Multiple sequence alignment - TraesCS7A01G515400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G515400 chr7A 100.000 2234 0 0 1 2234 701030064 701027831 0.000000e+00 4126.0
1 TraesCS7A01G515400 chr7A 96.757 740 20 2 1495 2234 288228691 288227956 0.000000e+00 1230.0
2 TraesCS7A01G515400 chr7A 96.221 741 24 2 1494 2234 63946490 63945754 0.000000e+00 1210.0
3 TraesCS7A01G515400 chr7A 96.221 741 24 2 1494 2234 669758943 669758207 0.000000e+00 1210.0
4 TraesCS7A01G515400 chr7A 96.221 741 21 5 1495 2234 712701016 712700282 0.000000e+00 1206.0
5 TraesCS7A01G515400 chr5D 95.072 832 29 11 664 1494 503271547 503272367 0.000000e+00 1299.0
6 TraesCS7A01G515400 chr5D 93.277 833 43 12 663 1494 432397075 432397895 0.000000e+00 1216.0
7 TraesCS7A01G515400 chr6D 94.358 833 35 10 663 1494 458922095 458921274 0.000000e+00 1267.0
8 TraesCS7A01G515400 chr4B 93.660 836 38 10 663 1494 495581989 495581165 0.000000e+00 1236.0
9 TraesCS7A01G515400 chr2B 93.510 832 40 13 664 1494 272615995 272616813 0.000000e+00 1225.0
10 TraesCS7A01G515400 chr2B 100.000 28 0 0 466 493 237980229 237980256 4.000000e-03 52.8
11 TraesCS7A01G515400 chr3A 93.397 833 43 8 663 1494 672903232 672904053 0.000000e+00 1223.0
12 TraesCS7A01G515400 chr3A 96.622 740 19 4 1495 2234 687458297 687457564 0.000000e+00 1223.0
13 TraesCS7A01G515400 chr7D 93.397 833 39 10 663 1494 307046313 307047130 0.000000e+00 1219.0
14 TraesCS7A01G515400 chr7D 92.251 271 17 1 1 271 611072422 611072156 4.500000e-102 381.0
15 TraesCS7A01G515400 chr7D 91.045 134 10 1 268 399 611072092 611071959 1.760000e-41 180.0
16 TraesCS7A01G515400 chr5A 96.351 740 23 2 1495 2234 336670580 336671315 0.000000e+00 1214.0
17 TraesCS7A01G515400 chr5A 96.221 741 22 4 1495 2234 501894124 501894859 0.000000e+00 1208.0
18 TraesCS7A01G515400 chr4A 96.226 742 24 2 1493 2234 529736472 529737209 0.000000e+00 1212.0
19 TraesCS7A01G515400 chr4A 96.221 741 25 2 1494 2234 552457337 552456600 0.000000e+00 1210.0
20 TraesCS7A01G515400 chr5B 92.557 833 47 8 663 1494 617033380 617034198 0.000000e+00 1181.0
21 TraesCS7A01G515400 chr4D 91.947 832 54 8 664 1494 207363490 207364309 0.000000e+00 1153.0
22 TraesCS7A01G515400 chrUn 94.755 286 5 5 663 948 352978452 352978177 9.470000e-119 436.0
23 TraesCS7A01G515400 chr7B 89.091 55 6 0 446 500 626056058 626056004 3.980000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G515400 chr7A 701027831 701030064 2233 True 4126 4126 100.000 1 2234 1 chr7A.!!$R4 2233
1 TraesCS7A01G515400 chr7A 288227956 288228691 735 True 1230 1230 96.757 1495 2234 1 chr7A.!!$R2 739
2 TraesCS7A01G515400 chr7A 63945754 63946490 736 True 1210 1210 96.221 1494 2234 1 chr7A.!!$R1 740
3 TraesCS7A01G515400 chr7A 669758207 669758943 736 True 1210 1210 96.221 1494 2234 1 chr7A.!!$R3 740
4 TraesCS7A01G515400 chr7A 712700282 712701016 734 True 1206 1206 96.221 1495 2234 1 chr7A.!!$R5 739
5 TraesCS7A01G515400 chr5D 503271547 503272367 820 False 1299 1299 95.072 664 1494 1 chr5D.!!$F2 830
6 TraesCS7A01G515400 chr5D 432397075 432397895 820 False 1216 1216 93.277 663 1494 1 chr5D.!!$F1 831
7 TraesCS7A01G515400 chr6D 458921274 458922095 821 True 1267 1267 94.358 663 1494 1 chr6D.!!$R1 831
8 TraesCS7A01G515400 chr4B 495581165 495581989 824 True 1236 1236 93.660 663 1494 1 chr4B.!!$R1 831
9 TraesCS7A01G515400 chr2B 272615995 272616813 818 False 1225 1225 93.510 664 1494 1 chr2B.!!$F2 830
10 TraesCS7A01G515400 chr3A 672903232 672904053 821 False 1223 1223 93.397 663 1494 1 chr3A.!!$F1 831
11 TraesCS7A01G515400 chr3A 687457564 687458297 733 True 1223 1223 96.622 1495 2234 1 chr3A.!!$R1 739
12 TraesCS7A01G515400 chr7D 307046313 307047130 817 False 1219 1219 93.397 663 1494 1 chr7D.!!$F1 831
13 TraesCS7A01G515400 chr5A 336670580 336671315 735 False 1214 1214 96.351 1495 2234 1 chr5A.!!$F1 739
14 TraesCS7A01G515400 chr5A 501894124 501894859 735 False 1208 1208 96.221 1495 2234 1 chr5A.!!$F2 739
15 TraesCS7A01G515400 chr4A 529736472 529737209 737 False 1212 1212 96.226 1493 2234 1 chr4A.!!$F1 741
16 TraesCS7A01G515400 chr4A 552456600 552457337 737 True 1210 1210 96.221 1494 2234 1 chr4A.!!$R1 740
17 TraesCS7A01G515400 chr5B 617033380 617034198 818 False 1181 1181 92.557 663 1494 1 chr5B.!!$F1 831
18 TraesCS7A01G515400 chr4D 207363490 207364309 819 False 1153 1153 91.947 664 1494 1 chr4D.!!$F1 830

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 445 0.033228 CTTTGGCCATTTTGCGTCCA 59.967 50.0 6.09 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 1784 1.073923 GGAAAGGGGAAGAACAGAGCA 59.926 52.381 0.0 0.0 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 6.365050 CACTTAGGTGCATTTTCAAATTTGC 58.635 36.000 13.54 1.80 36.61 3.68
37 38 6.203338 CACTTAGGTGCATTTTCAAATTTGCT 59.797 34.615 13.54 4.14 36.61 3.91
38 39 7.384660 CACTTAGGTGCATTTTCAAATTTGCTA 59.615 33.333 13.54 3.22 36.61 3.49
39 40 7.930865 ACTTAGGTGCATTTTCAAATTTGCTAA 59.069 29.630 13.54 9.79 0.00 3.09
40 41 6.790285 AGGTGCATTTTCAAATTTGCTAAG 57.210 33.333 13.54 3.64 0.00 2.18
41 42 5.702209 AGGTGCATTTTCAAATTTGCTAAGG 59.298 36.000 13.54 11.66 0.00 2.69
42 43 5.700373 GGTGCATTTTCAAATTTGCTAAGGA 59.300 36.000 13.54 1.06 0.00 3.36
43 44 6.204495 GGTGCATTTTCAAATTTGCTAAGGAA 59.796 34.615 13.54 3.68 0.00 3.36
44 45 7.293018 GTGCATTTTCAAATTTGCTAAGGAAG 58.707 34.615 13.54 0.30 0.00 3.46
45 46 6.427547 TGCATTTTCAAATTTGCTAAGGAAGG 59.572 34.615 13.54 4.80 0.00 3.46
46 47 6.427853 GCATTTTCAAATTTGCTAAGGAAGGT 59.572 34.615 13.54 0.00 0.00 3.50
47 48 7.602265 GCATTTTCAAATTTGCTAAGGAAGGTA 59.398 33.333 13.54 0.00 0.00 3.08
48 49 9.487790 CATTTTCAAATTTGCTAAGGAAGGTAA 57.512 29.630 13.54 0.00 0.00 2.85
49 50 9.710900 ATTTTCAAATTTGCTAAGGAAGGTAAG 57.289 29.630 13.54 0.00 0.00 2.34
50 51 6.267496 TCAAATTTGCTAAGGAAGGTAAGC 57.733 37.500 13.54 0.00 35.51 3.09
51 52 5.772672 TCAAATTTGCTAAGGAAGGTAAGCA 59.227 36.000 13.54 0.00 42.91 3.91
52 53 5.904362 AATTTGCTAAGGAAGGTAAGCAG 57.096 39.130 0.00 0.00 45.04 4.24
53 54 4.634012 TTTGCTAAGGAAGGTAAGCAGA 57.366 40.909 0.00 0.00 45.04 4.26
54 55 3.895232 TGCTAAGGAAGGTAAGCAGAG 57.105 47.619 0.00 0.00 39.92 3.35
55 56 2.501723 TGCTAAGGAAGGTAAGCAGAGG 59.498 50.000 0.00 0.00 39.92 3.69
56 57 2.766828 GCTAAGGAAGGTAAGCAGAGGA 59.233 50.000 0.00 0.00 35.05 3.71
57 58 3.181470 GCTAAGGAAGGTAAGCAGAGGAG 60.181 52.174 0.00 0.00 35.05 3.69
58 59 2.930109 AGGAAGGTAAGCAGAGGAGA 57.070 50.000 0.00 0.00 0.00 3.71
59 60 2.462723 AGGAAGGTAAGCAGAGGAGAC 58.537 52.381 0.00 0.00 0.00 3.36
60 61 1.135333 GGAAGGTAAGCAGAGGAGACG 59.865 57.143 0.00 0.00 0.00 4.18
61 62 2.093106 GAAGGTAAGCAGAGGAGACGA 58.907 52.381 0.00 0.00 0.00 4.20
62 63 2.217510 AGGTAAGCAGAGGAGACGAA 57.782 50.000 0.00 0.00 0.00 3.85
63 64 2.526432 AGGTAAGCAGAGGAGACGAAA 58.474 47.619 0.00 0.00 0.00 3.46
64 65 3.100671 AGGTAAGCAGAGGAGACGAAAT 58.899 45.455 0.00 0.00 0.00 2.17
65 66 3.515901 AGGTAAGCAGAGGAGACGAAATT 59.484 43.478 0.00 0.00 0.00 1.82
66 67 3.619038 GGTAAGCAGAGGAGACGAAATTG 59.381 47.826 0.00 0.00 0.00 2.32
67 68 2.393271 AGCAGAGGAGACGAAATTGG 57.607 50.000 0.00 0.00 0.00 3.16
68 69 1.625818 AGCAGAGGAGACGAAATTGGT 59.374 47.619 0.00 0.00 0.00 3.67
69 70 2.039084 AGCAGAGGAGACGAAATTGGTT 59.961 45.455 0.00 0.00 0.00 3.67
70 71 2.416893 GCAGAGGAGACGAAATTGGTTC 59.583 50.000 0.00 0.00 0.00 3.62
71 72 3.664107 CAGAGGAGACGAAATTGGTTCA 58.336 45.455 0.00 0.00 35.83 3.18
72 73 3.433615 CAGAGGAGACGAAATTGGTTCAC 59.566 47.826 0.00 0.00 35.83 3.18
73 74 3.071023 AGAGGAGACGAAATTGGTTCACA 59.929 43.478 0.00 0.00 35.83 3.58
74 75 3.813166 GAGGAGACGAAATTGGTTCACAA 59.187 43.478 0.00 0.00 44.54 3.33
90 91 9.618890 TTGGTTCACAATTTTCATTTCCAATAA 57.381 25.926 0.00 0.00 33.18 1.40
91 92 9.618890 TGGTTCACAATTTTCATTTCCAATAAA 57.381 25.926 0.00 0.00 0.00 1.40
92 93 9.877137 GGTTCACAATTTTCATTTCCAATAAAC 57.123 29.630 0.00 0.00 0.00 2.01
97 98 9.829507 ACAATTTTCATTTCCAATAAACTGACA 57.170 25.926 0.00 0.00 0.00 3.58
134 135 9.268268 CAGAAATCTGTTACAAAGTTACTACCA 57.732 33.333 2.18 0.00 39.09 3.25
135 136 9.841295 AGAAATCTGTTACAAAGTTACTACCAA 57.159 29.630 0.00 0.00 0.00 3.67
138 139 9.623000 AATCTGTTACAAAGTTACTACCAAAGT 57.377 29.630 0.00 0.00 42.62 2.66
152 153 6.610741 CTACCAAAGTAGCATCCTGATTTC 57.389 41.667 0.00 0.00 39.66 2.17
153 154 5.184892 ACCAAAGTAGCATCCTGATTTCT 57.815 39.130 0.00 0.00 0.00 2.52
154 155 5.189180 ACCAAAGTAGCATCCTGATTTCTC 58.811 41.667 0.00 0.00 0.00 2.87
155 156 5.188434 CCAAAGTAGCATCCTGATTTCTCA 58.812 41.667 0.00 0.00 0.00 3.27
156 157 5.649395 CCAAAGTAGCATCCTGATTTCTCAA 59.351 40.000 0.00 0.00 0.00 3.02
