Multiple sequence alignment - TraesCS7A01G510800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G510800 chr7A 100.000 5288 0 0 1 5288 698681411 698676124 0.000000e+00 9766.0
1 TraesCS7A01G510800 chr7A 85.178 1518 197 27 2030 3530 96569863 96568357 0.000000e+00 1531.0
2 TraesCS7A01G510800 chr7A 86.225 559 71 5 1390 1945 96570408 96569853 7.580000e-168 601.0
3 TraesCS7A01G510800 chr7A 85.417 336 41 7 3659 3990 96568345 96568014 5.070000e-90 342.0
4 TraesCS7A01G510800 chr7A 84.138 145 21 2 4146 4289 96567761 96567618 7.140000e-29 139.0
5 TraesCS7A01G510800 chr7D 93.708 3830 151 49 781 4560 606634889 606638678 0.000000e+00 5655.0
6 TraesCS7A01G510800 chr7D 85.461 1520 189 27 2030 3530 93791027 93789521 0.000000e+00 1554.0
7 TraesCS7A01G510800 chr7D 84.524 336 44 7 3659 3990 93789509 93789178 5.110000e-85 326.0
8 TraesCS7A01G510800 chr7D 85.714 161 18 5 612 771 606634634 606634790 1.180000e-36 165.0
9 TraesCS7A01G510800 chr7D 83.333 144 22 2 4147 4289 93788927 93788785 1.190000e-26 132.0
10 TraesCS7A01G510800 chr7B 94.172 3569 119 44 781 4289 690756194 690752655 0.000000e+00 5356.0
11 TraesCS7A01G510800 chr7B 85.234 1517 198 24 2030 3530 47002999 47001493 0.000000e+00 1537.0
12 TraesCS7A01G510800 chr7B 84.185 626 51 18 4690 5288 690752168 690751564 9.940000e-157 564.0
13 TraesCS7A01G510800 chr7B 84.226 336 45 7 3659 3990 47001481 47001150 2.380000e-83 320.0
14 TraesCS7A01G510800 chr7B 86.508 252 22 4 92 339 690756804 690756561 3.140000e-67 267.0
15 TraesCS7A01G510800 chr7B 83.730 252 13 11 4328 4561 690752573 690752332 4.150000e-51 213.0
16 TraesCS7A01G510800 chr7B 94.000 100 6 0 1 100 690775968 690775869 9.170000e-33 152.0
17 TraesCS7A01G510800 chr7B 84.138 145 21 2 4146 4289 47000875 47000732 7.140000e-29 139.0
18 TraesCS7A01G510800 chr6A 86.034 1518 186 23 2030 3531 591439383 591437876 0.000000e+00 1605.0
19 TraesCS7A01G510800 chr6A 87.276 558 65 6 1391 1945 591439927 591439373 2.690000e-177 632.0
20 TraesCS7A01G510800 chr6A 84.967 306 44 2 3684 3988 591437739 591437435 5.140000e-80 309.0
21 TraesCS7A01G510800 chr6A 85.034 147 16 3 4146 4289 591437193 591437050 1.530000e-30 145.0
22 TraesCS7A01G510800 chr6D 86.406 1486 178 21 2030 3500 443849315 443847839 0.000000e+00 1604.0
23 TraesCS7A01G510800 chr6D 87.276 558 65 6 1391 1945 443849859 443849305 2.690000e-177 632.0
24 TraesCS7A01G510800 chr6D 85.294 306 43 2 3684 3988 443847684 443847380 1.110000e-81 315.0
25 TraesCS7A01G510800 chr6D 86.897 145 17 2 4146 4289 443847139 443846996 1.520000e-35 161.0
26 TraesCS7A01G510800 chr6B 85.620 1516 196 20 2030 3531 668249975 668248468 0.000000e+00 1572.0
27 TraesCS7A01G510800 chr6B 87.433 557 66 4 1391 1945 668250519 668249965 5.780000e-179 638.0
28 TraesCS7A01G510800 chr6B 84.641 306 45 2 3684 3988 668248314 668248010 2.390000e-78 303.0
29 TraesCS7A01G510800 chr6B 86.897 145 17 2 4146 4289 668247761 668247618 1.520000e-35 161.0
30 TraesCS7A01G510800 chr1D 82.965 1221 184 20 2051 3253 349794071 349792857 0.000000e+00 1081.0
31 TraesCS7A01G510800 chr1D 86.856 563 67 5 1388 1945 349794642 349794082 1.620000e-174 623.0
32 TraesCS7A01G510800 chr1D 89.286 112 9 2 342 450 402743488 402743377 2.570000e-28 137.0
33 TraesCS7A01G510800 chr1B 82.881 1215 184 21 2057 3253 471762813 471761605 0.000000e+00 1070.0
34 TraesCS7A01G510800 chr1B 85.968 563 72 6 1388 1945 471763390 471762830 3.530000e-166 595.0
35 TraesCS7A01G510800 chr1A 85.943 562 74 4 1388 1945 450096398 450095838 3.530000e-166 595.0
36 TraesCS7A01G510800 chr4B 82.184 522 73 12 2750 3252 586467247 586466727 1.050000e-116 431.0
37 TraesCS7A01G510800 chr2A 79.661 118 22 2 4882 4997 19229705 19229822 3.390000e-12 84.2
38 TraesCS7A01G510800 chr3B 86.567 67 6 3 342 406 622406828 622406763 2.640000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G510800 chr7A 698676124 698681411 5287 True 9766.000000 9766 100.000000 1 5288 1 chr7A.!!$R1 5287
1 TraesCS7A01G510800 chr7A 96567618 96570408 2790 True 653.250000 1531 85.239500 1390 4289 4 chr7A.!!$R2 2899
2 TraesCS7A01G510800 chr7D 606634634 606638678 4044 False 2910.000000 5655 89.711000 612 4560 2 chr7D.!!$F1 3948
3 TraesCS7A01G510800 chr7D 93788785 93791027 2242 True 670.666667 1554 84.439333 2030 4289 3 chr7D.!!$R1 2259
4 TraesCS7A01G510800 chr7B 690751564 690756804 5240 True 1600.000000 5356 87.148750 92 5288 4 chr7B.!!$R3 5196
5 TraesCS7A01G510800 chr7B 47000732 47002999 2267 True 665.333333 1537 84.532667 2030 4289 3 chr7B.!!$R2 2259
6 TraesCS7A01G510800 chr6A 591437050 591439927 2877 True 672.750000 1605 85.827750 1391 4289 4 chr6A.!!$R1 2898
7 TraesCS7A01G510800 chr6D 443846996 443849859 2863 True 678.000000 1604 86.468250 1391 4289 4 chr6D.!!$R1 2898
8 TraesCS7A01G510800 chr6B 668247618 668250519 2901 True 668.500000 1572 86.147750 1391 4289 4 chr6B.!!$R1 2898
9 TraesCS7A01G510800 chr1D 349792857 349794642 1785 True 852.000000 1081 84.910500 1388 3253 2 chr1D.!!$R2 1865
10 TraesCS7A01G510800 chr1B 471761605 471763390 1785 True 832.500000 1070 84.424500 1388 3253 2 chr1B.!!$R1 1865
11 TraesCS7A01G510800 chr1A 450095838 450096398 560 True 595.000000 595 85.943000 1388 1945 1 chr1A.!!$R1 557
12 TraesCS7A01G510800 chr4B 586466727 586467247 520 True 431.000000 431 82.184000 2750 3252 1 chr4B.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 247 0.036022 TTCACACACATCCATGGCGA 59.964 50.0 6.96 0.0 0.00 5.54 F
318 323 0.038890 TTCAACCGGATGCCCATCAA 59.961 50.0 9.46 0.0 39.54 2.57 F
603 633 0.041238 AGGGATCAGAGTTGTCCGGA 59.959 55.0 0.00 0.0 32.71 5.14 F
1123 1279 0.109458 TGCACGTTCGGTAGCTAGTG 60.109 55.0 0.00 0.0 0.00 2.74 F
2356 2550 0.596600 GCTCACCGTCGACAAGAACA 60.597 55.0 17.16 0.0 0.00 3.18 F
2616 2813 0.039617 CTCCGGAGCAGATCATCGAC 60.040 60.0 20.67 0.0 0.00 4.20 F
3542 3882 3.275143 TCTTCACGGTCTCTCATCTCTC 58.725 50.0 0.00 0.0 0.00 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1327 1489 0.105224 TGAAACCGCGTTCTTCTCCA 59.895 50.000 4.92 0.00 0.00 3.86 R
2016 2198 0.362512 GCTCGAACATTCACGACGAC 59.637 55.000 0.00 0.00 34.82 4.34 R
2421 2615 0.811915 CGTCCTGATTCTCAGTCCGT 59.188 55.000 3.65 0.00 42.80 4.69 R
2520 2714 1.838568 GCTTGTCGACGGGGTTGAAC 61.839 60.000 11.62 0.00 0.00 3.18 R
3636 4001 1.070134 TGGAGCTTACTCTGCAACGTT 59.930 47.619 0.00 0.00 42.98 3.99 R
3647 4012 2.033194 GGGTGCACGTGGAGCTTAC 61.033 63.158 32.96 16.94 34.23 2.34 R
5177 5853 0.178767 CGAGAGTGATGCATCCCCAA 59.821 55.000 23.67 1.98 0.00 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.037858 CTTGATAATGCCAAGGACAAGC 57.962 45.455 0.00 0.00 37.83 4.01
22 23 2.378038 TGATAATGCCAAGGACAAGCC 58.622 47.619 0.00 0.00 0.00 4.35
23 24 1.334869 GATAATGCCAAGGACAAGCCG 59.665 52.381 0.00 0.00 43.43 5.52
24 25 0.326595 TAATGCCAAGGACAAGCCGA 59.673 50.000 0.00 0.00 43.43 5.54
25 26 0.323725 AATGCCAAGGACAAGCCGAT 60.324 50.000 0.00 0.00 43.43 4.18
26 27 0.323725 ATGCCAAGGACAAGCCGATT 60.324 50.000 0.00 0.00 43.43 3.34
27 28 1.243342 TGCCAAGGACAAGCCGATTG 61.243 55.000 0.00 0.00 45.01 2.67
39 40 5.356882 CAAGCCGATTGTCTTACTTTTGA 57.643 39.130 0.00 0.00 33.95 2.69
40 41 5.942872 CAAGCCGATTGTCTTACTTTTGAT 58.057 37.500 0.00 0.00 33.95 2.57
41 42 5.551760 AGCCGATTGTCTTACTTTTGATG 57.448 39.130 0.00 0.00 0.00 3.07
42 43 5.245531 AGCCGATTGTCTTACTTTTGATGA 58.754 37.500 0.00 0.00 0.00 2.92
43 44 5.882557 AGCCGATTGTCTTACTTTTGATGAT 59.117 36.000 0.00 0.00 0.00 2.45
44 45 6.037610 AGCCGATTGTCTTACTTTTGATGATC 59.962 38.462 0.00 0.00 0.00 2.92
45 46 6.183360 GCCGATTGTCTTACTTTTGATGATCA 60.183 38.462 0.00 0.00 0.00 2.92
46 47 7.626240 GCCGATTGTCTTACTTTTGATGATCAA 60.626 37.037 3.29 3.29 34.03 2.57
47 48 8.236586 CCGATTGTCTTACTTTTGATGATCAAA 58.763 33.333 16.04 16.04 43.84 2.69
48 49 9.778993 CGATTGTCTTACTTTTGATGATCAAAT 57.221 29.630 20.04 9.87 44.75 2.32
52 53 9.897744 TGTCTTACTTTTGATGATCAAATGTTC 57.102 29.630 31.11 22.07 46.08 3.18
57 58 8.807667 ACTTTTGATGATCAAATGTTCTTGAC 57.192 30.769 24.91 0.00 46.08 3.18
58 59 7.592533 ACTTTTGATGATCAAATGTTCTTGACG 59.407 33.333 24.91 3.93 46.08 4.35
59 60 6.799926 TTGATGATCAAATGTTCTTGACGA 57.200 33.333 5.21 0.00 38.12 4.20
60 61 6.169419 TGATGATCAAATGTTCTTGACGAC 57.831 37.500 0.00 0.00 38.12 4.34
