Multiple sequence alignment - TraesCS7A01G507700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G507700 chr7A 100.000 4067 0 0 1 4067 694423397 694419331 0.000000e+00 7511.0
1 TraesCS7A01G507700 chr7A 85.054 1298 162 18 1790 3069 694357321 694356038 0.000000e+00 1293.0
2 TraesCS7A01G507700 chr7A 87.057 649 81 2 1680 2325 669397103 669396455 0.000000e+00 730.0
3 TraesCS7A01G507700 chr7A 76.616 851 152 27 958 1768 694196411 694197254 3.760000e-115 425.0
4 TraesCS7A01G507700 chr7A 76.895 818 140 28 995 1770 694331908 694331098 6.290000e-113 418.0
5 TraesCS7A01G507700 chr7A 77.318 701 117 29 996 1673 669398103 669397422 3.840000e-100 375.0
6 TraesCS7A01G507700 chr7A 72.938 861 171 34 995 1800 694116499 694117352 4.060000e-60 243.0
7 TraesCS7A01G507700 chr7A 82.258 248 43 1 2838 3085 694372234 694371988 3.180000e-51 213.0
8 TraesCS7A01G507700 chr7A 75.472 424 66 17 958 1347 694135968 694136387 5.400000e-39 172.0
9 TraesCS7A01G507700 chr7D 89.244 3319 267 45 5 3255 602773170 602769874 0.000000e+00 4069.0
10 TraesCS7A01G507700 chr7D 84.920 1313 166 21 1790 3084 602722689 602721391 0.000000e+00 1299.0
11 TraesCS7A01G507700 chr7D 75.912 822 147 31 995 1770 602664455 602663639 1.380000e-99 374.0
12 TraesCS7A01G507700 chr7D 83.077 390 37 15 3347 3733 602768638 602768275 1.090000e-85 327.0
13 TraesCS7A01G507700 chr7D 77.620 353 56 10 39 370 42566149 42566499 4.150000e-45 193.0
14 TraesCS7A01G507700 chr7B 92.904 2311 150 6 830 3128 683419907 683417599 0.000000e+00 3347.0
15 TraesCS7A01G507700 chr7B 90.071 1259 124 1 1855 3112 683325164 683323906 0.000000e+00 1631.0
16 TraesCS7A01G507700 chr7B 86.225 1343 177 5 1626 2964 640353877 640355215 0.000000e+00 1448.0
17 TraesCS7A01G507700 chr7B 83.333 1344 187 20 1786 3104 683106625 683107956 0.000000e+00 1206.0
18 TraesCS7A01G507700 chr7B 95.685 394 17 0 1472 1865 683326261 683325868 5.730000e-178 634.0
19 TraesCS7A01G507700 chr7B 98.142 323 5 1 3745 4067 563660850 563661171 2.740000e-156 562.0
20 TraesCS7A01G507700 chr7B 80.845 663 96 22 995 1633 640347974 640348629 3.650000e-135 492.0
21 TraesCS7A01G507700 chr7B 84.870 423 33 18 415 809 683420384 683419965 8.190000e-107 398.0
22 TraesCS7A01G507700 chr7B 80.366 382 32 15 3347 3727 683316507 683316168 2.430000e-62 250.0
23 TraesCS7A01G507700 chr7B 88.945 199 14 4 3529 3727 683416903 683416713 5.250000e-59 239.0
24 TraesCS7A01G507700 chr7B 90.244 41 4 0 95 135 683401273 683401313 2.000000e-03 54.7
25 TraesCS7A01G507700 chrUn 85.519 2120 272 21 994 3085 92685769 92683657 0.000000e+00 2182.0
26 TraesCS7A01G507700 chrUn 85.519 2120 272 21 994 3085 291005271 291003159 0.000000e+00 2182.0
27 TraesCS7A01G507700 chrUn 97.749 311 7 0 3757 4067 300571383 300571073 1.660000e-148 536.0
28 TraesCS7A01G507700 chrUn 79.600 250 35 8 73 309 399496514 399496760 9.040000e-37 165.0
29 TraesCS7A01G507700 chrUn 79.583 240 35 7 81 309 155018621 155018385 4.210000e-35 159.0
30 TraesCS7A01G507700 chr4B 84.147 1167 163 14 1914 3072 28537603 28538755 0.000000e+00 1110.0
31 TraesCS7A01G507700 chr4B 77.167 819 138 26 994 1768 28536575 28537388 8.080000e-117 431.0
32 TraesCS7A01G507700 chr3B 98.714 311 4 0 3757 4067 561000086 560999776 1.650000e-153 553.0
33 TraesCS7A01G507700 chr3B 97.214 323 8 1 3745 4067 420652584 420652263 2.760000e-151 545.0
34 TraesCS7A01G507700 chr3B 79.401 267 37 9 73 324 792275881 792276144 5.400000e-39 172.0
35 TraesCS7A01G507700 chr3B 79.600 250 35 8 73 309 792362282 792362528 9.040000e-37 165.0
36 TraesCS7A01G507700 chr3B 79.583 240 35 7 81 309 793468409 793468173 4.210000e-35 159.0
37 TraesCS7A01G507700 chr3B 88.043 92 3 5 3268 3356 685318578 685318664 7.190000e-18 102.0
38 TraesCS7A01G507700 chr2B 98.714 311 4 0 3757 4067 5298516 5298206 1.650000e-153 553.0
39 TraesCS7A01G507700 chr2B 76.119 268 44 12 56 309 776036122 776035861 5.520000e-24 122.0
40 TraesCS7A01G507700 chr6B 97.523 323 7 1 3745 4067 125610303 125609982 5.940000e-153 551.0
41 TraesCS7A01G507700 chr6B 96.285 323 11 1 3745 4067 623992848 623992527 2.780000e-146 529.0
42 TraesCS7A01G507700 chr2A 98.392 311 5 0 3757 4067 755764348 755764038 7.690000e-152 547.0
43 TraesCS7A01G507700 chr3A 95.509 334 11 3 3734 4067 728358656 728358985 7.740000e-147 531.0
44 TraesCS7A01G507700 chr1D 77.746 355 49 16 39 370 115162053 115162400 1.490000e-44 191.0
45 TraesCS7A01G507700 chr4D 76.508 315 44 12 8 311 84600009 84600304 1.180000e-30 145.0
46 TraesCS7A01G507700 chr5D 81.176 170 27 5 142 309 491789613 491789447 9.170000e-27 132.0
47 TraesCS7A01G507700 chr4A 78.082 219 35 13 95 309 55553729 55553520 4.270000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G507700 chr7A 694419331 694423397 4066 True 7511.0 7511 100.000000 1 4067 1 chr7A.!!$R4 4066
1 TraesCS7A01G507700 chr7A 694356038 694357321 1283 True 1293.0 1293 85.054000 1790 3069 1 chr7A.!!$R2 1279
2 TraesCS7A01G507700 chr7A 669396455 669398103 1648 True 552.5 730 82.187500 996 2325 2 chr7A.!!$R5 1329
3 TraesCS7A01G507700 chr7A 694196411 694197254 843 False 425.0 425 76.616000 958 1768 1 chr7A.!!$F3 810
4 TraesCS7A01G507700 chr7A 694331098 694331908 810 True 418.0 418 76.895000 995 1770 1 chr7A.!!$R1 775
5 TraesCS7A01G507700 chr7A 694116499 694117352 853 False 243.0 243 72.938000 995 1800 1 chr7A.!!$F1 805
6 TraesCS7A01G507700 chr7D 602768275 602773170 4895 True 2198.0 4069 86.160500 5 3733 2 chr7D.!!$R3 3728
7 TraesCS7A01G507700 chr7D 602721391 602722689 1298 True 1299.0 1299 84.920000 1790 3084 1 chr7D.!!$R2 1294
8 TraesCS7A01G507700 chr7D 602663639 602664455 816 True 374.0 374 75.912000 995 1770 1 chr7D.!!$R1 775
9 TraesCS7A01G507700 chr7B 640353877 640355215 1338 False 1448.0 1448 86.225000 1626 2964 1 chr7B.!!$F3 1338
10 TraesCS7A01G507700 chr7B 683416713 683420384 3671 True 1328.0 3347 88.906333 415 3727 3 chr7B.!!$R3 3312
11 TraesCS7A01G507700 chr7B 683106625 683107956 1331 False 1206.0 1206 83.333000 1786 3104 1 chr7B.!!$F4 1318
12 TraesCS7A01G507700 chr7B 683323906 683326261 2355 True 1132.5 1631 92.878000 1472 3112 2 chr7B.!!$R2 1640
13 TraesCS7A01G507700 chr7B 640347974 640348629 655 False 492.0 492 80.845000 995 1633 1 chr7B.!!$F2 638
14 TraesCS7A01G507700 chrUn 92683657 92685769 2112 True 2182.0 2182 85.519000 994 3085 1 chrUn.!!$R1 2091
15 TraesCS7A01G507700 chrUn 291003159 291005271 2112 True 2182.0 2182 85.519000 994 3085 1 chrUn.!!$R3 2091
16 TraesCS7A01G507700 chr4B 28536575 28538755 2180 False 770.5 1110 80.657000 994 3072 2 chr4B.!!$F1 2078

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
987 1073 0.111253 CCTCCTTCCCAAGCACTGTT 59.889 55.0 0.0 0.0 0.00 3.16 F
2665 3960 0.673644 CGCTGGGAAATCCTTCACGT 60.674 55.0 0.0 0.0 37.84 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2814 4109 0.616395 TGGTCTGGGCAATAGACGGA 60.616 55.0 8.89 0.0 44.24 4.69 R
4015 6828 0.033503 TCGCTGGAGATGGTGAGGTA 60.034 55.0 0.00 0.0 0.00 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 6.531503 TTGTGGAAACCATGTTTGAAAGTA 57.468 33.333 0.00 0.00 35.28 2.24
68 69 5.897050 TGTGGAAACCATGTTTGAAAGTAC 58.103 37.500 0.00 0.00 35.28 2.73
70 71 4.036971 TGGAAACCATGTTTGAAAGTACCG 59.963 41.667 0.00 0.00 0.00 4.02
74 75 5.838531 ACCATGTTTGAAAGTACCGAAAA 57.161 34.783 0.00 0.00 0.00 2.29
77 78 7.269316 ACCATGTTTGAAAGTACCGAAAAATT 58.731 30.769 0.00 0.00 0.00 1.82
122 124 7.976135 AGAGGATAATGTTCTATTGTCATGC 57.024 36.000 0.00 0.00 0.00 4.06
123 125 7.512130 AGAGGATAATGTTCTATTGTCATGCA 58.488 34.615 0.00 0.00 0.00 3.96
156 168 2.522836 ACAGGATGCGAGCTATGAAG 57.477 50.000 0.00 0.00 42.53 3.02
158 170 2.432146 ACAGGATGCGAGCTATGAAGAA 59.568 45.455 0.00 0.00 42.53 2.52
165 177 4.314961 TGCGAGCTATGAAGAAGACAAAA 58.685 39.130 0.00 0.00 0.00 2.44
211 223 8.424274 TCAATGTACTACACTATTCAATGCTG 57.576 34.615 0.00 0.00 0.00 4.41
232 244 7.056006 TGCTGATTTTATCTCTTTCATAGCCA 58.944 34.615 0.00 0.00 0.00 4.75
251 263 3.832276 CCAACATCCCGTAACATGTTTG 58.168 45.455 17.78 10.17 40.52 2.93
257 269 5.998981 ACATCCCGTAACATGTTTGAACTTA 59.001 36.000 17.78 0.00 28.27 2.24
258 270 6.148811 ACATCCCGTAACATGTTTGAACTTAG 59.851 38.462 17.78 4.23 28.27 2.18
270 282 8.980610 CATGTTTGAACTTAGAATTTTGCATGA 58.019 29.630 0.00 0.00 31.99 3.07
288 300 5.105797 TGCATGACAATAAAACATCACCCTC 60.106 40.000 0.00 0.00 0.00 4.30