157 158 6.151648 CCAAAGTAGCATCCTGATTTCTCAAA 59.848 38.462 0.00 0.00 0.00 2.69
158 159 6.749923 AAGTAGCATCCTGATTTCTCAAAC 57.250 37.500 0.00 0.00 0.00 2.93
159 160 6.059787 AGTAGCATCCTGATTTCTCAAACT 57.940 37.500 0.00 0.00 0.00 2.66
160 161 6.479884 AGTAGCATCCTGATTTCTCAAACTT 58.520 36.000 0.00 0.00 0.00 2.66
161 162 5.640189 AGCATCCTGATTTCTCAAACTTG 57.360 39.130 0.00 0.00 0.00 3.16
162 163 5.319453 AGCATCCTGATTTCTCAAACTTGA 58.681 37.500 0.00 0.00 35.57 3.02
163 164 5.771666 AGCATCCTGATTTCTCAAACTTGAA 59.228 36.000 0.00 0.00 36.64 2.69
164 165 6.072064 AGCATCCTGATTTCTCAAACTTGAAG 60.072 38.462 0.00 0.00 36.64 3.02
165 166 5.695851 TCCTGATTTCTCAAACTTGAAGC 57.304 39.130 0.00 0.00 36.64 3.86
166 167 4.214119 TCCTGATTTCTCAAACTTGAAGCG 59.786 41.667 0.00 0.00 36.64 4.68
167 168 4.023707 CCTGATTTCTCAAACTTGAAGCGT 60.024 41.667 0.00 0.00 36.64 5.07
168 169 5.179368 CCTGATTTCTCAAACTTGAAGCGTA 59.821 40.000 0.00 0.00 36.64 4.42
169 170 6.293407 CCTGATTTCTCAAACTTGAAGCGTAA 60.293 38.462 0.00 0.00 36.64 3.18
170 171 7.022055 TGATTTCTCAAACTTGAAGCGTAAA 57.978 32.000 0.00 0.00 36.64 2.01
171 172 7.648142 TGATTTCTCAAACTTGAAGCGTAAAT 58.352 30.769 0.00 0.00 36.64 1.40
172 173 8.134895 TGATTTCTCAAACTTGAAGCGTAAATT 58.865 29.630 0.00 0.00 36.64 1.82
173 174 7.678194 TTTCTCAAACTTGAAGCGTAAATTG 57.322 32.000 0.00 0.00 36.64 2.32
174 175 6.371809 TCTCAAACTTGAAGCGTAAATTGT 57.628 33.333 0.00 0.00 36.64 2.71
175 176 6.791303 TCTCAAACTTGAAGCGTAAATTGTT 58.209 32.000 0.00 0.00 36.64 2.83
176 177 6.690957 TCTCAAACTTGAAGCGTAAATTGTTG 59.309 34.615 0.00 0.00 36.64 3.33
177 178 6.326375 TCAAACTTGAAGCGTAAATTGTTGT 58.674 32.000 0.00 0.00 33.55 3.32
178 179 6.809196 TCAAACTTGAAGCGTAAATTGTTGTT 59.191 30.769 0.00 0.00 33.55 2.83
179 180 7.968956 TCAAACTTGAAGCGTAAATTGTTGTTA 59.031 29.630 0.00 0.00 33.55 2.41
180 181 8.751335 CAAACTTGAAGCGTAAATTGTTGTTAT 58.249 29.630 0.00 0.00 0.00 1.89
181 182 8.865590 AACTTGAAGCGTAAATTGTTGTTATT 57.134 26.923 0.00 0.00 0.00 1.40
182 183 8.865590 ACTTGAAGCGTAAATTGTTGTTATTT 57.134 26.923 0.00 0.00 0.00 1.40
183 184 8.964150 ACTTGAAGCGTAAATTGTTGTTATTTC 58.036 29.630 0.00 0.00 0.00 2.17
184 185 8.858003 TTGAAGCGTAAATTGTTGTTATTTCA 57.142 26.923 0.00 0.00 0.00 2.69
185 186 8.858003 TGAAGCGTAAATTGTTGTTATTTCAA 57.142 26.923 0.00 0.00 0.00 2.69
186 187 8.963130 TGAAGCGTAAATTGTTGTTATTTCAAG 58.037 29.630 0.00 0.00 0.00 3.02
187 188 9.176181 GAAGCGTAAATTGTTGTTATTTCAAGA 57.824 29.630 0.00 0.00 0.00 3.02
188 189 9.691362 AAGCGTAAATTGTTGTTATTTCAAGAT 57.309 25.926 0.00 0.00 0.00 2.40
189 190 9.128107 AGCGTAAATTGTTGTTATTTCAAGATG 57.872 29.630 0.00 0.00 0.00 2.90
190 191 7.892731 GCGTAAATTGTTGTTATTTCAAGATGC 59.107 33.333 0.00 0.00 0.00 3.91
191 192 8.910666 CGTAAATTGTTGTTATTTCAAGATGCA 58.089 29.630 0.00 0.00 0.00 3.96
197 198 8.410030 TGTTGTTATTTCAAGATGCATAATGC 57.590 30.769 0.00 0.00 45.29 3.56
211 212 3.970610 GCATAATGCATGAAGTTACTGCG 59.029 43.478 0.00 0.00 44.26 5.18
212 213 4.530388 CATAATGCATGAAGTTACTGCGG 58.470 43.478 0.00 0.00 38.75 5.69
213 214 2.401583 ATGCATGAAGTTACTGCGGA 57.598 45.000 0.00 0.00 38.75 5.54
214 215 1.438651 TGCATGAAGTTACTGCGGAC 58.561 50.000 0.00 0.00 38.75 4.79
215 216 1.270571 TGCATGAAGTTACTGCGGACA 60.271 47.619 0.00 0.00 38.75 4.02
216 217 1.804151 GCATGAAGTTACTGCGGACAA 59.196 47.619 0.00 0.00 0.00 3.18
217 218 2.225491 GCATGAAGTTACTGCGGACAAA 59.775 45.455 0.00 0.00 0.00 2.83
218 219 3.304391 GCATGAAGTTACTGCGGACAAAA 60.304 43.478 0.00 0.00 0.00 2.44
219 220 4.615912 GCATGAAGTTACTGCGGACAAAAT 60.616 41.667 0.00 0.00 0.00 1.82
220 221 5.460646 CATGAAGTTACTGCGGACAAAATT 58.539 37.500 0.00 0.00 0.00 1.82
221 222 4.854399 TGAAGTTACTGCGGACAAAATTG 58.146 39.130 0.00 0.00 0.00 2.32
222 223 4.576873 TGAAGTTACTGCGGACAAAATTGA 59.423 37.500 0.00 0.00 0.00 2.57
223 224 4.483476 AGTTACTGCGGACAAAATTGAC 57.517 40.909 0.00 0.00 0.00 3.18
224 225 3.880490 AGTTACTGCGGACAAAATTGACA 59.120 39.130 0.00 0.00 0.00 3.58
225 226 4.024048 AGTTACTGCGGACAAAATTGACAG 60.024 41.667 0.00 4.84 0.00 3.51
226 227 1.001378 ACTGCGGACAAAATTGACAGC 60.001 47.619 12.03 12.03 42.06 4.40
227 228 1.001487 CTGCGGACAAAATTGACAGCA 60.001 47.619 18.03 18.03 46.52 4.41
228 229 1.612950 TGCGGACAAAATTGACAGCAT 59.387 42.857 16.05 0.00 44.83 3.79
229 230 1.987770 GCGGACAAAATTGACAGCATG 59.012 47.619 13.48 0.00 41.57 4.06
245 246 3.742882 CAGCATGTATCAGTATCCAACCG 59.257 47.826 0.00 0.00 0.00 4.44
246 247 3.388024 AGCATGTATCAGTATCCAACCGT 59.612 43.478 0.00 0.00 0.00 4.83
247 248 4.587262 AGCATGTATCAGTATCCAACCGTA 59.413 41.667 0.00 0.00 0.00 4.02
248 249 5.069914 AGCATGTATCAGTATCCAACCGTAA 59.930 40.000 0.00 0.00 0.00 3.18
249 250 5.756347 GCATGTATCAGTATCCAACCGTAAA 59.244 40.000 0.00 0.00 0.00 2.01
250 251 6.426937 GCATGTATCAGTATCCAACCGTAAAT 59.573 38.462 0.00 0.00 0.00 1.40
251 252 7.360101 GCATGTATCAGTATCCAACCGTAAATC 60.360 40.741 0.00 0.00 0.00 2.17
252 253 7.114866 TGTATCAGTATCCAACCGTAAATCA 57.885 36.000 0.00 0.00 0.00 2.57
253 254 7.557724 TGTATCAGTATCCAACCGTAAATCAA 58.442 34.615 0.00 0.00 0.00 2.57
254 255 7.709182 TGTATCAGTATCCAACCGTAAATCAAG 59.291 37.037 0.00 0.00 0.00 3.02
255 256 4.873827 TCAGTATCCAACCGTAAATCAAGC 59.126 41.667 0.00 0.00 0.00 4.01
256 257 4.634004 CAGTATCCAACCGTAAATCAAGCA 59.366 41.667 0.00 0.00 0.00 3.91
257 258 5.296780 CAGTATCCAACCGTAAATCAAGCAT 59.703 40.000 0.00 0.00 0.00 3.79
258 259 6.481976 CAGTATCCAACCGTAAATCAAGCATA 59.518 38.462 0.00 0.00 0.00 3.14
259 260 6.706270 AGTATCCAACCGTAAATCAAGCATAG 59.294 38.462 0.00 0.00 0.00 2.23
260 261 5.092554 TCCAACCGTAAATCAAGCATAGA 57.907 39.130 0.00 0.00 0.00 1.98
261 262 5.492895 TCCAACCGTAAATCAAGCATAGAA 58.507 37.500 0.00 0.00 0.00 2.10
262 263 5.941058 TCCAACCGTAAATCAAGCATAGAAA 59.059 36.000 0.00 0.00 0.00 2.52
263 264 6.431543 TCCAACCGTAAATCAAGCATAGAAAA 59.568 34.615 0.00 0.00 0.00 2.29
264 265 7.040340 TCCAACCGTAAATCAAGCATAGAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
265 266 7.061789 CCAACCGTAAATCAAGCATAGAAAAAC 59.938 37.037 0.00 0.00 0.00 2.43
266 267 7.448748 ACCGTAAATCAAGCATAGAAAAACT 57.551 32.000 0.00 0.00 0.00 2.66
267 268 8.556213 ACCGTAAATCAAGCATAGAAAAACTA 57.444 30.769 0.00 0.00 35.42 2.24
268 269 8.665685 ACCGTAAATCAAGCATAGAAAAACTAG 58.334 33.333 0.00 0.00 34.35 2.57
269 270 7.640240 CCGTAAATCAAGCATAGAAAAACTAGC 59.360 37.037 0.00 0.00 34.35 3.42
270 271 8.175069 CGTAAATCAAGCATAGAAAAACTAGCA 58.825 33.333 0.00 0.00 34.35 3.49
275 276 8.560355 TCAAGCATAGAAAAACTAGCATTACA 57.440 30.769 0.00 0.00 34.35 2.41
276 277 8.668353 TCAAGCATAGAAAAACTAGCATTACAG 58.332 33.333 0.00 0.00 34.35 2.74
277 278 8.668353 CAAGCATAGAAAAACTAGCATTACAGA 58.332 33.333 0.00 0.00 34.35 3.41
278 279 8.202745 AGCATAGAAAAACTAGCATTACAGAC 57.797 34.615 0.00 0.00 34.35 3.51
279 280 8.043710 AGCATAGAAAAACTAGCATTACAGACT 58.956 33.333 0.00 0.00 34.35 3.24
280 281 9.314321 GCATAGAAAAACTAGCATTACAGACTA 57.686 33.333 0.00 0.00 34.35 2.59
301 302 3.884037 ACTGAGGAATGTTCCCAGTTT 57.116 42.857 20.65 8.01 46.93 2.66
302 303 3.490348 ACTGAGGAATGTTCCCAGTTTG 58.510 45.455 20.65 7.41 46.93 2.93
303 304 3.138283 ACTGAGGAATGTTCCCAGTTTGA 59.862 43.478 20.65 0.00 46.93 2.69
304 305 4.386312 ACTGAGGAATGTTCCCAGTTTGAA 60.386 41.667 20.65 0.00 46.93 2.69
305 306 5.868598 ACTGAGGAATGTTCCCAGTTTGAAA 60.869 40.000 20.65 0.00 46.93 2.69
306 307 7.313496 ACTGAGGAATGTTCCCAGTTTGAAAA 61.313 38.462 20.65 0.00 46.93 2.29
307 308 8.725190 ACTGAGGAATGTTCCCAGTTTGAAAAA 61.725 37.037 20.65 0.00 46.93 1.94
333 334 2.858745 GGTTAGAAACAACCAGCAGGA 58.141 47.619 0.35 0.00 46.14 3.86
334 335 3.219281 GGTTAGAAACAACCAGCAGGAA 58.781 45.455 0.35 0.00 46.14 3.36
335 336 3.826729 GGTTAGAAACAACCAGCAGGAAT 59.173 43.478 0.35 0.00 46.14 3.01
336 337 4.321230 GGTTAGAAACAACCAGCAGGAATG 60.321 45.833 0.35 3.06 46.14 2.67
337 338 2.949447 AGAAACAACCAGCAGGAATGT 58.051 42.857 0.35 3.75 39.16 2.71
338 339 2.624838 AGAAACAACCAGCAGGAATGTG 59.375 45.455 0.35 0.00 38.10 3.21
339 340 0.675633 AACAACCAGCAGGAATGTGC 59.324 50.000 0.35 0.00 44.35 4.57
340 341 0.467844 ACAACCAGCAGGAATGTGCA 60.468 50.000 0.35 0.00 46.60 4.57
341 342 0.675083 CAACCAGCAGGAATGTGCAA 59.325 50.000 0.35 0.00 46.60 4.08
342 343 0.675633 AACCAGCAGGAATGTGCAAC 59.324 50.000 0.35 0.00 46.60 4.17
343 344 0.467844 ACCAGCAGGAATGTGCAACA 60.468 50.000 0.35 0.00 46.60 3.33
358 359 6.718522 TGTGCAACATATTCATCCATTGAT 57.281 33.333 0.00 0.00 45.67 2.57
359 360 7.114866 TGTGCAACATATTCATCCATTGATT 57.885 32.000 0.00 0.00 45.67 2.57
360 361 8.235359 TGTGCAACATATTCATCCATTGATTA 57.765 30.769 0.00 0.00 45.67 1.75