61 62 5.700373 TGATGATCAAATGTTCTTGACGACA 59.300 36.000 0.00 0.00 38.12 4.35
62 63 5.596268 TGATCAAATGTTCTTGACGACAG 57.404 39.130 0.00 0.00 38.12 3.51
63 64 3.878086 TCAAATGTTCTTGACGACAGC 57.122 42.857 0.00 0.00 30.31 4.40
64 65 2.220824 TCAAATGTTCTTGACGACAGCG 59.779 45.455 0.00 0.00 44.79 5.18
65 66 1.148310 AATGTTCTTGACGACAGCGG 58.852 50.000 0.00 0.00 43.17 5.52
66 67 0.670546 ATGTTCTTGACGACAGCGGG 60.671 55.000 0.00 0.00 43.17 6.13
67 68 1.006571 GTTCTTGACGACAGCGGGA 60.007 57.895 0.00 0.00 43.17 5.14
68 69 0.389948 GTTCTTGACGACAGCGGGAT 60.390 55.000 0.00 0.00 43.17 3.85
69 70 1.135199 GTTCTTGACGACAGCGGGATA 60.135 52.381 0.00 0.00 43.17 2.59
70 71 1.179152 TCTTGACGACAGCGGGATAA 58.821 50.000 0.00 0.00 43.17 1.75
71 72 1.135199 TCTTGACGACAGCGGGATAAC 60.135 52.381 0.00 0.00 43.17 1.89
72 73 0.457166 TTGACGACAGCGGGATAACG 60.457 55.000 0.00 0.00 43.17 3.18
73 74 1.307355 TGACGACAGCGGGATAACGA 61.307 55.000 0.00 0.00 43.17 3.85
74 75 0.591741 GACGACAGCGGGATAACGAG 60.592 60.000 0.00 0.00 43.17 4.18
75 76 1.944676 CGACAGCGGGATAACGAGC 60.945 63.158 0.00 0.00 35.47 5.03
76 77 1.437986 GACAGCGGGATAACGAGCT 59.562 57.895 0.00 0.00 41.07 4.09
77 78 0.666913 GACAGCGGGATAACGAGCTA 59.333 55.000 0.00 0.00 37.94 3.32
78 79 1.066605 GACAGCGGGATAACGAGCTAA 59.933 52.381 0.00 0.00 37.94 3.09
79 80 1.687123 ACAGCGGGATAACGAGCTAAT 59.313 47.619 0.00 0.00 37.94 1.73
80 81 2.061773 CAGCGGGATAACGAGCTAATG 58.938 52.381 0.00 0.00 37.94 1.90
81 82 1.687123 AGCGGGATAACGAGCTAATGT 59.313 47.619 0.00 0.00 38.29 2.71
82 83 2.889045 AGCGGGATAACGAGCTAATGTA 59.111 45.455 0.00 0.00 38.29 2.29
83 84 2.985139 GCGGGATAACGAGCTAATGTAC 59.015 50.000 0.00 0.00 35.47 2.90
84 85 3.305199 GCGGGATAACGAGCTAATGTACT 60.305 47.826 0.00 0.00 35.47 2.73
85 86 4.227538 CGGGATAACGAGCTAATGTACTG 58.772 47.826 0.00 0.00 35.47 2.74
86 87 4.261489 CGGGATAACGAGCTAATGTACTGT 60.261 45.833 0.00 0.00 35.47 3.55
87 88 4.982916 GGGATAACGAGCTAATGTACTGTG 59.017 45.833 0.00 0.00 0.00 3.66
88 89 5.221185 GGGATAACGAGCTAATGTACTGTGA 60.221 44.000 0.00 0.00 0.00 3.58
89 90 6.270815 GGATAACGAGCTAATGTACTGTGAA 58.729 40.000 0.00 0.00 0.00 3.18
90 91 6.418226 GGATAACGAGCTAATGTACTGTGAAG 59.582 42.308 0.00 0.00 0.00 3.02
101 102 1.208358 CTGTGAAGCCGTGCATGTG 59.792 57.895 4.96 0.00 0.00 3.21
112 113 1.331420 CGTGCATGTGATCGATGAACG 60.331 52.381 18.61 18.61 44.33 3.95
114 115 0.933097 GCATGTGATCGATGAACGCT 59.067 50.000 0.54 0.00 42.26 5.07
119 120 4.040445 TGTGATCGATGAACGCTCAATA 57.960 40.909 0.54 0.00 46.05 1.90
133 134 6.233430 ACGCTCAATATTTCACTATCATGC 57.767 37.500 0.00 0.00 0.00 4.06
135 136 5.107337 CGCTCAATATTTCACTATCATGCGT 60.107 40.000 0.00 0.00 33.82 5.24
152 153 3.337358 TGCGTCAATCATGTCATGTCTT 58.663 40.909 12.54 5.35 0.00 3.01
153 154 3.125658 TGCGTCAATCATGTCATGTCTTG 59.874 43.478 12.54 15.60 0.00 3.02
156 157 3.379372 GTCAATCATGTCATGTCTTGGGG 59.621 47.826 20.66 6.24 0.00 4.96
157 158 3.010472 TCAATCATGTCATGTCTTGGGGT 59.990 43.478 20.66 0.00 0.00 4.95
158 159 2.495155 TCATGTCATGTCTTGGGGTG 57.505 50.000 12.54 0.00 0.00 4.61
159 160 0.813184 CATGTCATGTCTTGGGGTGC 59.187 55.000 4.53 0.00 0.00 5.01
160 161 0.405198 ATGTCATGTCTTGGGGTGCA 59.595 50.000 0.00 0.00 0.00 4.57
161 162 0.537143 TGTCATGTCTTGGGGTGCAC 60.537 55.000 8.80 8.80 0.00 4.57
163 164 2.034066 ATGTCTTGGGGTGCACCG 59.966 61.111 29.08 15.67 41.60 4.94
209 210 2.066999 GCTCCCCACTCCCCTACTG 61.067 68.421 0.00 0.00 0.00 2.74
213 214 1.281925 CCCCACTCCCCTACTGCATT 61.282 60.000 0.00 0.00 0.00 3.56
223 224 1.765314 CCTACTGCATTCCTAGCACCT 59.235 52.381 0.00 0.00 37.02 4.00
242 247 0.036022 TTCACACACATCCATGGCGA 59.964 50.000 6.96 0.00 0.00 5.54
256 261 1.450312 GGCGACATAAGCAGCTGGT 60.450 57.895 13.85 13.85 36.08 4.00
267 272 2.936928 CAGCTGGTCTGCATGAACA 58.063 52.632 5.57 4.24 40.62 3.18
305 310 4.337060 GGCGCCAACCGTTCAACC 62.337 66.667 24.80 0.00 39.71 3.77
306 311 4.676586 GCGCCAACCGTTCAACCG 62.677 66.667 0.00 0.00 39.71 4.44
318 323 0.038890 TTCAACCGGATGCCCATCAA 59.961 50.000 9.46 0.00 39.54 2.57
339 344 8.502387 CATCAAAGACAGTAGAAGAAAAAGGAG 58.498 37.037 0.00 0.00 0.00 3.69
340 345 6.992715 TCAAAGACAGTAGAAGAAAAAGGAGG 59.007 38.462 0.00 0.00 0.00 4.30
341 346 6.749036 AAGACAGTAGAAGAAAAAGGAGGA 57.251 37.500 0.00 0.00 0.00 3.71
342 347 6.749036 AGACAGTAGAAGAAAAAGGAGGAA 57.251 37.500 0.00 0.00 0.00 3.36
343 348 7.138054 AGACAGTAGAAGAAAAAGGAGGAAA 57.862 36.000 0.00 0.00 0.00 3.13
344 349 7.574607 AGACAGTAGAAGAAAAAGGAGGAAAA 58.425 34.615 0.00 0.00 0.00 2.29
345 350 8.053355 AGACAGTAGAAGAAAAAGGAGGAAAAA 58.947 33.333 0.00 0.00 0.00 1.94
364 369 4.725790 AAAAAGATTCATGGGCACTAGC 57.274 40.909 0.00 0.00 41.10 3.42
365 370 3.370840 AAAGATTCATGGGCACTAGCA 57.629 42.857 0.00 0.00 44.61 3.49
367 372 1.133976 AGATTCATGGGCACTAGCACC 60.134 52.381 0.00 0.00 46.13 5.01
368 373 0.106519 ATTCATGGGCACTAGCACCC 60.107 55.000 12.83 12.83 46.13 4.61
372 377 3.009115 GGGCACTAGCACCCAGGA 61.009 66.667 14.48 0.00 46.22 3.86
373 378 2.269241 GGCACTAGCACCCAGGAC 59.731 66.667 0.00 0.00 44.61 3.85
374 379 2.592993 GGCACTAGCACCCAGGACA 61.593 63.158 0.00 0.00 44.61 4.02
375 380 1.604378 GCACTAGCACCCAGGACAT 59.396 57.895 0.00 0.00 41.58 3.06
376 381 0.830648 GCACTAGCACCCAGGACATA 59.169 55.000 0.00 0.00 41.58 2.29
377 382 1.202580 GCACTAGCACCCAGGACATAG 60.203 57.143 0.00 0.00 41.58 2.23
378 383 2.111384 CACTAGCACCCAGGACATAGT 58.889 52.381 0.00 0.00 0.00 2.12
379 384 2.501723 CACTAGCACCCAGGACATAGTT 59.498 50.000 0.00 0.00 0.00 2.24
380 385 3.055094 CACTAGCACCCAGGACATAGTTT 60.055 47.826 0.00 0.00 0.00 2.66
381 386 3.587506 ACTAGCACCCAGGACATAGTTTT 59.412 43.478 0.00 0.00 0.00 2.43
382 387 4.781087 ACTAGCACCCAGGACATAGTTTTA 59.219 41.667 0.00 0.00 0.00 1.52
383 388 4.862641 AGCACCCAGGACATAGTTTTAT 57.137 40.909 0.00 0.00 0.00 1.40
384 389 5.968676 AGCACCCAGGACATAGTTTTATA 57.031 39.130 0.00 0.00 0.00 0.98
385 390 6.321821 AGCACCCAGGACATAGTTTTATAA 57.678 37.500 0.00 0.00 0.00 0.98
386 391 6.727394 AGCACCCAGGACATAGTTTTATAAA 58.273 36.000 0.00 0.00 0.00 1.40
387 392 7.179269 AGCACCCAGGACATAGTTTTATAAAA 58.821 34.615 6.54 6.54 0.00 1.52
388 393 7.672239 AGCACCCAGGACATAGTTTTATAAAAA 59.328 33.333 12.14 0.00 0.00 1.94
409 414 4.530857 CGATCCGGGGTGAGGCAC 62.531 72.222 0.00 0.00 0.00 5.01
422 427 3.642705 GTGAGGCACCAGAAAATTCAAC 58.357 45.455 0.00 0.00 0.00 3.18
423 428 2.627699 TGAGGCACCAGAAAATTCAACC 59.372 45.455 0.00 0.00 0.00 3.77
424 429 1.970640 AGGCACCAGAAAATTCAACCC 59.029 47.619 0.00 0.00 0.00 4.11
425 430 1.001974 GGCACCAGAAAATTCAACCCC 59.998 52.381 0.00 0.00 0.00 4.95
426 431 1.336795 GCACCAGAAAATTCAACCCCG 60.337 52.381 0.00 0.00 0.00 5.73
427 432 2.235016 CACCAGAAAATTCAACCCCGA 58.765 47.619 0.00 0.00 0.00 5.14
428 433 2.030274 CACCAGAAAATTCAACCCCGAC 60.030 50.000 0.00 0.00 0.00 4.79
429 434 1.199097 CCAGAAAATTCAACCCCGACG 59.801 52.381 0.00 0.00 0.00 5.12
430 435 1.199097 CAGAAAATTCAACCCCGACGG 59.801 52.381 6.99 6.99 37.81 4.79
441 446 2.202837 CCGACGGGGTTCGAATCC 60.203 66.667 19.73 19.73 41.78 3.01
442 447 2.718073 CCGACGGGGTTCGAATCCT 61.718 63.158 26.15 8.25 41.78 3.24
443 448 1.518572 CGACGGGGTTCGAATCCTG 60.519 63.158 30.80 30.80 41.78 3.86
444 449 1.153429 GACGGGGTTCGAATCCTGG 60.153 63.158 34.14 24.20 40.02 4.45
445 450 2.513897 CGGGGTTCGAATCCTGGC 60.514 66.667 26.18 10.00 42.43 4.85
446 451 2.124278 GGGGTTCGAATCCTGGCC 60.124 66.667 26.15 9.46 0.00 5.36
447 452 2.513897 GGGTTCGAATCCTGGCCG 60.514 66.667 20.59 0.00 0.00 6.13
448 453 3.202706 GGTTCGAATCCTGGCCGC 61.203 66.667 0.00 0.00 0.00 6.53
449 454 2.435938 GTTCGAATCCTGGCCGCA 60.436 61.111 0.00 0.00 0.00 5.69
450 455 2.038269 GTTCGAATCCTGGCCGCAA 61.038 57.895 0.00 0.00 0.00 4.85
451 456 1.745115 TTCGAATCCTGGCCGCAAG 60.745 57.895 0.00 0.00 0.00 4.01
463 468 2.270205 CGCAAGGTGAGCCATCCT 59.730 61.111 0.00 0.00 37.19 3.24
464 469 1.377725 CGCAAGGTGAGCCATCCTT 60.378 57.895 0.00 0.00 43.79 3.36
466 471 4.751431 AAGGTGAGCCATCCTTGC 57.249 55.556 3.60 0.00 41.75 4.01
467 472 1.000396 AAGGTGAGCCATCCTTGCC 60.000 57.895 3.60 0.00 41.75 4.52
468 473 1.792757 AAGGTGAGCCATCCTTGCCA 61.793 55.000 3.60 0.00 41.75 4.92
469 474 2.048603 GGTGAGCCATCCTTGCCAC 61.049 63.158 0.00 0.00 34.09 5.01
470 475 1.001641 GTGAGCCATCCTTGCCACT 60.002 57.895 0.00 0.00 31.46 4.00