297 309 7.881775 ATAAAACATCACCCTCTTAACATCC 57.118 36.000 0.00 0.00 0.00 3.51
298 310 3.933861 ACATCACCCTCTTAACATCCC 57.066 47.619 0.00 0.00 0.00 3.85
334 354 8.806634 TGAAACTTCAAAACATCATTTTTCTCG 58.193 29.630 0.00 0.00 33.55 4.04
342 362 7.841915 AAACATCATTTTTCTCGTGGTTTTT 57.158 28.000 0.00 0.00 0.00 1.94
346 366 7.537306 ACATCATTTTTCTCGTGGTTTTTATCG 59.463 33.333 0.00 0.00 0.00 2.92
347 367 7.192148 TCATTTTTCTCGTGGTTTTTATCGA 57.808 32.000 0.00 0.00 0.00 3.59
348 368 7.812648 TCATTTTTCTCGTGGTTTTTATCGAT 58.187 30.769 2.16 2.16 0.00 3.59
355 375 7.812648 TCTCGTGGTTTTTATCGATTTTCATT 58.187 30.769 1.71 0.00 0.00 2.57
370 390 6.128580 CGATTTTCATTGAATGTTGGTTTCCC 60.129 38.462 4.93 0.00 0.00 3.97
373 393 5.975693 TCATTGAATGTTGGTTTCCCTAC 57.024 39.130 4.93 0.00 37.05 3.18
390 410 7.712204 TTCCCTACAATATTTTTCCTGGTTC 57.288 36.000 0.00 0.00 0.00 3.62
392 412 5.449999 CCCTACAATATTTTTCCTGGTTCGC 60.450 44.000 0.00 0.00 0.00 4.70
394 414 3.829601 ACAATATTTTTCCTGGTTCGCCA 59.170 39.130 0.00 0.00 46.87 5.69
443 463 1.235948 AACTCTCGACTCGGCGAACT 61.236 55.000 12.13 0.00 40.13 3.01
485 505 4.699522 AGGCGGCAAGAACGACCC 62.700 66.667 13.08 0.00 41.14 4.46
514 551 4.735132 GCAGTACGGCGCTCCACA 62.735 66.667 6.90 0.00 0.00 4.17
604 641 3.682292 CTCCCTGGCCACGCTAACC 62.682 68.421 0.00 0.00 0.00 2.85
628 665 2.709125 CTTGACTCCACAACGGCCGA 62.709 60.000 35.90 7.04 33.14 5.54
721 768 2.509336 GGCGACTCCGTCATGTGG 60.509 66.667 0.00 0.00 40.69 4.17
810 871 0.889186 ACAACGACACCATTGGCTCC 60.889 55.000 1.54 0.00 0.00 4.70
838 899 1.076533 CGTCGTGGAGACCAATTCCG 61.077 60.000 0.00 0.00 46.92 4.30
898 984 1.153046 CACACCCCACTTTGGTCGT 60.153 57.895 0.00 0.00 35.17 4.34
899 985 1.147600 ACACCCCACTTTGGTCGTC 59.852 57.895 0.00 0.00 35.17 4.20
917 1003 3.259930 CGGTCGCCGGTTTGAAAT 58.740 55.556 1.90 0.00 44.15 2.17
920 1006 0.386731 GGTCGCCGGTTTGAAATGTG 60.387 55.000 1.90 0.00 0.00 3.21
928 1014 1.068541 GGTTTGAAATGTGGACGAGCC 60.069 52.381 0.00 0.00 37.10 4.70
939 1025 3.342377 TGGACGAGCCATACAATTTCA 57.658 42.857 0.00 0.00 43.33 2.69
950 1036 5.682212 GCCATACAATTTCATCCCCACTTTC 60.682 44.000 0.00 0.00 0.00 2.62
951 1037 5.421693 CCATACAATTTCATCCCCACTTTCA 59.578 40.000 0.00 0.00 0.00 2.69
987 1073 0.111253 CCTCCTTCCCAAGCACTGTT 59.889 55.000 0.00 0.00 0.00 3.16
988 1074 1.479389 CCTCCTTCCCAAGCACTGTTT 60.479 52.381 0.00 0.00 0.00 2.83
1407 1564 2.677228 CTCCCGGCCTTCACCAAT 59.323 61.111 0.00 0.00 0.00 3.16
1416 1573 1.378514 CTTCACCAATGGGACGGGG 60.379 63.158 3.55 0.00 38.05 5.73
1417 1574 1.847798 CTTCACCAATGGGACGGGGA 61.848 60.000 3.55 0.00 38.05 4.81
1574 1743 2.354821 TCACGTCGTCCTATGTCATGAG 59.645 50.000 0.00 0.00 0.00 2.90
1673 2154 1.136774 CGACCGTCGATCTGAGCAA 59.863 57.895 16.03 0.00 43.74 3.91
2301 3593 2.093288 CAGGCATCTCTACAGCAAGGAA 60.093 50.000 0.00 0.00 0.00 3.36
2421 3716 2.679837 CGACATCAAGCCTAGCAACATT 59.320 45.455 0.00 0.00 0.00 2.71
2665 3960 0.673644 CGCTGGGAAATCCTTCACGT 60.674 55.000 0.00 0.00 37.84 4.49
2688 3983 1.918293 CAGGTGGGTGTGGAGCCTA 60.918 63.158 0.00 0.00 40.76 3.93
2763 4058 1.078426 CAACGAGGGGTGGATGGTC 60.078 63.158 0.00 0.00 0.00 4.02
2766 4061 4.176752 GAGGGGTGGATGGTCCGC 62.177 72.222 0.94 0.94 46.03 5.54
2790 4085 2.680352 ATCGTCGGGCTCTGGTGT 60.680 61.111 0.00 0.00 0.00 4.16
2793 4088 4.314440 GTCGGGCTCTGGTGTGCA 62.314 66.667 0.00 0.00 34.68 4.57
2821 4116 3.200593 GGAGCGAGCGTCCGTCTA 61.201 66.667 0.00 0.00 0.00 2.59
2830 4125 1.813859 CGTCCGTCTATTGCCCAGA 59.186 57.895 0.00 0.00 0.00 3.86
2852 4147 2.029666 GCACGTCCTGCAGTCTGT 59.970 61.111 13.81 4.51 46.29 3.41
3020 4318 2.949644 CCACCAAACTTTCTTCCGACTT 59.050 45.455 0.00 0.00 0.00 3.01
3041 4339 1.080772 CCTCGACTGCGTTGCTACA 60.081 57.895 0.00 0.00 38.98 2.74
3058 4357 4.708177 GCTACAGCAATCCAAGGATCTAA 58.292 43.478 1.37 0.00 41.59 2.10
3128 4431 1.270274 TCCAACATGCATTGACAGCAC 59.730 47.619 0.00 0.00 45.95 4.40
3129 4432 1.271379 CCAACATGCATTGACAGCACT 59.729 47.619 0.00 0.00 45.95 4.40
3132 4435 3.837213 ACATGCATTGACAGCACTAAC 57.163 42.857 0.00 0.00 45.95 2.34
3133 4436 3.148412 ACATGCATTGACAGCACTAACA 58.852 40.909 0.00 0.00 45.95 2.41
3134 4437 3.760151 ACATGCATTGACAGCACTAACAT 59.240 39.130 0.00 0.00 45.95 2.71
3135 4438 3.835378 TGCATTGACAGCACTAACATG 57.165 42.857 0.00 0.00 37.02 3.21
3140 4463 6.072008 TGCATTGACAGCACTAACATGTAAAT 60.072 34.615 0.00 0.00 37.02 1.40
3151 4740 6.036517 CACTAACATGTAAATCTGAGAGCACC 59.963 42.308 0.00 0.00 0.00 5.01
3157 4746 1.903877 AATCTGAGAGCACCCCACCG 61.904 60.000 0.00 0.00 0.00 4.94
3169 4758 0.834612 CCCCACCGCCTTATCTAACA 59.165 55.000 0.00 0.00 0.00 2.41
3183 4772 7.761249 GCCTTATCTAACAATTCATTTTGTGCT 59.239 33.333 0.00 0.00 39.68 4.40
3188 4777 3.715495 ACAATTCATTTTGTGCTTCGCA 58.285 36.364 0.00 0.00 38.37 5.10
3192 4781 2.945278 TCATTTTGTGCTTCGCAATCC 58.055 42.857 0.00 0.00 41.47 3.01
3247 4837 7.718272 CAAATCACAGAACATTTGGACAAAT 57.282 32.000 4.52 4.52 41.33 2.32
3255 4845 2.547634 ACATTTGGACAAATTTTGCGGC 59.452 40.909 9.04 0.00 38.84 6.53
3256 4846 2.315925 TTTGGACAAATTTTGCGGCA 57.684 40.000 9.04 0.00 0.00 5.69
3257 4847 2.315925 TTGGACAAATTTTGCGGCAA 57.684 40.000 12.11 12.11 0.00 4.52
3260 4850 2.209273 GGACAAATTTTGCGGCAAAGT 58.791 42.857 25.19 20.93 34.72 2.66
3262 4852 3.428534 GGACAAATTTTGCGGCAAAGTAG 59.571 43.478 25.19 20.09 34.72 2.57
3263 4853 4.048504 GACAAATTTTGCGGCAAAGTAGT 58.951 39.130 25.19 22.58 34.72 2.73
3264 4854 3.801594 ACAAATTTTGCGGCAAAGTAGTG 59.198 39.130 25.19 23.32 34.72 2.74
3265 4855 2.723124 ATTTTGCGGCAAAGTAGTGG 57.277 45.000 25.19 0.00 34.72 4.00
3266 4856 0.031449 TTTTGCGGCAAAGTAGTGGC 59.969 50.000 25.19 0.00 40.55 5.01
3267 4857 1.801309 TTTGCGGCAAAGTAGTGGCC 61.801 55.000 23.23 0.00 44.27 5.36
3268 4858 2.359975 GCGGCAAAGTAGTGGCCT 60.360 61.111 3.32 0.00 45.53 5.19
3269 4859 1.971695 GCGGCAAAGTAGTGGCCTT 60.972 57.895 3.32 0.00 45.53 4.35
3270 4860 1.923227 GCGGCAAAGTAGTGGCCTTC 61.923 60.000 3.32 0.00 45.53 3.46
3271 4861 1.305930 CGGCAAAGTAGTGGCCTTCC 61.306 60.000 3.32 0.00 45.53 3.46
3272 4862 0.038310 GGCAAAGTAGTGGCCTTCCT 59.962 55.000 3.32 0.00 44.32 3.36
3273 4863 1.454201 GCAAAGTAGTGGCCTTCCTC 58.546 55.000 3.32 0.00 0.00 3.71
3274 4864 1.950954 GCAAAGTAGTGGCCTTCCTCC 60.951 57.143 3.32 0.00 0.00 4.30
3275 4865 0.992695 AAAGTAGTGGCCTTCCTCCC 59.007 55.000 3.32 0.00 0.00 4.30
3276 4866 0.914902 AAGTAGTGGCCTTCCTCCCC 60.915 60.000 3.32 0.00 0.00 4.81
3280 4870 2.451493 TGGCCTTCCTCCCCACAA 60.451 61.111 3.32 0.00 0.00 3.33
3281 4871 1.856873 TGGCCTTCCTCCCCACAAT 60.857 57.895 3.32 0.00 0.00 2.71
3282 4872 1.388133 GGCCTTCCTCCCCACAATT 59.612 57.895 0.00 0.00 0.00 2.32
3283 4873 0.972471 GGCCTTCCTCCCCACAATTG 60.972 60.000 3.24 3.24 0.00 2.32
3286 4876 1.453155 CTTCCTCCCCACAATTGACG 58.547 55.000 13.59 2.43 0.00 4.35
3287 4877 0.037590 TTCCTCCCCACAATTGACGG 59.962 55.000 13.59 11.77 0.00 4.79
3289 4879 1.002134 CTCCCCACAATTGACGGCT 60.002 57.895 13.59 0.00 0.00 5.52
3290 4880 1.002624 TCCCCACAATTGACGGCTC 60.003 57.895 13.59 0.00 0.00 4.70
3292 4882 1.303236 CCCACAATTGACGGCTCCA 60.303 57.895 13.59 0.00 0.00 3.86
3294 4884 0.452987 CCACAATTGACGGCTCCATG 59.547 55.000 13.59 0.00 0.00 3.66
3295 4885 1.452110 CACAATTGACGGCTCCATGA 58.548 50.000 13.59 0.00 0.00 3.07
3296 4886 1.131126 CACAATTGACGGCTCCATGAC 59.869 52.381 13.59 0.00 0.00 3.06
3314 4904 2.870372 GCAGGGCGTTGTAAGCAG 59.130 61.111 0.00 0.00 36.08 4.24
3315 4905 1.966451 GCAGGGCGTTGTAAGCAGT 60.966 57.895 0.00 0.00 36.08 4.40
3316 4906 1.868997 CAGGGCGTTGTAAGCAGTG 59.131 57.895 0.00 0.00 36.08 3.66
3317 4907 0.884704 CAGGGCGTTGTAAGCAGTGT 60.885 55.000 0.00 0.00 36.08 3.55
3318 4908 0.884704 AGGGCGTTGTAAGCAGTGTG 60.885 55.000 0.00 0.00 36.08 3.82
3320 4910 0.234884 GGCGTTGTAAGCAGTGTGTC 59.765 55.000 0.00 0.00 36.08 3.67
3321 4911 1.217882 GCGTTGTAAGCAGTGTGTCT 58.782 50.000 0.00 0.00 34.19 3.41
3323 4913 1.526887 CGTTGTAAGCAGTGTGTCTGG 59.473 52.381 0.00 0.00 43.78 3.86
3324 4914 1.264288 GTTGTAAGCAGTGTGTCTGGC 59.736 52.381 0.00 0.00 43.78 4.85
3326 4916 1.134250 TGTAAGCAGTGTGTCTGGCAA 60.134 47.619 0.00 0.00 43.78 4.52
3327 4917 2.154462 GTAAGCAGTGTGTCTGGCAAT 58.846 47.619 0.00 0.00 43.78 3.56
3328 4918 0.956633 AAGCAGTGTGTCTGGCAATG 59.043 50.000 0.00 0.00 43.78 2.82
3329 4919 0.892358 AGCAGTGTGTCTGGCAATGG 60.892 55.000 0.00 0.00 43.78 3.16
