 0.00 43.61 1.28
7817 9752 8.959548 TCAGACAATGTGCAAAACAATCTATAT 58.040 29.630 0.00 0.00 43.61 0.86
7818 9753 8.334263 TCAGACAATGTGCAAAACAATCTATA 57.666 30.769 0.00 0.00 43.61 1.31
7819 9754 7.218228 TCAGACAATGTGCAAAACAATCTAT 57.782 32.000 0.00 0.00 43.61 1.98
7820 9755 6.631971 TCAGACAATGTGCAAAACAATCTA 57.368 33.333 0.00 0.00 43.61 1.98
7821 9756 5.518848 TCAGACAATGTGCAAAACAATCT 57.481 34.783 0.00 0.00 43.61 2.40
7822 9757 6.586868 TTTCAGACAATGTGCAAAACAATC 57.413 33.333 0.00 0.00 43.61 2.67
7823 9758 6.539464 ACATTTCAGACAATGTGCAAAACAAT 59.461 30.769 0.00 0.00 44.19 2.71
7824 9759 5.873712 ACATTTCAGACAATGTGCAAAACAA 59.126 32.000 0.00 0.00 44.19 2.83
7825 9760 5.417811 ACATTTCAGACAATGTGCAAAACA 58.582 33.333 0.00 0.00 44.19 2.83
7826 9761 5.750067 AGACATTTCAGACAATGTGCAAAAC 59.250 36.000 12.82 2.36 45.55 2.43
7827 9762 5.904941 AGACATTTCAGACAATGTGCAAAA 58.095 33.333 12.82 0.00 45.55 2.44
7828 9763 5.518848 AGACATTTCAGACAATGTGCAAA 57.481 34.783 12.82 0.00 45.55 3.68
7829 9764 5.067544 TGAAGACATTTCAGACAATGTGCAA 59.932 36.000 12.82 0.00 45.55 4.08
7830 9765 4.579753 TGAAGACATTTCAGACAATGTGCA 59.420 37.500 12.82 0.00 45.55 4.57
7831 9766 5.112220 TGAAGACATTTCAGACAATGTGC 57.888 39.130 12.82 7.29 45.55 4.57
7832 9767 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
7834 9769 6.206243 AGACCTTGAAGACATTTCAGACAATG 59.794 38.462 0.00 0.00 39.67 2.82
7835 9770 6.302269 AGACCTTGAAGACATTTCAGACAAT 58.698 36.000 0.00 0.00 0.00 2.71
7836 9771 5.684704 AGACCTTGAAGACATTTCAGACAA 58.315 37.500 0.00 0.00 0.00 3.18
7837 9772 5.296151 AGACCTTGAAGACATTTCAGACA 57.704 39.130 0.00 0.00 0.00 3.41
7838 9773 7.730364 TTAAGACCTTGAAGACATTTCAGAC 57.270 36.000 0.00 0.00 0.00 3.51
7839 9774 7.773224 TGTTTAAGACCTTGAAGACATTTCAGA 59.227 33.333 0.00 0.00 0.00 3.27
7840 9775 7.930217 TGTTTAAGACCTTGAAGACATTTCAG 58.070 34.615 0.00 0.00 0.00 3.02
7841 9776 7.773224 TCTGTTTAAGACCTTGAAGACATTTCA 59.227 33.333 0.00 0.00 0.00 2.69
7842 9777 8.154649 TCTGTTTAAGACCTTGAAGACATTTC 57.845 34.615 0.00 0.00 0.00 2.17
7843 9778 7.229506 CCTCTGTTTAAGACCTTGAAGACATTT 59.770 37.037 0.00 0.00 0.00 2.32
7844 9779 6.712547 CCTCTGTTTAAGACCTTGAAGACATT 59.287 38.462 0.00 0.00 0.00 2.71
7845 9780 6.234177 CCTCTGTTTAAGACCTTGAAGACAT 58.766 40.000 0.00 0.00 0.00 3.06
7846 9781 5.454755 CCCTCTGTTTAAGACCTTGAAGACA 60.455 44.000 0.00 0.00 0.00 3.41
7847 9782 4.998033 CCCTCTGTTTAAGACCTTGAAGAC 59.002 45.833 0.00 0.00 0.00 3.01
7848 9783 4.905456 TCCCTCTGTTTAAGACCTTGAAGA 59.095 41.667 0.00 0.00 0.00 2.87
7849 9784 5.221742 ACTCCCTCTGTTTAAGACCTTGAAG 60.222 44.000 0.00 0.00 0.00 3.02
7850 9785 4.658901 ACTCCCTCTGTTTAAGACCTTGAA 59.341 41.667 0.00 0.00 0.00 2.69