471 476 0.253044 GTGAGCCATCCTTGCCACTA 59.747 55.000 0.00 0.00 31.46 2.74
472 477 0.543277 TGAGCCATCCTTGCCACTAG 59.457 55.000 0.00 0.00 0.00 2.57
473 478 0.833287 GAGCCATCCTTGCCACTAGA 59.167 55.000 0.00 0.00 0.00 2.43
474 479 0.543749 AGCCATCCTTGCCACTAGAC 59.456 55.000 0.00 0.00 0.00 2.59
475 480 0.543749 GCCATCCTTGCCACTAGACT 59.456 55.000 0.00 0.00 0.00 3.24
476 481 1.762957 GCCATCCTTGCCACTAGACTA 59.237 52.381 0.00 0.00 0.00 2.59
477 482 2.483889 GCCATCCTTGCCACTAGACTAC 60.484 54.545 0.00 0.00 0.00 2.73
478 483 2.766263 CCATCCTTGCCACTAGACTACA 59.234 50.000 0.00 0.00 0.00 2.74
479 484 3.181471 CCATCCTTGCCACTAGACTACAG 60.181 52.174 0.00 0.00 0.00 2.74
480 485 1.825474 TCCTTGCCACTAGACTACAGC 59.175 52.381 0.00 0.00 0.00 4.40
481 486 1.134670 CCTTGCCACTAGACTACAGCC 60.135 57.143 0.00 0.00 0.00 4.85
482 487 1.827969 CTTGCCACTAGACTACAGCCT 59.172 52.381 0.00 0.00 0.00 4.58
483 488 2.820728 TGCCACTAGACTACAGCCTA 57.179 50.000 0.00 0.00 0.00 3.93
484 489 2.656002 TGCCACTAGACTACAGCCTAG 58.344 52.381 0.00 0.00 38.57 3.02
485 490 2.025226 TGCCACTAGACTACAGCCTAGT 60.025 50.000 0.00 0.00 44.47 2.57
486 491 2.619646 GCCACTAGACTACAGCCTAGTC 59.380 54.545 10.08 10.08 42.47 2.59
487 492 3.215975 CCACTAGACTACAGCCTAGTCC 58.784 54.545 13.25 0.34 42.47 3.85
488 493 3.117813 CCACTAGACTACAGCCTAGTCCT 60.118 52.174 13.25 6.16 42.47 3.85
489 494 4.131596 CACTAGACTACAGCCTAGTCCTC 58.868 52.174 13.25 0.00 42.47 3.71
490 495 3.781407 ACTAGACTACAGCCTAGTCCTCA 59.219 47.826 13.25 2.31 41.00 3.86
491 496 3.741245 AGACTACAGCCTAGTCCTCAA 57.259 47.619 13.25 0.00 43.61 3.02
492 497 4.048970 AGACTACAGCCTAGTCCTCAAA 57.951 45.455 13.25 0.00 43.61 2.69
493 498 4.417437 AGACTACAGCCTAGTCCTCAAAA 58.583 43.478 13.25 0.00 43.61 2.44
494 499 4.464597 AGACTACAGCCTAGTCCTCAAAAG 59.535 45.833 13.25 0.00 43.61 2.27
495 500 3.515901 ACTACAGCCTAGTCCTCAAAAGG 59.484 47.826 0.00 0.00 44.89 3.11
516 521 2.368221 GAGGAACCAGGAGATGAGATGG 59.632 54.545 0.00 0.00 38.83 3.51
536 566 7.975608 AGATGGAGAGATGATTATTGACACAT 58.024 34.615 0.00 0.00 0.00 3.21
546 576 7.500720 TGATTATTGACACATGGATCATGAC 57.499 36.000 13.96 6.32 43.81 3.06
547 577 7.284820 TGATTATTGACACATGGATCATGACT 58.715 34.615 13.96 0.00 43.81 3.41
563 593 6.049955 TCATGACTAGTCTAAAACCCCTTG 57.950 41.667 23.01 3.67 0.00 3.61
566 596 5.152934 TGACTAGTCTAAAACCCCTTGTCT 58.847 41.667 23.01 0.00 33.02 3.41
568 598 6.783977 TGACTAGTCTAAAACCCCTTGTCTAA 59.216 38.462 23.01 0.00 33.02 2.10
569 599 7.290714 TGACTAGTCTAAAACCCCTTGTCTAAA 59.709 37.037 23.01 0.00 33.02 1.85
570 600 7.448420 ACTAGTCTAAAACCCCTTGTCTAAAC 58.552 38.462 0.00 0.00 0.00 2.01
571 601 5.628130 AGTCTAAAACCCCTTGTCTAAACC 58.372 41.667 0.00 0.00 0.00 3.27
572 602 5.371769 AGTCTAAAACCCCTTGTCTAAACCT 59.628 40.000 0.00 0.00 0.00 3.50
573 603 5.704515 GTCTAAAACCCCTTGTCTAAACCTC 59.295 44.000 0.00 0.00 0.00 3.85
574 604 4.808767 AAAACCCCTTGTCTAAACCTCT 57.191 40.909 0.00 0.00 0.00 3.69
575 605 4.808767 AAACCCCTTGTCTAAACCTCTT 57.191 40.909 0.00 0.00 0.00 2.85
576 606 3.790089 ACCCCTTGTCTAAACCTCTTG 57.210 47.619 0.00 0.00 0.00 3.02
577 607 3.053826 ACCCCTTGTCTAAACCTCTTGT 58.946 45.455 0.00 0.00 0.00 3.16
579 609 3.326747 CCCTTGTCTAAACCTCTTGTCG 58.673 50.000 0.00 0.00 0.00 4.35
580 610 2.737252 CCTTGTCTAAACCTCTTGTCGC 59.263 50.000 0.00 0.00 0.00 5.19
581 611 3.390135 CTTGTCTAAACCTCTTGTCGCA 58.610 45.455 0.00 0.00 0.00 5.10
582 612 2.750948 TGTCTAAACCTCTTGTCGCAC 58.249 47.619 0.00 0.00 0.00 5.34
583 613 1.719780 GTCTAAACCTCTTGTCGCACG 59.280 52.381 0.00 0.00 0.00 5.34
584 614 1.610038 TCTAAACCTCTTGTCGCACGA 59.390 47.619 0.00 0.00 0.00 4.35
585 615 1.986378 CTAAACCTCTTGTCGCACGAG 59.014 52.381 0.00 6.43 30.91 4.18
587 617 2.125912 CCTCTTGTCGCACGAGGG 60.126 66.667 18.39 8.95 43.42 4.30
588 618 2.636412 CCTCTTGTCGCACGAGGGA 61.636 63.158 18.39 0.00 43.42 4.20
589 619 1.513158 CTCTTGTCGCACGAGGGAT 59.487 57.895 2.49 0.00 39.07 3.85
590 620 0.526524 CTCTTGTCGCACGAGGGATC 60.527 60.000 2.49 0.00 39.07 3.36
591 621 1.215382 CTTGTCGCACGAGGGATCA 59.785 57.895 2.49 1.12 39.07 2.92
592 622 0.803768 CTTGTCGCACGAGGGATCAG 60.804 60.000 2.49 0.00 39.07 2.90
593 623 1.248101 TTGTCGCACGAGGGATCAGA 61.248 55.000 2.49 0.00 39.07 3.27
594 624 1.064946 GTCGCACGAGGGATCAGAG 59.935 63.158 2.49 0.00 39.07 3.35
595 625 1.378646 TCGCACGAGGGATCAGAGT 60.379 57.895 0.00 0.00 0.00 3.24
596 626 0.965866 TCGCACGAGGGATCAGAGTT 60.966 55.000 0.00 0.00 0.00 3.01
597 627 0.803768 CGCACGAGGGATCAGAGTTG 60.804 60.000 0.00 0.00 0.00 3.16
598 628 0.247736 GCACGAGGGATCAGAGTTGT 59.752 55.000 0.00 0.00 0.00 3.32
599 629 1.737363 GCACGAGGGATCAGAGTTGTC 60.737 57.143 0.00 0.00 0.00 3.18
600 630 1.134965 CACGAGGGATCAGAGTTGTCC 60.135 57.143 0.00 0.00 0.00 4.02
601 631 0.101399 CGAGGGATCAGAGTTGTCCG 59.899 60.000 0.00 0.00 32.71 4.79
602 632 0.461961 GAGGGATCAGAGTTGTCCGG 59.538 60.000 0.00 0.00 32.71 5.14
603 633 0.041238 AGGGATCAGAGTTGTCCGGA 59.959 55.000 0.00 0.00 32.71 5.14
604 634 1.123928 GGGATCAGAGTTGTCCGGAT 58.876 55.000 7.81 0.00 32.71 4.18
605 635 2.091278 AGGGATCAGAGTTGTCCGGATA 60.091 50.000 7.81 0.10 32.71 2.59
606 636 2.297597 GGGATCAGAGTTGTCCGGATAG 59.702 54.545 7.81 0.00 32.71 2.08
607 637 2.288518 GGATCAGAGTTGTCCGGATAGC 60.289 54.545 7.81 7.32 0.00 2.97
608 638 1.847328 TCAGAGTTGTCCGGATAGCA 58.153 50.000 16.99 3.35 0.00 3.49
609 639 1.751351 TCAGAGTTGTCCGGATAGCAG 59.249 52.381 16.99 6.80 0.00 4.24
610 640 1.478510 CAGAGTTGTCCGGATAGCAGT 59.521 52.381 16.99 0.00 0.00 4.40
633 663 4.102210 TGCAAAAATTGAGGGATGAAACCA 59.898 37.500 0.00 0.00 0.00 3.67
644 674 5.701224 AGGGATGAAACCAACACTTCTTTA 58.299 37.500 0.00 0.00 0.00 1.85
668 700 3.471495 AAAAATCCGCACTTGTCGATC 57.529 42.857 0.00 0.00 0.00 3.69
786 835 9.052759 AGTTTAATTATAAATGTGGCCGACTAG 57.947 33.333 0.00 0.00 33.76 2.57
787 836 7.972832 TTAATTATAAATGTGGCCGACTAGG 57.027 36.000 0.00 0.00 44.97 3.02
834 986 6.956497 TCAGAAATGGAAATATTTTTGGGGG 58.044 36.000 1.43 0.00 34.61 5.40
887 1040 3.263170 AGGGTTTTATTTGTTGCCATCCC 59.737 43.478 0.00 0.00 0.00 3.85
1055 1208 1.265635 CATCGATCTCGTGAGTCCTCC 59.734 57.143 0.00 0.00 40.80 4.30
1056 1209 0.810426 TCGATCTCGTGAGTCCTCCG 60.810 60.000 0.00 0.00 40.80 4.63
1058 1211 2.065906 GATCTCGTGAGTCCTCCGCC 62.066 65.000 0.00 0.00 0.00 6.13
1059 1212 4.180946 CTCGTGAGTCCTCCGCCG 62.181 72.222 0.00 0.00 0.00 6.46
1085 1238 1.644372 CCTGATCCTCGTCTCGTCG 59.356 63.158 0.00 0.00 0.00 5.12
1099 1252 3.896133 GTCGCCCTGCCATGCATG 61.896 66.667 20.19 20.19 38.13 4.06
1117 1273 2.695055 CGCATGCACGTTCGGTAG 59.305 61.111 19.57 0.00 0.00 3.18
1121 1277 1.200483 CATGCACGTTCGGTAGCTAG 58.800 55.000 0.00 0.00 0.00 3.42
1122 1278 0.815734 ATGCACGTTCGGTAGCTAGT 59.184 50.000 0.00 0.00 0.00 2.57
1123 1279 0.109458 TGCACGTTCGGTAGCTAGTG 60.109 55.000 0.00 0.00 0.00 2.74
1130 1286 2.202892 GGTAGCTAGTGGTGGCGC 60.203 66.667 0.00 0.00 34.73 6.53
1164 1323 7.653713 GTCCTGAAATGTATGTAACTCGATGAT 59.346 37.037 0.00 0.00 0.00 2.45
1165 1324 7.653311 TCCTGAAATGTATGTAACTCGATGATG 59.347 37.037 0.00 0.00 0.00 3.07
1166 1325 7.095481 CCTGAAATGTATGTAACTCGATGATGG 60.095 40.741 0.00 0.00 0.00 3.51
1320 1482 7.240167 AGAAGGTATGATCTCATCTCATCTCA 58.760 38.462 0.00 0.00 37.76 3.27
1321 1483 7.897030 AGAAGGTATGATCTCATCTCATCTCAT 59.103 37.037 0.00 0.00 37.76 2.90
1322 1484 7.649533 AGGTATGATCTCATCTCATCTCATC 57.350 40.000 0.00 0.00 37.76 2.92
1323 1485 7.415908 AGGTATGATCTCATCTCATCTCATCT 58.584 38.462 0.00 0.00 37.76 2.90
1324 1486 7.558807 AGGTATGATCTCATCTCATCTCATCTC 59.441 40.741 0.00 0.00 37.76 2.75
1327 1489 4.097551 TCTCATCTCATCTCATCTCGGT 57.902 45.455 0.00 0.00 0.00 4.69
1328 1490 3.819902 TCTCATCTCATCTCATCTCGGTG 59.180 47.826 0.00 0.00 0.00 4.94
1354 1524 4.823790 AGAACGCGGTTTCAGTTAATTT 57.176 36.364 12.47 0.00 0.00 1.82
1371 1541 8.392612 CAGTTAATTTGATCCATTTTTCATGGC 58.607 33.333 0.00 0.00 39.01 4.40
1383 1560 3.740397 CATGGCGCTGTGTGTGGG 61.740 66.667 7.64 0.00 0.00 4.61
1412 1589 3.885901 GGAGAGCAAGTTCCTCAAGTTTT 59.114 43.478 0.00 0.00 0.00 2.43
1998 2180 7.340232 TCTCATTCTTGGCTGTGCTAATTAATT 59.660 33.333 5.89 5.89 0.00 1.40
1999 2181 8.518430 TCATTCTTGGCTGTGCTAATTAATTA 57.482 30.769 7.66 7.66 0.00 1.40
