Multiple sequence alignment - TraesCS7A01G503100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G503100 chr7A 100.000 3894 0 0 1 3894 692057497 692053604 0.000000e+00 7191.0
1 TraesCS7A01G503100 chr7A 85.125 679 78 16 993 1653 712307096 712307769 0.000000e+00 673.0
2 TraesCS7A01G503100 chr7A 81.108 704 86 30 994 1653 116018877 116019577 1.600000e-143 520.0
3 TraesCS7A01G503100 chr7A 86.005 443 33 16 672 1100 692131276 692130849 7.670000e-122 448.0
4 TraesCS7A01G503100 chr7A 80.693 202 17 18 2095 2285 692154797 692154607 1.890000e-28 137.0
5 TraesCS7A01G503100 chr7A 94.444 54 3 0 1933 1986 80295298 80295351 2.490000e-12 84.2
6 TraesCS7A01G503100 chr7B 88.200 1322 97 20 2414 3687 679682804 679681494 0.000000e+00 1522.0
7 TraesCS7A01G503100 chr7B 81.719 1838 201 76 3 1750 679685166 679683374 0.000000e+00 1408.0
8 TraesCS7A01G503100 chr7B 85.441 680 74 16 993 1653 713099495 713100168 0.000000e+00 684.0
9 TraesCS7A01G503100 chr7B 84.629 553 47 18 1822 2370 679683337 679682819 2.070000e-142 516.0
10 TraesCS7A01G503100 chr7B 84.106 453 34 16 672 1100 679713692 679713254 1.680000e-108 403.0
11 TraesCS7A01G503100 chr7B 87.085 271 32 3 1118 1385 679713191 679712921 1.760000e-78 303.0
12 TraesCS7A01G503100 chr7B 81.250 240 38 6 1748 1986 350936526 350936293 1.850000e-43 187.0
13 TraesCS7A01G503100 chr7D 86.156 679 71 16 993 1653 618679623 618680296 0.000000e+00 712.0
14 TraesCS7A01G503100 chr7D 81.108 704 86 31 994 1653 110890671 110891371 1.600000e-143 520.0
15 TraesCS7A01G503100 chr7D 88.610 439 28 9 672 1100 599885149 599884723 7.460000e-142 514.0
16 TraesCS7A01G503100 chr7D 86.716 271 33 3 1118 1385 599884659 599884389 8.180000e-77 298.0
17 TraesCS7A01G503100 chr7D 85.417 240 27 5 2436 2673 599888899 599888666 3.890000e-60 243.0
18 TraesCS7A01G503100 chr7D 79.396 364 47 15 2493 2832 110891889 110892248 8.410000e-57 231.0
19 TraesCS7A01G503100 chr7D 81.188 202 16 16 2095 2285 599889331 599889141 4.060000e-30 143.0
20 TraesCS7A01G503100 chr1B 83.655 673 71 23 995 1652 608996442 608995794 7.200000e-167 597.0
21 TraesCS7A01G503100 chr1D 86.640 509 47 10 1152 1652 445642529 445642034 9.520000e-151 544.0
22 TraesCS7A01G503100 chr1D 88.983 118 12 1 995 1111 445642722 445642605 1.130000e-30 145.0
23 TraesCS7A01G503100 chr1A 85.658 509 48 12 1152 1652 541895513 541895022 2.680000e-141 512.0
24 TraesCS7A01G503100 chr1A 75.905 718 105 36 2226 2931 541894529 541893868 4.890000e-79 305.0
25 TraesCS7A01G503100 chr1A 90.476 105 10 0 995 1099 541895713 541895609 5.250000e-29 139.0
26 TraesCS7A01G503100 chrUn 83.915 516 59 15 1161 1653 266170971 266170457 4.550000e-129 472.0
27 TraesCS7A01G503100 chrUn 78.881 715 94 40 994 1653 366813976 366813264 7.730000e-117 431.0
28 TraesCS7A01G503100 chrUn 78.363 721 96 40 991 1653 272511729 272512447 2.800000e-111 412.0
29 TraesCS7A01G503100 chrUn 76.749 443 62 23 2493 2904 16613622 16614054 3.940000e-50 209.0
30 TraesCS7A01G503100 chrUn 76.802 444 60 21 2493 2904 272512954 272513386 3.940000e-50 209.0
31 TraesCS7A01G503100 chrUn 76.802 444 60 21 2493 2904 288702079 288702511 3.940000e-50 209.0
32 TraesCS7A01G503100 chrUn 76.577 444 61 21 2493 2904 16658781 16659213 1.830000e-48 204.0
33 TraesCS7A01G503100 chrUn 88.991 109 10 2 994 1100 16444224 16444116 2.440000e-27 134.0
34 TraesCS7A01G503100 chr2D 83.915 516 59 15 1161 1653 15228957 15229471 4.550000e-129 472.0
35 TraesCS7A01G503100 chr2D 83.721 516 60 16 1161 1653 15264668 15265182 2.120000e-127 466.0