7851 9786 4.232091 ACTCCCTCTGTTTAAGACCTTGA 58.768 43.478 0.00 0.00 0.00 3.02
7852 9787 4.625607 ACTCCCTCTGTTTAAGACCTTG 57.374 45.455 0.00 0.00 0.00 3.61
7853 9788 6.954352 ATTACTCCCTCTGTTTAAGACCTT 57.046 37.500 0.00 0.00 0.00 3.50
7854 9789 9.369672 CTATATTACTCCCTCTGTTTAAGACCT 57.630 37.037 0.00 0.00 0.00 3.85
7855 9790 8.586744 CCTATATTACTCCCTCTGTTTAAGACC 58.413 40.741 0.00 0.00 0.00 3.85
7856 9791 9.145442 ACCTATATTACTCCCTCTGTTTAAGAC 57.855 37.037 0.00 0.00 0.00 3.01
7857 9792 9.144298 CACCTATATTACTCCCTCTGTTTAAGA 57.856 37.037 0.00 0.00 0.00 2.10
7858 9793 8.368668 CCACCTATATTACTCCCTCTGTTTAAG 58.631 40.741 0.00 0.00 0.00 1.85
7859 9794 8.069356 TCCACCTATATTACTCCCTCTGTTTAA 58.931 37.037 0.00 0.00 0.00 1.52
7860 9795 7.598248 TCCACCTATATTACTCCCTCTGTTTA 58.402 38.462 0.00 0.00 0.00 2.01
7861 9796 6.449956 TCCACCTATATTACTCCCTCTGTTT 58.550 40.000 0.00 0.00 0.00 2.83
7862 9797 6.039415 TCCACCTATATTACTCCCTCTGTT 57.961 41.667 0.00 0.00 0.00 3.16
7863 9798 5.681494 TCCACCTATATTACTCCCTCTGT 57.319 43.478 0.00 0.00 0.00 3.41
7864 9799 6.519213 GCTTTCCACCTATATTACTCCCTCTG 60.519 46.154 0.00 0.00 0.00 3.35
7865 9800 5.544562 GCTTTCCACCTATATTACTCCCTCT 59.455 44.000 0.00 0.00 0.00 3.69
7866 9801 5.307196 TGCTTTCCACCTATATTACTCCCTC 59.693 44.000 0.00 0.00 0.00 4.30
7867 9802 5.224441 TGCTTTCCACCTATATTACTCCCT 58.776 41.667 0.00 0.00 0.00 4.20
7868 9803 5.562298 TGCTTTCCACCTATATTACTCCC 57.438 43.478 0.00 0.00 0.00 4.30
7869 9804 9.220767 CTTATTGCTTTCCACCTATATTACTCC 57.779 37.037 0.00 0.00 0.00 3.85
7870 9805 9.780186 ACTTATTGCTTTCCACCTATATTACTC 57.220 33.333 0.00 0.00 0.00 2.59
7950 9885 5.854010 TGTTGCATTTTTGTGGTTACCTA 57.146 34.783 2.07 0.00 0.00 3.08
7956 9891 5.083533 TCTCTTTGTTGCATTTTTGTGGT 57.916 34.783 0.00 0.00 0.00 4.16
7986 9921 5.758784 GTGGCCTAATTAGTGTTATCCTCAC 59.241 44.000 11.50 3.28 36.22 3.51
7995 9930 3.506067 GCAACTTGTGGCCTAATTAGTGT 59.494 43.478 11.50 0.00 0.00 3.55
7996 9931 3.505680 TGCAACTTGTGGCCTAATTAGTG 59.494 43.478 11.50 4.47 0.00 2.74
8005 9940 1.340889 TCTTGATTGCAACTTGTGGCC 59.659 47.619 0.00 0.00 0.00 5.36
8133 10075 5.945784 TGGAGTCAAAATATGAGAAGGGTTG 59.054 40.000 0.00 0.00 39.19 3.77
8173 10115 4.329545 GGCGCTGGACAGGGTTGA 62.330 66.667 7.64 0.00 42.60 3.18
8179 10121 3.114616 CGTGAAGGCGCTGGACAG 61.115 66.667 7.64 0.00 0.00 3.51
8214 10156 0.178068 GGTCAAAGGCGCCAGATCTA 59.822 55.000 31.54 5.58 0.00 1.98
8223 10165 4.351054 AGGGGCAGGTCAAAGGCG 62.351 66.667 0.00 0.00 0.00 5.52
8251 10193 1.746615 CCGTGGCCAGATCCAAGTG 60.747 63.158 5.11 0.00 37.96 3.16
8264 10206 2.605295 TACACAGGTCCCCCGTGG 60.605 66.667 8.19 0.00 38.64 4.94
8265 10207 1.911766 ACTACACAGGTCCCCCGTG 60.912 63.158 2.84 2.84 39.55 4.94