2000 2182 8.965819 TCATTCTTGGCTGTGCTAATTAATTAA 58.034 29.630 9.15 0.00 0.00 1.40
2002 2184 9.754382 ATTCTTGGCTGTGCTAATTAATTAATG 57.246 29.630 11.42 1.74 0.00 1.90
2005 2187 5.598005 TGGCTGTGCTAATTAATTAATGCCT 59.402 36.000 23.34 9.43 36.73 4.75
2006 2188 6.775142 TGGCTGTGCTAATTAATTAATGCCTA 59.225 34.615 23.34 13.46 36.73 3.93
2007 2189 7.286546 TGGCTGTGCTAATTAATTAATGCCTAA 59.713 33.333 23.34 10.19 36.73 2.69
2008 2190 8.306761 GGCTGTGCTAATTAATTAATGCCTAAT 58.693 33.333 19.01 5.14 33.45 1.73
2009 2191 9.132521 GCTGTGCTAATTAATTAATGCCTAATG 57.867 33.333 11.42 2.92 30.24 1.90
2010 2192 9.630098 CTGTGCTAATTAATTAATGCCTAATGG 57.370 33.333 11.42 0.00 30.24 3.16
2011 2193 8.584157 TGTGCTAATTAATTAATGCCTAATGGG 58.416 33.333 11.42 0.00 38.36 4.00
2021 2215 2.960129 CTAATGGGCCGCGTCGTC 60.960 66.667 4.92 0.00 0.00 4.20
2043 2237 2.808543 GTGAATGTTCGAGCAGGTTCTT 59.191 45.455 8.26 0.00 0.00 2.52
2356 2550 0.596600 GCTCACCGTCGACAAGAACA 60.597 55.000 17.16 0.00 0.00 3.18
2433 2627 1.215647 GGCGTCACGGACTGAGAAT 59.784 57.895 0.00 0.00 0.00 2.40
2616 2813 0.039617 CTCCGGAGCAGATCATCGAC 60.040 60.000 20.67 0.00 0.00 4.20
3542 3882 3.275143 TCTTCACGGTCTCTCATCTCTC 58.725 50.000 0.00 0.00 0.00 3.20
3558 3898 8.430431 TCTCATCTCTCCGTTTTCTATCTAGTA 58.570 37.037 0.00 0.00 0.00 1.82
3567 3920 9.736414 TCCGTTTTCTATCTAGTAGCTACATAT 57.264 33.333 25.28 16.41 0.00 1.78
3581 3938 4.081697 AGCTACATATACATGCATACGCCA 60.082 41.667 0.00 0.00 37.32 5.69
3621 3986 4.379813 CCCTGACATGCATTGTACTGTTTC 60.380 45.833 0.00 0.00 39.18 2.78
3623 3988 5.391310 CCTGACATGCATTGTACTGTTTCTC 60.391 44.000 0.00 0.00 39.18 2.87
3624 3989 4.152223 TGACATGCATTGTACTGTTTCTCG 59.848 41.667 0.00 0.00 39.18 4.04
3625 3990 4.065088 ACATGCATTGTACTGTTTCTCGT 58.935 39.130 0.00 0.00 36.57 4.18
3626 3991 4.515191 ACATGCATTGTACTGTTTCTCGTT 59.485 37.500 0.00 0.00 36.57 3.85
3629 3994 3.664025 GCATTGTACTGTTTCTCGTTTGC 59.336 43.478 0.00 0.00 0.00 3.68
3630 3995 4.554723 GCATTGTACTGTTTCTCGTTTGCT 60.555 41.667 0.00 0.00 0.00 3.91
3631 3996 5.333798 GCATTGTACTGTTTCTCGTTTGCTA 60.334 40.000 0.00 0.00 0.00 3.49
3632 3997 6.620733 GCATTGTACTGTTTCTCGTTTGCTAT 60.621 38.462 0.00 0.00 0.00 2.97
3633 3998 5.839262 TGTACTGTTTCTCGTTTGCTATG 57.161 39.130 0.00 0.00 0.00 2.23
3634 3999 5.294356 TGTACTGTTTCTCGTTTGCTATGT 58.706 37.500 0.00 0.00 0.00 2.29
3635 4000 6.448852 TGTACTGTTTCTCGTTTGCTATGTA 58.551 36.000 0.00 0.00 0.00 2.29
3636 4001 6.924612 TGTACTGTTTCTCGTTTGCTATGTAA 59.075 34.615 0.00 0.00 0.00 2.41
3647 4012 4.661993 TTGCTATGTAAACGTTGCAGAG 57.338 40.909 17.87 17.87 42.57 3.35
4307 4833 2.360852 ATCCGTCCGTCGACACCT 60.361 61.111 17.16 0.00 42.86 4.00
4308 4834 2.320339 GATCCGTCCGTCGACACCTC 62.320 65.000 17.16 1.85 42.86 3.85
4309 4835 3.359523 CCGTCCGTCGACACCTCA 61.360 66.667 17.16 0.00 42.86 3.86
4311 4837 1.008194 CGTCCGTCGACACCTCAAA 60.008 57.895 17.16 0.00 42.86 2.69
4312 4838 0.595567 CGTCCGTCGACACCTCAAAA 60.596 55.000 17.16 0.00 42.86 2.44
4313 4839 1.137513 GTCCGTCGACACCTCAAAAG 58.862 55.000 17.16 0.00 38.99 2.27
4314 4840 1.034356 TCCGTCGACACCTCAAAAGA 58.966 50.000 17.16 0.00 0.00 2.52
4315 4841 1.616865 TCCGTCGACACCTCAAAAGAT 59.383 47.619 17.16 0.00 0.00 2.40
4317 4843 1.649171 CGTCGACACCTCAAAAGATCG 59.351 52.381 17.16 0.00 0.00 3.69
4361 4915 6.532988 AAACTAGTCAGGAACTCAGGATAC 57.467 41.667 0.00 0.00 39.55 2.24
4399 4953 7.870509 TTCAGCTGCAGATTAAATTAGTGAT 57.129 32.000 20.43 0.00 0.00 3.06
4465 5023 8.842764 ACTAGTCCCCCTTTTTGAAGATAATTA 58.157 33.333 0.00 0.00 0.00 1.40
4466 5024 9.868160 CTAGTCCCCCTTTTTGAAGATAATTAT 57.132 33.333 0.00 0.00 0.00 1.28
4561 5127 9.534565 TTTGTAGATCAAATAGACTGTGCTATC 57.465 33.333 0.00 0.00 40.56 2.08
4562 5128 7.363431 TGTAGATCAAATAGACTGTGCTATCG 58.637 38.462 0.00 0.00 30.95 2.92
4564 5130 6.810911 AGATCAAATAGACTGTGCTATCGTT 58.189 36.000 0.00 0.00 30.95 3.85
4565 5131 7.268586 AGATCAAATAGACTGTGCTATCGTTT 58.731 34.615 0.00 0.00 30.95 3.60
4566 5132 6.647212 TCAAATAGACTGTGCTATCGTTTG 57.353 37.500 0.00 0.00 30.95 2.93
4567 5133 5.580691 TCAAATAGACTGTGCTATCGTTTGG 59.419 40.000 0.00 0.00 31.72 3.28
4570 5136 3.326747 AGACTGTGCTATCGTTTGGAAC 58.673 45.455 0.00 0.00 0.00 3.62
4592 5238 6.301169 ACCTTGACTAAATTCTAGACCAGG 57.699 41.667 0.00 11.54 0.00 4.45
4609 5257 0.532115 AGGCGGCATTTCACCATTTC 59.468 50.000 13.08 0.00 0.00 2.17
4613 5261 3.367910 GGCGGCATTTCACCATTTCTTTA 60.368 43.478 3.07 0.00 0.00 1.85
4642 5290 4.552355 TCGATTACAACGAAGACACACAT 58.448 39.130 0.00 0.00 36.84 3.21
4643 5291 4.384547 TCGATTACAACGAAGACACACATG 59.615 41.667 0.00 0.00 36.84 3.21
4644 5292 3.870723 TTACAACGAAGACACACATGC 57.129 42.857 0.00 0.00 0.00 4.06
4645 5293 0.944386 ACAACGAAGACACACATGCC 59.056 50.000 0.00 0.00 0.00 4.40
4646 5294 0.238289 CAACGAAGACACACATGCCC 59.762 55.000 0.00 0.00 0.00 5.36
4647 5295 0.179032 AACGAAGACACACATGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
4648 5296 0.884704 ACGAAGACACACATGCCCAC 60.885 55.000 0.00 0.00 0.00 4.61
4649 5297 0.884259 CGAAGACACACATGCCCACA 60.884 55.000 0.00 0.00 0.00 4.17
4650 5298 0.593128 GAAGACACACATGCCCACAC 59.407 55.000 0.00 0.00 0.00 3.82
4651 5299 0.106769 AAGACACACATGCCCACACA 60.107 50.000 0.00 0.00 0.00 3.72
4652 5300 0.106769 AGACACACATGCCCACACAA 60.107 50.000 0.00 0.00 0.00 3.33
4653 5301 0.961019 GACACACATGCCCACACAAT 59.039 50.000 0.00 0.00 0.00 2.71
4654 5302 0.675083 ACACACATGCCCACACAATG 59.325 50.000 0.00 0.00 0.00 2.82
4667 5315 4.743493 CCACACAATGGCCTATTTAACAC 58.257 43.478 3.32 0.00 43.24 3.32
4668 5316 4.219507 CCACACAATGGCCTATTTAACACA 59.780 41.667 3.32 0.00 43.24 3.72
4669 5317 5.401550 CACACAATGGCCTATTTAACACAG 58.598 41.667 3.32 0.00 0.00 3.66
4670 5318 4.462483 ACACAATGGCCTATTTAACACAGG 59.538 41.667 3.32 0.00 0.00 4.00
4677 5325 4.552166 CCTATTTAACACAGGCATTCGG 57.448 45.455 0.00 0.00 0.00 4.30
4678 5326 2.939460 ATTTAACACAGGCATTCGGC 57.061 45.000 0.00 0.00 43.74 5.54
4702 5350 7.416664 GGCCATTCTTATTTGCTCATCTTTGTA 60.417 37.037 0.00 0.00 0.00 2.41
4714 5362 7.530010 TGCTCATCTTTGTATAGCTGTTTTTC 58.470 34.615 0.00 0.00 34.28 2.29
4725 5373 3.238597 AGCTGTTTTTCTGGCCCATTAA 58.761 40.909 0.00 0.00 0.00 1.40
4753 5401 2.388735 CTGGATCCAGTAGGCTGTACA 58.611 52.381 30.55 0.00 41.02 2.90
4772 5420 6.954944 TGTACAAAGTGCAAAATCTACAGAC 58.045 36.000 0.00 0.00 0.00 3.51
4812 5488 5.062308 CAGTACTAAATCGTTTGGACTCTGC 59.938 44.000 0.00 0.00 0.00 4.26
4813 5489 4.273148 ACTAAATCGTTTGGACTCTGCT 57.727 40.909 2.01 0.00 0.00 4.24
4814 5490 4.642429 ACTAAATCGTTTGGACTCTGCTT 58.358 39.130 2.01 0.00 0.00 3.91
4815 5491 5.063880 ACTAAATCGTTTGGACTCTGCTTT 58.936 37.500 2.01 0.00 0.00 3.51
4816 5492 6.228258 ACTAAATCGTTTGGACTCTGCTTTA 58.772 36.000 2.01 0.00 0.00 1.85
4817 5493 5.358298 AAATCGTTTGGACTCTGCTTTAC 57.642 39.130 0.00 0.00 0.00 2.01
4818 5494 3.746045 TCGTTTGGACTCTGCTTTACT 57.254 42.857 0.00 0.00 0.00 2.24
4819 5495 4.859304 TCGTTTGGACTCTGCTTTACTA 57.141 40.909 0.00 0.00 0.00 1.82
4820 5496 5.204409 TCGTTTGGACTCTGCTTTACTAA 57.796 39.130 0.00 0.00 0.00 2.24
4821 5497 5.603596 TCGTTTGGACTCTGCTTTACTAAA 58.396 37.500 0.00 0.00 0.00 1.85
4822 5498 6.228258 TCGTTTGGACTCTGCTTTACTAAAT 58.772 36.000 0.00 0.00 0.00 1.40
4823 5499 7.380536 TCGTTTGGACTCTGCTTTACTAAATA 58.619 34.615 0.00 0.00 0.00 1.40
4824 5500 7.544566 TCGTTTGGACTCTGCTTTACTAAATAG 59.455 37.037 0.00 0.00 0.00 1.73
4840 5516 4.701956 AAATAGACCAGACGGCATTTTG 57.298 40.909 0.00 0.00 34.57 2.44
4886 5562 8.519526 TCGATTACAAAAGGAGTAAAATGCATT 58.480 29.630 5.99 5.99 35.33 3.56
4906 5582 8.450578 TGCATTATAAGACCTGAAACTATTGG 57.549 34.615 0.00 0.00 0.00 3.16
4915 5591 4.003648 CCTGAAACTATTGGAGGTGTGTC 58.996 47.826 0.00 0.00 0.00 3.67
4922 5598 6.374417 ACTATTGGAGGTGTGTCAGTTTAT 57.626 37.500 0.00 0.00 0.00 1.40
4925 5601 4.698201 TGGAGGTGTGTCAGTTTATTCA 57.302 40.909 0.00 0.00 0.00 2.57
4949 5625 9.290988 TCATATACCTTGAAAAGTGCAGTTTTA 57.709 29.630 27.78 15.17 44.25 1.52
4993 5669 4.098044 TGTTCATCTTAGGTCCTAAGCTCG 59.902 45.833 27.72 19.29 42.05 5.03
4997 5673 3.031736 TCTTAGGTCCTAAGCTCGCATT 58.968 45.455 27.72 0.00 42.05 3.56
4998 5674 3.068307 TCTTAGGTCCTAAGCTCGCATTC 59.932 47.826 27.72 0.00 42.05 2.67
4999 5675 0.103208 AGGTCCTAAGCTCGCATTCG 59.897 55.000 0.00 0.00 0.00 3.34