3330 4920 1.582968 CAGTGTGTCTGGCAATGGC 59.417 57.895 0.00 0.00 40.23 4.40
3331 4921 1.151221 AGTGTGTCTGGCAATGGCA 59.849 52.632 9.67 9.67 43.71 4.92
3333 4923 1.004628 AGTGTGTCTGGCAATGGCATA 59.995 47.619 10.64 0.00 43.71 3.14
3334 4924 1.133025 GTGTGTCTGGCAATGGCATAC 59.867 52.381 16.41 16.41 43.71 2.39
3335 4925 1.004628 TGTGTCTGGCAATGGCATACT 59.995 47.619 21.88 0.00 43.71 2.12
3336 4926 1.672881 GTGTCTGGCAATGGCATACTC 59.327 52.381 21.88 16.26 43.71 2.59
3337 4927 1.281577 TGTCTGGCAATGGCATACTCA 59.718 47.619 21.88 11.43 43.71 3.41
3338 4928 1.945394 GTCTGGCAATGGCATACTCAG 59.055 52.381 16.08 8.80 43.71 3.35
3339 4929 0.666913 CTGGCAATGGCATACTCAGC 59.333 55.000 10.64 0.27 43.71 4.26
3340 4930 0.256752 TGGCAATGGCATACTCAGCT 59.743 50.000 5.05 0.00 43.71 4.24
3341 4931 1.341285 TGGCAATGGCATACTCAGCTT 60.341 47.619 5.05 0.00 43.71 3.74
3343 4933 2.291741 GGCAATGGCATACTCAGCTTAC 59.708 50.000 0.00 0.00 43.71 2.34
3344 4934 3.209410 GCAATGGCATACTCAGCTTACT 58.791 45.455 0.00 0.00 40.72 2.24
3345 4935 3.629398 GCAATGGCATACTCAGCTTACTT 59.371 43.478 0.00 0.00 40.72 2.24
3346 4936 4.816385 GCAATGGCATACTCAGCTTACTTA 59.184 41.667 0.00 0.00 40.72 2.24
3347 4937 5.471456 GCAATGGCATACTCAGCTTACTTAT 59.529 40.000 0.00 0.00 40.72 1.73
3348 4938 6.016777 GCAATGGCATACTCAGCTTACTTATT 60.017 38.462 0.00 0.00 40.72 1.40
3349 4939 7.469181 GCAATGGCATACTCAGCTTACTTATTT 60.469 37.037 0.00 0.00 40.72 1.40
3351 4941 5.753438 TGGCATACTCAGCTTACTTATTTCG 59.247 40.000 0.00 0.00 0.00 3.46
3352 4942 5.753921 GGCATACTCAGCTTACTTATTTCGT 59.246 40.000 0.00 0.00 0.00 3.85
3354 4944 7.201617 GGCATACTCAGCTTACTTATTTCGTTT 60.202 37.037 0.00 0.00 0.00 3.60
3355 4945 8.175716 GCATACTCAGCTTACTTATTTCGTTTT 58.824 33.333 0.00 0.00 0.00 2.43
3356 4946 9.690434 CATACTCAGCTTACTTATTTCGTTTTC 57.310 33.333 0.00 0.00 0.00 2.29
3357 4947 7.724305 ACTCAGCTTACTTATTTCGTTTTCA 57.276 32.000 0.00 0.00 0.00 2.69
3358 4948 7.797819 ACTCAGCTTACTTATTTCGTTTTCAG 58.202 34.615 0.00 0.00 0.00 3.02
3373 6106 9.813080 TTTCGTTTTCAGTTTTTAAACCAATTG 57.187 25.926 0.00 0.00 39.71 2.32
3407 6140 6.037500 CCGAATACCCGATATATAACACTCGA 59.962 42.308 5.28 0.00 33.07 4.04
3424 6157 6.978338 ACACTCGACTTATACTTTTGACTGA 58.022 36.000 0.00 0.00 0.00 3.41
3427 6160 8.587950 CACTCGACTTATACTTTTGACTGATTC 58.412 37.037 0.00 0.00 0.00 2.52
3439 6172 9.794685 ACTTTTGACTGATTCTTTTCTTTTCTC 57.205 29.630 0.00 0.00 0.00 2.87
3502 6315 8.487028 TGTAATATCTTTCTTTCCCCTCTCTTC 58.513 37.037 0.00 0.00 0.00 2.87
3503 6316 7.763564 AATATCTTTCTTTCCCCTCTCTTCT 57.236 36.000 0.00 0.00 0.00 2.85
3504 6317 5.692115 ATCTTTCTTTCCCCTCTCTTCTC 57.308 43.478 0.00 0.00 0.00 2.87
3505 6318 4.493618 TCTTTCTTTCCCCTCTCTTCTCA 58.506 43.478 0.00 0.00 0.00 3.27
3506 6319 4.284746 TCTTTCTTTCCCCTCTCTTCTCAC 59.715 45.833 0.00 0.00 0.00 3.51
3507 6320 3.551635 TCTTTCCCCTCTCTTCTCACT 57.448 47.619 0.00 0.00 0.00 3.41
3509 6322 3.169099 CTTTCCCCTCTCTTCTCACTCA 58.831 50.000 0.00 0.00 0.00 3.41
3510 6323 2.223803 TCCCCTCTCTTCTCACTCAC 57.776 55.000 0.00 0.00 0.00 3.51
3512 6325 2.099405 CCCCTCTCTTCTCACTCACTC 58.901 57.143 0.00 0.00 0.00 3.51
3515 6328 2.291540 CCTCTCTTCTCACTCACTCCCT 60.292 54.545 0.00 0.00 0.00 4.20
3516 6329 3.016736 CTCTCTTCTCACTCACTCCCTC 58.983 54.545 0.00 0.00 0.00 4.30
3517 6330 2.099405 CTCTTCTCACTCACTCCCTCC 58.901 57.143 0.00 0.00 0.00 4.30
3518 6331 1.190643 CTTCTCACTCACTCCCTCCC 58.809 60.000 0.00 0.00 0.00 4.30
3519 6332 0.612174 TTCTCACTCACTCCCTCCCG 60.612 60.000 0.00 0.00 0.00 5.14
3520 6333 2.680352 TCACTCACTCCCTCCCGC 60.680 66.667 0.00 0.00 0.00 6.13
3521 6334 3.775654 CACTCACTCCCTCCCGCC 61.776 72.222 0.00 0.00 0.00 6.13
3522 6335 4.316823 ACTCACTCCCTCCCGCCA 62.317 66.667 0.00 0.00 0.00 5.69
3523 6336 3.003173 CTCACTCCCTCCCGCCAA 61.003 66.667 0.00 0.00 0.00 4.52
3524 6337 2.528127 TCACTCCCTCCCGCCAAA 60.528 61.111 0.00 0.00 0.00 3.28
3525 6338 2.124507 CTCACTCCCTCCCGCCAAAA 62.125 60.000 0.00 0.00 0.00 2.44
3526 6339 1.000896 CACTCCCTCCCGCCAAAAT 60.001 57.895 0.00 0.00 0.00 1.82
3527 6340 0.611896 CACTCCCTCCCGCCAAAATT 60.612 55.000 0.00 0.00 0.00 1.82
3531 6344 1.510844 CCTCCCGCCAAAATTTCCG 59.489 57.895 0.00 0.00 0.00 4.30
3549 6362 0.036875 CGGCCATTTCTATCCCCTCC 59.963 60.000 2.24 0.00 0.00 4.30
3557 6370 2.908263 TCTATCCCCTCCATTTCCCA 57.092 50.000 0.00 0.00 0.00 4.37
3558 6371 2.418669 TCTATCCCCTCCATTTCCCAC 58.581 52.381 0.00 0.00 0.00 4.61
3562 6375 1.615262 CCCTCCATTTCCCACCCTC 59.385 63.158 0.00 0.00 0.00 4.30
3571 6384 2.649742 TTCCCACCCTCTCTCTTCAT 57.350 50.000 0.00 0.00 0.00 2.57
3594 6407 2.802247 GCCACTTTGCCACTTCAAAATC 59.198 45.455 0.00 0.00 35.75 2.17
3595 6408 3.052036 CCACTTTGCCACTTCAAAATCG 58.948 45.455 0.00 0.00 35.75 3.34
3596 6409 3.243367 CCACTTTGCCACTTCAAAATCGA 60.243 43.478 0.00 0.00 35.75 3.59
3597 6410 4.358851 CACTTTGCCACTTCAAAATCGAA 58.641 39.130 0.00 0.00 35.75 3.71
3598 6411 4.984161 CACTTTGCCACTTCAAAATCGAAT 59.016 37.500 0.00 0.00 35.75 3.34
3625 6438 8.038944 TGTGTATTCTATTTCTACCCTTCACAC 58.961 37.037 0.00 0.00 0.00 3.82
3638 6451 1.281867 CTTCACACCATCCTAGGGCAA 59.718 52.381 9.46 0.00 0.00 4.52
3669 6482 5.223449 ACCTCTCCAAACTTCACGAAATA 57.777 39.130 0.00 0.00 0.00 1.40
3731 6544 4.424266 GCAGAAAGCGTTCGAAGC 57.576 55.556 6.74 4.71 38.90 3.86
3733 6546 0.179238 GCAGAAAGCGTTCGAAGCTC 60.179 55.000 18.24 10.13 45.31 4.09
3734 6547 0.440371 CAGAAAGCGTTCGAAGCTCC 59.560 55.000 18.24 14.08 45.31 4.70
3735 6548 0.318762 AGAAAGCGTTCGAAGCTCCT 59.681 50.000 18.24 15.51 45.31 3.69
3736 6549 0.716666 GAAAGCGTTCGAAGCTCCTC 59.283 55.000 18.24 14.67 45.31 3.71
3737 6550 0.670854 AAAGCGTTCGAAGCTCCTCC 60.671 55.000 18.24 0.00 45.31 4.30
3738 6551 1.536943 AAGCGTTCGAAGCTCCTCCT 61.537 55.000 18.24 4.46 45.31 3.69
3739 6552 1.517475 GCGTTCGAAGCTCCTCCTC 60.517 63.158 0.00 0.00 0.00 3.71
3740 6553 1.139947 CGTTCGAAGCTCCTCCTCC 59.860 63.158 0.00 0.00 0.00 4.30
3741 6554 1.316706 CGTTCGAAGCTCCTCCTCCT 61.317 60.000 0.00 0.00 0.00 3.69
3742 6555 0.458260 GTTCGAAGCTCCTCCTCCTC 59.542 60.000 0.00 0.00 0.00 3.71
3743 6556 0.333312 TTCGAAGCTCCTCCTCCTCT 59.667 55.000 0.00 0.00 0.00 3.69
3744 6557 1.214217 TCGAAGCTCCTCCTCCTCTA 58.786 55.000 0.00 0.00 0.00 2.43
3745 6558 1.134037 TCGAAGCTCCTCCTCCTCTAC 60.134 57.143 0.00 0.00 0.00 2.59
3746 6559 1.699730 GAAGCTCCTCCTCCTCTACC 58.300 60.000 0.00 0.00 0.00 3.18
3747 6560 0.106419 AAGCTCCTCCTCCTCTACCG 60.106 60.000 0.00 0.00 0.00 4.02
3748 6561 1.227946 GCTCCTCCTCCTCTACCGT 59.772 63.158 0.00 0.00 0.00 4.83
3749 6562 0.820482 GCTCCTCCTCCTCTACCGTC 60.820 65.000 0.00 0.00 0.00 4.79
3750 6563 0.841289 CTCCTCCTCCTCTACCGTCT 59.159 60.000 0.00 0.00 0.00 4.18
3751 6564 0.838608 TCCTCCTCCTCTACCGTCTC 59.161 60.000 0.00 0.00 0.00 3.36
3752 6565 0.179012 CCTCCTCCTCTACCGTCTCC 60.179 65.000 0.00 0.00 0.00 3.71
3753 6566 0.547075 CTCCTCCTCTACCGTCTCCA 59.453 60.000 0.00 0.00 0.00 3.86
3754 6567 0.997363 TCCTCCTCTACCGTCTCCAA 59.003 55.000 0.00 0.00 0.00 3.53
3755 6568 1.104630 CCTCCTCTACCGTCTCCAAC 58.895 60.000 0.00 0.00 0.00 3.77
3756 6569 1.104630 CTCCTCTACCGTCTCCAACC 58.895 60.000 0.00 0.00 0.00 3.77
3757 6570 0.406750 TCCTCTACCGTCTCCAACCA 59.593 55.000 0.00 0.00 0.00 3.67
3758 6571 1.006758 TCCTCTACCGTCTCCAACCAT 59.993 52.381 0.00 0.00 0.00 3.55
3759 6572 1.137086 CCTCTACCGTCTCCAACCATG 59.863 57.143 0.00 0.00 0.00 3.66
3760 6573 2.100197 CTCTACCGTCTCCAACCATGA 58.900 52.381 0.00 0.00 0.00 3.07
3761 6574 2.099921 CTCTACCGTCTCCAACCATGAG 59.900 54.545 0.00 0.00 0.00 2.90
3762 6575 0.535335 TACCGTCTCCAACCATGAGC 59.465 55.000 0.00 0.00 0.00 4.26
3763 6576 1.194781 ACCGTCTCCAACCATGAGCT 61.195 55.000 0.00 0.00 0.00 4.09
3764 6577 0.460987 CCGTCTCCAACCATGAGCTC 60.461 60.000 6.82 6.82 0.00 4.09
3765 6578 0.460987 CGTCTCCAACCATGAGCTCC 60.461 60.000 12.15 0.00 0.00 4.70
3766 6579 0.908198 GTCTCCAACCATGAGCTCCT 59.092 55.000 12.15 0.00 0.00 3.69
3767 6580 1.134551 GTCTCCAACCATGAGCTCCTC 60.135 57.143 12.15 0.00 0.00 3.71
3768 6581 0.179936 CTCCAACCATGAGCTCCTCC 59.820 60.000 12.15 0.00 0.00 4.30
3769 6582 0.252881 TCCAACCATGAGCTCCTCCT 60.253 55.000 12.15 0.00 0.00 3.69
3770 6583 0.179936 CCAACCATGAGCTCCTCCTC 59.820 60.000 12.15 0.00 0.00 3.71
3771 6584 0.179936 CAACCATGAGCTCCTCCTCC 59.820 60.000 12.15 0.00 0.00 4.30
3772 6585 0.043940 AACCATGAGCTCCTCCTCCT 59.956 55.000 12.15 0.00 0.00 3.69