8266 10208 1.911766 CACTACACAGGTCCCCCGT 60.912 63.158 0.00 0.00 35.12 5.28
8267 10209 1.911766 ACACTACACAGGTCCCCCG 60.912 63.158 0.00 0.00 35.12 5.73
8268 10210 1.677552 CACACTACACAGGTCCCCC 59.322 63.158 0.00 0.00 0.00 5.40
8269 10211 1.003718 GCACACTACACAGGTCCCC 60.004 63.158 0.00 0.00 0.00 4.81
8270 10212 0.396811 AAGCACACTACACAGGTCCC 59.603 55.000 0.00 0.00 0.00 4.46
8271 10213 1.202651 ACAAGCACACTACACAGGTCC 60.203 52.381 0.00 0.00 0.00 4.46
8272 10214 2.135933 GACAAGCACACTACACAGGTC 58.864 52.381 0.00 0.00 0.00 3.85
8273 10215 1.762957 AGACAAGCACACTACACAGGT 59.237 47.619 0.00 0.00 0.00 4.00
8274 10216 2.408050 GAGACAAGCACACTACACAGG 58.592 52.381 0.00 0.00 0.00 4.00
8275 10217 2.054363 CGAGACAAGCACACTACACAG 58.946 52.381 0.00 0.00 0.00 3.66
8276 10218 1.269569 CCGAGACAAGCACACTACACA 60.270 52.381 0.00 0.00 0.00 3.72
8277 10219 1.419374 CCGAGACAAGCACACTACAC 58.581 55.000 0.00 0.00 0.00 2.90
8278 10220 0.319555 GCCGAGACAAGCACACTACA 60.320 55.000 0.00 0.00 0.00 2.74
8279 10221 1.014564 GGCCGAGACAAGCACACTAC 61.015 60.000 0.00 0.00 0.00 2.73
8280 10222 1.292223 GGCCGAGACAAGCACACTA 59.708 57.895 0.00 0.00 0.00 2.74
8281 10223 2.031163 GGCCGAGACAAGCACACT 59.969 61.111 0.00 0.00 0.00 3.55
8282 10224 3.414700 CGGCCGAGACAAGCACAC 61.415 66.667 24.07 0.00 0.00 3.82
8283 10225 3.923864 ACGGCCGAGACAAGCACA 61.924 61.111 35.90 0.00 0.00 4.57
8284 10226 3.414700 CACGGCCGAGACAAGCAC 61.415 66.667 35.90 0.00 0.00 4.40
8285 10227 4.680237 CCACGGCCGAGACAAGCA 62.680 66.667 35.90 0.00 0.00 3.91
8297 10239 2.961768 GTCAATTGGTGCCCACGG 59.038 61.111 5.42 0.00 30.78 4.94
8298 10240 2.560861 CGTCAATTGGTGCCCACG 59.439 61.111 5.42 3.12 30.78 4.94
8299 10241 1.586154 CTCCGTCAATTGGTGCCCAC 61.586 60.000 5.42 0.00 30.78 4.61
8300 10242 1.303236 CTCCGTCAATTGGTGCCCA 60.303 57.895 5.42 0.00 0.00 5.36
8301 10243 2.046285 CCTCCGTCAATTGGTGCCC 61.046 63.158 5.42 0.00 0.00 5.36
8302 10244 2.046285 CCCTCCGTCAATTGGTGCC 61.046 63.158 5.42 0.00 0.00 5.01
8303 10245 0.394352 ATCCCTCCGTCAATTGGTGC 60.394 55.000 5.42 0.00 0.00 5.01
8304 10246 2.128771 AATCCCTCCGTCAATTGGTG 57.871 50.000 5.42 0.00 0.00 4.17
8305 10247 2.446435 CAAATCCCTCCGTCAATTGGT 58.554 47.619 5.42 0.00 0.00 3.67
8306 10248 1.750778 CCAAATCCCTCCGTCAATTGG 59.249 52.381 5.42 0.00 0.00 3.16
8307 10249 1.750778 CCCAAATCCCTCCGTCAATTG 59.249 52.381 0.00 0.00 0.00 2.32
8308 10250 1.357761 ACCCAAATCCCTCCGTCAATT 59.642 47.619 0.00 0.00 0.00 2.32
8309 10251 0.999712 ACCCAAATCCCTCCGTCAAT 59.000 50.000 0.00 0.00 0.00 2.57
8310 10252 0.774908 AACCCAAATCCCTCCGTCAA 59.225 50.000 0.00 0.00 0.00 3.18
8311 10253 0.037590 CAACCCAAATCCCTCCGTCA 59.962 55.000 0.00 0.00 0.00 4.35