5003 5679 0.234106 CCTAAGCTCGCATTCGCATG 59.766 55.000 0.00 0.00 38.40 4.06
5004 5680 1.211743 CTAAGCTCGCATTCGCATGA 58.788 50.000 0.00 0.00 38.40 3.07
5005 5681 0.930310 TAAGCTCGCATTCGCATGAC 59.070 50.000 0.00 0.00 38.40 3.06
5006 5682 1.709147 AAGCTCGCATTCGCATGACC 61.709 55.000 0.00 0.00 38.40 4.02
5007 5683 2.463620 GCTCGCATTCGCATGACCA 61.464 57.895 0.00 0.00 38.40 4.02
5008 5684 1.640069 CTCGCATTCGCATGACCAG 59.360 57.895 0.00 0.00 38.40 4.00
5009 5685 1.079197 TCGCATTCGCATGACCAGT 60.079 52.632 0.00 0.00 38.40 4.00
5010 5686 1.061411 CGCATTCGCATGACCAGTG 59.939 57.895 0.00 0.00 38.40 3.66
5011 5687 1.638388 CGCATTCGCATGACCAGTGT 61.638 55.000 0.00 0.00 38.40 3.55
5012 5688 0.523072 GCATTCGCATGACCAGTGTT 59.477 50.000 0.00 0.00 38.36 3.32
5013 5689 1.730121 GCATTCGCATGACCAGTGTTG 60.730 52.381 0.00 0.00 38.36 3.33
5014 5690 1.805943 CATTCGCATGACCAGTGTTGA 59.194 47.619 0.00 0.00 31.07 3.18
5015 5691 2.183478 TTCGCATGACCAGTGTTGAT 57.817 45.000 0.00 0.00 0.00 2.57
5016 5692 1.725641 TCGCATGACCAGTGTTGATC 58.274 50.000 0.00 0.00 0.00 2.92
5024 5700 2.416547 GACCAGTGTTGATCCATTGACG 59.583 50.000 0.00 0.00 0.00 4.35
5029 5705 2.805671 GTGTTGATCCATTGACGTGTCA 59.194 45.455 0.00 0.00 37.91 3.58
5045 5721 0.598065 GTCACTTGGACCATTGCCAC 59.402 55.000 0.00 0.00 40.83 5.01
5048 5724 0.467290 ACTTGGACCATTGCCACGTT 60.467 50.000 0.00 0.00 34.63 3.99
5083 5759 3.558321 CCACAAGGTTAACGGATGAAGGA 60.558 47.826 9.90 0.00 0.00 3.36
5092 5768 6.293462 GGTTAACGGATGAAGGATAAAGATGC 60.293 42.308 0.00 0.00 0.00 3.91
5093 5769 4.422073 ACGGATGAAGGATAAAGATGCA 57.578 40.909 0.00 0.00 0.00 3.96
5124 5800 4.781934 ACTAAAGCATTACCCTGGTCATC 58.218 43.478 0.00 0.00 0.00 2.92
5141 5817 4.020617 CTCAGCCTCACCCCGCAA 62.021 66.667 0.00 0.00 0.00 4.85
5151 5827 1.210722 TCACCCCGCAATAGCATAACA 59.789 47.619 0.00 0.00 42.27 2.41
5153 5829 2.021457 ACCCCGCAATAGCATAACAAC 58.979 47.619 0.00 0.00 42.27 3.32
5163 5839 1.473258 GCATAACAACATGCTCCCCA 58.527 50.000 0.00 0.00 46.35 4.96
5164 5840 1.134946 GCATAACAACATGCTCCCCAC 59.865 52.381 0.00 0.00 46.35 4.61
5199 5875 1.953138 GGATGCATCACTCTCGCCG 60.953 63.158 27.25 0.00 0.00 6.46
5242 5927 1.005748 CTGCACGCTCCTCTGACAA 60.006 57.895 0.00 0.00 0.00 3.18
5275 5960 2.170187 CTGCTAGGTCTTCCATGAGCTT 59.830 50.000 0.00 0.00 43.46 3.74
5278 5963 1.366319 AGGTCTTCCATGAGCTTGGT 58.634 50.000 4.36 0.00 41.36 3.67
5280 5965 2.237392 AGGTCTTCCATGAGCTTGGTAC 59.763 50.000 4.36 2.50 41.36 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.181483 GGCTTGTCCTTGGCATTATCAAG 60.181 47.826 14.23 14.23 40.75 3.02
1 2 2.760092 GGCTTGTCCTTGGCATTATCAA 59.240 45.455 0.00 0.00 0.00 2.57
2 3 2.378038 GGCTTGTCCTTGGCATTATCA 58.622 47.619 0.00 0.00 0.00 2.15
3 4 1.334869 CGGCTTGTCCTTGGCATTATC 59.665 52.381 0.00 0.00 0.00 1.75
4 5 1.064758 TCGGCTTGTCCTTGGCATTAT 60.065 47.619 0.00 0.00 0.00 1.28
5 6 0.326595 TCGGCTTGTCCTTGGCATTA 59.673 50.000 0.00 0.00 0.00 1.90
6 7 0.323725 ATCGGCTTGTCCTTGGCATT 60.324 50.000 0.00 0.00 0.00 3.56
7 8 0.323725 AATCGGCTTGTCCTTGGCAT 60.324 50.000 0.00 0.00 0.00 4.40
8 9 1.074775 AATCGGCTTGTCCTTGGCA 59.925 52.632 0.00 0.00 0.00 4.92
9 10 1.244019 ACAATCGGCTTGTCCTTGGC 61.244 55.000 0.00 0.00 44.99 4.52
10 11 2.946947 ACAATCGGCTTGTCCTTGG 58.053 52.632 0.00 0.00 44.99 3.61
17 18 5.356882 TCAAAAGTAAGACAATCGGCTTG 57.643 39.130 0.00 0.00 40.90 4.01
18 19 5.705441 TCATCAAAAGTAAGACAATCGGCTT 59.295 36.000 0.00 0.00 0.00 4.35
19 20 5.245531 TCATCAAAAGTAAGACAATCGGCT 58.754 37.500 0.00 0.00 0.00 5.52
20 21 5.545658 TCATCAAAAGTAAGACAATCGGC 57.454 39.130 0.00 0.00 0.00 5.54
21 22 7.307493 TGATCATCAAAAGTAAGACAATCGG 57.693 36.000 0.00 0.00 0.00 4.18
36 37 6.204495 TGTCGTCAAGAACATTTGATCATCAA 59.796 34.615 0.00 0.00 39.13 2.57
37 38 5.700373 TGTCGTCAAGAACATTTGATCATCA 59.300 36.000 0.00 0.00 39.13 3.07
38 39 6.169419 TGTCGTCAAGAACATTTGATCATC 57.831 37.500 0.00 0.00 39.13 2.92
39 40 5.391310 GCTGTCGTCAAGAACATTTGATCAT 60.391 40.000 0.00 0.00 39.13 2.45
40 41 4.083855 GCTGTCGTCAAGAACATTTGATCA 60.084 41.667 0.00 0.00 39.13 2.92
41 42 4.398247 GCTGTCGTCAAGAACATTTGATC 58.602 43.478 0.00 0.00 39.13 2.92
42 43 3.120546 CGCTGTCGTCAAGAACATTTGAT 60.121 43.478 0.00 0.00 39.13 2.57
43 44 2.220824 CGCTGTCGTCAAGAACATTTGA 59.779 45.455 0.00 0.00 34.83 2.69
44 45 2.563976 CGCTGTCGTCAAGAACATTTG 58.436 47.619 0.00 0.00 0.00 2.32
45 46 1.531149 CCGCTGTCGTCAAGAACATTT 59.469 47.619 0.00 0.00 0.00 2.32
46 47 1.148310 CCGCTGTCGTCAAGAACATT 58.852 50.000 0.00 0.00 0.00 2.71
47 48 0.670546 CCCGCTGTCGTCAAGAACAT 60.671 55.000 0.00 0.00 0.00 2.71
48 49 1.300620 CCCGCTGTCGTCAAGAACA 60.301 57.895 0.00 0.00 0.00 3.18
49 50 0.389948 ATCCCGCTGTCGTCAAGAAC 60.390 55.000 0.00 0.00 0.00 3.01
50 51 1.179152 TATCCCGCTGTCGTCAAGAA 58.821 50.000 0.00 0.00 0.00 2.52
51 52 1.135199 GTTATCCCGCTGTCGTCAAGA 60.135 52.381 0.00 0.00 0.00 3.02
52 53 1.278238 GTTATCCCGCTGTCGTCAAG 58.722 55.000 0.00 0.00 0.00 3.02
53 54 0.457166 CGTTATCCCGCTGTCGTCAA 60.457 55.000 0.00 0.00 0.00 3.18
54 55 1.138036 CGTTATCCCGCTGTCGTCA 59.862 57.895 0.00 0.00 0.00 4.35
55 56 0.591741 CTCGTTATCCCGCTGTCGTC 60.592 60.000 0.00 0.00 0.00 4.20
56 57 1.432251 CTCGTTATCCCGCTGTCGT 59.568 57.895 0.00 0.00 0.00 4.34
57 58 1.944676 GCTCGTTATCCCGCTGTCG 60.945 63.158 0.00 0.00 0.00 4.35
58 59 0.666913 TAGCTCGTTATCCCGCTGTC 59.333 55.000 0.00 0.00 34.14 3.51
59 60 1.108776 TTAGCTCGTTATCCCGCTGT 58.891 50.000 0.00 0.00 34.14 4.40
60 61 2.061773 CATTAGCTCGTTATCCCGCTG 58.938 52.381 0.00 0.00 34.14 5.18
61 62 1.687123 ACATTAGCTCGTTATCCCGCT 59.313 47.619 0.00 0.00 36.56 5.52
62 63 2.150397 ACATTAGCTCGTTATCCCGC 57.850 50.000 0.00 0.00 0.00 6.13
63 64 4.227538 CAGTACATTAGCTCGTTATCCCG 58.772 47.826 0.00 0.00 0.00 5.14
64 65 4.982916 CACAGTACATTAGCTCGTTATCCC 59.017 45.833 0.00 0.00 0.00 3.85
65 66 5.828747 TCACAGTACATTAGCTCGTTATCC 58.171 41.667 0.00 0.00 0.00 2.59
66 67 6.074782 GCTTCACAGTACATTAGCTCGTTATC 60.075 42.308 0.00 0.00 0.00 1.75
67 68 5.749109 GCTTCACAGTACATTAGCTCGTTAT 59.251 40.000 0.00 0.00 0.00 1.89
68 69 5.100259 GCTTCACAGTACATTAGCTCGTTA 58.900 41.667 0.00 0.00 0.00 3.18
69 70 3.927142 GCTTCACAGTACATTAGCTCGTT 59.073 43.478 0.00 0.00 0.00 3.85
70 71 3.512680 GCTTCACAGTACATTAGCTCGT 58.487 45.455 0.00 0.00 0.00 4.18
71 72 2.860735 GGCTTCACAGTACATTAGCTCG 59.139 50.000 0.00 0.00 0.00 5.03
72 73 2.860735 CGGCTTCACAGTACATTAGCTC 59.139 50.000 0.00 0.00 0.00 4.09
73 74 2.233922 ACGGCTTCACAGTACATTAGCT 59.766 45.455 0.00 0.00 0.00 3.32
74 75 2.348666 CACGGCTTCACAGTACATTAGC 59.651 50.000 0.00 0.00 0.00 3.09
75 76 2.348666 GCACGGCTTCACAGTACATTAG 59.651 50.000 0.00 0.00 0.00 1.73
76 77 2.289133 TGCACGGCTTCACAGTACATTA 60.289 45.455 0.00 0.00 0.00 1.90
77 78 1.156736 GCACGGCTTCACAGTACATT 58.843 50.000 0.00 0.00 0.00 2.71
78 79 0.034756 TGCACGGCTTCACAGTACAT 59.965 50.000 0.00 0.00 0.00 2.29
79 80 0.034756 ATGCACGGCTTCACAGTACA 59.965 50.000 0.00 0.00 0.00 2.90
80 81 0.443869 CATGCACGGCTTCACAGTAC 59.556 55.000 0.00 0.00 0.00 2.73
81 82 0.034756 ACATGCACGGCTTCACAGTA 59.965 50.000 0.00 0.00 0.00 2.74
82 83 1.227943 ACATGCACGGCTTCACAGT 60.228 52.632 0.00 0.00 0.00 3.55
83 84 1.208358 CACATGCACGGCTTCACAG 59.792 57.895 0.00 0.00 0.00 3.66
84 85 0.606130 ATCACATGCACGGCTTCACA 60.606 50.000 0.00 0.00 0.00 3.58
85 86 0.097674 GATCACATGCACGGCTTCAC 59.902 55.000 0.00 0.00 0.00 3.18
86 87 1.360931 CGATCACATGCACGGCTTCA 61.361 55.000 0.00 0.00 0.00 3.02
87 88 1.083806 TCGATCACATGCACGGCTTC 61.084 55.000 0.00 0.00 0.00 3.86
88 89 0.462581 ATCGATCACATGCACGGCTT 60.463 50.000 0.00 0.00 0.00 4.35
89 90 1.144716 ATCGATCACATGCACGGCT 59.855 52.632 0.00 0.00 0.00 5.52
90 91 1.153597 TCATCGATCACATGCACGGC 61.154 55.000 0.00 0.00 0.00 5.68
112 113 6.073602 TGACGCATGATAGTGAAATATTGAGC 60.074 38.462 0.00 0.00 0.00 4.26
114 115 7.784633 TTGACGCATGATAGTGAAATATTGA 57.215 32.000 0.00 0.00 0.00 2.57
119 120 6.261603 ACATGATTGACGCATGATAGTGAAAT 59.738 34.615 10.22 0.00 44.49 2.17
133 134 3.064408 CCCAAGACATGACATGATTGACG 59.936 47.826 25.96 17.13 34.64 4.35
135 136 3.010472 ACCCCAAGACATGACATGATTGA 59.990 43.478 25.96 0.00 34.64 2.57
156 157 1.724582 GATACCAATGGGCGGTGCAC 61.725 60.000 8.80 8.80 37.33 4.57
157 158 1.453015 GATACCAATGGGCGGTGCA 60.453 57.895 3.55 0.00 37.33 4.57