361 362 8.693625 TGTGCAACATATTCATCCATTGATTAA 58.306 29.630 0.00 0.00 45.67 1.40
362 363 9.531942 GTGCAACATATTCATCCATTGATTAAA 57.468 29.630 0.00 0.00 36.32 1.52
389 390 9.319143 ACTCTATAAATAACACAAGTGATCTGC 57.681 33.333 7.28 0.00 0.00 4.26
390 391 9.539825 CTCTATAAATAACACAAGTGATCTGCT 57.460 33.333 7.28 0.00 0.00 4.24
391 392 9.534565 TCTATAAATAACACAAGTGATCTGCTC 57.465 33.333 7.28 0.00 0.00 4.26
392 393 9.317936 CTATAAATAACACAAGTGATCTGCTCA 57.682 33.333 7.28 0.00 0.00 4.26
393 394 6.882610 AAATAACACAAGTGATCTGCTCAA 57.117 33.333 7.28 0.00 35.07 3.02
394 395 5.869753 ATAACACAAGTGATCTGCTCAAC 57.130 39.130 7.28 0.00 35.07 3.18
395 396 2.498167 ACACAAGTGATCTGCTCAACC 58.502 47.619 7.28 0.00 35.07 3.77
396 397 2.158769 ACACAAGTGATCTGCTCAACCA 60.159 45.455 7.28 0.00 35.07 3.67
397 398 2.880268 CACAAGTGATCTGCTCAACCAA 59.120 45.455 0.00 0.00 35.07 3.67
398 399 3.504906 CACAAGTGATCTGCTCAACCAAT 59.495 43.478 0.00 0.00 35.07 3.16
399 400 3.755378 ACAAGTGATCTGCTCAACCAATC 59.245 43.478 0.00 0.00 35.07 2.67
400 401 2.996631 AGTGATCTGCTCAACCAATCC 58.003 47.619 0.00 0.00 35.07 3.01
401 402 2.306805 AGTGATCTGCTCAACCAATCCA 59.693 45.455 0.00 0.00 35.07 3.41
402 403 3.053842 AGTGATCTGCTCAACCAATCCAT 60.054 43.478 0.00 0.00 35.07 3.41
403 404 4.164796 AGTGATCTGCTCAACCAATCCATA 59.835 41.667 0.00 0.00 35.07 2.74
404 405 4.883585 GTGATCTGCTCAACCAATCCATAA 59.116 41.667 0.00 0.00 35.07 1.90
405 406 4.883585 TGATCTGCTCAACCAATCCATAAC 59.116 41.667 0.00 0.00 0.00 1.89
406 407 4.574674 TCTGCTCAACCAATCCATAACT 57.425 40.909 0.00 0.00 0.00 2.24
407 408 5.692115 TCTGCTCAACCAATCCATAACTA 57.308 39.130 0.00 0.00 0.00 2.24
408 409 5.428253 TCTGCTCAACCAATCCATAACTAC 58.572 41.667 0.00 0.00 0.00 2.73
409 410 4.523083 TGCTCAACCAATCCATAACTACC 58.477 43.478 0.00 0.00 0.00 3.18
410 411 3.883489 GCTCAACCAATCCATAACTACCC 59.117 47.826 0.00 0.00 0.00 3.69
411 412 4.385310 GCTCAACCAATCCATAACTACCCT 60.385 45.833 0.00 0.00 0.00 4.34
412 413 5.755849 CTCAACCAATCCATAACTACCCTT 58.244 41.667 0.00 0.00 0.00 3.95
413 414 6.147437 TCAACCAATCCATAACTACCCTTT 57.853 37.500 0.00 0.00 0.00 3.11
414 415 5.949354 TCAACCAATCCATAACTACCCTTTG 59.051 40.000 0.00 0.00 0.00 2.77
415 416 5.530176 ACCAATCCATAACTACCCTTTGT 57.470 39.130 0.00 0.00 0.00 2.83
416 417 5.261216 ACCAATCCATAACTACCCTTTGTG 58.739 41.667 0.00 0.00 0.00 3.33
417 418 5.222254 ACCAATCCATAACTACCCTTTGTGT 60.222 40.000 0.00 0.00 0.00 3.72
418 419 5.125417 CCAATCCATAACTACCCTTTGTGTG 59.875 44.000 0.00 0.00 0.00 3.82
419 420 4.986054 TCCATAACTACCCTTTGTGTGT 57.014 40.909 0.00 0.00 0.00 3.72
420 421 5.313280 TCCATAACTACCCTTTGTGTGTT 57.687 39.130 0.00 0.00 0.00 3.32
421 422 5.697067 TCCATAACTACCCTTTGTGTGTTT 58.303 37.500 0.00 0.00 0.00 2.83
422 423 6.130569 TCCATAACTACCCTTTGTGTGTTTT 58.869 36.000 0.00 0.00 0.00 2.43
423 424 6.608002 TCCATAACTACCCTTTGTGTGTTTTT 59.392 34.615 0.00 0.00 0.00 1.94
424 425 7.778853 TCCATAACTACCCTTTGTGTGTTTTTA 59.221 33.333 0.00 0.00 0.00 1.52
425 426 7.863877 CCATAACTACCCTTTGTGTGTTTTTAC 59.136 37.037 0.00 0.00 0.00 2.01
426 427 8.626526 CATAACTACCCTTTGTGTGTTTTTACT 58.373 33.333 0.00 0.00 0.00 2.24
427 428 7.470935 AACTACCCTTTGTGTGTTTTTACTT 57.529 32.000 0.00 0.00 0.00 2.24
428 429 7.470935 ACTACCCTTTGTGTGTTTTTACTTT 57.529 32.000 0.00 0.00 0.00 2.66
429 430 7.317390 ACTACCCTTTGTGTGTTTTTACTTTG 58.683 34.615 0.00 0.00 0.00 2.77
430 431 5.483811 ACCCTTTGTGTGTTTTTACTTTGG 58.516 37.500 0.00 0.00 0.00 3.28
431 432 4.331443 CCCTTTGTGTGTTTTTACTTTGGC 59.669 41.667 0.00 0.00 0.00 4.52
432 433 4.331443 CCTTTGTGTGTTTTTACTTTGGCC 59.669 41.667 0.00 0.00 0.00 5.36
433 434 4.537135 TTGTGTGTTTTTACTTTGGCCA 57.463 36.364 0.00 0.00 0.00 5.36
434 435 4.744795 TGTGTGTTTTTACTTTGGCCAT 57.255 36.364 6.09 0.00 0.00 4.40
435 436 5.091261 TGTGTGTTTTTACTTTGGCCATT 57.909 34.783 6.09 0.00 0.00 3.16
436 437 5.491982 TGTGTGTTTTTACTTTGGCCATTT 58.508 33.333 6.09 0.00 0.00 2.32
437 438 5.940470 TGTGTGTTTTTACTTTGGCCATTTT 59.060 32.000 6.09 0.00 0.00 1.82
438 439 6.128172 TGTGTGTTTTTACTTTGGCCATTTTG 60.128 34.615 6.09 0.00 0.00 2.44
439 440 5.163713 TGTGTTTTTACTTTGGCCATTTTGC 60.164 36.000 6.09 0.00 0.00 3.68
440 441 4.034510 TGTTTTTACTTTGGCCATTTTGCG 59.965 37.500 6.09 0.00 0.00 4.85
441 442 3.460857 TTTACTTTGGCCATTTTGCGT 57.539 38.095 6.09 0.06 0.00 5.24
442 443 2.715737 TACTTTGGCCATTTTGCGTC 57.284 45.000 6.09 0.00 0.00 5.19
443 444 0.033366 ACTTTGGCCATTTTGCGTCC 59.967 50.000 6.09 0.00 0.00 4.79
444 445 0.033228 CTTTGGCCATTTTGCGTCCA 59.967 50.000 6.09 0.00 0.00 4.02
445 446 0.465705 TTTGGCCATTTTGCGTCCAA 59.534 45.000 6.09 0.00 35.25 3.53
446 447 0.683973 TTGGCCATTTTGCGTCCAAT 59.316 45.000 6.09 0.00 32.42 3.16
447 448 0.683973 TGGCCATTTTGCGTCCAATT 59.316 45.000 0.00 0.00 0.00 2.32
448 449 1.077915 GGCCATTTTGCGTCCAATTG 58.922 50.000 0.00 0.00 0.00 2.32
449 450 1.607767 GGCCATTTTGCGTCCAATTGT 60.608 47.619 4.43 0.00 0.00 2.71
450 451 1.726248 GCCATTTTGCGTCCAATTGTC 59.274 47.619 4.43 0.00 0.00 3.18
451 452 2.610232 GCCATTTTGCGTCCAATTGTCT 60.610 45.455 4.43 0.00 0.00 3.41
452 453 3.652274 CCATTTTGCGTCCAATTGTCTT 58.348 40.909 4.43 0.00 0.00 3.01
453 454 4.057432 CCATTTTGCGTCCAATTGTCTTT 58.943 39.130 4.43 0.00 0.00 2.52
454 455 4.150451 CCATTTTGCGTCCAATTGTCTTTC 59.850 41.667 4.43 0.00 0.00 2.62
455 456 3.363341 TTTGCGTCCAATTGTCTTTCC 57.637 42.857 4.43 0.00 0.00 3.13
456 457 1.974265 TGCGTCCAATTGTCTTTCCA 58.026 45.000 4.43 0.00 0.00 3.53
457 458 2.513753 TGCGTCCAATTGTCTTTCCAT 58.486 42.857 4.43 0.00 0.00 3.41
458 459 2.890311 TGCGTCCAATTGTCTTTCCATT 59.110 40.909 4.43 0.00 0.00 3.16
459 460 3.244976 GCGTCCAATTGTCTTTCCATTG 58.755 45.455 4.43 0.00 0.00 2.82
460 461 3.305335 GCGTCCAATTGTCTTTCCATTGT 60.305 43.478 4.43 0.00 0.00 2.71
461 462 4.083003 GCGTCCAATTGTCTTTCCATTGTA 60.083 41.667 4.43 0.00 0.00 2.41
462 463 5.393027 GCGTCCAATTGTCTTTCCATTGTAT 60.393 40.000 4.43 0.00 0.00 2.29
463 464 6.620678 CGTCCAATTGTCTTTCCATTGTATT 58.379 36.000 4.43 0.00 0.00 1.89
464 465 6.527722 CGTCCAATTGTCTTTCCATTGTATTG 59.472 38.462 4.43 0.00 0.00 1.90
465 466 7.574779 CGTCCAATTGTCTTTCCATTGTATTGA 60.575 37.037 4.43 0.00 0.00 2.57
466 467 7.542130 GTCCAATTGTCTTTCCATTGTATTGAC 59.458 37.037 4.43 0.00 0.00 3.18
467 468 7.451255 TCCAATTGTCTTTCCATTGTATTGACT 59.549 33.333 4.43 0.00 0.00 3.41
468 469 8.739039 CCAATTGTCTTTCCATTGTATTGACTA 58.261 33.333 4.43 0.00 0.00 2.59
472 473 8.862325 TGTCTTTCCATTGTATTGACTATTGT 57.138 30.769 0.00 0.00 0.00 2.71
473 474 9.295825 TGTCTTTCCATTGTATTGACTATTGTT 57.704 29.630 0.00 0.00 0.00 2.83
477 478 9.921637 TTTCCATTGTATTGACTATTGTTTTCC 57.078 29.630 0.00 0.00 0.00 3.13
478 479 8.877864 TCCATTGTATTGACTATTGTTTTCCT 57.122 30.769 0.00 0.00 0.00 3.36
479 480 8.956426 TCCATTGTATTGACTATTGTTTTCCTC 58.044 33.333 0.00 0.00 0.00 3.71
480 481 7.910162 CCATTGTATTGACTATTGTTTTCCTCG 59.090 37.037 0.00 0.00 0.00 4.63
481 482 8.664798 CATTGTATTGACTATTGTTTTCCTCGA 58.335 33.333 0.00 0.00 0.00 4.04
482 483 8.786826 TTGTATTGACTATTGTTTTCCTCGAT 57.213 30.769 0.00 0.00 0.00 3.59
483 484 9.878667 TTGTATTGACTATTGTTTTCCTCGATA 57.121 29.630 0.00 0.00 0.00 2.92
484 485 9.878667 TGTATTGACTATTGTTTTCCTCGATAA 57.121 29.630 0.00 0.00 0.00 1.75
519 520 4.405116 GAGCATCTCTGACCAATCTCTT 57.595 45.455 0.00 0.00 0.00 2.85
520 521 5.528043 GAGCATCTCTGACCAATCTCTTA 57.472 43.478 0.00 0.00 0.00 2.10
521 522 6.100404 GAGCATCTCTGACCAATCTCTTAT 57.900 41.667 0.00 0.00 0.00 1.73
522 523 7.225784 GAGCATCTCTGACCAATCTCTTATA 57.774 40.000 0.00 0.00 0.00 0.98
523 524 7.609097 AGCATCTCTGACCAATCTCTTATAA 57.391 36.000 0.00 0.00 0.00 0.98
524 525 8.204903 AGCATCTCTGACCAATCTCTTATAAT 57.795 34.615 0.00 0.00 0.00 1.28
525 526 8.658619 AGCATCTCTGACCAATCTCTTATAATT 58.341 33.333 0.00 0.00 0.00 1.40
526 527 9.282569 GCATCTCTGACCAATCTCTTATAATTT 57.717 33.333 0.00 0.00 0.00 1.82
529 530 9.988815 TCTCTGACCAATCTCTTATAATTTAGC 57.011 33.333 0.00 0.00 0.00 3.09
530 531 9.213799 CTCTGACCAATCTCTTATAATTTAGCC 57.786 37.037 0.00 0.00 0.00 3.93
531 532 8.157476 TCTGACCAATCTCTTATAATTTAGCCC 58.843 37.037 0.00 0.00 0.00 5.19
532 533 7.231467 TGACCAATCTCTTATAATTTAGCCCC 58.769 38.462 0.00 0.00 0.00 5.80
533 534 7.073725 TGACCAATCTCTTATAATTTAGCCCCT 59.926 37.037 0.00 0.00 0.00 4.79
534 535 7.462590 ACCAATCTCTTATAATTTAGCCCCTC 58.537 38.462 0.00 0.00 0.00 4.30
535 536 7.073725 ACCAATCTCTTATAATTTAGCCCCTCA 59.926 37.037 0.00 0.00 0.00 3.86
536 537 7.944554 CCAATCTCTTATAATTTAGCCCCTCAA 59.055 37.037 0.00 0.00 0.00 3.02
537 538 9.354673 CAATCTCTTATAATTTAGCCCCTCAAA 57.645 33.333 0.00 0.00 0.00 2.69
538 539 8.926092 ATCTCTTATAATTTAGCCCCTCAAAC 57.074 34.615 0.00 0.00 0.00 2.93