3773 6586 0.398381 ACCATGAGCTCCTCCTCCTC 60.398 60.000 12.15 0.00 0.00 3.71
3774 6587 0.105555 CCATGAGCTCCTCCTCCTCT 60.106 60.000 12.15 0.00 0.00 3.69
3775 6588 1.146774 CCATGAGCTCCTCCTCCTCTA 59.853 57.143 12.15 0.00 0.00 2.43
3776 6589 2.238521 CATGAGCTCCTCCTCCTCTAC 58.761 57.143 12.15 0.00 0.00 2.59
3777 6590 0.553819 TGAGCTCCTCCTCCTCTACC 59.446 60.000 12.15 0.00 0.00 3.18
3778 6591 0.536460 GAGCTCCTCCTCCTCTACCG 60.536 65.000 0.87 0.00 0.00 4.02
3779 6592 1.227946 GCTCCTCCTCCTCTACCGT 59.772 63.158 0.00 0.00 0.00 4.83
3780 6593 0.820482 GCTCCTCCTCCTCTACCGTC 60.820 65.000 0.00 0.00 0.00 4.79
3781 6594 0.841289 CTCCTCCTCCTCTACCGTCT 59.159 60.000 0.00 0.00 0.00 4.18
3782 6595 0.838608 TCCTCCTCCTCTACCGTCTC 59.161 60.000 0.00 0.00 0.00 3.36
3783 6596 0.179012 CCTCCTCCTCTACCGTCTCC 60.179 65.000 0.00 0.00 0.00 3.71
3784 6597 0.547075 CTCCTCCTCTACCGTCTCCA 59.453 60.000 0.00 0.00 0.00 3.86
3785 6598 0.997363 TCCTCCTCTACCGTCTCCAA 59.003 55.000 0.00 0.00 0.00 3.53
3786 6599 1.104630 CCTCCTCTACCGTCTCCAAC 58.895 60.000 0.00 0.00 0.00 3.77
3787 6600 1.104630 CTCCTCTACCGTCTCCAACC 58.895 60.000 0.00 0.00 0.00 3.77
3788 6601 0.324091 TCCTCTACCGTCTCCAACCC 60.324 60.000 0.00 0.00 0.00 4.11
3789 6602 1.664321 CCTCTACCGTCTCCAACCCG 61.664 65.000 0.00 0.00 0.00 5.28
3790 6603 0.964358 CTCTACCGTCTCCAACCCGT 60.964 60.000 0.00 0.00 0.00 5.28
3791 6604 0.540365 TCTACCGTCTCCAACCCGTT 60.540 55.000 0.00 0.00 0.00 4.44
3792 6605 0.108945 CTACCGTCTCCAACCCGTTC 60.109 60.000 0.00 0.00 0.00 3.95
3793 6606 1.865788 TACCGTCTCCAACCCGTTCG 61.866 60.000 0.00 0.00 0.00 3.95
3794 6607 3.110178 CGTCTCCAACCCGTTCGC 61.110 66.667 0.00 0.00 0.00 4.70
3795 6608 2.741211 GTCTCCAACCCGTTCGCC 60.741 66.667 0.00 0.00 0.00 5.54
3796 6609 4.367023 TCTCCAACCCGTTCGCCG 62.367 66.667 0.00 0.00 0.00 6.46
3813 6626 3.756727 GGTCCCGACGTCACCCTC 61.757 72.222 17.16 1.49 0.00 4.30
3814 6627 4.112341 GTCCCGACGTCACCCTCG 62.112 72.222 17.16 0.09 0.00 4.63
3815 6628 4.648626 TCCCGACGTCACCCTCGT 62.649 66.667 17.16 0.00 44.27 4.18
3822 6635 3.823330 GTCACCCTCGTCCGCGAT 61.823 66.667 8.23 0.00 46.80 4.58
3823 6636 3.515286 TCACCCTCGTCCGCGATC 61.515 66.667 8.23 0.00 46.80 3.69
3824 6637 3.518998 CACCCTCGTCCGCGATCT 61.519 66.667 8.23 0.00 46.80 2.75
3825 6638 3.210528 ACCCTCGTCCGCGATCTC 61.211 66.667 8.23 0.00 46.80 2.75
3826 6639 3.209812 CCCTCGTCCGCGATCTCA 61.210 66.667 8.23 0.00 46.80 3.27
3827 6640 2.771639 CCCTCGTCCGCGATCTCAA 61.772 63.158 8.23 0.00 46.80 3.02
3828 6641 1.586564 CCTCGTCCGCGATCTCAAC 60.587 63.158 8.23 0.00 46.80 3.18
3829 6642 1.136774 CTCGTCCGCGATCTCAACA 59.863 57.895 8.23 0.00 46.80 3.33
3830 6643 0.248661 CTCGTCCGCGATCTCAACAT 60.249 55.000 8.23 0.00 46.80 2.71
3831 6644 0.248498 TCGTCCGCGATCTCAACATC 60.248 55.000 8.23 0.00 42.81 3.06
3832 6645 1.209275 CGTCCGCGATCTCAACATCC 61.209 60.000 8.23 0.00 41.33 3.51
3833 6646 0.179111 GTCCGCGATCTCAACATCCA 60.179 55.000 8.23 0.00 0.00 3.41
3834 6647 0.752658 TCCGCGATCTCAACATCCAT 59.247 50.000 8.23 0.00 0.00 3.41
3835 6648 0.863799 CCGCGATCTCAACATCCATG 59.136 55.000 8.23 0.00 0.00 3.66
3836 6649 1.538849 CCGCGATCTCAACATCCATGA 60.539 52.381 8.23 0.00 0.00 3.07
3837 6650 1.791204 CGCGATCTCAACATCCATGAG 59.209 52.381 0.00 0.00 44.53 2.90
3838 6651 1.530293 GCGATCTCAACATCCATGAGC 59.470 52.381 0.00 0.00 43.19 4.26
3839 6652 1.791204 CGATCTCAACATCCATGAGCG 59.209 52.381 0.00 0.00 43.19 5.03
3840 6653 1.530293 GATCTCAACATCCATGAGCGC 59.470 52.381 0.00 0.00 43.19 5.92
3841 6654 0.807275 TCTCAACATCCATGAGCGCG 60.807 55.000 0.00 0.00 43.19 6.86
3842 6655 1.079197 TCAACATCCATGAGCGCGT 60.079 52.632 8.43 0.00 0.00 6.01
3843 6656 1.083806 TCAACATCCATGAGCGCGTC 61.084 55.000 8.43 4.75 0.00 5.19
3844 6657 1.815421 AACATCCATGAGCGCGTCC 60.815 57.895 8.43 0.00 0.00 4.79
3845 6658 2.969238 CATCCATGAGCGCGTCCC 60.969 66.667 8.43 0.00 0.00 4.46
3846 6659 4.592192 ATCCATGAGCGCGTCCCG 62.592 66.667 8.43 0.00 40.75 5.14
3856 6669 3.423154 GCGTCCCGGTCAAGCTTG 61.423 66.667 20.81 20.81 0.00 4.01
3857 6670 2.342279 CGTCCCGGTCAAGCTTGA 59.658 61.111 25.16 25.16 34.20 3.02
3866 6679 3.094386 TCAAGCTTGACCACACCAC 57.906 52.632 25.16 0.00 31.01 4.16
3867 6680 0.465460 TCAAGCTTGACCACACCACC 60.465 55.000 25.16 0.00 31.01 4.61
3868 6681 1.525995 AAGCTTGACCACACCACCG 60.526 57.895 0.00 0.00 0.00 4.94
3869 6682 3.660111 GCTTGACCACACCACCGC 61.660 66.667 0.00 0.00 0.00 5.68
3870 6683 2.978010 CTTGACCACACCACCGCC 60.978 66.667 0.00 0.00 0.00 6.13
3871 6684 3.476031 CTTGACCACACCACCGCCT 62.476 63.158 0.00 0.00 0.00 5.52
3872 6685 3.469863 TTGACCACACCACCGCCTC 62.470 63.158 0.00 0.00 0.00 4.70
3873 6686 4.699522 GACCACACCACCGCCTCC 62.700 72.222 0.00 0.00 0.00 4.30
3875 6688 3.000819 CCACACCACCGCCTCCTA 61.001 66.667 0.00 0.00 0.00 2.94
3876 6689 2.264794 CACACCACCGCCTCCTAC 59.735 66.667 0.00 0.00 0.00 3.18
3877 6690 2.119832 ACACCACCGCCTCCTACT 59.880 61.111 0.00 0.00 0.00 2.57
3878 6691 1.982938 ACACCACCGCCTCCTACTC 60.983 63.158 0.00 0.00 0.00 2.59
3879 6692 2.363925 ACCACCGCCTCCTACTCC 60.364 66.667 0.00 0.00 0.00 3.85
3880 6693 3.528370 CCACCGCCTCCTACTCCG 61.528 72.222 0.00 0.00 0.00 4.63
3881 6694 4.208686 CACCGCCTCCTACTCCGC 62.209 72.222 0.00 0.00 0.00 5.54
3884 6697 4.554363 CGCCTCCTACTCCGCGTG 62.554 72.222 4.92 0.00 39.78 5.34
3885 6698 4.208686 GCCTCCTACTCCGCGTGG 62.209 72.222 9.28 9.28 0.00 4.94
3886 6699 2.439701 CCTCCTACTCCGCGTGGA 60.440 66.667 18.43 18.43 43.88 4.02
3887 6700 2.050350 CCTCCTACTCCGCGTGGAA 61.050 63.158 20.06 3.96 45.87 3.53
3888 6701 1.433879 CTCCTACTCCGCGTGGAAG 59.566 63.158 20.06 14.20 45.87 3.46
3889 6702 2.202756 CCTACTCCGCGTGGAAGC 60.203 66.667 20.06 0.00 45.87 3.86
3900 6713 2.363220 GCGTGGAAGCGATATTTTTCG 58.637 47.619 0.00 0.00 41.99 3.46
3910 6723 3.594312 CGATATTTTTCGCTCGTGTTCC 58.406 45.455 0.00 0.00 31.60 3.62
3911 6724 3.594312 GATATTTTTCGCTCGTGTTCCG 58.406 45.455 0.00 0.00 38.13 4.30
3912 6725 1.223187 ATTTTTCGCTCGTGTTCCGT 58.777 45.000 0.00 0.00 37.94 4.69
3913 6726 0.302288 TTTTTCGCTCGTGTTCCGTG 59.698 50.000 0.00 0.00 37.94 4.94
3914 6727 0.528033 TTTTCGCTCGTGTTCCGTGA 60.528 50.000 0.00 0.00 37.94 4.35
3915 6728 0.937699 TTTCGCTCGTGTTCCGTGAG 60.938 55.000 0.00 0.00 37.94 3.51
3916 6729 2.050351 CGCTCGTGTTCCGTGAGT 60.050 61.111 0.00 0.00 37.94 3.41
3917 6730 1.208358 CGCTCGTGTTCCGTGAGTA 59.792 57.895 0.00 0.00 37.94 2.59
3918 6731 1.063951 CGCTCGTGTTCCGTGAGTAC 61.064 60.000 0.00 0.00 37.94 2.73
3919 6732 0.731855 GCTCGTGTTCCGTGAGTACC 60.732 60.000 0.00 0.00 37.94 3.34
3920 6733 0.879765 CTCGTGTTCCGTGAGTACCT 59.120 55.000 0.00 0.00 37.94 3.08
3921 6734 0.877071 TCGTGTTCCGTGAGTACCTC 59.123 55.000 0.00 0.00 37.94 3.85
3922 6735 0.109412 CGTGTTCCGTGAGTACCTCC 60.109 60.000 0.00 0.00 0.00 4.30
3923 6736 1.254954 GTGTTCCGTGAGTACCTCCT 58.745 55.000 0.00 0.00 0.00 3.69
3924 6737 1.617357 GTGTTCCGTGAGTACCTCCTT 59.383 52.381 0.00 0.00 0.00 3.36
3925 6738 1.891150 TGTTCCGTGAGTACCTCCTTC 59.109 52.381 0.00 0.00 0.00 3.46
3926 6739 1.891150 GTTCCGTGAGTACCTCCTTCA 59.109 52.381 0.00 0.00 0.00 3.02
3927 6740 1.542492 TCCGTGAGTACCTCCTTCAC 58.458 55.000 2.85 2.85 38.23 3.18
3930 6743 0.108756 GTGAGTACCTCCTTCACGGC 60.109 60.000 0.00 0.00 32.81 5.68
3931 6744 1.255667 TGAGTACCTCCTTCACGGCC 61.256 60.000 0.00 0.00 0.00 6.13
3932 6745 1.229082 AGTACCTCCTTCACGGCCA 60.229 57.895 2.24 0.00 0.00 5.36
3933 6746 1.079336 GTACCTCCTTCACGGCCAC 60.079 63.158 2.24 0.00 0.00 5.01
3963 6776 2.887568 GTGGACTCCGCGCTCATG 60.888 66.667 5.56 0.00 0.00 3.07
3964 6777 3.068064 TGGACTCCGCGCTCATGA 61.068 61.111 5.56 0.00 0.00 3.07
3965 6778 2.419198 GGACTCCGCGCTCATGAT 59.581 61.111 5.56 0.00 0.00 2.45
3966 6779 1.663074 GGACTCCGCGCTCATGATC 60.663 63.158 5.56 0.00 0.00 2.92
3967 6780 1.663074 GACTCCGCGCTCATGATCC 60.663 63.158 5.56 0.00 0.00 3.36
3968 6781 2.355445 GACTCCGCGCTCATGATCCA 62.355 60.000 5.56 0.00 0.00 3.41
3969 6782 1.953138 CTCCGCGCTCATGATCCAC 60.953 63.158 5.56 0.00 0.00 4.02
3970 6783 3.333189 CCGCGCTCATGATCCACG 61.333 66.667 5.56 0.00 0.00 4.94
3971 6784 2.278792 CGCGCTCATGATCCACGA 60.279 61.111 5.56 0.00 0.00 4.35
3972 6785 2.580470 CGCGCTCATGATCCACGAC 61.580 63.158 5.56 0.00 0.00 4.34
3973 6786 2.580470 GCGCTCATGATCCACGACG 61.580 63.158 0.00 0.00 0.00 5.12
3974 6787 1.064134 CGCTCATGATCCACGACGA 59.936 57.895 0.00 0.00 0.00 4.20