158 159 1.152963 AGATACCAATGGGCGGTGC 60.153 57.895 3.55 0.00 37.33 5.01
159 160 0.535102 GGAGATACCAATGGGCGGTG 60.535 60.000 3.55 0.00 37.33 4.94
160 161 1.705997 GGGAGATACCAATGGGCGGT 61.706 60.000 3.55 0.00 41.20 5.68
161 162 1.073199 GGGAGATACCAATGGGCGG 59.927 63.158 3.55 0.00 41.20 6.13
169 170 7.208064 AGCTAATTAACTTTGGGAGATACCA 57.792 36.000 0.00 0.00 41.20 3.25
170 171 6.711194 GGAGCTAATTAACTTTGGGAGATACC 59.289 42.308 0.00 0.00 38.08 2.73
191 192 2.066999 CAGTAGGGGAGTGGGGAGC 61.067 68.421 0.00 0.00 0.00 4.70
209 210 1.740025 GTGTGAAGGTGCTAGGAATGC 59.260 52.381 0.00 0.00 0.00 3.56
213 214 1.419381 TGTGTGTGAAGGTGCTAGGA 58.581 50.000 0.00 0.00 0.00 2.94
223 224 0.036022 TCGCCATGGATGTGTGTGAA 59.964 50.000 18.40 0.00 0.00 3.18
256 261 2.089201 CTGCCATCTTGTTCATGCAGA 58.911 47.619 3.33 0.00 32.00 4.26
262 267 5.189736 ACCTATACTTCTGCCATCTTGTTCA 59.810 40.000 0.00 0.00 0.00 3.18
264 269 5.431765 CACCTATACTTCTGCCATCTTGTT 58.568 41.667 0.00 0.00 0.00 2.83
267 272 3.392616 CCCACCTATACTTCTGCCATCTT 59.607 47.826 0.00 0.00 0.00 2.40
305 310 1.019673 CTGTCTTTGATGGGCATCCG 58.980 55.000 0.00 0.00 37.02 4.18
306 311 2.134789 ACTGTCTTTGATGGGCATCC 57.865 50.000 0.00 0.00 37.02 3.51
318 323 6.749036 TCCTCCTTTTTCTTCTACTGTCTT 57.251 37.500 0.00 0.00 0.00 3.01
343 348 4.082026 GTGCTAGTGCCCATGAATCTTTTT 60.082 41.667 0.00 0.00 38.71 1.94
344 349 3.445096 GTGCTAGTGCCCATGAATCTTTT 59.555 43.478 0.00 0.00 38.71 2.27
345 350 3.019564 GTGCTAGTGCCCATGAATCTTT 58.980 45.455 0.00 0.00 38.71 2.52
346 351 2.648059 GTGCTAGTGCCCATGAATCTT 58.352 47.619 0.00 0.00 38.71 2.40
347 352 1.133976 GGTGCTAGTGCCCATGAATCT 60.134 52.381 0.00 0.00 38.71 2.40
348 353 1.312815 GGTGCTAGTGCCCATGAATC 58.687 55.000 0.00 0.00 38.71 2.52
349 354 0.106519 GGGTGCTAGTGCCCATGAAT 60.107 55.000 15.91 0.00 44.23 2.57
350 355 1.302949 GGGTGCTAGTGCCCATGAA 59.697 57.895 15.91 0.00 44.23 2.57
351 356 2.998097 GGGTGCTAGTGCCCATGA 59.002 61.111 15.91 0.00 44.23 3.07
355 360 3.009115 TCCTGGGTGCTAGTGCCC 61.009 66.667 14.48 14.48 45.04 5.36
356 361 1.915078 ATGTCCTGGGTGCTAGTGCC 61.915 60.000 0.00 0.00 38.71 5.01
357 362 0.830648 TATGTCCTGGGTGCTAGTGC 59.169 55.000 0.00 0.00 40.20 4.40
358 363 2.111384 ACTATGTCCTGGGTGCTAGTG 58.889 52.381 0.00 0.00 0.00 2.74
359 364 2.552093 ACTATGTCCTGGGTGCTAGT 57.448 50.000 0.00 0.00 0.00 2.57
360 365 3.914426 AAACTATGTCCTGGGTGCTAG 57.086 47.619 0.00 0.00 0.00 3.42
361 366 5.968676 ATAAAACTATGTCCTGGGTGCTA 57.031 39.130 0.00 0.00 0.00 3.49
362 367 4.862641 ATAAAACTATGTCCTGGGTGCT 57.137 40.909 0.00 0.00 0.00 4.40
363 368 7.399245 TTTTATAAAACTATGTCCTGGGTGC 57.601 36.000 6.54 0.00 0.00 5.01
386 391 0.322187 CTCACCCCGGATCGGTTTTT 60.322 55.000 0.73 0.00 46.80 1.94
387 392 1.298667 CTCACCCCGGATCGGTTTT 59.701 57.895 0.73 0.00 46.80 2.43
388 393 2.666098 CCTCACCCCGGATCGGTTT 61.666 63.158 0.73 0.00 46.80 3.27
389 394 3.081409 CCTCACCCCGGATCGGTT 61.081 66.667 0.73 0.00 46.80 4.44
392 397 4.530857 GTGCCTCACCCCGGATCG 62.531 72.222 0.73 0.00 0.00 3.69
401 406 3.552890 GGTTGAATTTTCTGGTGCCTCAC 60.553 47.826 0.00 0.00 0.00 3.51
402 407 2.627699 GGTTGAATTTTCTGGTGCCTCA 59.372 45.455 0.00 0.00 0.00 3.86
403 408 2.029020 GGGTTGAATTTTCTGGTGCCTC 60.029 50.000 0.00 0.00 0.00 4.70
404 409 1.970640 GGGTTGAATTTTCTGGTGCCT 59.029 47.619 0.00 0.00 0.00 4.75
405 410 1.001974 GGGGTTGAATTTTCTGGTGCC 59.998 52.381 0.00 0.00 0.00 5.01
406 411 1.336795 CGGGGTTGAATTTTCTGGTGC 60.337 52.381 0.00 0.00 0.00 5.01
407 412 2.030274 GTCGGGGTTGAATTTTCTGGTG 60.030 50.000 0.00 0.00 0.00 4.17
408 413 2.235891 GTCGGGGTTGAATTTTCTGGT 58.764 47.619 0.00 0.00 0.00 4.00
409 414 1.199097 CGTCGGGGTTGAATTTTCTGG 59.801 52.381 0.00 0.00 0.00 3.86
410 415 1.199097 CCGTCGGGGTTGAATTTTCTG 59.801 52.381 2.34 0.00 0.00 3.02
411 416 1.530323 CCGTCGGGGTTGAATTTTCT 58.470 50.000 2.34 0.00 0.00 2.52
424 429 2.202837 GGATTCGAACCCCGTCGG 60.203 66.667 3.60 3.60 41.43 4.79
425 430 1.518572 CAGGATTCGAACCCCGTCG 60.519 63.158 4.42 0.00 42.48 5.12
426 431 1.153429 CCAGGATTCGAACCCCGTC 60.153 63.158 4.42 0.00 39.75 4.79
427 432 2.987125 CCAGGATTCGAACCCCGT 59.013 61.111 4.42 0.00 39.75 5.28
428 433 2.513897 GCCAGGATTCGAACCCCG 60.514 66.667 4.42 0.00 40.25 5.73
429 434 2.124278 GGCCAGGATTCGAACCCC 60.124 66.667 4.42 7.64 0.00 4.95
430 435 2.513897 CGGCCAGGATTCGAACCC 60.514 66.667 0.00 0.00 0.00 4.11
431 436 3.202706 GCGGCCAGGATTCGAACC 61.203 66.667 2.24 4.22 0.00 3.62
432 437 1.982073 CTTGCGGCCAGGATTCGAAC 61.982 60.000 2.24 0.00 0.00 3.95
433 438 1.745115 CTTGCGGCCAGGATTCGAA 60.745 57.895 2.24 0.00 0.00 3.71
434 439 2.125147 CTTGCGGCCAGGATTCGA 60.125 61.111 2.24 0.00 0.00 3.71
435 440 3.204827 CCTTGCGGCCAGGATTCG 61.205 66.667 14.66 0.00 0.00 3.34
436 441 2.044946 ACCTTGCGGCCAGGATTC 60.045 61.111 25.32 0.00 0.00 2.52
437 442 2.361610 CACCTTGCGGCCAGGATT 60.362 61.111 25.32 2.22 0.00 3.01
438 443 3.329889 TCACCTTGCGGCCAGGAT 61.330 61.111 25.32 8.06 0.00 3.24
439 444 4.020617 CTCACCTTGCGGCCAGGA 62.021 66.667 25.32 4.33 0.00 3.86
444 449 3.512516 GATGGCTCACCTTGCGGC 61.513 66.667 0.00 0.00 36.63 6.53
445 450 2.825836 GGATGGCTCACCTTGCGG 60.826 66.667 0.00 0.00 36.63 5.69
446 451 1.377725 AAGGATGGCTCACCTTGCG 60.378 57.895 8.95 0.00 43.69 4.85
447 452 4.751431 AAGGATGGCTCACCTTGC 57.249 55.556 8.95 0.00 43.69 4.01
449 454 4.751431 GCAAGGATGGCTCACCTT 57.249 55.556 0.00 0.00 45.87 3.50
457 462 2.766263 TGTAGTCTAGTGGCAAGGATGG 59.234 50.000 0.00 0.00 0.00 3.51
458 463 3.739519 GCTGTAGTCTAGTGGCAAGGATG 60.740 52.174 0.00 0.00 0.00 3.51
459 464 2.432510 GCTGTAGTCTAGTGGCAAGGAT 59.567 50.000 0.00 0.00 0.00 3.24
460 465 1.825474 GCTGTAGTCTAGTGGCAAGGA 59.175 52.381 0.00 0.00 0.00 3.36
461 466 1.134670 GGCTGTAGTCTAGTGGCAAGG 60.135 57.143 0.00 0.00 0.00 3.61
462 467 1.827969 AGGCTGTAGTCTAGTGGCAAG 59.172 52.381 0.00 0.00 0.00 4.01
463 468 1.938585 AGGCTGTAGTCTAGTGGCAA 58.061 50.000 0.00 0.00 0.00 4.52
464 469 2.656002 CTAGGCTGTAGTCTAGTGGCA 58.344 52.381 11.46 0.00 43.44 4.92
470 475 4.857130 TTGAGGACTAGGCTGTAGTCTA 57.143 45.455 19.69 9.25 42.54 2.59
471 476 3.741245 TTGAGGACTAGGCTGTAGTCT 57.259 47.619 19.69 10.46 42.54 3.24
472 477 4.382147 CCTTTTGAGGACTAGGCTGTAGTC 60.382 50.000 14.85 14.85 42.28 2.59
473 478 3.515901 CCTTTTGAGGACTAGGCTGTAGT 59.484 47.826 0.00 0.00 0.00 2.73
474 479 3.769844 TCCTTTTGAGGACTAGGCTGTAG 59.230 47.826 0.00 0.00 32.09 2.74
475 480 3.769844 CTCCTTTTGAGGACTAGGCTGTA 59.230 47.826 0.00 0.00 37.45 2.74
476 481 2.569404 CTCCTTTTGAGGACTAGGCTGT 59.431 50.000 0.00 0.00 37.45 4.40
477 482 3.258971 CTCCTTTTGAGGACTAGGCTG 57.741 52.381 0.00 0.00 37.45 4.85
487 492 2.639839 TCTCCTGGTTCCTCCTTTTGAG 59.360 50.000 0.00 0.00 41.07 3.02
488 493 2.701551 TCTCCTGGTTCCTCCTTTTGA 58.298 47.619 0.00 0.00 37.07 2.69
489 494 3.009473 TCATCTCCTGGTTCCTCCTTTTG 59.991 47.826 0.00 0.00 37.07 2.44
490 495 3.260205 TCATCTCCTGGTTCCTCCTTTT 58.740 45.455 0.00 0.00 37.07 2.27
491 496 2.843113 CTCATCTCCTGGTTCCTCCTTT 59.157 50.000 0.00 0.00 37.07 3.11
492 497 2.045047 TCTCATCTCCTGGTTCCTCCTT 59.955 50.000 0.00 0.00 37.07 3.36
493 498 1.648568 TCTCATCTCCTGGTTCCTCCT 59.351 52.381 0.00 0.00 37.07 3.69
494 499 2.166907 TCTCATCTCCTGGTTCCTCC 57.833 55.000 0.00 0.00 0.00 4.30
495 500 2.368221 CCATCTCATCTCCTGGTTCCTC 59.632 54.545 0.00 0.00 0.00 3.71
496 501 2.022625 TCCATCTCATCTCCTGGTTCCT 60.023 50.000 0.00 0.00 0.00 3.36
497 502 2.368221 CTCCATCTCATCTCCTGGTTCC 59.632 54.545 0.00 0.00 0.00 3.62
498 503 3.303938 TCTCCATCTCATCTCCTGGTTC 58.696 50.000 0.00 0.00 0.00 3.62
499 504 3.052262 TCTCTCCATCTCATCTCCTGGTT 60.052 47.826 0.00 0.00 0.00 3.67
504 509 7.664552 ATAATCATCTCTCCATCTCATCTCC 57.335 40.000 0.00 0.00 0.00 3.71
516 521 7.876582 TGATCCATGTGTCAATAATCATCTCTC 59.123 37.037 0.00 0.00 0.00 3.20
536 566 5.130477 GGGGTTTTAGACTAGTCATGATCCA 59.870 44.000 24.44 0.00 0.00 3.41
546 576 6.877855 GGTTTAGACAAGGGGTTTTAGACTAG 59.122 42.308 0.00 0.00 0.00 2.57
547 577 6.559921 AGGTTTAGACAAGGGGTTTTAGACTA 59.440 38.462 0.00 0.00 0.00 2.59
563 593 1.719780 CGTGCGACAAGAGGTTTAGAC 59.280 52.381 0.00 0.00 0.00 2.59
566 596 2.060326 CTCGTGCGACAAGAGGTTTA 57.940 50.000 12.42 0.00 36.59 2.01
568 598 4.655527 CTCGTGCGACAAGAGGTT 57.344 55.556 12.42 0.00 36.59 3.50