539 540 6.990349 TCTCTTATAATTTAGCCCCTCAAACG 59.010 38.462 0.00 0.00 0.00 3.60
540 541 6.891388 TCTTATAATTTAGCCCCTCAAACGA 58.109 36.000 0.00 0.00 0.00 3.85
541 542 6.764560 TCTTATAATTTAGCCCCTCAAACGAC 59.235 38.462 0.00 0.00 0.00 4.34
542 543 2.124277 ATTTAGCCCCTCAAACGACC 57.876 50.000 0.00 0.00 0.00 4.79
543 544 0.037160 TTTAGCCCCTCAAACGACCC 59.963 55.000 0.00 0.00 0.00 4.46
544 545 1.844544 TTAGCCCCTCAAACGACCCC 61.845 60.000 0.00 0.00 0.00 4.95
545 546 3.961414 GCCCCTCAAACGACCCCA 61.961 66.667 0.00 0.00 0.00 4.96
546 547 2.033602 CCCCTCAAACGACCCCAC 59.966 66.667 0.00 0.00 0.00 4.61
547 548 2.824880 CCCCTCAAACGACCCCACA 61.825 63.158 0.00 0.00 0.00 4.17
548 549 1.149627 CCCTCAAACGACCCCACAA 59.850 57.895 0.00 0.00 0.00 3.33
549 550 0.466555 CCCTCAAACGACCCCACAAA 60.467 55.000 0.00 0.00 0.00 2.83
550 551 0.666374 CCTCAAACGACCCCACAAAC 59.334 55.000 0.00 0.00 0.00 2.93
551 552 0.666374 CTCAAACGACCCCACAAACC 59.334 55.000 0.00 0.00 0.00 3.27
552 553 0.256464 TCAAACGACCCCACAAACCT 59.744 50.000 0.00 0.00 0.00 3.50
553 554 1.107945 CAAACGACCCCACAAACCTT 58.892 50.000 0.00 0.00 0.00 3.50
554 555 2.092538 TCAAACGACCCCACAAACCTTA 60.093 45.455 0.00 0.00 0.00 2.69
555 556 2.688958 CAAACGACCCCACAAACCTTAA 59.311 45.455 0.00 0.00 0.00 1.85
556 557 2.732844 ACGACCCCACAAACCTTAAA 57.267 45.000 0.00 0.00 0.00 1.52
557 558 3.232720 ACGACCCCACAAACCTTAAAT 57.767 42.857 0.00 0.00 0.00 1.40
558 559 3.568443 ACGACCCCACAAACCTTAAATT 58.432 40.909 0.00 0.00 0.00 1.82
559 560 3.962063 ACGACCCCACAAACCTTAAATTT 59.038 39.130 0.00 0.00 0.00 1.82
560 561 5.139001 ACGACCCCACAAACCTTAAATTTA 58.861 37.500 0.00 0.00 0.00 1.40
561 562 5.597594 ACGACCCCACAAACCTTAAATTTAA 59.402 36.000 10.16 10.16 0.00 1.52
562 563 5.921976 CGACCCCACAAACCTTAAATTTAAC 59.078 40.000 6.54 0.00 0.00 2.01
563 564 6.177310 ACCCCACAAACCTTAAATTTAACC 57.823 37.500 6.54 0.00 0.00 2.85
564 565 5.221481 ACCCCACAAACCTTAAATTTAACCG 60.221 40.000 6.54 3.16 0.00 4.44
565 566 5.221481 CCCCACAAACCTTAAATTTAACCGT 60.221 40.000 6.54 3.74 0.00 4.83
566 567 6.282167 CCCACAAACCTTAAATTTAACCGTT 58.718 36.000 6.54 9.08 0.00 4.44
567 568 6.762187 CCCACAAACCTTAAATTTAACCGTTT 59.238 34.615 17.72 17.72 0.00 3.60
568 569 7.280428 CCCACAAACCTTAAATTTAACCGTTTT 59.720 33.333 19.45 12.83 0.00 2.43
569 570 8.329583 CCACAAACCTTAAATTTAACCGTTTTC 58.670 33.333 19.45 0.00 0.00 2.29
570 571 8.870879 CACAAACCTTAAATTTAACCGTTTTCA 58.129 29.630 19.45 0.00 0.00 2.69
571 572 8.871862 ACAAACCTTAAATTTAACCGTTTTCAC 58.128 29.630 19.45 0.00 0.00 3.18
572 573 8.870879 CAAACCTTAAATTTAACCGTTTTCACA 58.129 29.630 19.45 0.00 0.00 3.58
573 574 7.990541 ACCTTAAATTTAACCGTTTTCACAC 57.009 32.000 6.54 0.00 0.00 3.82
574 575 7.545489 ACCTTAAATTTAACCGTTTTCACACA 58.455 30.769 6.54 0.00 0.00 3.72
575 576 8.033626 ACCTTAAATTTAACCGTTTTCACACAA 58.966 29.630 6.54 0.00 0.00 3.33
576 577 8.870879 CCTTAAATTTAACCGTTTTCACACAAA 58.129 29.630 6.54 0.00 0.00 2.83
580 581 8.480643 AATTTAACCGTTTTCACACAAATTCA 57.519 26.923 0.00 0.00 0.00 2.57
581 582 8.655651 ATTTAACCGTTTTCACACAAATTCAT 57.344 26.923 0.00 0.00 0.00 2.57
582 583 8.480643 TTTAACCGTTTTCACACAAATTCATT 57.519 26.923 0.00 0.00 0.00 2.57
583 584 6.976636 AACCGTTTTCACACAAATTCATTT 57.023 29.167 0.00 0.00 0.00 2.32
584 585 6.582437 ACCGTTTTCACACAAATTCATTTC 57.418 33.333 0.00 0.00 0.00 2.17
585 586 6.102663 ACCGTTTTCACACAAATTCATTTCA 58.897 32.000 0.00 0.00 0.00 2.69
586 587 6.591834 ACCGTTTTCACACAAATTCATTTCAA 59.408 30.769 0.00 0.00 0.00 2.69
587 588 7.118390 ACCGTTTTCACACAAATTCATTTCAAA 59.882 29.630 0.00 0.00 0.00 2.69
588 589 7.425023 CCGTTTTCACACAAATTCATTTCAAAC 59.575 33.333 0.00 0.00 0.00 2.93
589 590 7.954248 CGTTTTCACACAAATTCATTTCAAACA 59.046 29.630 0.00 0.00 0.00 2.83
590 591 9.049974 GTTTTCACACAAATTCATTTCAAACAC 57.950 29.630 0.00 0.00 0.00 3.32
591 592 6.900568 TCACACAAATTCATTTCAAACACC 57.099 33.333 0.00 0.00 0.00 4.16
592 593 6.401394 TCACACAAATTCATTTCAAACACCA 58.599 32.000 0.00 0.00 0.00 4.17
593 594 6.875726 TCACACAAATTCATTTCAAACACCAA 59.124 30.769 0.00 0.00 0.00 3.67
594 595 7.551974 TCACACAAATTCATTTCAAACACCAAT 59.448 29.630 0.00 0.00 0.00 3.16
595 596 8.182881 CACACAAATTCATTTCAAACACCAATT 58.817 29.630 0.00 0.00 0.00 2.32
596 597 8.182881 ACACAAATTCATTTCAAACACCAATTG 58.817 29.630 0.00 0.00 0.00 2.32
597 598 8.396390 CACAAATTCATTTCAAACACCAATTGA 58.604 29.630 7.12 0.00 35.11 2.57
598 599 8.954350 ACAAATTCATTTCAAACACCAATTGAA 58.046 25.926 7.12 0.00 43.12 2.69
635 636 8.347035 TCAAACACAACTATAAACAAAGGTAGC 58.653 33.333 0.00 0.00 0.00 3.58
636 637 7.811117 AACACAACTATAAACAAAGGTAGCA 57.189 32.000 0.00 0.00 0.00 3.49
637 638 7.198306 ACACAACTATAAACAAAGGTAGCAC 57.802 36.000 0.00 0.00 0.00 4.40
638 639 6.768861 ACACAACTATAAACAAAGGTAGCACA 59.231 34.615 0.00 0.00 0.00 4.57
639 640 7.283580 ACACAACTATAAACAAAGGTAGCACAA 59.716 33.333 0.00 0.00 0.00 3.33
640 641 8.296713 CACAACTATAAACAAAGGTAGCACAAT 58.703 33.333 0.00 0.00 0.00 2.71
641 642 9.509956 ACAACTATAAACAAAGGTAGCACAATA 57.490 29.630 0.00 0.00 0.00 1.90
644 645 9.899661 ACTATAAACAAAGGTAGCACAATATGA 57.100 29.630 0.00 0.00 0.00 2.15
658 659 8.168790 AGCACAATATGATACATTGCATAACA 57.831 30.769 0.00 0.00 36.96 2.41
659 660 8.799367 AGCACAATATGATACATTGCATAACAT 58.201 29.630 0.00 0.00 36.96 2.71
660 661 8.856247 GCACAATATGATACATTGCATAACATG 58.144 33.333 0.00 0.00 36.96 3.21
715 716 9.499479 AATCCATGAACAGAATCTATGTATGTC 57.501 33.333 0.00 0.00 0.00 3.06
804 805 7.948278 TCTCGAAACAAACAAAAAGGAAAAA 57.052 28.000 0.00 0.00 0.00 1.94
1134 1140 8.066612 TCCTAATTTTTGGCCTAATTCTTCTG 57.933 34.615 3.32 0.00 0.00 3.02
1135 1141 7.893302 TCCTAATTTTTGGCCTAATTCTTCTGA 59.107 33.333 3.32 0.00 0.00 3.27
1160 1166 5.303845 TGATGATCGATTCAACCTCTGATCT 59.696 40.000 0.00 0.00 38.03 2.75
1231 1237 2.172717 AGCATAACGGCCCTATTGTTCT 59.827 45.455 0.00 0.00 0.00 3.01
1232 1238 3.389983 AGCATAACGGCCCTATTGTTCTA 59.610 43.478 0.00 0.00 0.00 2.10
1420 1427 2.463047 AACAGCTACTCTAGGGGGAG 57.537 55.000 0.00 0.00 39.09 4.30
1476 1483 9.732130 ACTATCTTTCTAGCTTCAGAATGTTTT 57.268 29.630 10.37 3.12 34.59 2.43
1576 1583 1.094785 AATGTGTCCATTAGTGCCGC 58.905 50.000 0.00 0.00 39.52 6.53
1594 1601 2.998480 TTCCAACGGCTAGGCGGA 60.998 61.111 37.39 24.36 33.14 5.54
1672 1679 2.559668 CCGGTACTAAAGTGAGTGGTGA 59.440 50.000 0.00 0.00 0.00 4.02
1690 1697 3.432326 GGTGATAGGATGTTGTCAGTCCC 60.432 52.174 0.00 0.00 32.31 4.46
1697 1704 4.974438 TTGTCAGTCCCGGGCCCT 62.974 66.667 22.43 11.63 0.00 5.19
1775 1782 2.995574 CCCTTCGTCCACCCGAGT 60.996 66.667 0.00 0.00 38.23 4.18
1777 1784 1.370064 CCTTCGTCCACCCGAGTTT 59.630 57.895 0.00 0.00 38.23 2.66
1935 1944 6.915544 TGTCATTTCATCTCTCATTGCTAC 57.084 37.500 0.00 0.00 0.00 3.58
2100 2109 2.317530 AGTGCCTTCTAAATCTCCGC 57.682 50.000 0.00 0.00 0.00 5.54
2110 2119 0.392060 AAATCTCCGCCGTAACCACC 60.392 55.000 0.00 0.00 0.00 4.61
2111 2120 2.567564 AATCTCCGCCGTAACCACCG 62.568 60.000 0.00 0.00 0.00 4.94
2112 2121 4.060038 CTCCGCCGTAACCACCGT 62.060 66.667 0.00 0.00 0.00 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.290605 AGCAAATTTGAAAATGCACCTAAGT 58.709 32.000 22.31 0.00 0.00 2.24
14 15 6.790285 AGCAAATTTGAAAATGCACCTAAG 57.210 33.333 22.31 0.00 0.00 2.18
15 16 7.387397 CCTTAGCAAATTTGAAAATGCACCTAA 59.613 33.333 22.31 13.60 0.00 2.69
16 17 6.873076 CCTTAGCAAATTTGAAAATGCACCTA 59.127 34.615 22.31 7.24 0.00 3.08
17 18 5.702209 CCTTAGCAAATTTGAAAATGCACCT 59.298 36.000 22.31 8.17 0.00 4.00
18 19 5.700373 TCCTTAGCAAATTTGAAAATGCACC 59.300 36.000 22.31 0.63 0.00 5.01
19 20 6.783892 TCCTTAGCAAATTTGAAAATGCAC 57.216 33.333 22.31 1.35 0.00 4.57
20 21 6.427547 CCTTCCTTAGCAAATTTGAAAATGCA 59.572 34.615 22.31 0.00 0.00 3.96
21 22 6.427853 ACCTTCCTTAGCAAATTTGAAAATGC 59.572 34.615 22.31 5.88 0.00 3.56
22 23 7.967890 ACCTTCCTTAGCAAATTTGAAAATG 57.032 32.000 22.31 11.04 0.00 2.32
23 24 9.710900 CTTACCTTCCTTAGCAAATTTGAAAAT 57.289 29.630 22.31 6.62 0.00 1.82
24 25 7.655732 GCTTACCTTCCTTAGCAAATTTGAAAA 59.344 33.333 22.31 12.82 33.88 2.29
25 26 7.151976 GCTTACCTTCCTTAGCAAATTTGAAA 58.848 34.615 22.31 13.15 33.88 2.69
26 27 6.266558 TGCTTACCTTCCTTAGCAAATTTGAA 59.733 34.615 22.31 7.21 40.39 2.69
27 28 5.772672 TGCTTACCTTCCTTAGCAAATTTGA 59.227 36.000 22.31 0.00 40.39 2.69
28 29 6.024552 TGCTTACCTTCCTTAGCAAATTTG 57.975 37.500 14.03 14.03 40.39 2.32
29 30 6.010219 TCTGCTTACCTTCCTTAGCAAATTT 58.990 36.000 0.00 0.00 42.49 1.82
30 31 5.570320 TCTGCTTACCTTCCTTAGCAAATT 58.430 37.500 0.00 0.00 42.49 1.82
31 32 5.179452 TCTGCTTACCTTCCTTAGCAAAT 57.821 39.130 0.00 0.00 42.49 2.32