3975 6788 0.932123 CGCTCATGATCCACGACGAG 60.932 60.000 0.00 0.00 0.00 4.18
3976 6789 0.596083 GCTCATGATCCACGACGAGG 60.596 60.000 4.78 4.78 0.00 4.63
3977 6790 1.025041 CTCATGATCCACGACGAGGA 58.975 55.000 16.50 16.50 39.97 3.71
3978 6791 1.001924 CTCATGATCCACGACGAGGAG 60.002 57.143 18.84 6.12 38.83 3.69
3979 6792 0.741326 CATGATCCACGACGAGGAGT 59.259 55.000 18.84 7.85 38.83 3.85
3980 6793 0.741326 ATGATCCACGACGAGGAGTG 59.259 55.000 18.84 0.00 38.83 3.51
3984 6797 4.794164 CACGACGAGGAGTGGATG 57.206 61.111 0.00 0.00 34.93 3.51
3985 6798 2.180674 CACGACGAGGAGTGGATGA 58.819 57.895 0.00 0.00 34.93 2.92
3986 6799 0.741326 CACGACGAGGAGTGGATGAT 59.259 55.000 0.00 0.00 34.93 2.45
3987 6800 1.025812 ACGACGAGGAGTGGATGATC 58.974 55.000 0.00 0.00 32.54 2.92
3988 6801 0.312416 CGACGAGGAGTGGATGATCC 59.688 60.000 4.05 4.05 36.96 3.36
3993 6806 1.698506 AGGAGTGGATGATCCTCGAC 58.301 55.000 13.44 7.59 42.44 4.20
3994 6807 0.312416 GGAGTGGATGATCCTCGACG 59.688 60.000 13.44 0.00 37.46 5.12
3995 6808 0.318275 GAGTGGATGATCCTCGACGC 60.318 60.000 13.44 0.69 37.46 5.19
3996 6809 1.300233 GTGGATGATCCTCGACGCC 60.300 63.158 13.44 0.00 37.46 5.68
3997 6810 1.756561 TGGATGATCCTCGACGCCA 60.757 57.895 13.44 0.00 37.46 5.69
3998 6811 1.300233 GGATGATCCTCGACGCCAC 60.300 63.158 3.71 0.00 32.53 5.01
3999 6812 1.300233 GATGATCCTCGACGCCACC 60.300 63.158 0.00 0.00 0.00 4.61
4000 6813 2.016393 GATGATCCTCGACGCCACCA 62.016 60.000 0.00 0.00 0.00 4.17
4001 6814 1.402896 ATGATCCTCGACGCCACCAT 61.403 55.000 0.00 0.00 0.00 3.55
4002 6815 1.300233 GATCCTCGACGCCACCATC 60.300 63.158 0.00 0.00 0.00 3.51
4003 6816 2.016393 GATCCTCGACGCCACCATCA 62.016 60.000 0.00 0.00 0.00 3.07
4004 6817 1.402896 ATCCTCGACGCCACCATCAT 61.403 55.000 0.00 0.00 0.00 2.45
4005 6818 1.592669 CCTCGACGCCACCATCATC 60.593 63.158 0.00 0.00 0.00 2.92
4006 6819 1.592669 CTCGACGCCACCATCATCC 60.593 63.158 0.00 0.00 0.00 3.51
4007 6820 2.961721 CGACGCCACCATCATCCG 60.962 66.667 0.00 0.00 0.00 4.18
4008 6821 3.272334 GACGCCACCATCATCCGC 61.272 66.667 0.00 0.00 0.00 5.54
4009 6822 3.740128 GACGCCACCATCATCCGCT 62.740 63.158 0.00 0.00 0.00 5.52
4010 6823 3.274586 CGCCACCATCATCCGCTG 61.275 66.667 0.00 0.00 0.00 5.18
4011 6824 2.903855 GCCACCATCATCCGCTGG 60.904 66.667 0.00 0.00 38.55 4.85
4012 6825 2.591753 CCACCATCATCCGCTGGT 59.408 61.111 0.00 0.00 46.68 4.00
4013 6826 1.077501 CCACCATCATCCGCTGGTT 60.078 57.895 0.00 0.00 43.21 3.67
4014 6827 1.097547 CCACCATCATCCGCTGGTTC 61.098 60.000 0.00 0.00 43.21 3.62
4015 6828 0.107508 CACCATCATCCGCTGGTTCT 60.108 55.000 0.00 0.00 43.21 3.01
4016 6829 1.138859 CACCATCATCCGCTGGTTCTA 59.861 52.381 0.00 0.00 43.21 2.10
4017 6830 1.139058 ACCATCATCCGCTGGTTCTAC 59.861 52.381 0.00 0.00 43.21 2.59
4018 6831 1.541233 CCATCATCCGCTGGTTCTACC 60.541 57.143 0.00 0.00 39.22 3.18
4019 6832 1.414181 CATCATCCGCTGGTTCTACCT 59.586 52.381 0.00 0.00 39.58 3.08
4020 6833 1.112113 TCATCCGCTGGTTCTACCTC 58.888 55.000 0.00 0.00 39.58 3.85
4021 6834 0.824109 CATCCGCTGGTTCTACCTCA 59.176 55.000 0.00 0.00 39.58 3.86
4022 6835 0.824759 ATCCGCTGGTTCTACCTCAC 59.175 55.000 0.00 0.00 39.58 3.51
4023 6836 1.218316 CCGCTGGTTCTACCTCACC 59.782 63.158 0.00 0.00 39.58 4.02
4024 6837 1.541310 CCGCTGGTTCTACCTCACCA 61.541 60.000 0.00 0.00 40.98 4.17
4025 6838 0.537188 CGCTGGTTCTACCTCACCAT 59.463 55.000 0.00 0.00 42.35 3.55
4026 6839 1.471676 CGCTGGTTCTACCTCACCATC 60.472 57.143 0.00 0.00 42.35 3.51
4027 6840 1.834263 GCTGGTTCTACCTCACCATCT 59.166 52.381 0.00 0.00 42.35 2.90
4028 6841 2.159028 GCTGGTTCTACCTCACCATCTC 60.159 54.545 0.00 0.00 42.35 2.75
4029 6842 2.432510 CTGGTTCTACCTCACCATCTCC 59.567 54.545 0.00 0.00 42.35 3.71
4030 6843 2.225522 TGGTTCTACCTCACCATCTCCA 60.226 50.000 0.00 0.00 38.20 3.86
4031 6844 2.432510 GGTTCTACCTCACCATCTCCAG 59.567 54.545 0.00 0.00 34.73 3.86
4032 6845 1.781786 TCTACCTCACCATCTCCAGC 58.218 55.000 0.00 0.00 0.00 4.85
4033 6846 0.387202 CTACCTCACCATCTCCAGCG 59.613 60.000 0.00 0.00 0.00 5.18
4034 6847 0.033503 TACCTCACCATCTCCAGCGA 60.034 55.000 0.00 0.00 0.00 4.93
4035 6848 1.142748 CCTCACCATCTCCAGCGAC 59.857 63.158 0.00 0.00 0.00 5.19
4036 6849 1.607801 CCTCACCATCTCCAGCGACA 61.608 60.000 0.00 0.00 0.00 4.35
4037 6850 0.463204 CTCACCATCTCCAGCGACAT 59.537 55.000 0.00 0.00 0.00 3.06
4038 6851 0.461548 TCACCATCTCCAGCGACATC 59.538 55.000 0.00 0.00 0.00 3.06
4039 6852 0.463204 CACCATCTCCAGCGACATCT 59.537 55.000 0.00 0.00 0.00 2.90
4040 6853 1.134580 CACCATCTCCAGCGACATCTT 60.135 52.381 0.00 0.00 0.00 2.40
4041 6854 1.137872 ACCATCTCCAGCGACATCTTC 59.862 52.381 0.00 0.00 0.00 2.87
4042 6855 1.539929 CCATCTCCAGCGACATCTTCC 60.540 57.143 0.00 0.00 0.00 3.46
4043 6856 1.137675 CATCTCCAGCGACATCTTCCA 59.862 52.381 0.00 0.00 0.00 3.53
4044 6857 0.532573 TCTCCAGCGACATCTTCCAC 59.467 55.000 0.00 0.00 0.00 4.02
4045 6858 0.247460 CTCCAGCGACATCTTCCACA 59.753 55.000 0.00 0.00 0.00 4.17
4046 6859 0.037326 TCCAGCGACATCTTCCACAC 60.037 55.000 0.00 0.00 0.00 3.82
4047 6860 1.021390 CCAGCGACATCTTCCACACC 61.021 60.000 0.00 0.00 0.00 4.16
4048 6861 1.079819 AGCGACATCTTCCACACCG 60.080 57.895 0.00 0.00 0.00 4.94
4049 6862 1.374252 GCGACATCTTCCACACCGT 60.374 57.895 0.00 0.00 0.00 4.83
4050 6863 1.626654 GCGACATCTTCCACACCGTG 61.627 60.000 0.00 0.00 0.00 4.94
4065 6878 4.240049 GTGGTGAACGACGAGGAC 57.760 61.111 0.00 0.00 0.00 3.85
4066 6879 1.728426 GTGGTGAACGACGAGGACG 60.728 63.158 0.00 0.00 45.75 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.280174 GTTGATTTTCGTATAATATTCTCCCCA 57.720 33.333 0.00 0.00 0.00 4.96
37 38 6.712547 TCAAACATGGTTTCCACAAAGTTTTT 59.287 30.769 0.00 0.00 35.80 1.94
45 46 5.163499 GGTACTTTCAAACATGGTTTCCACA 60.163 40.000 0.00 0.00 35.80 4.17
54 55 8.812329 TCAAATTTTTCGGTACTTTCAAACATG 58.188 29.630 0.00 0.00 0.00 3.21
86 87 9.182214 AGAACATTATCCTCTTAACGTACTACA 57.818 33.333 0.00 0.00 0.00 2.74
99 101 7.734924 TGCATGACAATAGAACATTATCCTC 57.265 36.000 0.00 0.00 0.00 3.71
105 107 9.491675 TGAAATTTTGCATGACAATAGAACATT 57.508 25.926 0.00 0.00 38.31 2.71
122 124 7.471721 TCGCATCCTGTATACTTGAAATTTTG 58.528 34.615 4.17 0.00 0.00 2.44
123 125 7.624360 TCGCATCCTGTATACTTGAAATTTT 57.376 32.000 4.17 0.00 0.00 1.82
136 138 3.222603 TCTTCATAGCTCGCATCCTGTA 58.777 45.455 0.00 0.00 0.00 2.74
138 140 2.808523 TCTTCATAGCTCGCATCCTG 57.191 50.000 0.00 0.00 0.00 3.86
211 223 9.890352 GATGTTGGCTATGAAAGAGATAAAATC 57.110 33.333 0.00 0.00 0.00 2.17
221 233 2.643551 ACGGGATGTTGGCTATGAAAG 58.356 47.619 0.00 0.00 0.00 2.62
232 244 4.825085 AGTTCAAACATGTTACGGGATGTT 59.175 37.500 12.39 0.00 43.16 2.71
257 269 9.491675 TGATGTTTTATTGTCATGCAAAATTCT 57.508 25.926 6.65 0.00 40.91 2.40
258 270 9.532697 GTGATGTTTTATTGTCATGCAAAATTC 57.467 29.630 6.65 0.00 40.91 2.17
270 282 8.650143 ATGTTAAGAGGGTGATGTTTTATTGT 57.350 30.769 0.00 0.00 0.00 2.71
276 288 4.044065 TGGGATGTTAAGAGGGTGATGTTT 59.956 41.667 0.00 0.00 0.00 2.83
308 328 8.806634 CGAGAAAAATGATGTTTTGAAGTTTCA 58.193 29.630 0.00 0.00 30.87 2.69
309 329 8.807581 ACGAGAAAAATGATGTTTTGAAGTTTC 58.192 29.630 0.00 0.00 30.87 2.78
330 350 6.788684 TGAAAATCGATAAAAACCACGAGA 57.211 33.333 0.00 0.00 38.12 4.04
334 354 9.956797 CATTCAATGAAAATCGATAAAAACCAC 57.043 29.630 0.00 0.00 0.00 4.16
342 362 9.352784 GAAACCAACATTCAATGAAAATCGATA 57.647 29.630 3.79 0.00 0.00 2.92
370 390 5.124776 TGGCGAACCAGGAAAAATATTGTAG 59.875 40.000 0.00 0.00 42.67 2.74
373 393 4.448537 TGGCGAACCAGGAAAAATATTG 57.551 40.909 0.00 0.00 42.67 1.90
392 412 1.634757 TACTTTGCGCGCTGACATGG 61.635 55.000 33.29 16.35 0.00 3.66
394 414 0.374758 CATACTTTGCGCGCTGACAT 59.625 50.000 33.29 15.55 0.00 3.06
401 421 1.518929 GACTAGCTCATACTTTGCGCG 59.481 52.381 0.00 0.00 41.03 6.86
416 436 2.605818 CCGAGTCGAGAGTTGAGACTAG 59.394 54.545 15.64 0.00 44.30 2.57
463 483 2.359230 GTTCTTGCCGCCTGCTCT 60.359 61.111 0.00 0.00 42.00 4.09
468 488 4.699522 GGGTCGTTCTTGCCGCCT 62.700 66.667 0.00 0.00 0.00 5.52
488 508 3.925238 CCGTACTGCATTCGCGCC 61.925 66.667 0.00 0.00 42.97 6.53
489 509 4.575245 GCCGTACTGCATTCGCGC 62.575 66.667 0.00 0.00 42.97 6.86
490 510 4.265630 CGCCGTACTGCATTCGCG 62.266 66.667 10.03 0.00 42.97 5.87
491 511 4.575245 GCGCCGTACTGCATTCGC 62.575 66.667 10.03 0.87 39.24 4.70
492 512 2.860628 GAGCGCCGTACTGCATTCG 61.861 63.158 2.29 0.00 0.00 3.34
493 513 2.526120 GGAGCGCCGTACTGCATTC 61.526 63.158 2.29 5.88 0.00 2.67