571 601 0.526524 GATCCCTCGTGCGACAAGAG 60.527 60.000 13.02 13.02 39.13 2.85
572 602 1.248101 TGATCCCTCGTGCGACAAGA 61.248 55.000 0.00 0.00 0.00 3.02
573 603 0.803768 CTGATCCCTCGTGCGACAAG 60.804 60.000 0.00 0.00 0.00 3.16
574 604 1.215382 CTGATCCCTCGTGCGACAA 59.785 57.895 0.00 0.00 0.00 3.18
575 605 1.657751 CTCTGATCCCTCGTGCGACA 61.658 60.000 0.00 0.00 0.00 4.35
576 606 1.064946 CTCTGATCCCTCGTGCGAC 59.935 63.158 0.00 0.00 0.00 5.19
577 607 0.965866 AACTCTGATCCCTCGTGCGA 60.966 55.000 0.00 0.00 0.00 5.10
579 609 0.247736 ACAACTCTGATCCCTCGTGC 59.752 55.000 0.00 0.00 0.00 5.34
580 610 1.134965 GGACAACTCTGATCCCTCGTG 60.135 57.143 0.00 0.00 0.00 4.35
581 611 1.187087 GGACAACTCTGATCCCTCGT 58.813 55.000 0.00 0.00 0.00 4.18
582 612 0.101399 CGGACAACTCTGATCCCTCG 59.899 60.000 0.00 0.00 0.00 4.63
583 613 0.461961 CCGGACAACTCTGATCCCTC 59.538 60.000 0.00 0.00 0.00 4.30
584 614 0.041238 TCCGGACAACTCTGATCCCT 59.959 55.000 0.00 0.00 0.00 4.20
585 615 1.123928 ATCCGGACAACTCTGATCCC 58.876 55.000 6.12 0.00 0.00 3.85
586 616 2.288518 GCTATCCGGACAACTCTGATCC 60.289 54.545 6.12 0.00 0.00 3.36
587 617 2.362397 TGCTATCCGGACAACTCTGATC 59.638 50.000 6.12 0.00 0.00 2.92
588 618 2.363680 CTGCTATCCGGACAACTCTGAT 59.636 50.000 6.12 0.00 0.00 2.90
589 619 1.751351 CTGCTATCCGGACAACTCTGA 59.249 52.381 6.12 0.00 0.00 3.27
590 620 1.478510 ACTGCTATCCGGACAACTCTG 59.521 52.381 6.12 1.38 0.00 3.35
591 621 1.478510 CACTGCTATCCGGACAACTCT 59.521 52.381 6.12 0.00 0.00 3.24
592 622 1.927895 CACTGCTATCCGGACAACTC 58.072 55.000 6.12 0.00 0.00 3.01
593 623 0.108138 GCACTGCTATCCGGACAACT 60.108 55.000 6.12 0.00 0.00 3.16
594 624 0.391130 TGCACTGCTATCCGGACAAC 60.391 55.000 6.12 0.00 0.00 3.32
595 625 0.323302 TTGCACTGCTATCCGGACAA 59.677 50.000 6.12 0.00 0.00 3.18
596 626 0.323302 TTTGCACTGCTATCCGGACA 59.677 50.000 6.12 0.00 0.00 4.02
597 627 1.448985 TTTTGCACTGCTATCCGGAC 58.551 50.000 6.12 0.00 0.00 4.79
598 628 2.192664 TTTTTGCACTGCTATCCGGA 57.807 45.000 6.61 6.61 0.00 5.14
599 629 3.119531 TCAATTTTTGCACTGCTATCCGG 60.120 43.478 0.00 0.00 0.00 5.14
600 630 4.095410 TCAATTTTTGCACTGCTATCCG 57.905 40.909 1.98 0.00 0.00 4.18
601 631 4.427312 CCTCAATTTTTGCACTGCTATCC 58.573 43.478 1.98 0.00 0.00 2.59
602 632 4.158394 TCCCTCAATTTTTGCACTGCTATC 59.842 41.667 1.98 0.00 0.00 2.08
603 633 4.088634 TCCCTCAATTTTTGCACTGCTAT 58.911 39.130 1.98 0.00 0.00 2.97
604 634 3.495331 TCCCTCAATTTTTGCACTGCTA 58.505 40.909 1.98 0.00 0.00 3.49
605 635 2.318908 TCCCTCAATTTTTGCACTGCT 58.681 42.857 1.98 0.00 0.00 4.24
606 636 2.818130 TCCCTCAATTTTTGCACTGC 57.182 45.000 0.00 0.00 0.00 4.40
607 637 4.524316 TCATCCCTCAATTTTTGCACTG 57.476 40.909 0.00 0.00 0.00 3.66
608 638 5.299949 GTTTCATCCCTCAATTTTTGCACT 58.700 37.500 0.00 0.00 0.00 4.40
609 639 4.452114 GGTTTCATCCCTCAATTTTTGCAC 59.548 41.667 0.00 0.00 0.00 4.57
610 640 4.102210 TGGTTTCATCCCTCAATTTTTGCA 59.898 37.500 0.00 0.00 0.00 4.08
653 683 0.317160 AACTGATCGACAAGTGCGGA 59.683 50.000 2.76 0.00 0.00 5.54
654 684 0.439985 CAACTGATCGACAAGTGCGG 59.560 55.000 2.76 0.00 0.00 5.69
655 685 1.418373 TCAACTGATCGACAAGTGCG 58.582 50.000 2.76 0.00 0.00 5.34
656 686 4.177026 ACTATCAACTGATCGACAAGTGC 58.823 43.478 2.76 0.00 36.05 4.40
780 829 0.525668 CACGGTGCTTAGCCTAGTCG 60.526 60.000 0.29 1.24 0.00 4.18
781 830 0.531200 ACACGGTGCTTAGCCTAGTC 59.469 55.000 8.30 0.00 0.00 2.59
782 831 0.531200 GACACGGTGCTTAGCCTAGT 59.469 55.000 8.30 0.00 0.00 2.57
783 832 0.530744 TGACACGGTGCTTAGCCTAG 59.469 55.000 8.30 0.00 0.00 3.02
786 835 1.421410 CGATGACACGGTGCTTAGCC 61.421 60.000 8.30 0.00 0.00 3.93
787 836 0.736325 ACGATGACACGGTGCTTAGC 60.736 55.000 8.30 0.00 37.61 3.09
788 837 2.554806 TACGATGACACGGTGCTTAG 57.445 50.000 8.30 3.16 37.61 2.18
789 838 4.276431 TGATATACGATGACACGGTGCTTA 59.724 41.667 8.30 0.00 37.61 3.09
790 839 3.067601 TGATATACGATGACACGGTGCTT 59.932 43.478 8.30 0.00 37.61 3.91
791 840 2.621526 TGATATACGATGACACGGTGCT 59.378 45.455 8.30 0.00 37.61 4.40
792 841 2.980476 CTGATATACGATGACACGGTGC 59.020 50.000 8.30 1.81 37.61 5.01
835 987 4.223320 TGGTGAGATTTTGTTTTCTCGC 57.777 40.909 5.20 5.20 44.81 5.03
1059 1212 3.934962 GAGGATCAGGGGAGCGGC 61.935 72.222 0.00 0.00 33.17 6.53
1073 1226 4.180946 CAGGGCGACGAGACGAGG 62.181 72.222 0.00 0.00 35.09 4.63
1099 1252 3.420222 CTACCGAACGTGCATGCGC 62.420 63.158 21.37 21.37 39.24 6.09
1100 1256 2.695055 CTACCGAACGTGCATGCG 59.305 61.111 14.09 1.59 37.94 4.73
1130 1286 2.436646 ATTTCAGGACGGCAGCGG 60.437 61.111 0.00 0.00 0.00 5.52
1134 1290 2.779755 ACATACATTTCAGGACGGCA 57.220 45.000 0.00 0.00 0.00 5.69
1164 1323 1.005037 CTCCTGCAACACGTAGCCA 60.005 57.895 4.64 0.00 0.00 4.75
1165 1324 1.741770 CCTCCTGCAACACGTAGCC 60.742 63.158 4.64 0.00 0.00 3.93
1166 1325 2.391389 GCCTCCTGCAACACGTAGC 61.391 63.158 0.00 0.00 40.77 3.58
1320 1482 0.173708 GCGTTCTTCTCCACCGAGAT 59.826 55.000 0.00 0.00 44.68 2.75
1321 1483 1.585006 GCGTTCTTCTCCACCGAGA 59.415 57.895 0.00 0.00 43.62 4.04
1322 1484 1.801913 CGCGTTCTTCTCCACCGAG 60.802 63.158 0.00 0.00 37.48 4.63
1323 1485 2.257371 CGCGTTCTTCTCCACCGA 59.743 61.111 0.00 0.00 0.00 4.69
1324 1486 2.809601 CCGCGTTCTTCTCCACCG 60.810 66.667 4.92 0.00 0.00 4.94
1327 1489 0.105224 TGAAACCGCGTTCTTCTCCA 59.895 50.000 4.92 0.00 0.00 3.86
1328 1490 0.790814 CTGAAACCGCGTTCTTCTCC 59.209 55.000 4.92 0.00 0.00 3.71
1354 1524 2.101783 AGCGCCATGAAAAATGGATCA 58.898 42.857 2.29 0.00 41.64 2.92
1371 1541 2.026014 GCAAACCCACACACAGCG 59.974 61.111 0.00 0.00 0.00 5.18
1954 2134 6.773976 ATGAGAAAGTGTTTGAGTGGAAAA 57.226 33.333 0.00 0.00 0.00 2.29
1958 2138 6.204359 CAAGAATGAGAAAGTGTTTGAGTGG 58.796 40.000 0.00 0.00 0.00 4.00
1959 2139 6.204359 CCAAGAATGAGAAAGTGTTTGAGTG 58.796 40.000 0.00 0.00 0.00 3.51
1960 2140 5.221126 GCCAAGAATGAGAAAGTGTTTGAGT 60.221 40.000 0.00 0.00 0.00 3.41
1961 2141 5.009410 AGCCAAGAATGAGAAAGTGTTTGAG 59.991 40.000 0.00 0.00 0.00 3.02
1962 2142 4.889409 AGCCAAGAATGAGAAAGTGTTTGA 59.111 37.500 0.00 0.00 0.00 2.69
1963 2143 4.980434 CAGCCAAGAATGAGAAAGTGTTTG 59.020 41.667 0.00 0.00 0.00 2.93
2005 2187 4.858433 CGACGACGCGGCCCATTA 62.858 66.667 12.47 0.00 0.00 1.90
2011 2193 4.191485 CATTCACGACGACGCGGC 62.191 66.667 12.47 6.41 43.96 6.53
2015 2197 0.628781 CTCGAACATTCACGACGACG 59.371 55.000 5.58 5.58 45.75 5.12
2016 2198 0.362512 GCTCGAACATTCACGACGAC 59.637 55.000 0.00 0.00 34.82 4.34
2021 2215 1.126846 GAACCTGCTCGAACATTCACG 59.873 52.381 0.00 0.00 0.00 4.35
2421 2615 0.811915 CGTCCTGATTCTCAGTCCGT 59.188 55.000 3.65 0.00 42.80 4.69
2433 2627 4.492160 GCGTCGATGGCGTCCTGA 62.492 66.667 6.79 0.00 38.98 3.86
2520 2714 1.838568 GCTTGTCGACGGGGTTGAAC 61.839 60.000 11.62 0.00 0.00 3.18
3282 3497 2.364448 AGGAGGAAGCCGAGGACC 60.364 66.667 0.00 0.00 0.00 4.46
3516 3731 2.865079 TGAGAGACCGTGAAGAAGTCT 58.135 47.619 0.00 0.00 43.42 3.24
3558 3898 4.081697 TGGCGTATGCATGTATATGTAGCT 60.082 41.667 20.06 0.00 45.35 3.32
3567 3920 1.594021 CCGCTGGCGTATGCATGTA 60.594 57.895 10.16 0.00 45.35 2.29
3569 3922 4.318021 GCCGCTGGCGTATGCATG 62.318 66.667 10.16 1.64 45.35 4.06
3624 3989 4.778904 TCTGCAACGTTTACATAGCAAAC 58.221 39.130 9.59 0.00 33.47 2.93
3625 3990 4.513692 ACTCTGCAACGTTTACATAGCAAA 59.486 37.500 9.59 0.00 0.00 3.68
3626 3991 4.062293 ACTCTGCAACGTTTACATAGCAA 58.938 39.130 9.59 2.04 0.00 3.91
3629 3994 5.577164 AGCTTACTCTGCAACGTTTACATAG 59.423 40.000 0.00 5.05 0.00 2.23
3630 3995 5.475719 AGCTTACTCTGCAACGTTTACATA 58.524 37.500 0.00 0.00 0.00 2.29
3631 3996 4.315803 AGCTTACTCTGCAACGTTTACAT 58.684 39.130 0.00 0.00 0.00 2.29
3632 3997 3.724374 AGCTTACTCTGCAACGTTTACA 58.276 40.909 0.00 0.00 0.00 2.41
3633 3998 3.123116 GGAGCTTACTCTGCAACGTTTAC 59.877 47.826 0.00 0.00 42.98 2.01
3634 3999 3.243941 TGGAGCTTACTCTGCAACGTTTA 60.244 43.478 0.00 0.00 42.98 2.01
3635 4000 2.143925 GGAGCTTACTCTGCAACGTTT 58.856 47.619 0.00 0.00 42.98 3.60
3636 4001 1.070134 TGGAGCTTACTCTGCAACGTT 59.930 47.619 0.00 0.00 42.98 3.99
3647 4012 2.033194 GGGTGCACGTGGAGCTTAC 61.033 63.158 32.96 16.94 34.23 2.34
3801 4166 4.408821 ATCTGCGCCGCCAGGAAA 62.409 61.111 6.63 0.00 41.02 3.13
4312 4838 9.832445 TTTTATAGCTAAACCAAAGATCGATCT 57.168 29.630 22.32 22.32 39.22 2.75
4340 4887 5.197451 CAGTATCCTGAGTTCCTGACTAGT 58.803 45.833 0.00 0.00 41.50 2.57