32 33 4.565652 CCTCTGCTTACCTTCCTTAGCAAA 60.566 45.833 0.00 0.00 42.49 3.68
33 34 3.055094 CCTCTGCTTACCTTCCTTAGCAA 60.055 47.826 0.00 0.00 42.49 3.91
34 35 2.501723 CCTCTGCTTACCTTCCTTAGCA 59.498 50.000 0.00 0.00 41.01 3.49
35 36 2.766828 TCCTCTGCTTACCTTCCTTAGC 59.233 50.000 0.00 0.00 0.00 3.09
36 37 4.098807 GTCTCCTCTGCTTACCTTCCTTAG 59.901 50.000 0.00 0.00 0.00 2.18
37 38 4.024670 GTCTCCTCTGCTTACCTTCCTTA 58.975 47.826 0.00 0.00 0.00 2.69
38 39 2.835156 GTCTCCTCTGCTTACCTTCCTT 59.165 50.000 0.00 0.00 0.00 3.36
39 40 2.462723 GTCTCCTCTGCTTACCTTCCT 58.537 52.381 0.00 0.00 0.00 3.36
40 41 1.135333 CGTCTCCTCTGCTTACCTTCC 59.865 57.143 0.00 0.00 0.00 3.46
41 42 2.093106 TCGTCTCCTCTGCTTACCTTC 58.907 52.381 0.00 0.00 0.00 3.46
42 43 2.217510 TCGTCTCCTCTGCTTACCTT 57.782 50.000 0.00 0.00 0.00 3.50
43 44 2.217510 TTCGTCTCCTCTGCTTACCT 57.782 50.000 0.00 0.00 0.00 3.08
44 45 3.528597 ATTTCGTCTCCTCTGCTTACC 57.471 47.619 0.00 0.00 0.00 2.85
45 46 3.619038 CCAATTTCGTCTCCTCTGCTTAC 59.381 47.826 0.00 0.00 0.00 2.34
46 47 3.260884 ACCAATTTCGTCTCCTCTGCTTA 59.739 43.478 0.00 0.00 0.00 3.09
47 48 2.039084 ACCAATTTCGTCTCCTCTGCTT 59.961 45.455 0.00 0.00 0.00 3.91
48 49 1.625818 ACCAATTTCGTCTCCTCTGCT 59.374 47.619 0.00 0.00 0.00 4.24
49 50 2.100605 ACCAATTTCGTCTCCTCTGC 57.899 50.000 0.00 0.00 0.00 4.26
50 51 3.433615 GTGAACCAATTTCGTCTCCTCTG 59.566 47.826 0.00 0.00 36.97 3.35
51 52 3.071023 TGTGAACCAATTTCGTCTCCTCT 59.929 43.478 0.00 0.00 36.97 3.69
52 53 3.399330 TGTGAACCAATTTCGTCTCCTC 58.601 45.455 0.00 0.00 36.97 3.71
53 54 3.485463 TGTGAACCAATTTCGTCTCCT 57.515 42.857 0.00 0.00 36.97 3.69
54 55 4.766404 ATTGTGAACCAATTTCGTCTCC 57.234 40.909 0.00 0.00 41.01 3.71
63 64 8.694581 ATTGGAAATGAAAATTGTGAACCAAT 57.305 26.923 0.00 0.00 45.81 3.16
64 65 9.618890 TTATTGGAAATGAAAATTGTGAACCAA 57.381 25.926 0.00 0.00 37.91 3.67
65 66 9.618890 TTTATTGGAAATGAAAATTGTGAACCA 57.381 25.926 0.00 0.00 0.00 3.67
66 67 9.877137 GTTTATTGGAAATGAAAATTGTGAACC 57.123 29.630 0.00 0.00 0.00 3.62
71 72 9.829507 TGTCAGTTTATTGGAAATGAAAATTGT 57.170 25.926 0.00 0.00 35.67 2.71
91 92 9.956720 CAGATTTCTGTTTTAAAGATTGTCAGT 57.043 29.630 0.00 0.00 39.09 3.41
109 110 9.841295 TTGGTAGTAACTTTGTAACAGATTTCT 57.159 29.630 0.00 0.00 0.00 2.52
112 113 9.623000 ACTTTGGTAGTAACTTTGTAACAGATT 57.377 29.630 0.00 0.00 34.56 2.40
114 115 9.754382 CTACTTTGGTAGTAACTTTGTAACAGA 57.246 33.333 0.00 0.00 38.84 3.41
115 116 8.493547 GCTACTTTGGTAGTAACTTTGTAACAG 58.506 37.037 5.30 0.00 45.18 3.16
116 117 7.986320 TGCTACTTTGGTAGTAACTTTGTAACA 59.014 33.333 5.30 0.00 45.18 2.41
117 118 8.369218 TGCTACTTTGGTAGTAACTTTGTAAC 57.631 34.615 5.30 0.00 45.18 2.50
118 119 9.211485 GATGCTACTTTGGTAGTAACTTTGTAA 57.789 33.333 5.30 0.00 45.18 2.41
119 120 7.820872 GGATGCTACTTTGGTAGTAACTTTGTA 59.179 37.037 5.30 0.00 45.18 2.41
120 121 6.653740 GGATGCTACTTTGGTAGTAACTTTGT 59.346 38.462 5.30 0.00 45.18 2.83
121 122 6.879458 AGGATGCTACTTTGGTAGTAACTTTG 59.121 38.462 5.30 0.00 45.18 2.77
122 123 6.879458 CAGGATGCTACTTTGGTAGTAACTTT 59.121 38.462 5.30 0.00 45.18 2.66
123 124 6.212791 TCAGGATGCTACTTTGGTAGTAACTT 59.787 38.462 5.30 0.00 45.18 2.66
124 125 5.720041 TCAGGATGCTACTTTGGTAGTAACT 59.280 40.000 5.30 2.08 45.18 2.24
125 126 5.974108 TCAGGATGCTACTTTGGTAGTAAC 58.026 41.667 5.30 0.43 45.18 2.50
126 127 6.808321 ATCAGGATGCTACTTTGGTAGTAA 57.192 37.500 5.30 0.00 45.18 2.24
127 128 6.808321 AATCAGGATGCTACTTTGGTAGTA 57.192 37.500 5.30 1.50 45.18 1.82
128 129 5.700402 AATCAGGATGCTACTTTGGTAGT 57.300 39.130 5.30 0.00 45.18 2.73
129 130 6.352516 AGAAATCAGGATGCTACTTTGGTAG 58.647 40.000 0.00 0.00 45.91 3.18
130 131 6.070251 TGAGAAATCAGGATGCTACTTTGGTA 60.070 38.462 0.00 0.00 34.76 3.25
131 132 5.184892 AGAAATCAGGATGCTACTTTGGT 57.815 39.130 0.00 0.00 34.76 3.67
132 133 5.188434 TGAGAAATCAGGATGCTACTTTGG 58.812 41.667 0.00 0.00 34.76 3.28
133 134 6.748333 TTGAGAAATCAGGATGCTACTTTG 57.252 37.500 0.00 0.00 34.76 2.77
134 135 6.944862 AGTTTGAGAAATCAGGATGCTACTTT 59.055 34.615 0.00 0.00 34.76 2.66
135 136 6.479884 AGTTTGAGAAATCAGGATGCTACTT 58.520 36.000 0.00 0.00 34.76 2.24
136 137 6.059787 AGTTTGAGAAATCAGGATGCTACT 57.940 37.500 0.00 0.00 34.76 2.57
137 138 6.372659 TCAAGTTTGAGAAATCAGGATGCTAC 59.627 38.462 0.00 0.00 31.58 3.58
138 139 6.475504 TCAAGTTTGAGAAATCAGGATGCTA 58.524 36.000 0.00 0.00 31.58 3.49
139 140 5.319453 TCAAGTTTGAGAAATCAGGATGCT 58.681 37.500 0.00 0.00 31.58 3.79
140 141 5.633830 TCAAGTTTGAGAAATCAGGATGC 57.366 39.130 0.00 0.00 31.58 3.91
141 142 6.091437 GCTTCAAGTTTGAGAAATCAGGATG 58.909 40.000 0.00 0.00 38.61 3.51
142 143 5.106396 CGCTTCAAGTTTGAGAAATCAGGAT 60.106 40.000 0.00 0.00 38.61 3.24
143 144 4.214119 CGCTTCAAGTTTGAGAAATCAGGA 59.786 41.667 0.00 0.00 38.61 3.86
144 145 4.023707 ACGCTTCAAGTTTGAGAAATCAGG 60.024 41.667 0.00 0.00 38.61 3.86
145 146 5.100751 ACGCTTCAAGTTTGAGAAATCAG 57.899 39.130 0.00 0.00 38.61 2.90
146 147 6.612247 TTACGCTTCAAGTTTGAGAAATCA 57.388 33.333 0.00 0.00 38.61 2.57
147 148 8.420189 CAATTTACGCTTCAAGTTTGAGAAATC 58.580 33.333 0.00 0.00 38.61 2.17
148 149 7.920682 ACAATTTACGCTTCAAGTTTGAGAAAT 59.079 29.630 0.00 0.00 38.61 2.17
149 150 7.254852 ACAATTTACGCTTCAAGTTTGAGAAA 58.745 30.769 0.00 0.00 38.61 2.52
150 151 6.791303 ACAATTTACGCTTCAAGTTTGAGAA 58.209 32.000 0.00 0.00 38.61 2.87
151 152 6.371809 ACAATTTACGCTTCAAGTTTGAGA 57.628 33.333 0.00 0.00 38.61 3.27
152 153 6.472163 ACAACAATTTACGCTTCAAGTTTGAG 59.528 34.615 0.00 0.00 38.61 3.02
153 154 6.326375 ACAACAATTTACGCTTCAAGTTTGA 58.674 32.000 0.00 0.00 34.92 2.69
154 155 6.567769 ACAACAATTTACGCTTCAAGTTTG 57.432 33.333 0.00 0.00 0.00 2.93
155 156 8.865590 ATAACAACAATTTACGCTTCAAGTTT 57.134 26.923 0.00 0.00 0.00 2.66
156 157 8.865590 AATAACAACAATTTACGCTTCAAGTT 57.134 26.923 0.00 0.00 0.00 2.66
157 158 8.865590 AAATAACAACAATTTACGCTTCAAGT 57.134 26.923 0.00 0.00 0.00 3.16
158 159 8.963130 TGAAATAACAACAATTTACGCTTCAAG 58.037 29.630 0.00 0.00 0.00 3.02
159 160 8.858003 TGAAATAACAACAATTTACGCTTCAA 57.142 26.923 0.00 0.00 0.00 2.69
160 161 8.858003 TTGAAATAACAACAATTTACGCTTCA 57.142 26.923 0.00 0.00 0.00 3.02
161 162 9.176181 TCTTGAAATAACAACAATTTACGCTTC 57.824 29.630 0.00 0.00 0.00 3.86
162 163 9.691362 ATCTTGAAATAACAACAATTTACGCTT 57.309 25.926 0.00 0.00 0.00 4.68
163 164 9.128107 CATCTTGAAATAACAACAATTTACGCT 57.872 29.630 0.00 0.00 0.00 5.07
164 165 7.892731 GCATCTTGAAATAACAACAATTTACGC 59.107 33.333 0.00 0.00 0.00 4.42
165 166 8.910666 TGCATCTTGAAATAACAACAATTTACG 58.089 29.630 0.00 0.00 0.00 3.18
171 172 8.871862 GCATTATGCATCTTGAAATAACAACAA 58.128 29.630 12.80 0.00 44.26 2.83
172 173 8.410030 GCATTATGCATCTTGAAATAACAACA 57.590 30.769 12.80 0.00 44.26 3.33
189 190 3.970610 CGCAGTAACTTCATGCATTATGC 59.029 43.478 10.65 10.65 45.29 3.14
190 191 4.273235 TCCGCAGTAACTTCATGCATTATG 59.727 41.667 0.00 0.00 39.97 1.90
191 192 4.273480 GTCCGCAGTAACTTCATGCATTAT 59.727 41.667 0.00 0.00 39.97 1.28
192 193 3.621268 GTCCGCAGTAACTTCATGCATTA 59.379 43.478 0.00 0.00 39.97 1.90
193 194 2.420022 GTCCGCAGTAACTTCATGCATT 59.580 45.455 0.00 0.00 39.97 3.56
194 195 2.009774 GTCCGCAGTAACTTCATGCAT 58.990 47.619 0.00 0.00 39.97 3.96
195 196 1.270571 TGTCCGCAGTAACTTCATGCA 60.271 47.619 0.00 0.00 39.97 3.96
196 197 1.438651 TGTCCGCAGTAACTTCATGC 58.561 50.000 0.00 0.00 36.60 4.06
197 198 4.481930 TTTTGTCCGCAGTAACTTCATG 57.518 40.909 0.00 0.00 0.00 3.07
198 199 5.240623 TCAATTTTGTCCGCAGTAACTTCAT 59.759 36.000 0.00 0.00 0.00 2.57
199 200 4.576873 TCAATTTTGTCCGCAGTAACTTCA 59.423 37.500 0.00 0.00 0.00 3.02
200 201 4.909880 GTCAATTTTGTCCGCAGTAACTTC 59.090 41.667 0.00 0.00 0.00 3.01
201 202 4.336993 TGTCAATTTTGTCCGCAGTAACTT 59.663 37.500 0.00 0.00 0.00 2.66
202 203 3.880490 TGTCAATTTTGTCCGCAGTAACT 59.120 39.130 0.00 0.00 0.00 2.24
203 204 4.217754 TGTCAATTTTGTCCGCAGTAAC 57.782 40.909 0.00 0.00 0.00 2.50
204 205 3.304391 GCTGTCAATTTTGTCCGCAGTAA 60.304 43.478 0.00 0.00 0.00 2.24
205 206 2.225491 GCTGTCAATTTTGTCCGCAGTA 59.775 45.455 0.00 0.00 0.00 2.74
206 207 1.001378 GCTGTCAATTTTGTCCGCAGT 60.001 47.619 0.00 0.00 0.00 4.40
207 208 1.001487 TGCTGTCAATTTTGTCCGCAG 60.001 47.619 3.41 0.00 0.00 5.18
208 209 1.028130 TGCTGTCAATTTTGTCCGCA 58.972 45.000 3.41 3.41 0.00 5.69
209 210 1.987770 CATGCTGTCAATTTTGTCCGC 59.012 47.619 0.00 0.00 0.00 5.54
210 211 3.287312 ACATGCTGTCAATTTTGTCCG 57.713 42.857 0.00 0.00 0.00 4.79
211 212 5.953183 TGATACATGCTGTCAATTTTGTCC 58.047 37.500 0.00 0.00 0.00 4.02
212 213 6.615088 ACTGATACATGCTGTCAATTTTGTC 58.385 36.000 0.00 0.00 0.00 3.18
213 214 6.579666 ACTGATACATGCTGTCAATTTTGT 57.420 33.333 0.00 0.00 0.00 2.83