494 514 2.511600 GGAGCGCCGTACTGCATT 60.512 61.111 2.29 0.00 0.00 3.56
495 515 3.770040 TGGAGCGCCGTACTGCAT 61.770 61.111 2.29 0.00 36.79 3.96
496 516 4.735132 GTGGAGCGCCGTACTGCA 62.735 66.667 2.29 0.00 36.79 4.41
497 517 4.735132 TGTGGAGCGCCGTACTGC 62.735 66.667 2.29 0.00 36.79 4.40
498 518 2.048597 TTGTGGAGCGCCGTACTG 60.049 61.111 2.29 0.00 36.79 2.74
499 519 1.812686 TTCTTGTGGAGCGCCGTACT 61.813 55.000 2.29 0.00 36.79 2.73
500 520 1.352156 CTTCTTGTGGAGCGCCGTAC 61.352 60.000 2.29 0.37 36.79 3.67
501 521 1.080093 CTTCTTGTGGAGCGCCGTA 60.080 57.895 2.29 0.00 36.79 4.02
502 522 2.357517 CTTCTTGTGGAGCGCCGT 60.358 61.111 2.29 0.00 36.79 5.68
554 591 1.605712 GGAGTTTCTGACCTCGTGTGG 60.606 57.143 0.00 0.00 0.00 4.17
604 641 0.320771 CGTTGTGGAGTCAAGGAGGG 60.321 60.000 0.00 0.00 35.91 4.30
628 665 4.154918 GCGAAAATGACTTCACTGGATTCT 59.845 41.667 0.00 0.00 0.00 2.40
711 758 2.260844 ATAATGGCTCCACATGACGG 57.739 50.000 0.00 0.00 0.00 4.79
810 871 0.171231 TCTCCACGACGAAGCAGATG 59.829 55.000 0.00 0.00 0.00 2.90
838 899 2.000447 GCTTGGACCTATGAACGTCAC 59.000 52.381 0.00 0.00 0.00 3.67
920 1006 3.251004 GGATGAAATTGTATGGCTCGTCC 59.749 47.826 0.00 0.00 35.60 4.79
928 1014 6.528537 TGAAAGTGGGGATGAAATTGTATG 57.471 37.500 0.00 0.00 0.00 2.39
939 1025 6.204852 TGAGCATTATATGAAAGTGGGGAT 57.795 37.500 0.00 0.00 0.00 3.85
1079 1179 2.511145 GGCTGAAGCTGAGCGAGG 60.511 66.667 10.97 0.00 41.70 4.63
1574 1743 1.070105 TGGTACGTGACAGTTGCCC 59.930 57.895 0.00 0.00 0.00 5.36
1673 2154 0.971447 GACCTCCTCCGGTAGCTGTT 60.971 60.000 0.00 0.00 37.42 3.16
2301 3593 2.559668 CTGTGGCCATGTGAGACATTTT 59.440 45.455 9.72 0.00 36.53 1.82
2649 3944 1.144093 ACCAACGTGAAGGATTTCCCA 59.856 47.619 8.73 0.00 37.41 4.37
2665 3960 1.694525 TCCACACCCACCTGACCAA 60.695 57.895 0.00 0.00 0.00 3.67
2688 3983 1.070758 AGGATCGCGTTCTTGCCATAT 59.929 47.619 16.17 0.00 0.00 1.78
2766 4061 4.498520 AGCCCGACGATGAGCACG 62.499 66.667 0.00 0.00 0.00 5.34
2814 4109 0.616395 TGGTCTGGGCAATAGACGGA 60.616 55.000 8.89 0.00 44.24 4.69
2821 4116 2.048023 CGTGCATGGTCTGGGCAAT 61.048 57.895 0.00 0.00 39.57 3.56
2999 4297 2.572290 AGTCGGAAGAAAGTTTGGTGG 58.428 47.619 0.00 0.00 45.01 4.61
3005 4303 3.729966 GAGGACAAGTCGGAAGAAAGTT 58.270 45.455 0.00 0.00 45.01 2.66
3006 4304 2.288273 CGAGGACAAGTCGGAAGAAAGT 60.288 50.000 0.00 0.00 45.01 2.66
3020 4318 1.520600 TAGCAACGCAGTCGAGGACA 61.521 55.000 0.00 0.00 45.00 4.02
3041 4339 7.577303 TCAATTAGTTAGATCCTTGGATTGCT 58.423 34.615 3.43 0.42 0.00 3.91
3104 4407 2.165641 CTGTCAATGCATGTTGGATGCT 59.834 45.455 0.00 0.00 44.79 3.79
3105 4408 2.536365 CTGTCAATGCATGTTGGATGC 58.464 47.619 0.00 0.00 44.76 3.91
3112 4415 3.148412 TGTTAGTGCTGTCAATGCATGT 58.852 40.909 0.00 0.00 42.69 3.21
3128 4431 5.525378 GGGTGCTCTCAGATTTACATGTTAG 59.475 44.000 2.30 0.00 0.00 2.34
3129 4432 5.428253 GGGTGCTCTCAGATTTACATGTTA 58.572 41.667 2.30 0.00 0.00 2.41
3132 4435 3.209410 GGGGTGCTCTCAGATTTACATG 58.791 50.000 0.00 0.00 0.00 3.21
3133 4436 2.846206 TGGGGTGCTCTCAGATTTACAT 59.154 45.455 0.00 0.00 0.00 2.29
3134 4437 2.027192 GTGGGGTGCTCTCAGATTTACA 60.027 50.000 0.00 0.00 0.00 2.41
3135 4438 2.633488 GTGGGGTGCTCTCAGATTTAC 58.367 52.381 0.00 0.00 0.00 2.01
3140 4463 2.997315 CGGTGGGGTGCTCTCAGA 60.997 66.667 0.00 0.00 0.00 3.27
3151 4740 2.702592 TTGTTAGATAAGGCGGTGGG 57.297 50.000 0.00 0.00 0.00 4.61
3157 4746 7.761249 AGCACAAAATGAATTGTTAGATAAGGC 59.239 33.333 0.00 0.00 41.44 4.35
3188 4777 4.000988 AGAGAAATGTTTACGCACGGATT 58.999 39.130 0.00 0.00 0.00 3.01
3216 4805 1.075374 TGTTCTGTGATTTGGGAGGGG 59.925 52.381 0.00 0.00 0.00 4.79
3217 4806 2.584835 TGTTCTGTGATTTGGGAGGG 57.415 50.000 0.00 0.00 0.00 4.30
3228 4818 6.193761 GCAAAATTTGTCCAAATGTTCTGTG 58.806 36.000 7.60 0.00 40.57 3.66
3230 4820 5.433855 CGCAAAATTTGTCCAAATGTTCTG 58.566 37.500 7.60 0.00 40.57 3.02
3246 4836 1.336795 GCCACTACTTTGCCGCAAAAT 60.337 47.619 18.78 12.25 32.75 1.82
3247 4837 0.031449 GCCACTACTTTGCCGCAAAA 59.969 50.000 18.78 5.14 32.75 2.44
3255 4845 1.340114 GGGAGGAAGGCCACTACTTTG 60.340 57.143 5.01 0.00 36.29 2.77
3256 4846 0.992695 GGGAGGAAGGCCACTACTTT 59.007 55.000 5.01 0.00 36.29 2.66
3257 4847 0.914902 GGGGAGGAAGGCCACTACTT 60.915 60.000 5.01 0.00 36.29 2.24
3260 4850 1.615424 GTGGGGAGGAAGGCCACTA 60.615 63.158 5.01 0.00 36.29 2.74
3262 4852 2.155197 ATTGTGGGGAGGAAGGCCAC 62.155 60.000 5.01 0.00 36.29 5.01
3263 4853 1.442886 AATTGTGGGGAGGAAGGCCA 61.443 55.000 5.01 0.00 36.29 5.36
3264 4854 0.972471 CAATTGTGGGGAGGAAGGCC 60.972 60.000 0.00 0.00 0.00 5.19
3265 4855 0.039618 TCAATTGTGGGGAGGAAGGC 59.960 55.000 5.13 0.00 0.00 4.35
3266 4856 1.839424 GTCAATTGTGGGGAGGAAGG 58.161 55.000 5.13 0.00 0.00 3.46
3267 4857 1.453155 CGTCAATTGTGGGGAGGAAG 58.547 55.000 5.13 0.00 0.00 3.46
3268 4858 0.037590 CCGTCAATTGTGGGGAGGAA 59.962 55.000 5.13 0.00 0.00 3.36
3269 4859 1.682849 CCGTCAATTGTGGGGAGGA 59.317 57.895 5.13 0.00 0.00 3.71
3270 4860 2.046285 GCCGTCAATTGTGGGGAGG 61.046 63.158 17.30 9.30 0.00 4.30
3271 4861 1.002134 AGCCGTCAATTGTGGGGAG 60.002 57.895 17.30 0.66 0.00 4.30
3272 4862 1.002624 GAGCCGTCAATTGTGGGGA 60.003 57.895 17.30 0.00 0.00 4.81
3273 4863 2.046285 GGAGCCGTCAATTGTGGGG 61.046 63.158 17.30 12.53 0.00 4.96
3274 4864 0.680921 ATGGAGCCGTCAATTGTGGG 60.681 55.000 17.30 14.54 0.00 4.61
3275 4865 0.452987 CATGGAGCCGTCAATTGTGG 59.547 55.000 5.13 9.94 0.00 4.17
3276 4866 1.131126 GTCATGGAGCCGTCAATTGTG 59.869 52.381 5.13 0.00 0.00 3.33
3280 4870 1.815421 GCGTCATGGAGCCGTCAAT 60.815 57.895 0.00 0.00 0.00 2.57
3281 4871 2.434185 GCGTCATGGAGCCGTCAA 60.434 61.111 0.00 0.00 0.00 3.18
3282 4872 3.647649 CTGCGTCATGGAGCCGTCA 62.648 63.158 10.08 2.94 0.00 4.35
3283 4873 2.887568 CTGCGTCATGGAGCCGTC 60.888 66.667 10.08 0.00 0.00 4.79
3297 4887 1.966451 ACTGCTTACAACGCCCTGC 60.966 57.895 0.00 0.00 0.00 4.85
3298 4888 0.884704 ACACTGCTTACAACGCCCTG 60.885 55.000 0.00 0.00 0.00 4.45
3299 4889 0.884704 CACACTGCTTACAACGCCCT 60.885 55.000 0.00 0.00 0.00 5.19
3300 4890 1.164041 ACACACTGCTTACAACGCCC 61.164 55.000 0.00 0.00 0.00 6.13
3301 4891 0.234884 GACACACTGCTTACAACGCC 59.765 55.000 0.00 0.00 0.00 5.68
3302 4892 1.070577 CAGACACACTGCTTACAACGC 60.071 52.381 0.00 0.00 39.86 4.84
3303 4893 1.526887 CCAGACACACTGCTTACAACG 59.473 52.381 0.00 0.00 44.52 4.10
3307 4897 1.593196 TTGCCAGACACACTGCTTAC 58.407 50.000 0.00 0.00 44.52 2.34
3308 4898 2.153645 CATTGCCAGACACACTGCTTA 58.846 47.619 0.00 0.00 44.52 3.09
3309 4899 0.956633 CATTGCCAGACACACTGCTT 59.043 50.000 0.00 0.00 44.52 3.91
3312 4902 1.174078 TGCCATTGCCAGACACACTG 61.174 55.000 0.00 0.00 45.36 3.66
3314 4904 1.133025 GTATGCCATTGCCAGACACAC 59.867 52.381 0.00 0.00 36.33 3.82
3315 4905 1.004628 AGTATGCCATTGCCAGACACA 59.995 47.619 0.00 0.00 36.33 3.72
3316 4906 1.672881 GAGTATGCCATTGCCAGACAC 59.327 52.381 0.00 0.00 36.33 3.67
3317 4907 1.281577 TGAGTATGCCATTGCCAGACA 59.718 47.619 0.00 0.00 36.33 3.41
3318 4908 1.945394 CTGAGTATGCCATTGCCAGAC 59.055 52.381 0.00 0.00 36.33 3.51
3320 4910 0.666913 GCTGAGTATGCCATTGCCAG 59.333 55.000 0.00 0.00 36.33 4.85
3321 4911 0.256752 AGCTGAGTATGCCATTGCCA 59.743 50.000 0.00 0.00 36.33 4.92
3323 4913 3.209410 AGTAAGCTGAGTATGCCATTGC 58.791 45.455 0.00 0.00 38.26 3.56
3324 4914 7.502120 AATAAGTAAGCTGAGTATGCCATTG 57.498 36.000 0.00 0.00 0.00 2.82
3326 4916 6.425114 CGAAATAAGTAAGCTGAGTATGCCAT 59.575 38.462 0.00 0.00 0.00 4.40
3327 4917 5.753438 CGAAATAAGTAAGCTGAGTATGCCA 59.247 40.000 0.00 0.00 0.00 4.92
3328 4918 5.753921 ACGAAATAAGTAAGCTGAGTATGCC 59.246 40.000 0.00 0.00 0.00 4.40
3329 4919 6.830114 ACGAAATAAGTAAGCTGAGTATGC 57.170 37.500 0.00 0.00 0.00 3.14
3330 4920 9.690434 GAAAACGAAATAAGTAAGCTGAGTATG 57.310 33.333 0.00 0.00 0.00 2.39
3331 4921 9.431887 TGAAAACGAAATAAGTAAGCTGAGTAT 57.568 29.630 0.00 0.00 0.00 2.12
3333 4923 7.441458 ACTGAAAACGAAATAAGTAAGCTGAGT 59.559 33.333 0.00 0.00 0.00 3.41
3334 4924 7.797819 ACTGAAAACGAAATAAGTAAGCTGAG 58.202 34.615 0.00 0.00 0.00 3.35
3335 4925 7.724305 ACTGAAAACGAAATAAGTAAGCTGA 57.276 32.000 0.00 0.00 0.00 4.26
3336 4926 8.782533 AAACTGAAAACGAAATAAGTAAGCTG 57.217 30.769 0.00 0.00 0.00 4.24
3337 4927 9.797556 AAAAACTGAAAACGAAATAAGTAAGCT 57.202 25.926 0.00 0.00 0.00 3.74
3347 4937 9.813080 CAATTGGTTTAAAAACTGAAAACGAAA 57.187 25.926 0.00 0.00 35.45 3.46
3348 4938 9.204570 TCAATTGGTTTAAAAACTGAAAACGAA 57.795 25.926 5.42 0.00 38.89 3.85