8312 10254 1.313091 GCAACCCAAATCCCTCCGTC 61.313 60.000 0.00 0.00 0.00 4.79
8313 10255 1.304134 GCAACCCAAATCCCTCCGT 60.304 57.895 0.00 0.00 0.00 4.69
8314 10256 2.406616 CGCAACCCAAATCCCTCCG 61.407 63.158 0.00 0.00 0.00 4.63
8315 10257 2.052104 CCGCAACCCAAATCCCTCC 61.052 63.158 0.00 0.00 0.00 4.30
8316 10258 1.001393 TCCGCAACCCAAATCCCTC 60.001 57.895 0.00 0.00 0.00 4.30
8317 10259 1.000896 CTCCGCAACCCAAATCCCT 60.001 57.895 0.00 0.00 0.00 4.20
8318 10260 1.304134 ACTCCGCAACCCAAATCCC 60.304 57.895 0.00 0.00 0.00 3.85
8319 10261 0.893727 ACACTCCGCAACCCAAATCC 60.894 55.000 0.00 0.00 0.00 3.01
8320 10262 0.240945 CACACTCCGCAACCCAAATC 59.759 55.000 0.00 0.00 0.00 2.17
8321 10263 1.178534 CCACACTCCGCAACCCAAAT 61.179 55.000 0.00 0.00 0.00 2.32
8322 10264 1.826054 CCACACTCCGCAACCCAAA 60.826 57.895 0.00 0.00 0.00 3.28
8323 10265 1.697082 TACCACACTCCGCAACCCAA 61.697 55.000 0.00 0.00 0.00 4.12
8324 10266 2.107041 CTACCACACTCCGCAACCCA 62.107 60.000 0.00 0.00 0.00 4.51
8325 10267 1.375523 CTACCACACTCCGCAACCC 60.376 63.158 0.00 0.00 0.00 4.11
8326 10268 0.389948 CTCTACCACACTCCGCAACC 60.390 60.000 0.00 0.00 0.00 3.77
8327 10269 0.317479 ACTCTACCACACTCCGCAAC 59.683 55.000 0.00 0.00 0.00 4.17
8328 10270 1.045407 AACTCTACCACACTCCGCAA 58.955 50.000 0.00 0.00 0.00 4.85
8329 10271 0.317160 CAACTCTACCACACTCCGCA 59.683 55.000 0.00 0.00 0.00 5.69
8330 10272 1.014564 GCAACTCTACCACACTCCGC 61.015 60.000 0.00 0.00 0.00 5.54
8331 10273 0.317160 TGCAACTCTACCACACTCCG 59.683 55.000 0.00 0.00 0.00 4.63
8332 10274 1.608283 GGTGCAACTCTACCACACTCC 60.608 57.143 0.00 0.00 36.94 3.85
8333 10275 1.070134 TGGTGCAACTCTACCACACTC 59.930 52.381 2.04 0.00 41.80 3.51
8334 10276 1.070758 CTGGTGCAACTCTACCACACT 59.929 52.381 2.04 0.00 41.80 3.55
8335 10277 1.202651 ACTGGTGCAACTCTACCACAC 60.203 52.381 2.04 0.00 41.80 3.82
8336 10278 1.070134 GACTGGTGCAACTCTACCACA 59.930 52.381 2.04 0.00 41.80 4.17
8337 10279 1.797025 GACTGGTGCAACTCTACCAC 58.203 55.000 2.04 0.00 41.80 4.16
8338 10280 0.317160 CGACTGGTGCAACTCTACCA 59.683 55.000 2.04 0.00 44.31 3.25
8339 10281 0.389948 CCGACTGGTGCAACTCTACC 60.390 60.000 2.04 0.00 36.74 3.18
8340 10282 0.389948 CCCGACTGGTGCAACTCTAC 60.390 60.000 2.04 0.00 36.74 2.59
8341 10283 1.972198 CCCGACTGGTGCAACTCTA 59.028 57.895 2.04 0.00 36.74 2.43
8342 10284 2.743718 CCCGACTGGTGCAACTCT 59.256 61.111 2.04 0.00 36.74 3.24
8343 10285 3.050275 GCCCGACTGGTGCAACTC 61.050 66.667 2.04 0.00 36.74 3.01
8344 10286 3.560251 AGCCCGACTGGTGCAACT 61.560 61.111 2.04 0.00 36.74 3.16
8345 10287 3.357079 CAGCCCGACTGGTGCAAC 61.357 66.667 0.00 0.00 43.19 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.