214 215 7.859377 GGATACTGATACATGCTGTCAATTTTG 59.141 37.037 0.00 0.00 0.00 2.44
215 216 7.557358 TGGATACTGATACATGCTGTCAATTTT 59.443 33.333 0.00 0.00 37.61 1.82
216 217 7.056006 TGGATACTGATACATGCTGTCAATTT 58.944 34.615 0.00 0.00 37.61 1.82
217 218 6.594744 TGGATACTGATACATGCTGTCAATT 58.405 36.000 0.00 0.00 37.61 2.32
218 219 6.178607 TGGATACTGATACATGCTGTCAAT 57.821 37.500 0.00 0.00 37.61 2.57
219 220 5.612725 TGGATACTGATACATGCTGTCAA 57.387 39.130 0.00 0.00 37.61 3.18
220 221 5.359756 GTTGGATACTGATACATGCTGTCA 58.640 41.667 0.00 0.00 37.61 3.58
221 222 4.752101 GGTTGGATACTGATACATGCTGTC 59.248 45.833 0.00 0.00 37.61 3.51
222 223 4.708177 GGTTGGATACTGATACATGCTGT 58.292 43.478 0.00 0.00 37.61 4.40
223 224 3.742882 CGGTTGGATACTGATACATGCTG 59.257 47.826 0.00 0.00 34.90 4.41
224 225 3.388024 ACGGTTGGATACTGATACATGCT 59.612 43.478 0.00 0.00 36.57 3.79
225 226 3.728845 ACGGTTGGATACTGATACATGC 58.271 45.455 0.00 0.00 36.57 4.06
226 227 7.655732 TGATTTACGGTTGGATACTGATACATG 59.344 37.037 0.00 0.00 36.57 3.21
227 228 7.732025 TGATTTACGGTTGGATACTGATACAT 58.268 34.615 0.00 0.00 36.57 2.29
228 229 7.114866 TGATTTACGGTTGGATACTGATACA 57.885 36.000 0.00 0.00 36.57 2.29
229 230 7.307219 GCTTGATTTACGGTTGGATACTGATAC 60.307 40.741 0.00 0.00 36.57 2.24
230 231 6.704493 GCTTGATTTACGGTTGGATACTGATA 59.296 38.462 0.00 0.00 36.57 2.15
231 232 5.527582 GCTTGATTTACGGTTGGATACTGAT 59.472 40.000 0.00 0.00 36.57 2.90
232 233 4.873827 GCTTGATTTACGGTTGGATACTGA 59.126 41.667 0.00 0.00 36.57 3.41
233 234 4.634004 TGCTTGATTTACGGTTGGATACTG 59.366 41.667 0.00 0.00 39.17 2.74
234 235 4.839121 TGCTTGATTTACGGTTGGATACT 58.161 39.130 0.00 0.00 37.61 2.12
235 236 5.751243 ATGCTTGATTTACGGTTGGATAC 57.249 39.130 0.00 0.00 0.00 2.24
236 237 6.822442 TCTATGCTTGATTTACGGTTGGATA 58.178 36.000 0.00 0.00 0.00 2.59
237 238 5.680619 TCTATGCTTGATTTACGGTTGGAT 58.319 37.500 0.00 0.00 0.00 3.41
238 239 5.092554 TCTATGCTTGATTTACGGTTGGA 57.907 39.130 0.00 0.00 0.00 3.53
239 240 5.811399 TTCTATGCTTGATTTACGGTTGG 57.189 39.130 0.00 0.00 0.00 3.77
240 241 7.807907 AGTTTTTCTATGCTTGATTTACGGTTG 59.192 33.333 0.00 0.00 0.00 3.77
241 242 7.882179 AGTTTTTCTATGCTTGATTTACGGTT 58.118 30.769 0.00 0.00 0.00 4.44
242 243 7.448748 AGTTTTTCTATGCTTGATTTACGGT 57.551 32.000 0.00 0.00 0.00 4.83
243 244 7.640240 GCTAGTTTTTCTATGCTTGATTTACGG 59.360 37.037 0.00 0.00 0.00 4.02
244 245 8.175069 TGCTAGTTTTTCTATGCTTGATTTACG 58.825 33.333 0.00 0.00 0.00 3.18
249 250 9.177608 TGTAATGCTAGTTTTTCTATGCTTGAT 57.822 29.630 0.00 0.00 0.00 2.57
250 251 8.560355 TGTAATGCTAGTTTTTCTATGCTTGA 57.440 30.769 0.00 0.00 0.00 3.02
251 252 8.668353 TCTGTAATGCTAGTTTTTCTATGCTTG 58.332 33.333 0.00 0.00 0.00 4.01
252 253 8.669243 GTCTGTAATGCTAGTTTTTCTATGCTT 58.331 33.333 0.00 0.00 0.00 3.91
253 254 8.043710 AGTCTGTAATGCTAGTTTTTCTATGCT 58.956 33.333 0.00 0.00 0.00 3.79
254 255 8.202745 AGTCTGTAATGCTAGTTTTTCTATGC 57.797 34.615 0.00 0.00 0.00 3.14
258 259 9.209175 CAGTTAGTCTGTAATGCTAGTTTTTCT 57.791 33.333 0.00 0.00 39.17 2.52
259 260 9.204570 TCAGTTAGTCTGTAATGCTAGTTTTTC 57.795 33.333 0.00 0.00 43.97 2.29
260 261 9.209175 CTCAGTTAGTCTGTAATGCTAGTTTTT 57.791 33.333 0.00 0.00 43.97 1.94
261 262 7.819900 CCTCAGTTAGTCTGTAATGCTAGTTTT 59.180 37.037 0.00 0.00 43.97 2.43
262 263 7.178628 TCCTCAGTTAGTCTGTAATGCTAGTTT 59.821 37.037 0.00 0.00 43.97 2.66
263 264 6.663953 TCCTCAGTTAGTCTGTAATGCTAGTT 59.336 38.462 0.00 0.00 43.97 2.24
264 265 6.188407 TCCTCAGTTAGTCTGTAATGCTAGT 58.812 40.000 0.00 0.00 43.97 2.57
265 266 6.701145 TCCTCAGTTAGTCTGTAATGCTAG 57.299 41.667 0.00 0.00 43.97 3.42
266 267 7.124298 ACATTCCTCAGTTAGTCTGTAATGCTA 59.876 37.037 13.87 0.00 43.97 3.49
267 268 6.070538 ACATTCCTCAGTTAGTCTGTAATGCT 60.071 38.462 13.87 0.00 43.97 3.79
268 269 6.109359 ACATTCCTCAGTTAGTCTGTAATGC 58.891 40.000 13.87 0.00 43.97 3.56
269 270 7.278868 GGAACATTCCTCAGTTAGTCTGTAATG 59.721 40.741 3.24 13.10 44.11 1.90
270 271 7.331791 GGAACATTCCTCAGTTAGTCTGTAAT 58.668 38.462 3.24 0.00 44.11 1.89
271 272 6.295688 GGGAACATTCCTCAGTTAGTCTGTAA 60.296 42.308 10.45 0.00 46.72 2.41
272 273 5.187186 GGGAACATTCCTCAGTTAGTCTGTA 59.813 44.000 10.45 0.00 46.72 2.74
273 274 4.020128 GGGAACATTCCTCAGTTAGTCTGT 60.020 45.833 10.45 0.00 46.72 3.41
274 275 4.020218 TGGGAACATTCCTCAGTTAGTCTG 60.020 45.833 10.45 0.00 46.72 3.51
275 276 4.168101 TGGGAACATTCCTCAGTTAGTCT 58.832 43.478 10.45 0.00 46.72 3.24
276 277 4.020128 ACTGGGAACATTCCTCAGTTAGTC 60.020 45.833 20.36 1.60 46.93 2.59
277 278 3.910627 ACTGGGAACATTCCTCAGTTAGT 59.089 43.478 20.36 10.11 46.93 2.24
278 279 4.559862 ACTGGGAACATTCCTCAGTTAG 57.440 45.455 20.36 9.67 46.93 2.34
282 283 3.754965 TCAAACTGGGAACATTCCTCAG 58.245 45.455 19.46 19.46 46.72 3.35
283 284 3.874383 TCAAACTGGGAACATTCCTCA 57.126 42.857 10.45 6.21 46.72 3.86
284 285 5.529581 TTTTCAAACTGGGAACATTCCTC 57.470 39.130 10.45 2.01 46.72 3.71
285 286 5.948742 TTTTTCAAACTGGGAACATTCCT 57.051 34.783 10.45 0.00 46.72 3.36
314 315 4.278419 ACATTCCTGCTGGTTGTTTCTAAC 59.722 41.667 9.73 0.00 30.63 2.34
315 316 4.278170 CACATTCCTGCTGGTTGTTTCTAA 59.722 41.667 9.73 0.00 31.78 2.10
316 317 3.820467 CACATTCCTGCTGGTTGTTTCTA 59.180 43.478 9.73 0.00 31.78 2.10
317 318 2.624838 CACATTCCTGCTGGTTGTTTCT 59.375 45.455 9.73 0.00 31.78 2.52
318 319 2.863704 GCACATTCCTGCTGGTTGTTTC 60.864 50.000 9.73 5.86 34.06 2.78
319 320 1.069049 GCACATTCCTGCTGGTTGTTT 59.931 47.619 9.73 0.00 34.06 2.83
320 321 0.675633 GCACATTCCTGCTGGTTGTT 59.324 50.000 9.73 0.00 34.06 2.83
321 322 0.467844 TGCACATTCCTGCTGGTTGT 60.468 50.000 9.73 11.51 38.07 3.32
322 323 0.675083 TTGCACATTCCTGCTGGTTG 59.325 50.000 9.73 10.91 38.07 3.77
323 324 0.675633 GTTGCACATTCCTGCTGGTT 59.324 50.000 9.73 0.00 38.07 3.67
324 325 0.467844 TGTTGCACATTCCTGCTGGT 60.468 50.000 9.73 0.00 38.07 4.00
325 326 0.892755 ATGTTGCACATTCCTGCTGG 59.107 50.000 2.58 2.58 34.67 4.85
326 327 4.142337 TGAATATGTTGCACATTCCTGCTG 60.142 41.667 7.02 0.00 39.88 4.41
327 328 4.018490 TGAATATGTTGCACATTCCTGCT 58.982 39.130 7.02 0.00 39.88 4.24
328 329 4.374843 TGAATATGTTGCACATTCCTGC 57.625 40.909 7.02 0.00 39.88 4.85
329 330 5.068067 TGGATGAATATGTTGCACATTCCTG 59.932 40.000 7.02 0.00 39.88 3.86
330 331 5.202765 TGGATGAATATGTTGCACATTCCT 58.797 37.500 7.02 0.00 39.88 3.36
331 332 5.518848 TGGATGAATATGTTGCACATTCC 57.481 39.130 7.02 7.98 39.88 3.01
332 333 7.204604 TCAATGGATGAATATGTTGCACATTC 58.795 34.615 7.02 5.22 36.16 2.67
333 334 7.114866 TCAATGGATGAATATGTTGCACATT 57.885 32.000 7.02 0.00 36.16 2.71
334 335 6.718522 TCAATGGATGAATATGTTGCACAT 57.281 33.333 6.93 6.93 37.59 3.21
335 336 6.718522 ATCAATGGATGAATATGTTGCACA 57.281 33.333 0.00 0.00 42.54 4.57
336 337 9.531942 TTTAATCAATGGATGAATATGTTGCAC 57.468 29.630 0.00 0.00 42.54 4.57
363 364 9.319143 GCAGATCACTTGTGTTATTTATAGAGT 57.681 33.333 0.00 0.00 0.00 3.24
364 365 9.539825 AGCAGATCACTTGTGTTATTTATAGAG 57.460 33.333 0.00 0.00 0.00 2.43
365 366 9.534565 GAGCAGATCACTTGTGTTATTTATAGA 57.465 33.333 0.00 0.00 0.00 1.98
366 367 9.317936 TGAGCAGATCACTTGTGTTATTTATAG 57.682 33.333 0.00 0.00 31.12 1.31
367 368 9.665719 TTGAGCAGATCACTTGTGTTATTTATA 57.334 29.630 0.00 0.00 37.77 0.98
368 369 8.454106 GTTGAGCAGATCACTTGTGTTATTTAT 58.546 33.333 0.00 0.00 37.77 1.40
369 370 7.094805 GGTTGAGCAGATCACTTGTGTTATTTA 60.095 37.037 0.00 0.00 37.77 1.40
370 371 6.294176 GGTTGAGCAGATCACTTGTGTTATTT 60.294 38.462 0.00 0.00 37.77 1.40
371 372 5.182001 GGTTGAGCAGATCACTTGTGTTATT 59.818 40.000 0.00 0.00 37.77 1.40
372 373 4.697352 GGTTGAGCAGATCACTTGTGTTAT 59.303 41.667 0.00 0.00 37.77 1.89
373 374 4.065088 GGTTGAGCAGATCACTTGTGTTA 58.935 43.478 0.00 0.00 37.77 2.41
374 375 2.880890 GGTTGAGCAGATCACTTGTGTT 59.119 45.455 0.00 0.00 37.77 3.32
375 376 2.158769 TGGTTGAGCAGATCACTTGTGT 60.159 45.455 0.00 0.00 37.77 3.72
376 377 2.497138 TGGTTGAGCAGATCACTTGTG 58.503 47.619 0.00 0.00 37.77 3.33
377 378 2.936919 TGGTTGAGCAGATCACTTGT 57.063 45.000 0.00 0.00 37.77 3.16
378 379 3.128242 GGATTGGTTGAGCAGATCACTTG 59.872 47.826 0.00 0.00 37.77 3.16
379 380 3.245016 TGGATTGGTTGAGCAGATCACTT 60.245 43.478 0.00 0.00 37.77 3.16
380 381 2.306805 TGGATTGGTTGAGCAGATCACT 59.693 45.455 0.00 0.00 37.77 3.41
381 382 2.715046 TGGATTGGTTGAGCAGATCAC 58.285 47.619 0.00 0.00 37.77 3.06
382 383 3.657398 ATGGATTGGTTGAGCAGATCA 57.343 42.857 0.00 0.00 35.62 2.92
383 384 5.128919 AGTTATGGATTGGTTGAGCAGATC 58.871 41.667 0.00 0.00 0.00 2.75
384 385 5.121380 AGTTATGGATTGGTTGAGCAGAT 57.879 39.130 0.00 0.00 0.00 2.90
385 386 4.574674 AGTTATGGATTGGTTGAGCAGA 57.425 40.909 0.00 0.00 0.00 4.26