3349 4939 8.758633 TCAATTGGTTTAAAAACTGAAAACGA 57.241 26.923 5.42 0.00 38.89 3.85
3351 4941 9.767684 CCTTCAATTGGTTTAAAAACTGAAAAC 57.232 29.630 5.42 0.00 38.89 2.43
3352 4942 9.508642 ACCTTCAATTGGTTTAAAAACTGAAAA 57.491 25.926 5.42 0.00 38.89 2.29
3355 4945 9.810545 CTTACCTTCAATTGGTTTAAAAACTGA 57.189 29.630 5.42 0.00 38.88 3.41
3356 4946 8.547894 GCTTACCTTCAATTGGTTTAAAAACTG 58.452 33.333 5.42 0.00 38.88 3.16
3357 4947 7.713507 GGCTTACCTTCAATTGGTTTAAAAACT 59.286 33.333 5.42 0.00 38.88 2.66
3358 4948 7.306925 CGGCTTACCTTCAATTGGTTTAAAAAC 60.307 37.037 5.42 0.00 38.88 2.43
3370 6103 3.743269 CGGGTATTCGGCTTACCTTCAAT 60.743 47.826 8.57 0.00 39.30 2.57
3373 6106 1.410153 TCGGGTATTCGGCTTACCTTC 59.590 52.381 8.57 0.00 39.30 3.46
3418 6151 8.469309 AATGGAGAAAAGAAAAGAATCAGTCA 57.531 30.769 0.00 0.00 0.00 3.41
3419 6152 9.755804 AAAATGGAGAAAAGAAAAGAATCAGTC 57.244 29.630 0.00 0.00 0.00 3.51
3473 6286 7.928873 AGAGGGGAAAGAAAGATATTACAACA 58.071 34.615 0.00 0.00 0.00 3.33
3502 6315 2.716017 GCGGGAGGGAGTGAGTGAG 61.716 68.421 0.00 0.00 0.00 3.51
3503 6316 2.680352 GCGGGAGGGAGTGAGTGA 60.680 66.667 0.00 0.00 0.00 3.41
3504 6317 3.775654 GGCGGGAGGGAGTGAGTG 61.776 72.222 0.00 0.00 0.00 3.51
3505 6318 3.846405 TTGGCGGGAGGGAGTGAGT 62.846 63.158 0.00 0.00 0.00 3.41
3506 6319 2.124507 TTTTGGCGGGAGGGAGTGAG 62.125 60.000 0.00 0.00 0.00 3.51
3507 6320 1.497309 ATTTTGGCGGGAGGGAGTGA 61.497 55.000 0.00 0.00 0.00 3.41
3509 6322 0.114364 AAATTTTGGCGGGAGGGAGT 59.886 50.000 0.00 0.00 0.00 3.85
3510 6323 0.817654 GAAATTTTGGCGGGAGGGAG 59.182 55.000 0.00 0.00 0.00 4.30
3512 6325 1.897423 GGAAATTTTGGCGGGAGGG 59.103 57.895 0.00 0.00 0.00 4.30
3515 6328 2.641277 GCCGGAAATTTTGGCGGGA 61.641 57.895 16.62 0.00 39.30 5.14
3516 6329 2.125713 GCCGGAAATTTTGGCGGG 60.126 61.111 16.62 8.19 39.30 6.13
3520 6333 3.333029 AGAAATGGCCGGAAATTTTGG 57.667 42.857 5.05 6.14 0.00 3.28
3521 6334 5.049828 GGATAGAAATGGCCGGAAATTTTG 58.950 41.667 5.05 0.00 0.00 2.44
3522 6335 4.100963 GGGATAGAAATGGCCGGAAATTTT 59.899 41.667 5.05 0.00 0.00 1.82
3523 6336 3.641436 GGGATAGAAATGGCCGGAAATTT 59.359 43.478 5.05 10.32 0.00 1.82
3524 6337 3.230976 GGGATAGAAATGGCCGGAAATT 58.769 45.455 5.05 0.00 0.00 1.82
3525 6338 2.490902 GGGGATAGAAATGGCCGGAAAT 60.491 50.000 5.05 0.00 0.00 2.17
3526 6339 1.133606 GGGGATAGAAATGGCCGGAAA 60.134 52.381 5.05 0.00 0.00 3.13
3527 6340 0.476771 GGGGATAGAAATGGCCGGAA 59.523 55.000 5.05 0.00 0.00 4.30
3531 6344 1.149101 TGGAGGGGATAGAAATGGCC 58.851 55.000 0.00 0.00 0.00 5.36
3549 6362 2.573462 TGAAGAGAGAGGGTGGGAAATG 59.427 50.000 0.00 0.00 0.00 2.32
3557 6370 0.324738 TGGCGATGAAGAGAGAGGGT 60.325 55.000 0.00 0.00 0.00 4.34
3558 6371 0.103937 GTGGCGATGAAGAGAGAGGG 59.896 60.000 0.00 0.00 0.00 4.30
3562 6375 1.396301 GCAAAGTGGCGATGAAGAGAG 59.604 52.381 0.00 0.00 0.00 3.20
3597 6410 9.614792 GTGAAGGGTAGAAATAGAATACACAAT 57.385 33.333 0.00 0.00 0.00 2.71
3598 6411 8.598916 TGTGAAGGGTAGAAATAGAATACACAA 58.401 33.333 0.00 0.00 0.00 3.33
3617 6430 0.181350 GCCCTAGGATGGTGTGAAGG 59.819 60.000 11.48 0.00 0.00 3.46
3625 6438 2.173356 TCAGAACATTGCCCTAGGATGG 59.827 50.000 11.48 0.00 0.00 3.51
3638 6451 4.713792 AGTTTGGAGAGGTTCAGAACAT 57.286 40.909 15.36 8.02 0.00 2.71
3669 6482 3.244840 GGCTGGAGATGCTAGATTTCCAT 60.245 47.826 11.99 0.00 37.32 3.41
3727 6540 1.699730 GGTAGAGGAGGAGGAGCTTC 58.300 60.000 0.00 0.00 0.00 3.86
3728 6541 0.106419 CGGTAGAGGAGGAGGAGCTT 60.106 60.000 0.00 0.00 0.00 3.74
3730 6543 0.820482 GACGGTAGAGGAGGAGGAGC 60.820 65.000 0.00 0.00 0.00 4.70
3731 6544 0.841289 AGACGGTAGAGGAGGAGGAG 59.159 60.000 0.00 0.00 0.00 3.69
3732 6545 0.838608 GAGACGGTAGAGGAGGAGGA 59.161 60.000 0.00 0.00 0.00 3.71
3733 6546 0.179012 GGAGACGGTAGAGGAGGAGG 60.179 65.000 0.00 0.00 0.00 4.30
3734 6547 0.547075 TGGAGACGGTAGAGGAGGAG 59.453 60.000 0.00 0.00 0.00 3.69
3735 6548 0.997363 TTGGAGACGGTAGAGGAGGA 59.003 55.000 0.00 0.00 0.00 3.71
3736 6549 1.104630 GTTGGAGACGGTAGAGGAGG 58.895 60.000 0.00 0.00 0.00 4.30
3737 6550 1.104630 GGTTGGAGACGGTAGAGGAG 58.895 60.000 0.00 0.00 0.00 3.69
3738 6551 0.406750 TGGTTGGAGACGGTAGAGGA 59.593 55.000 0.00 0.00 0.00 3.71
3739 6552 1.137086 CATGGTTGGAGACGGTAGAGG 59.863 57.143 0.00 0.00 0.00 3.69
3740 6553 2.099921 CTCATGGTTGGAGACGGTAGAG 59.900 54.545 0.00 0.00 34.24 2.43
3741 6554 2.100197 CTCATGGTTGGAGACGGTAGA 58.900 52.381 0.00 0.00 34.24 2.59
3742 6555 1.471676 GCTCATGGTTGGAGACGGTAG 60.472 57.143 0.00 0.00 34.24 3.18
3743 6556 0.535335 GCTCATGGTTGGAGACGGTA 59.465 55.000 0.00 0.00 34.24 4.02
3744 6557 1.194781 AGCTCATGGTTGGAGACGGT 61.195 55.000 0.00 0.00 34.24 4.83
3745 6558 0.460987 GAGCTCATGGTTGGAGACGG 60.461 60.000 9.40 0.00 34.24 4.79
3746 6559 0.460987 GGAGCTCATGGTTGGAGACG 60.461 60.000 17.19 0.00 34.24 4.18
3747 6560 0.908198 AGGAGCTCATGGTTGGAGAC 59.092 55.000 17.19 0.00 34.24 3.36
3748 6561 1.198713 GAGGAGCTCATGGTTGGAGA 58.801 55.000 17.19 0.00 34.24 3.71
3749 6562 0.179936 GGAGGAGCTCATGGTTGGAG 59.820 60.000 17.19 0.00 35.47 3.86
3750 6563 0.252881 AGGAGGAGCTCATGGTTGGA 60.253 55.000 17.19 0.00 31.08 3.53
3751 6564 0.179936 GAGGAGGAGCTCATGGTTGG 59.820 60.000 17.19 0.00 31.08 3.77
3752 6565 0.179936 GGAGGAGGAGCTCATGGTTG 59.820 60.000 17.19 0.00 31.08 3.77
3753 6566 0.043940 AGGAGGAGGAGCTCATGGTT 59.956 55.000 17.19 0.00 31.08 3.67
3754 6567 0.398381 GAGGAGGAGGAGCTCATGGT 60.398 60.000 17.19 0.00 31.08 3.55
3755 6568 0.105555 AGAGGAGGAGGAGCTCATGG 60.106 60.000 17.19 0.00 31.08 3.66
3756 6569 2.238521 GTAGAGGAGGAGGAGCTCATG 58.761 57.143 17.19 0.00 31.08 3.07
3757 6570 1.146982 GGTAGAGGAGGAGGAGCTCAT 59.853 57.143 17.19 8.81 31.08 2.90
3758 6571 0.553819 GGTAGAGGAGGAGGAGCTCA 59.446 60.000 17.19 0.00 31.08 4.26
3759 6572 0.536460 CGGTAGAGGAGGAGGAGCTC 60.536 65.000 4.71 4.71 0.00 4.09
3760 6573 1.283381 ACGGTAGAGGAGGAGGAGCT 61.283 60.000 0.00 0.00 0.00 4.09
3761 6574 0.820482 GACGGTAGAGGAGGAGGAGC 60.820 65.000 0.00 0.00 0.00 4.70
3762 6575 0.841289 AGACGGTAGAGGAGGAGGAG 59.159 60.000 0.00 0.00 0.00 3.69
3763 6576 0.838608 GAGACGGTAGAGGAGGAGGA 59.161 60.000 0.00 0.00 0.00 3.71
3764 6577 0.179012 GGAGACGGTAGAGGAGGAGG 60.179 65.000 0.00 0.00 0.00 4.30
3765 6578 0.547075 TGGAGACGGTAGAGGAGGAG 59.453 60.000 0.00 0.00 0.00 3.69
3766 6579 0.997363 TTGGAGACGGTAGAGGAGGA 59.003 55.000 0.00 0.00 0.00 3.71
3767 6580 1.104630 GTTGGAGACGGTAGAGGAGG 58.895 60.000 0.00 0.00 0.00 4.30
3768 6581 1.104630 GGTTGGAGACGGTAGAGGAG 58.895 60.000 0.00 0.00 0.00 3.69
3769 6582 0.324091 GGGTTGGAGACGGTAGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
3770 6583 1.664321 CGGGTTGGAGACGGTAGAGG 61.664 65.000 0.00 0.00 0.00 3.69
3771 6584 0.964358 ACGGGTTGGAGACGGTAGAG 60.964 60.000 0.00 0.00 0.00 2.43
3772 6585 0.540365 AACGGGTTGGAGACGGTAGA 60.540 55.000 0.00 0.00 0.00 2.59
3773 6586 0.108945 GAACGGGTTGGAGACGGTAG 60.109 60.000 0.00 0.00 0.00 3.18
3774 6587 1.865788 CGAACGGGTTGGAGACGGTA 61.866 60.000 0.00 0.00 0.00 4.02
3775 6588 2.739132 GAACGGGTTGGAGACGGT 59.261 61.111 0.00 0.00 0.00 4.83
3776 6589 2.431942 CGAACGGGTTGGAGACGG 60.432 66.667 0.00 0.00 0.00 4.79
3777 6590 3.110178 GCGAACGGGTTGGAGACG 61.110 66.667 0.00 0.00 0.00 4.18
3778 6591 2.741211 GGCGAACGGGTTGGAGAC 60.741 66.667 0.00 0.00 0.00 3.36
3779 6592 4.367023 CGGCGAACGGGTTGGAGA 62.367 66.667 0.00 0.00 39.42 3.71
3796 6609 3.756727 GAGGGTGACGTCGGGACC 61.757 72.222 13.73 13.73 35.25 4.46
3813 6626 1.209275 GGATGTTGAGATCGCGGACG 61.209 60.000 6.13 0.00 42.01 4.79
3814 6627 0.179111 TGGATGTTGAGATCGCGGAC 60.179 55.000 6.13 0.00 0.00 4.79
3815 6628 0.752658 ATGGATGTTGAGATCGCGGA 59.247 50.000 6.13 0.00 0.00 5.54
3816 6629 0.863799 CATGGATGTTGAGATCGCGG 59.136 55.000 6.13 0.00 0.00 6.46
3817 6630 1.791204 CTCATGGATGTTGAGATCGCG 59.209 52.381 0.00 0.00 42.63 5.87
3818 6631 1.530293 GCTCATGGATGTTGAGATCGC 59.470 52.381 4.93 0.00 42.63 4.58
3819 6632 1.791204 CGCTCATGGATGTTGAGATCG 59.209 52.381 4.93 0.00 42.63 3.69
3820 6633 1.530293 GCGCTCATGGATGTTGAGATC 59.470 52.381 0.00 0.00 42.63 2.75
3821 6634 1.590932 GCGCTCATGGATGTTGAGAT 58.409 50.000 0.00 0.00 42.63 2.75
3822 6635 0.807275 CGCGCTCATGGATGTTGAGA 60.807 55.000 5.56 0.00 42.63 3.27
3823 6636 1.086067 ACGCGCTCATGGATGTTGAG 61.086 55.000 5.73 0.00 42.83 3.02
3824 6637 1.079197 ACGCGCTCATGGATGTTGA 60.079 52.632 5.73 0.00 0.00 3.18