4341 4888 4.037446 GCAGTATCCTGAGTTCCTGACTAG 59.963 50.000 0.00 0.00 41.50 2.57
4466 5024 9.725019 CAATATCCAACAATCCTAGCTACAATA 57.275 33.333 0.00 0.00 0.00 1.90
4467 5025 8.220559 ACAATATCCAACAATCCTAGCTACAAT 58.779 33.333 0.00 0.00 0.00 2.71
4468 5026 7.573710 ACAATATCCAACAATCCTAGCTACAA 58.426 34.615 0.00 0.00 0.00 2.41
4469 5027 7.136822 ACAATATCCAACAATCCTAGCTACA 57.863 36.000 0.00 0.00 0.00 2.74
4470 5028 8.585881 TCTACAATATCCAACAATCCTAGCTAC 58.414 37.037 0.00 0.00 0.00 3.58
4471 5029 8.721133 TCTACAATATCCAACAATCCTAGCTA 57.279 34.615 0.00 0.00 0.00 3.32
4472 5030 7.618019 TCTACAATATCCAACAATCCTAGCT 57.382 36.000 0.00 0.00 0.00 3.32
4473 5031 8.854614 ATTCTACAATATCCAACAATCCTAGC 57.145 34.615 0.00 0.00 0.00 3.42
4508 5072 5.777802 AGAGACGGTATAGCAATGATCTTG 58.222 41.667 2.37 0.00 0.00 3.02
4561 5127 6.313744 AGAATTTAGTCAAGGTTCCAAACG 57.686 37.500 0.00 0.00 0.00 3.60
4562 5128 8.504815 GTCTAGAATTTAGTCAAGGTTCCAAAC 58.495 37.037 0.00 0.00 0.00 2.93
4564 5130 7.166167 GGTCTAGAATTTAGTCAAGGTTCCAA 58.834 38.462 0.00 0.00 0.00 3.53
4565 5131 6.271391 TGGTCTAGAATTTAGTCAAGGTTCCA 59.729 38.462 0.00 0.00 0.00 3.53
4566 5132 6.708285 TGGTCTAGAATTTAGTCAAGGTTCC 58.292 40.000 0.00 0.00 0.00 3.62
4567 5133 6.819146 CCTGGTCTAGAATTTAGTCAAGGTTC 59.181 42.308 0.00 0.00 0.00 3.62
4570 5136 5.119694 GCCTGGTCTAGAATTTAGTCAAGG 58.880 45.833 0.00 0.00 0.00 3.61
4592 5238 2.368655 AAGAAATGGTGAAATGCCGC 57.631 45.000 0.00 0.00 0.00 6.53
4613 5261 7.042321 TGTGTCTTCGTTGTAATCGATTTTTCT 60.042 33.333 17.19 0.00 37.18 2.52
4622 5270 4.394795 GCATGTGTGTCTTCGTTGTAATC 58.605 43.478 0.00 0.00 0.00 1.75
4626 5274 0.944386 GGCATGTGTGTCTTCGTTGT 59.056 50.000 0.00 0.00 0.00 3.32
4635 5283 0.675083 CATTGTGTGGGCATGTGTGT 59.325 50.000 0.00 0.00 0.00 3.72
4646 5294 5.384063 TGTGTTAAATAGGCCATTGTGTG 57.616 39.130 5.01 0.00 0.00 3.82
4647 5295 4.462483 CCTGTGTTAAATAGGCCATTGTGT 59.538 41.667 5.01 0.00 0.00 3.72
4648 5296 4.997565 CCTGTGTTAAATAGGCCATTGTG 58.002 43.478 5.01 0.00 0.00 3.33
4656 5304 3.243068 GCCGAATGCCTGTGTTAAATAGG 60.243 47.826 0.00 0.00 34.67 2.57
4657 5305 3.952535 GCCGAATGCCTGTGTTAAATAG 58.047 45.455 0.00 0.00 0.00 1.73
4659 5307 2.939460 GCCGAATGCCTGTGTTAAAT 57.061 45.000 0.00 0.00 0.00 1.40
4670 5318 2.796593 GCAAATAAGAATGGCCGAATGC 59.203 45.455 0.00 0.00 40.16 3.56
4671 5319 4.202040 TGAGCAAATAAGAATGGCCGAATG 60.202 41.667 0.00 0.00 0.00 2.67
4672 5320 3.953612 TGAGCAAATAAGAATGGCCGAAT 59.046 39.130 0.00 0.00 0.00 3.34
4673 5321 3.351740 TGAGCAAATAAGAATGGCCGAA 58.648 40.909 0.00 0.00 0.00 4.30
4674 5322 2.997980 TGAGCAAATAAGAATGGCCGA 58.002 42.857 0.00 0.00 0.00 5.54
4675 5323 3.567164 AGATGAGCAAATAAGAATGGCCG 59.433 43.478 0.00 0.00 0.00 6.13
4676 5324 5.526506 AAGATGAGCAAATAAGAATGGCC 57.473 39.130 0.00 0.00 0.00 5.36
4677 5325 6.335777 ACAAAGATGAGCAAATAAGAATGGC 58.664 36.000 0.00 0.00 0.00 4.40
4681 5329 9.618890 AGCTATACAAAGATGAGCAAATAAGAA 57.381 29.630 0.00 0.00 35.55 2.52
4682 5330 9.049523 CAGCTATACAAAGATGAGCAAATAAGA 57.950 33.333 0.00 0.00 34.81 2.10
4683 5331 8.834465 ACAGCTATACAAAGATGAGCAAATAAG 58.166 33.333 0.00 0.00 36.39 1.73
4684 5332 8.737168 ACAGCTATACAAAGATGAGCAAATAA 57.263 30.769 0.00 0.00 36.39 1.40
4685 5333 8.737168 AACAGCTATACAAAGATGAGCAAATA 57.263 30.769 0.00 0.00 36.39 1.40
4686 5334 7.636150 AACAGCTATACAAAGATGAGCAAAT 57.364 32.000 0.00 0.00 36.39 2.32
4687 5335 7.452880 AAACAGCTATACAAAGATGAGCAAA 57.547 32.000 0.00 0.00 36.39 3.68
4688 5336 7.452880 AAAACAGCTATACAAAGATGAGCAA 57.547 32.000 0.00 0.00 36.39 3.91
4702 5350 2.603075 TGGGCCAGAAAAACAGCTAT 57.397 45.000 0.00 0.00 0.00 2.97
4714 5362 0.753111 GCCAGAGGTTAATGGGCCAG 60.753 60.000 13.78 0.00 38.70 4.85
4742 5390 4.561735 TTTTGCACTTTGTACAGCCTAC 57.438 40.909 0.00 0.00 0.00 3.18
4746 5394 5.757886 TGTAGATTTTGCACTTTGTACAGC 58.242 37.500 0.00 0.00 0.00 4.40
4753 5401 6.449635 TGTTGTCTGTAGATTTTGCACTTT 57.550 33.333 0.00 0.00 0.00 2.66
4772 5420 9.651913 ATTTAGTACTGGGCATTTAAAATGTTG 57.348 29.630 5.39 0.00 0.00 3.33
4785 5433 3.373130 GTCCAAACGATTTAGTACTGGGC 59.627 47.826 5.39 0.00 31.65 5.36
4812 5488 5.657474 TGCCGTCTGGTCTATTTAGTAAAG 58.343 41.667 1.21 0.00 37.67 1.85
4813 5489 5.664294 TGCCGTCTGGTCTATTTAGTAAA 57.336 39.130 0.00 0.00 37.67 2.01
4814 5490 5.864418 ATGCCGTCTGGTCTATTTAGTAA 57.136 39.130 0.00 0.00 37.67 2.24
4815 5491 5.864418 AATGCCGTCTGGTCTATTTAGTA 57.136 39.130 0.00 0.00 37.67 1.82
4816 5492 4.755266 AATGCCGTCTGGTCTATTTAGT 57.245 40.909 0.00 0.00 37.67 2.24
4817 5493 5.730568 GCAAAATGCCGTCTGGTCTATTTAG 60.731 44.000 0.00 0.00 37.42 1.85
4818 5494 4.095782 GCAAAATGCCGTCTGGTCTATTTA 59.904 41.667 0.00 0.00 37.42 1.40
4819 5495 3.119495 GCAAAATGCCGTCTGGTCTATTT 60.119 43.478 0.00 0.00 37.42 1.40
4820 5496 2.423538 GCAAAATGCCGTCTGGTCTATT 59.576 45.455 0.00 0.00 37.42 1.73
4821 5497 2.017049 GCAAAATGCCGTCTGGTCTAT 58.983 47.619 0.00 0.00 37.42 1.98
4822 5498 1.448985 GCAAAATGCCGTCTGGTCTA 58.551 50.000 0.00 0.00 37.42 2.59
4823 5499 2.257353 GCAAAATGCCGTCTGGTCT 58.743 52.632 0.00 0.00 37.42 3.85
4824 5500 4.868195 GCAAAATGCCGTCTGGTC 57.132 55.556 0.00 0.00 37.42 4.02
4886 5562 7.402071 ACACCTCCAATAGTTTCAGGTCTTATA 59.598 37.037 0.00 0.00 35.13 0.98
4892 5568 3.394606 ACACACCTCCAATAGTTTCAGGT 59.605 43.478 0.00 0.00 38.02 4.00
4906 5582 8.204836 AGGTATATGAATAAACTGACACACCTC 58.795 37.037 0.00 0.00 0.00 3.85
4922 5598 7.759489 AACTGCACTTTTCAAGGTATATGAA 57.241 32.000 0.00 0.00 35.11 2.57
4925 5601 8.739972 CCTAAAACTGCACTTTTCAAGGTATAT 58.260 33.333 7.26 0.00 0.00 0.86
4939 5615 3.713288 GTTTTGGGACCTAAAACTGCAC 58.287 45.455 29.24 11.40 42.07 4.57
4949 5625 5.948842 ACAACTTACATAGTTTTGGGACCT 58.051 37.500 0.00 0.00 44.73 3.85
4970 5646 4.098044 CGAGCTTAGGACCTAAGATGAACA 59.902 45.833 35.68 5.39 41.81 3.18
4993 5669 0.523072 AACACTGGTCATGCGAATGC 59.477 50.000 0.00 0.00 43.20 3.56
4997 5673 1.675714 GGATCAACACTGGTCATGCGA 60.676 52.381 0.00 0.00 33.98 5.10
4998 5674 0.729116 GGATCAACACTGGTCATGCG 59.271 55.000 0.00 0.00 33.98 4.73
4999 5675 1.825090 TGGATCAACACTGGTCATGC 58.175 50.000 0.00 0.00 33.98 4.06
5003 5679 2.416547 CGTCAATGGATCAACACTGGTC 59.583 50.000 0.00 0.00 31.21 4.02
5004 5680 2.224523 ACGTCAATGGATCAACACTGGT 60.225 45.455 0.00 0.00 0.00 4.00
5005 5681 2.160219 CACGTCAATGGATCAACACTGG 59.840 50.000 0.00 0.00 0.00 4.00
5006 5682 2.807967 ACACGTCAATGGATCAACACTG 59.192 45.455 0.00 0.00 0.00 3.66
5007 5683 3.067106 GACACGTCAATGGATCAACACT 58.933 45.455 0.00 0.00 0.00 3.55
5008 5684 2.805671 TGACACGTCAATGGATCAACAC 59.194 45.455 0.00 0.00 36.53 3.32
5009 5685 2.805671 GTGACACGTCAATGGATCAACA 59.194 45.455 0.50 0.00 41.85 3.33
5010 5686 3.067106 AGTGACACGTCAATGGATCAAC 58.933 45.455 0.50 0.00 41.85 3.18
5011 5687 3.401033 AGTGACACGTCAATGGATCAA 57.599 42.857 0.50 0.00 41.85 2.57
5012 5688 3.066380 CAAGTGACACGTCAATGGATCA 58.934 45.455 0.50 0.00 41.85 2.92
5013 5689 2.416547 CCAAGTGACACGTCAATGGATC 59.583 50.000 20.71 2.28 44.88 3.36
5014 5690 2.038426 TCCAAGTGACACGTCAATGGAT 59.962 45.455 22.61 0.00 45.27 3.41
5015 5691 1.414550 TCCAAGTGACACGTCAATGGA 59.585 47.619 22.61 22.61 46.62 3.41
5016 5692 1.531149 GTCCAAGTGACACGTCAATGG 59.469 52.381 19.84 19.84 44.12 3.16
5024 5700 0.598065 GGCAATGGTCCAAGTGACAC 59.402 55.000 9.58 0.00 46.38 3.67
5029 5705 0.467290 AACGTGGCAATGGTCCAAGT 60.467 50.000 0.00 0.00 45.78 3.16
5045 5721 2.033602 GGGTCCCTTGGGTCAACG 59.966 66.667 0.00 0.00 0.00 4.10
5048 5724 1.698116 TTGTGGGTCCCTTGGGTCA 60.698 57.895 10.00 0.94 0.00 4.02
5124 5800 1.971505 TATTGCGGGGTGAGGCTGAG 61.972 60.000 0.00 0.00 0.00 3.35
5151 5827 1.003355 CACGAGTGGGGAGCATGTT 60.003 57.895 0.00 0.00 0.00 2.71
5153 5829 2.124983 CCACGAGTGGGGAGCATG 60.125 66.667 14.19 0.00 46.81 4.06
5162 5838 1.495584 CCCAACGACAACCACGAGTG 61.496 60.000 0.00 0.00 34.70 3.51
5163 5839 1.227438 CCCAACGACAACCACGAGT 60.227 57.895 0.00 0.00 34.70 4.18
5164 5840 1.959226 CCCCAACGACAACCACGAG 60.959 63.158 0.00 0.00 34.70 4.18
5177 5853 0.178767 CGAGAGTGATGCATCCCCAA 59.821 55.000 23.67 1.98 0.00 4.12
5199 5875 3.760684 ACCATGAATCTCAAGCAAAGGTC 59.239 43.478 0.00 0.00 0.00 3.85
5264 5949 2.026262 GGAAGGTACCAAGCTCATGGAA 60.026 50.000 15.94 0.00 43.54 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.