386 387 4.576463 GGTAGTTATGGATTGGTTGAGCAG 59.424 45.833 0.00 0.00 0.00 4.24
387 388 4.523083 GGTAGTTATGGATTGGTTGAGCA 58.477 43.478 0.00 0.00 0.00 4.26
388 389 3.883489 GGGTAGTTATGGATTGGTTGAGC 59.117 47.826 0.00 0.00 0.00 4.26
389 390 5.373812 AGGGTAGTTATGGATTGGTTGAG 57.626 43.478 0.00 0.00 0.00 3.02
390 391 5.789574 AAGGGTAGTTATGGATTGGTTGA 57.210 39.130 0.00 0.00 0.00 3.18
391 392 5.714806 ACAAAGGGTAGTTATGGATTGGTTG 59.285 40.000 0.00 0.00 0.00 3.77
392 393 5.714806 CACAAAGGGTAGTTATGGATTGGTT 59.285 40.000 0.00 0.00 0.00 3.67
393 394 5.222254 ACACAAAGGGTAGTTATGGATTGGT 60.222 40.000 0.00 0.00 0.00 3.67
394 395 5.125417 CACACAAAGGGTAGTTATGGATTGG 59.875 44.000 0.00 0.00 0.00 3.16
395 396 5.710099 ACACACAAAGGGTAGTTATGGATTG 59.290 40.000 0.00 0.00 26.29 2.67
396 397 5.887754 ACACACAAAGGGTAGTTATGGATT 58.112 37.500 0.00 0.00 26.29 3.01
397 398 5.514500 ACACACAAAGGGTAGTTATGGAT 57.486 39.130 0.00 0.00 26.29 3.41
398 399 4.986054 ACACACAAAGGGTAGTTATGGA 57.014 40.909 0.00 0.00 26.29 3.41
399 400 6.399639 AAAACACACAAAGGGTAGTTATGG 57.600 37.500 0.00 0.00 29.80 2.74
400 401 8.626526 AGTAAAAACACACAAAGGGTAGTTATG 58.373 33.333 0.00 0.00 29.80 1.90
401 402 8.756486 AGTAAAAACACACAAAGGGTAGTTAT 57.244 30.769 0.00 0.00 29.80 1.89
402 403 8.578448 AAGTAAAAACACACAAAGGGTAGTTA 57.422 30.769 0.00 0.00 29.80 2.24
403 404 7.470935 AAGTAAAAACACACAAAGGGTAGTT 57.529 32.000 0.00 0.00 29.80 2.24
404 405 7.317390 CAAAGTAAAAACACACAAAGGGTAGT 58.683 34.615 0.00 0.00 29.80 2.73
405 406 6.754675 CCAAAGTAAAAACACACAAAGGGTAG 59.245 38.462 0.00 0.00 29.80 3.18
406 407 6.631962 CCAAAGTAAAAACACACAAAGGGTA 58.368 36.000 0.00 0.00 29.80 3.69
407 408 5.483811 CCAAAGTAAAAACACACAAAGGGT 58.516 37.500 0.00 0.00 32.92 4.34
408 409 4.331443 GCCAAAGTAAAAACACACAAAGGG 59.669 41.667 0.00 0.00 0.00 3.95
409 410 4.331443 GGCCAAAGTAAAAACACACAAAGG 59.669 41.667 0.00 0.00 0.00 3.11
410 411 4.932200 TGGCCAAAGTAAAAACACACAAAG 59.068 37.500 0.61 0.00 0.00 2.77
411 412 4.894784 TGGCCAAAGTAAAAACACACAAA 58.105 34.783 0.61 0.00 0.00 2.83
412 413 4.537135 TGGCCAAAGTAAAAACACACAA 57.463 36.364 0.61 0.00 0.00 3.33
413 414 4.744795 ATGGCCAAAGTAAAAACACACA 57.255 36.364 10.96 0.00 0.00 3.72
414 415 6.254480 CAAAATGGCCAAAGTAAAAACACAC 58.746 36.000 10.96 0.00 0.00 3.82
415 416 5.163713 GCAAAATGGCCAAAGTAAAAACACA 60.164 36.000 10.96 0.00 0.00 3.72
416 417 5.270083 GCAAAATGGCCAAAGTAAAAACAC 58.730 37.500 10.96 0.00 0.00 3.32
417 418 4.034510 CGCAAAATGGCCAAAGTAAAAACA 59.965 37.500 10.96 0.00 0.00 2.83
418 419 4.034626 ACGCAAAATGGCCAAAGTAAAAAC 59.965 37.500 10.96 0.00 0.00 2.43
419 420 4.192317 ACGCAAAATGGCCAAAGTAAAAA 58.808 34.783 10.96 0.00 0.00 1.94
420 421 3.798202 ACGCAAAATGGCCAAAGTAAAA 58.202 36.364 10.96 0.00 0.00 1.52
421 422 3.385577 GACGCAAAATGGCCAAAGTAAA 58.614 40.909 10.96 0.00 0.00 2.01
422 423 2.288518 GGACGCAAAATGGCCAAAGTAA 60.289 45.455 10.96 0.00 0.00 2.24
423 424 1.271102 GGACGCAAAATGGCCAAAGTA 59.729 47.619 10.96 0.00 0.00 2.24
424 425 0.033366 GGACGCAAAATGGCCAAAGT 59.967 50.000 10.96 3.43 0.00 2.66
425 426 0.033228 TGGACGCAAAATGGCCAAAG 59.967 50.000 10.96 0.32 0.00 2.77
426 427 0.465705 TTGGACGCAAAATGGCCAAA 59.534 45.000 10.96 0.00 35.82 3.28
427 428 0.683973 ATTGGACGCAAAATGGCCAA 59.316 45.000 10.96 2.27 42.23 4.52
428 429 0.683973 AATTGGACGCAAAATGGCCA 59.316 45.000 8.56 8.56 0.00 5.36
429 430 1.077915 CAATTGGACGCAAAATGGCC 58.922 50.000 0.00 0.00 0.00 5.36
430 431 1.726248 GACAATTGGACGCAAAATGGC 59.274 47.619 10.83 0.00 0.00 4.40
431 432 3.302365 AGACAATTGGACGCAAAATGG 57.698 42.857 10.83 0.00 0.00 3.16
432 433 4.150451 GGAAAGACAATTGGACGCAAAATG 59.850 41.667 10.83 0.00 0.00 2.32
433 434 4.202202 TGGAAAGACAATTGGACGCAAAAT 60.202 37.500 10.83 0.00 0.00 1.82
434 435 3.131223 TGGAAAGACAATTGGACGCAAAA 59.869 39.130 10.83 0.00 0.00 2.44
435 436 2.690497 TGGAAAGACAATTGGACGCAAA 59.310 40.909 10.83 0.00 0.00 3.68
436 437 2.302260 TGGAAAGACAATTGGACGCAA 58.698 42.857 10.83 0.00 0.00 4.85
437 438 1.974265 TGGAAAGACAATTGGACGCA 58.026 45.000 10.83 0.00 0.00 5.24
438 439 3.244976 CAATGGAAAGACAATTGGACGC 58.755 45.455 10.83 0.00 0.00 5.19
439 440 4.503741 ACAATGGAAAGACAATTGGACG 57.496 40.909 10.83 0.00 0.00 4.79
440 441 7.542130 GTCAATACAATGGAAAGACAATTGGAC 59.458 37.037 10.83 3.64 0.00 4.02
441 442 7.451255 AGTCAATACAATGGAAAGACAATTGGA 59.549 33.333 10.83 0.00 0.00 3.53
442 443 7.605449 AGTCAATACAATGGAAAGACAATTGG 58.395 34.615 10.83 0.00 0.00 3.16
446 447 9.295825 ACAATAGTCAATACAATGGAAAGACAA 57.704 29.630 3.98 0.00 0.00 3.18
447 448 8.862325 ACAATAGTCAATACAATGGAAAGACA 57.138 30.769 3.98 0.00 0.00 3.41
451 452 9.921637 GGAAAACAATAGTCAATACAATGGAAA 57.078 29.630 0.00 0.00 0.00 3.13
452 453 9.308000 AGGAAAACAATAGTCAATACAATGGAA 57.692 29.630 0.00 0.00 0.00 3.53
453 454 8.877864 AGGAAAACAATAGTCAATACAATGGA 57.122 30.769 0.00 0.00 0.00 3.41
454 455 7.910162 CGAGGAAAACAATAGTCAATACAATGG 59.090 37.037 0.00 0.00 0.00 3.16
455 456 8.664798 TCGAGGAAAACAATAGTCAATACAATG 58.335 33.333 0.00 0.00 0.00 2.82
456 457 8.786826 TCGAGGAAAACAATAGTCAATACAAT 57.213 30.769 0.00 0.00 0.00 2.71
457 458 8.786826 ATCGAGGAAAACAATAGTCAATACAA 57.213 30.769 0.00 0.00 0.00 2.41
458 459 9.878667 TTATCGAGGAAAACAATAGTCAATACA 57.121 29.630 0.00 0.00 0.00 2.29
489 490 6.587206 TGGTCAGAGATGCTCTTATATCTG 57.413 41.667 4.49 4.49 44.02 2.90
490 491 7.675195 AGATTGGTCAGAGATGCTCTTATATCT 59.325 37.037 0.00 0.00 38.99 1.98
491 492 7.839907 AGATTGGTCAGAGATGCTCTTATATC 58.160 38.462 0.00 0.00 38.99 1.63
492 493 7.675195 AGAGATTGGTCAGAGATGCTCTTATAT 59.325 37.037 0.00 0.00 38.99 0.86
493 494 7.009550 AGAGATTGGTCAGAGATGCTCTTATA 58.990 38.462 0.00 0.00 38.99 0.98
494 495 5.840149 AGAGATTGGTCAGAGATGCTCTTAT 59.160 40.000 0.00 0.00 38.99 1.73
495 496 5.207354 AGAGATTGGTCAGAGATGCTCTTA 58.793 41.667 0.00 0.00 38.99 2.10
496 497 4.032310 AGAGATTGGTCAGAGATGCTCTT 58.968 43.478 0.00 0.00 38.99 2.85
497 498 3.645434 AGAGATTGGTCAGAGATGCTCT 58.355 45.455 0.00 0.00 42.11 4.09
498 499 4.405116 AAGAGATTGGTCAGAGATGCTC 57.595 45.455 0.00 0.00 0.00 4.26
499 500 7.609097 TTATAAGAGATTGGTCAGAGATGCT 57.391 36.000 0.00 0.00 0.00 3.79
500 501 8.845413 AATTATAAGAGATTGGTCAGAGATGC 57.155 34.615 0.00 0.00 0.00 3.91
503 504 9.988815 GCTAAATTATAAGAGATTGGTCAGAGA 57.011 33.333 0.00 0.00 0.00 3.10
504 505 9.213799 GGCTAAATTATAAGAGATTGGTCAGAG 57.786 37.037 0.00 0.00 0.00 3.35
505 506 8.157476 GGGCTAAATTATAAGAGATTGGTCAGA 58.843 37.037 0.00 0.00 0.00 3.27
506 507 7.391833 GGGGCTAAATTATAAGAGATTGGTCAG 59.608 40.741 0.00 0.00 0.00 3.51
507 508 7.073725 AGGGGCTAAATTATAAGAGATTGGTCA 59.926 37.037 0.00 0.00 0.00 4.02
508 509 7.462590 AGGGGCTAAATTATAAGAGATTGGTC 58.537 38.462 0.00 0.00 0.00 4.02
509 510 7.073725 TGAGGGGCTAAATTATAAGAGATTGGT 59.926 37.037 0.00 0.00 0.00 3.67
510 511 7.461749 TGAGGGGCTAAATTATAAGAGATTGG 58.538 38.462 0.00 0.00 0.00 3.16
511 512 8.924511 TTGAGGGGCTAAATTATAAGAGATTG 57.075 34.615 0.00 0.00 0.00 2.67
512 513 9.355916 GTTTGAGGGGCTAAATTATAAGAGATT 57.644 33.333 0.00 0.00 0.00 2.40
513 514 7.661847 CGTTTGAGGGGCTAAATTATAAGAGAT 59.338 37.037 0.00 0.00 0.00 2.75
514 515 6.990349 CGTTTGAGGGGCTAAATTATAAGAGA 59.010 38.462 0.00 0.00 0.00 3.10
515 516 6.990349 TCGTTTGAGGGGCTAAATTATAAGAG 59.010 38.462 0.00 0.00 0.00 2.85
516 517 6.764560 GTCGTTTGAGGGGCTAAATTATAAGA 59.235 38.462 0.00 0.00 0.00 2.10
517 518 6.017357 GGTCGTTTGAGGGGCTAAATTATAAG 60.017 42.308 0.00 0.00 0.00 1.73
518 519 5.824097 GGTCGTTTGAGGGGCTAAATTATAA 59.176 40.000 0.00 0.00 0.00 0.98
519 520 5.370679 GGTCGTTTGAGGGGCTAAATTATA 58.629 41.667 0.00 0.00 0.00 0.98
520 521 4.204799 GGTCGTTTGAGGGGCTAAATTAT 58.795 43.478 0.00 0.00 0.00 1.28
521 522 3.613030 GGTCGTTTGAGGGGCTAAATTA 58.387 45.455 0.00 0.00 0.00 1.40
522 523 2.443416 GGTCGTTTGAGGGGCTAAATT 58.557 47.619 0.00 0.00 0.00 1.82
523 524 1.340697 GGGTCGTTTGAGGGGCTAAAT 60.341 52.381 0.00 0.00 0.00 1.40
524 525 0.037160 GGGTCGTTTGAGGGGCTAAA 59.963 55.000 0.00 0.00 0.00 1.85
525 526 1.681076 GGGTCGTTTGAGGGGCTAA 59.319 57.895 0.00 0.00 0.00 3.09
526 527 2.295602 GGGGTCGTTTGAGGGGCTA 61.296 63.158 0.00 0.00 0.00 3.93
527 528 3.647771 GGGGTCGTTTGAGGGGCT 61.648 66.667 0.00 0.00 0.00 5.19
528 529 3.961414 TGGGGTCGTTTGAGGGGC 61.961 66.667 0.00 0.00 0.00 5.80
529 530 2.033602 GTGGGGTCGTTTGAGGGG 59.966 66.667 0.00 0.00 0.00 4.79
530 531 0.466555 TTTGTGGGGTCGTTTGAGGG 60.467 55.000 0.00 0.00 0.00 4.30
531 532 0.666374 GTTTGTGGGGTCGTTTGAGG 59.334 55.000 0.00 0.00 0.00 3.86
532 533 0.666374 GGTTTGTGGGGTCGTTTGAG 59.334 55.000 0.00 0.00 0.00 3.02