3825 6638 1.349627 GACGCGCTCATGGATGTTG 59.650 57.895 5.73 0.00 0.00 3.33
3826 6639 1.815421 GGACGCGCTCATGGATGTT 60.815 57.895 5.73 0.00 0.00 2.71
3827 6640 2.202932 GGACGCGCTCATGGATGT 60.203 61.111 5.73 0.00 0.00 3.06
3828 6641 2.969238 GGGACGCGCTCATGGATG 60.969 66.667 5.73 0.00 0.00 3.51
3839 6652 3.876589 TCAAGCTTGACCGGGACGC 62.877 63.158 25.16 0.50 41.20 5.19
3840 6653 2.342279 TCAAGCTTGACCGGGACG 59.658 61.111 25.16 0.00 41.89 4.79
3848 6661 0.465460 GGTGGTGTGGTCAAGCTTGA 60.465 55.000 25.16 25.16 34.20 3.02
3849 6662 1.785041 CGGTGGTGTGGTCAAGCTTG 61.785 60.000 20.81 20.81 0.00 4.01
3850 6663 1.525995 CGGTGGTGTGGTCAAGCTT 60.526 57.895 0.00 0.00 0.00 3.74
3851 6664 2.111043 CGGTGGTGTGGTCAAGCT 59.889 61.111 0.00 0.00 0.00 3.74
3852 6665 3.660111 GCGGTGGTGTGGTCAAGC 61.660 66.667 0.00 0.00 0.00 4.01
3853 6666 2.978010 GGCGGTGGTGTGGTCAAG 60.978 66.667 0.00 0.00 0.00 3.02
3854 6667 3.469863 GAGGCGGTGGTGTGGTCAA 62.470 63.158 0.00 0.00 0.00 3.18
3855 6668 3.936203 GAGGCGGTGGTGTGGTCA 61.936 66.667 0.00 0.00 0.00 4.02
3856 6669 4.699522 GGAGGCGGTGGTGTGGTC 62.700 72.222 0.00 0.00 0.00 4.02
3857 6670 3.839046 TAGGAGGCGGTGGTGTGGT 62.839 63.158 0.00 0.00 0.00 4.16
3858 6671 3.000819 TAGGAGGCGGTGGTGTGG 61.001 66.667 0.00 0.00 0.00 4.17
3859 6672 2.227089 GAGTAGGAGGCGGTGGTGTG 62.227 65.000 0.00 0.00 0.00 3.82
3860 6673 1.982938 GAGTAGGAGGCGGTGGTGT 60.983 63.158 0.00 0.00 0.00 4.16
3861 6674 2.722201 GGAGTAGGAGGCGGTGGTG 61.722 68.421 0.00 0.00 0.00 4.17
3862 6675 2.363925 GGAGTAGGAGGCGGTGGT 60.364 66.667 0.00 0.00 0.00 4.16
3863 6676 3.528370 CGGAGTAGGAGGCGGTGG 61.528 72.222 0.00 0.00 0.00 4.61
3864 6677 4.208686 GCGGAGTAGGAGGCGGTG 62.209 72.222 0.00 0.00 0.00 4.94
3868 6681 4.208686 CCACGCGGAGTAGGAGGC 62.209 72.222 12.47 0.00 0.00 4.70
3869 6682 2.005960 CTTCCACGCGGAGTAGGAGG 62.006 65.000 12.47 6.31 44.10 4.30
3870 6683 1.433879 CTTCCACGCGGAGTAGGAG 59.566 63.158 12.47 0.00 44.10 3.69
3871 6684 2.707849 GCTTCCACGCGGAGTAGGA 61.708 63.158 12.47 6.74 44.10 2.94
3872 6685 2.202756 GCTTCCACGCGGAGTAGG 60.203 66.667 12.47 4.13 44.10 3.18
3880 6693 2.363220 CGAAAAATATCGCTTCCACGC 58.637 47.619 0.00 0.00 35.85 5.34
3889 6702 3.594312 GGAACACGAGCGAAAAATATCG 58.406 45.455 0.00 0.00 45.41 2.92
3915 6728 1.079336 GTGGCCGTGAAGGAGGTAC 60.079 63.158 0.00 0.00 45.00 3.34
3916 6729 2.642254 CGTGGCCGTGAAGGAGGTA 61.642 63.158 0.00 0.00 45.00 3.08
3917 6730 4.003788 CGTGGCCGTGAAGGAGGT 62.004 66.667 0.00 0.00 45.00 3.85
3945 6758 4.498520 ATGAGCGCGGAGTCCACG 62.499 66.667 15.31 15.31 0.00 4.94
3946 6759 2.635229 ATCATGAGCGCGGAGTCCAC 62.635 60.000 8.83 0.00 0.00 4.02
3947 6760 2.355445 GATCATGAGCGCGGAGTCCA 62.355 60.000 8.83 0.00 0.00 4.02
3948 6761 1.663074 GATCATGAGCGCGGAGTCC 60.663 63.158 8.83 0.00 0.00 3.85
3949 6762 1.663074 GGATCATGAGCGCGGAGTC 60.663 63.158 8.83 0.00 0.00 3.36
3950 6763 2.419198 GGATCATGAGCGCGGAGT 59.581 61.111 8.83 0.00 0.00 3.85
3951 6764 1.953138 GTGGATCATGAGCGCGGAG 60.953 63.158 8.83 0.00 0.00 4.63
3952 6765 2.106938 GTGGATCATGAGCGCGGA 59.893 61.111 8.83 0.00 0.00 5.54
3953 6766 3.333189 CGTGGATCATGAGCGCGG 61.333 66.667 8.83 0.07 0.00 6.46
3954 6767 2.278792 TCGTGGATCATGAGCGCG 60.279 61.111 16.78 16.78 0.00 6.86
3955 6768 2.580470 CGTCGTGGATCATGAGCGC 61.580 63.158 4.63 0.00 29.40 5.92
3956 6769 0.932123 CTCGTCGTGGATCATGAGCG 60.932 60.000 4.63 5.27 29.40 5.03
3957 6770 0.596083 CCTCGTCGTGGATCATGAGC 60.596 60.000 7.59 1.26 29.40 4.26
3958 6771 1.001924 CTCCTCGTCGTGGATCATGAG 60.002 57.143 15.93 0.57 32.56 2.90
3959 6772 1.025041 CTCCTCGTCGTGGATCATGA 58.975 55.000 15.93 0.00 32.56 3.07
3960 6773 0.741326 ACTCCTCGTCGTGGATCATG 59.259 55.000 15.93 7.50 32.56 3.07
3961 6774 0.741326 CACTCCTCGTCGTGGATCAT 59.259 55.000 15.93 3.25 32.56 2.45
3962 6775 2.180674 CACTCCTCGTCGTGGATCA 58.819 57.895 15.93 0.00 32.56 2.92
3967 6780 0.741326 ATCATCCACTCCTCGTCGTG 59.259 55.000 0.00 0.00 0.00 4.35
3968 6781 1.025812 GATCATCCACTCCTCGTCGT 58.974 55.000 0.00 0.00 0.00 4.34
3969 6782 0.312416 GGATCATCCACTCCTCGTCG 59.688 60.000 0.00 0.00 36.28 5.12
3970 6783 1.611491 GAGGATCATCCACTCCTCGTC 59.389 57.143 6.42 0.00 45.93 4.20
3971 6784 1.698506 GAGGATCATCCACTCCTCGT 58.301 55.000 6.42 0.00 45.93 4.18
3974 6787 1.698506 GTCGAGGATCATCCACTCCT 58.301 55.000 6.42 0.00 44.67 3.69
3975 6788 0.312416 CGTCGAGGATCATCCACTCC 59.688 60.000 6.42 0.00 39.61 3.85
3976 6789 0.318275 GCGTCGAGGATCATCCACTC 60.318 60.000 6.42 0.00 39.61 3.51
3977 6790 1.736586 GCGTCGAGGATCATCCACT 59.263 57.895 6.42 0.00 39.61 4.00
3978 6791 1.300233 GGCGTCGAGGATCATCCAC 60.300 63.158 6.42 0.00 39.61 4.02
3979 6792 1.756561 TGGCGTCGAGGATCATCCA 60.757 57.895 6.42 3.26 39.61 3.41
3980 6793 1.300233 GTGGCGTCGAGGATCATCC 60.300 63.158 9.75 0.00 36.58 3.51
3981 6794 1.300233 GGTGGCGTCGAGGATCATC 60.300 63.158 9.75 0.00 33.17 2.92
3982 6795 1.402896 ATGGTGGCGTCGAGGATCAT 61.403 55.000 9.75 0.00 33.17 2.45
3983 6796 2.016393 GATGGTGGCGTCGAGGATCA 62.016 60.000 9.75 3.45 33.17 2.92
3984 6797 1.300233 GATGGTGGCGTCGAGGATC 60.300 63.158 9.75 0.00 0.00 3.36
3985 6798 1.402896 ATGATGGTGGCGTCGAGGAT 61.403 55.000 9.75 0.00 0.00 3.24
3986 6799 2.016393 GATGATGGTGGCGTCGAGGA 62.016 60.000 9.75 0.00 0.00 3.71
3987 6800 1.592669 GATGATGGTGGCGTCGAGG 60.593 63.158 0.00 0.00 0.00 4.63
3988 6801 1.592669 GGATGATGGTGGCGTCGAG 60.593 63.158 0.00 0.00 0.00 4.04
3989 6802 2.499205 GGATGATGGTGGCGTCGA 59.501 61.111 0.00 0.00 0.00 4.20
3990 6803 2.961721 CGGATGATGGTGGCGTCG 60.962 66.667 0.00 0.00 0.00 5.12
3991 6804 3.272334 GCGGATGATGGTGGCGTC 61.272 66.667 0.00 0.00 0.00 5.19
3992 6805 3.785859 AGCGGATGATGGTGGCGT 61.786 61.111 0.00 0.00 0.00 5.68
3993 6806 3.274586 CAGCGGATGATGGTGGCG 61.275 66.667 0.00 0.00 0.00 5.69
3994 6807 2.903855 CCAGCGGATGATGGTGGC 60.904 66.667 0.00 0.00 46.74 5.01
3999 6812 1.414181 AGGTAGAACCAGCGGATGATG 59.586 52.381 0.00 0.00 41.95 3.07
4000 6813 1.689273 GAGGTAGAACCAGCGGATGAT 59.311 52.381 0.00 0.00 41.95 2.45
4001 6814 1.112113 GAGGTAGAACCAGCGGATGA 58.888 55.000 0.00 0.00 41.95 2.92
4002 6815 0.824109 TGAGGTAGAACCAGCGGATG 59.176 55.000 0.00 0.00 41.95 3.51
4003 6816 0.824759 GTGAGGTAGAACCAGCGGAT 59.175 55.000 0.00 0.00 41.95 4.18
4004 6817 1.255667 GGTGAGGTAGAACCAGCGGA 61.256 60.000 0.00 0.00 41.95 5.54
4005 6818 1.218316 GGTGAGGTAGAACCAGCGG 59.782 63.158 0.00 0.00 41.95 5.52
4006 6819 1.972198 TGGTGAGGTAGAACCAGCG 59.028 57.895 0.00 0.00 41.56 5.18
4010 6823 2.432510 CTGGAGATGGTGAGGTAGAACC 59.567 54.545 0.00 0.00 38.99 3.62
4011 6824 2.159028 GCTGGAGATGGTGAGGTAGAAC 60.159 54.545 0.00 0.00 0.00 3.01
4012 6825 2.111384 GCTGGAGATGGTGAGGTAGAA 58.889 52.381 0.00 0.00 0.00 2.10
4013 6826 1.781786 GCTGGAGATGGTGAGGTAGA 58.218 55.000 0.00 0.00 0.00 2.59
4014 6827 0.387202 CGCTGGAGATGGTGAGGTAG 59.613 60.000 0.00 0.00 0.00 3.18
4015 6828 0.033503 TCGCTGGAGATGGTGAGGTA 60.034 55.000 0.00 0.00 0.00 3.08
4016 6829 1.305297 TCGCTGGAGATGGTGAGGT 60.305 57.895 0.00 0.00 0.00 3.85
4017 6830 1.142748 GTCGCTGGAGATGGTGAGG 59.857 63.158 0.00 0.00 0.00 3.86
4018 6831 0.463204 ATGTCGCTGGAGATGGTGAG 59.537 55.000 0.00 0.00 0.00 3.51
4019 6832 0.461548 GATGTCGCTGGAGATGGTGA 59.538 55.000 0.00 0.00 0.00 4.02
4020 6833 0.463204 AGATGTCGCTGGAGATGGTG 59.537 55.000 0.00 0.00 0.00 4.17
4021 6834 1.137872 GAAGATGTCGCTGGAGATGGT 59.862 52.381 0.00 0.00 0.00 3.55
4022 6835 1.539929 GGAAGATGTCGCTGGAGATGG 60.540 57.143 0.00 0.00 0.00 3.51
4023 6836 1.137675 TGGAAGATGTCGCTGGAGATG 59.862 52.381 0.00 0.00 0.00 2.90
4024 6837 1.137872 GTGGAAGATGTCGCTGGAGAT 59.862 52.381 0.00 0.00 0.00 2.75
4025 6838 0.532573 GTGGAAGATGTCGCTGGAGA 59.467 55.000 0.00 0.00 0.00 3.71
4026 6839 0.247460 TGTGGAAGATGTCGCTGGAG 59.753 55.000 0.00 0.00 0.00 3.86
4027 6840 0.037326 GTGTGGAAGATGTCGCTGGA 60.037 55.000 0.00 0.00 0.00 3.86
4028 6841 1.021390 GGTGTGGAAGATGTCGCTGG 61.021 60.000 0.00 0.00 0.00 4.85
4029 6842 1.354337 CGGTGTGGAAGATGTCGCTG 61.354 60.000 0.00 0.00 0.00 5.18
4030 6843 1.079819 CGGTGTGGAAGATGTCGCT 60.080 57.895 0.00 0.00 0.00 4.93
4031 6844 1.374252 ACGGTGTGGAAGATGTCGC 60.374 57.895 0.00 0.00 0.00 5.19
4032 6845 2.445274 CACGGTGTGGAAGATGTCG 58.555 57.895 0.00 0.00 0.00 4.35
4048 6861 1.728426 CGTCCTCGTCGTTCACCAC 60.728 63.158 0.00 0.00 0.00 4.16
4049 6862 2.640989 CGTCCTCGTCGTTCACCA 59.359 61.111 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.