533 534 0.256464 AGGTTTGTGGGGTCGTTTGA 59.744 50.000 0.00 0.00 0.00 2.69
534 535 1.107945 AAGGTTTGTGGGGTCGTTTG 58.892 50.000 0.00 0.00 0.00 2.93
535 536 2.732844 TAAGGTTTGTGGGGTCGTTT 57.267 45.000 0.00 0.00 0.00 3.60
536 537 2.732844 TTAAGGTTTGTGGGGTCGTT 57.267 45.000 0.00 0.00 0.00 3.85
537 538 2.732844 TTTAAGGTTTGTGGGGTCGT 57.267 45.000 0.00 0.00 0.00 4.34
538 539 4.594123 AAATTTAAGGTTTGTGGGGTCG 57.406 40.909 0.00 0.00 0.00 4.79
539 540 6.225318 GGTTAAATTTAAGGTTTGTGGGGTC 58.775 40.000 10.92 0.00 0.00 4.46
540 541 5.221481 CGGTTAAATTTAAGGTTTGTGGGGT 60.221 40.000 10.92 0.00 0.00 4.95
541 542 5.221481 ACGGTTAAATTTAAGGTTTGTGGGG 60.221 40.000 10.92 0.00 0.00 4.96
542 543 5.845103 ACGGTTAAATTTAAGGTTTGTGGG 58.155 37.500 10.92 0.00 0.00 4.61
543 544 7.773864 AAACGGTTAAATTTAAGGTTTGTGG 57.226 32.000 24.86 9.36 33.18 4.17
544 545 8.870879 TGAAAACGGTTAAATTTAAGGTTTGTG 58.129 29.630 25.54 10.90 33.97 3.33
545 546 8.871862 GTGAAAACGGTTAAATTTAAGGTTTGT 58.128 29.630 25.54 19.37 33.97 2.83
546 547 8.870879 TGTGAAAACGGTTAAATTTAAGGTTTG 58.129 29.630 25.54 13.06 33.97 2.93
547 548 8.871862 GTGTGAAAACGGTTAAATTTAAGGTTT 58.128 29.630 22.32 22.32 34.57 3.27
548 549 8.033626 TGTGTGAAAACGGTTAAATTTAAGGTT 58.966 29.630 10.92 14.10 0.00 3.50
549 550 7.545489 TGTGTGAAAACGGTTAAATTTAAGGT 58.455 30.769 10.92 9.33 0.00 3.50
550 551 7.988904 TGTGTGAAAACGGTTAAATTTAAGG 57.011 32.000 10.92 8.74 0.00 2.69
554 555 8.936864 TGAATTTGTGTGAAAACGGTTAAATTT 58.063 25.926 4.17 0.00 29.63 1.82
555 556 8.480643 TGAATTTGTGTGAAAACGGTTAAATT 57.519 26.923 2.56 2.56 31.45 1.82
556 557 8.655651 ATGAATTTGTGTGAAAACGGTTAAAT 57.344 26.923 0.00 0.00 0.00 1.40
557 558 8.480643 AATGAATTTGTGTGAAAACGGTTAAA 57.519 26.923 0.00 0.00 0.00 1.52
558 559 8.480643 AAATGAATTTGTGTGAAAACGGTTAA 57.519 26.923 0.00 0.00 0.00 2.01
559 560 7.759886 TGAAATGAATTTGTGTGAAAACGGTTA 59.240 29.630 0.00 0.00 0.00 2.85
560 561 6.591834 TGAAATGAATTTGTGTGAAAACGGTT 59.408 30.769 0.00 0.00 0.00 4.44
561 562 6.102663 TGAAATGAATTTGTGTGAAAACGGT 58.897 32.000 0.00 0.00 0.00 4.83
562 563 6.580963 TGAAATGAATTTGTGTGAAAACGG 57.419 33.333 0.00 0.00 0.00 4.44
563 564 7.954248 TGTTTGAAATGAATTTGTGTGAAAACG 59.046 29.630 0.00 0.00 0.00 3.60
564 565 9.049974 GTGTTTGAAATGAATTTGTGTGAAAAC 57.950 29.630 0.00 0.00 0.00 2.43
565 566 8.233190 GGTGTTTGAAATGAATTTGTGTGAAAA 58.767 29.630 0.00 0.00 0.00 2.29
566 567 7.388776 TGGTGTTTGAAATGAATTTGTGTGAAA 59.611 29.630 0.00 0.00 0.00 2.69
567 568 6.875726 TGGTGTTTGAAATGAATTTGTGTGAA 59.124 30.769 0.00 0.00 0.00 3.18
568 569 6.401394 TGGTGTTTGAAATGAATTTGTGTGA 58.599 32.000 0.00 0.00 0.00 3.58
569 570 6.659361 TGGTGTTTGAAATGAATTTGTGTG 57.341 33.333 0.00 0.00 0.00 3.82
570 571 7.862512 ATTGGTGTTTGAAATGAATTTGTGT 57.137 28.000 0.00 0.00 0.00 3.72
571 572 8.396390 TCAATTGGTGTTTGAAATGAATTTGTG 58.604 29.630 5.42 0.00 30.44 3.33
572 573 8.503458 TCAATTGGTGTTTGAAATGAATTTGT 57.497 26.923 5.42 0.00 30.44 2.83
573 574 9.784680 TTTCAATTGGTGTTTGAAATGAATTTG 57.215 25.926 5.42 0.00 44.12 2.32
609 610 8.347035 GCTACCTTTGTTTATAGTTGTGTTTGA 58.653 33.333 0.00 0.00 0.00 2.69
610 611 8.132362 TGCTACCTTTGTTTATAGTTGTGTTTG 58.868 33.333 0.00 0.00 0.00 2.93
611 612 8.132995 GTGCTACCTTTGTTTATAGTTGTGTTT 58.867 33.333 0.00 0.00 0.00 2.83
612 613 7.283580 TGTGCTACCTTTGTTTATAGTTGTGTT 59.716 33.333 0.00 0.00 0.00 3.32
613 614 6.768861 TGTGCTACCTTTGTTTATAGTTGTGT 59.231 34.615 0.00 0.00 0.00 3.72
614 615 7.197071 TGTGCTACCTTTGTTTATAGTTGTG 57.803 36.000 0.00 0.00 0.00 3.33
615 616 7.811117 TTGTGCTACCTTTGTTTATAGTTGT 57.189 32.000 0.00 0.00 0.00 3.32
618 619 9.899661 TCATATTGTGCTACCTTTGTTTATAGT 57.100 29.630 0.00 0.00 0.00 2.12
622 623 9.674068 TGTATCATATTGTGCTACCTTTGTTTA 57.326 29.630 0.00 0.00 30.21 2.01
623 624 8.574251 TGTATCATATTGTGCTACCTTTGTTT 57.426 30.769 0.00 0.00 30.21 2.83
624 625 8.752005 ATGTATCATATTGTGCTACCTTTGTT 57.248 30.769 0.00 0.00 30.21 2.83
625 626 8.623903 CAATGTATCATATTGTGCTACCTTTGT 58.376 33.333 0.00 0.00 30.21 2.83
626 627 7.592533 GCAATGTATCATATTGTGCTACCTTTG 59.407 37.037 0.00 0.08 37.73 2.77
627 628 7.285172 TGCAATGTATCATATTGTGCTACCTTT 59.715 33.333 0.00 0.00 37.73 3.11
628 629 6.772233 TGCAATGTATCATATTGTGCTACCTT 59.228 34.615 0.00 0.00 37.73 3.50
629 630 6.298361 TGCAATGTATCATATTGTGCTACCT 58.702 36.000 0.00 0.00 37.73 3.08
630 631 6.558771 TGCAATGTATCATATTGTGCTACC 57.441 37.500 0.00 0.00 37.73 3.18
631 632 9.546909 GTTATGCAATGTATCATATTGTGCTAC 57.453 33.333 0.00 0.00 37.73 3.58
632 633 9.282569 TGTTATGCAATGTATCATATTGTGCTA 57.717 29.630 0.00 0.00 37.73 3.49
633 634 8.168790 TGTTATGCAATGTATCATATTGTGCT 57.831 30.769 0.00 0.00 37.73 4.40
634 635 8.856247 CATGTTATGCAATGTATCATATTGTGC 58.144 33.333 0.00 0.00 37.73 4.57
645 646 8.344831 GCTCTATTTGTCATGTTATGCAATGTA 58.655 33.333 0.00 0.00 0.00 2.29
646 647 7.067859 AGCTCTATTTGTCATGTTATGCAATGT 59.932 33.333 0.00 0.00 0.00 2.71
647 648 7.423199 AGCTCTATTTGTCATGTTATGCAATG 58.577 34.615 0.00 0.00 0.00 2.82
648 649 7.501559 AGAGCTCTATTTGTCATGTTATGCAAT 59.498 33.333 16.50 0.00 0.00 3.56
649 650 6.825213 AGAGCTCTATTTGTCATGTTATGCAA 59.175 34.615 16.50 0.00 0.00 4.08
650 651 6.351711 AGAGCTCTATTTGTCATGTTATGCA 58.648 36.000 16.50 0.00 0.00 3.96
651 652 6.857777 AGAGCTCTATTTGTCATGTTATGC 57.142 37.500 16.50 0.00 0.00 3.14
652 653 7.130917 GCAAGAGCTCTATTTGTCATGTTATG 58.869 38.462 18.59 7.29 37.91 1.90
653 654 6.825213 TGCAAGAGCTCTATTTGTCATGTTAT 59.175 34.615 18.59 0.00 42.74 1.89
654 655 6.092670 GTGCAAGAGCTCTATTTGTCATGTTA 59.907 38.462 18.59 0.19 42.74 2.41
655 656 5.005740 TGCAAGAGCTCTATTTGTCATGTT 58.994 37.500 18.59 0.00 42.74 2.71
656 657 4.394300 GTGCAAGAGCTCTATTTGTCATGT 59.606 41.667 18.59 0.00 42.74 3.21
657 658 4.393990 TGTGCAAGAGCTCTATTTGTCATG 59.606 41.667 18.59 10.05 42.74 3.07
658 659 4.582869 TGTGCAAGAGCTCTATTTGTCAT 58.417 39.130 18.59 0.00 42.74 3.06
659 660 4.006780 TGTGCAAGAGCTCTATTTGTCA 57.993 40.909 18.59 11.09 42.74 3.58
660 661 5.557891 AATGTGCAAGAGCTCTATTTGTC 57.442 39.130 18.59 8.71 42.74 3.18
661 662 5.972107 AAATGTGCAAGAGCTCTATTTGT 57.028 34.783 18.59 0.00 42.74 2.83
715 716 2.034685 AGATGTACGGATCCATGTGTCG 59.965 50.000 13.41 0.00 0.00 4.35
821 822 8.907885 GGCTTAGTTGATCCAATTTCTTATTCT 58.092 33.333 0.00 0.00 0.00 2.40
822 823 8.138074 GGGCTTAGTTGATCCAATTTCTTATTC 58.862 37.037 0.00 0.00 0.00 1.75
824 825 7.357471 AGGGCTTAGTTGATCCAATTTCTTAT 58.643 34.615 0.00 0.00 0.00 1.73
826 827 5.583932 AGGGCTTAGTTGATCCAATTTCTT 58.416 37.500 0.00 0.00 0.00 2.52
827 828 5.044550 AGAGGGCTTAGTTGATCCAATTTCT 60.045 40.000 0.00 0.00 0.00 2.52
828 829 5.196695 AGAGGGCTTAGTTGATCCAATTTC 58.803 41.667 0.00 0.00 0.00 2.17
829 830 5.196695 GAGAGGGCTTAGTTGATCCAATTT 58.803 41.667 0.00 0.00 0.00 1.82
830 831 4.684485 CGAGAGGGCTTAGTTGATCCAATT 60.684 45.833 0.00 0.00 0.00 2.32
831 832 3.181461 CGAGAGGGCTTAGTTGATCCAAT 60.181 47.826 0.00 0.00 0.00 3.16
832 833 2.168521 CGAGAGGGCTTAGTTGATCCAA 59.831 50.000 0.00 0.00 0.00 3.53
833 834 1.757118 CGAGAGGGCTTAGTTGATCCA 59.243 52.381 0.00 0.00 0.00 3.41
834 835 2.032620 TCGAGAGGGCTTAGTTGATCC 58.967 52.381 0.00 0.00 0.00 3.36
897 901 9.887862 ATGAATAGGATCAAACCTTATTCCATT 57.112 29.630 0.00 0.00 41.00 3.16
960 964 5.104109 TCCAATCTCCAAATAGTCCCGATTT 60.104 40.000 0.00 0.00 0.00 2.17
971 975 5.513233 AGTAACTGCATCCAATCTCCAAAT 58.487 37.500 0.00 0.00 0.00 2.32
1059 1064 5.499139 TTGAAGAGAAGCAAATGAAACGT 57.501 34.783 0.00 0.00 0.00 3.99
1134 1140 5.536260 TCAGAGGTTGAATCGATCATCATC 58.464 41.667 0.00 5.59 38.32 2.92
1135 1141 5.541953 TCAGAGGTTGAATCGATCATCAT 57.458 39.130 0.00 0.00 38.03 2.45
1396 1402 6.183361 ACTCCCCCTAGAGTAGCTGTTAATAT 60.183 42.308 0.00 0.00 45.31 1.28
1420 1427 5.098218 TCGTTAGCACCACATAAAAACAC 57.902 39.130 0.00 0.00 0.00 3.32
1476 1483 9.624373 CTACTAGTGAGGTAGGAACATAAACTA 57.376 37.037 5.39 0.00 34.65 2.24
1576 1583 2.511600 CCGCCTAGCCGTTGGAAG 60.512 66.667 0.00 0.00 0.00 3.46
1594 1601 2.381911 ACCGGTACTAATGATGTCCGT 58.618 47.619 4.49 0.00 36.84 4.69
1672 1679 1.762957 CCGGGACTGACAACATCCTAT 59.237 52.381 0.00 0.00 32.70 2.57
1697 1704 2.754946 CGGTACTAAAGGTGCTGGAA 57.245 50.000 0.00 0.00 34.04 3.53
1734 1741 6.238593 GGTGTATGTAGGACGACCTTTAGTAG 60.239 46.154 12.68 0.00 45.36 2.57
1775 1782 3.222603 GAAAGGGGAAGAACAGAGCAAA 58.777 45.455 0.00 0.00 0.00 3.68
1777 1784 1.073923 GGAAAGGGGAAGAACAGAGCA 59.926 52.381 0.00 0.00 0.00 4.26
1935 1944 2.838386 AAGCATTGCACGAGCTAATG 57.162 45.000 11.91 18.29 42.74 1.90
2100 2109 2.257286 ATCGACGACGGTGGTTACGG 62.257 60.000 7.55 0.00 40.21 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.