36 TraesCS7A01G503100 chr2D 77.045 440 66 18 2493 2904 19848138 19847706 1.820000e-53 220.0
37 TraesCS7A01G503100 chr2D 83.824 204 28 5 1757 1960 148970195 148969997 5.140000e-44 189.0
38 TraesCS7A01G503100 chr6B 84.120 233 33 3 1748 1980 244954706 244954478 5.060000e-54 222.0
39 TraesCS7A01G503100 chr5D 83.682 239 35 4 1748 1986 557779024 557778790 5.060000e-54 222.0
40 TraesCS7A01G503100 chr2A 77.315 432 61 21 2493 2895 20366616 20367039 1.820000e-53 220.0
41 TraesCS7A01G503100 chr2A 83.406 229 32 6 1758 1986 702943910 702943688 1.420000e-49 207.0
42 TraesCS7A01G503100 chr5B 82.422 256 40 4 1748 2003 439612483 439612233 6.550000e-53 219.0
43 TraesCS7A01G503100 chr5B 81.277 235 36 6 1748 1980 35330398 35330170 2.390000e-42 183.0
44 TraesCS7A01G503100 chr3A 83.262 233 35 4 1748 1980 279554503 279554731 1.100000e-50 211.0
45 TraesCS7A01G503100 chr3B 82.379 227 32 8 1748 1972 92585347 92585567 1.430000e-44 191.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G503100 chr7A 692053604 692057497 3893 True 7191.000000 7191 100.000000 1 3894 1 chr7A.!!$R1 3893
1 TraesCS7A01G503100 chr7A 712307096 712307769 673 False 673.000000 673 85.125000 993 1653 1 chr7A.!!$F3 660
2 TraesCS7A01G503100 chr7A 116018877 116019577 700 False 520.000000 520 81.108000 994 1653 1 chr7A.!!$F2 659
3 TraesCS7A01G503100 chr7B 679681494 679685166 3672 True 1148.666667 1522 84.849333 3 3687 3 chr7B.!!$R2 3684
4 TraesCS7A01G503100 chr7B 713099495 713100168 673 False 684.000000 684 85.441000 993 1653 1 chr7B.!!$F1 660
5 TraesCS7A01G503100 chr7B 679712921 679713692 771 True 353.000000 403 85.595500 672 1385 2 chr7B.!!$R3 713
6 TraesCS7A01G503100 chr7D 618679623 618680296 673 False 712.000000 712 86.156000 993 1653 1 chr7D.!!$F1 660
7 TraesCS7A01G503100 chr7D 110890671 110892248 1577 False 375.500000 520 80.252000 994 2832 2 chr7D.!!$F2 1838
8 TraesCS7A01G503100 chr7D 599884389 599889331 4942 True 299.500000 514 85.482750 672 2673 4 chr7D.!!$R1 2001
9 TraesCS7A01G503100 chr1B 608995794 608996442 648 True 597.000000 597 83.655000 995 1652 1 chr1B.!!$R1 657
10 TraesCS7A01G503100 chr1D 445642034 445642722 688 True 344.500000 544 87.811500 995 1652 2 chr1D.!!$R1 657
11 TraesCS7A01G503100 chr1A 541893868 541895713 1845 True 318.666667 512 84.013000 995 2931 3 chr1A.!!$R1 1936
12 TraesCS7A01G503100 chrUn 266170457 266170971 514 True 472.000000 472 83.915000 1161 1653 1 chrUn.!!$R2 492
13 TraesCS7A01G503100 chrUn 366813264 366813976 712 True 431.000000 431 78.881000 994 1653 1 chrUn.!!$R3 659
14 TraesCS7A01G503100 chrUn 272511729 272513386 1657 False 310.500000 412 77.582500 991 2904 2 chrUn.!!$F4 1913
15 TraesCS7A01G503100 chr2D 15228957 15229471 514 False 472.000000 472 83.915000 1161 1653 1 chr2D.!!$F1 492
16 TraesCS7A01G503100 chr2D 15264668 15265182 514 False 466.000000 466 83.721000 1161 1653 1 chr2D.!!$F2 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 240 0.107459 GGATTCAGTGGTCCTGGAGC 60.107 60.0 18.72 18.72 41.83 4.70 F
1197 4820 0.106318 GGATCTGCAAGGCCAAGGAT 60.106 55.0 5.01 0.57 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2171 6121 0.105142 ATCCCCTAGGTACCGCACAT 60.105 55.0 8.29 0.0 0.00 3.21 R
2998 7106 0.041839 CACACTTGCTGAAGCGTCAC 60.042 55.0 0.00 0.0 45.83 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.053896 GTGTACCCACCGCCAAGC 61.054 66.667 0.00 0.00 35.44 4.01
44 45 3.578688 CACTGAAATTAAGCTTGGCACC 58.421 45.455 9.86 0.00 0.00 5.01
48 49 4.630111 TGAAATTAAGCTTGGCACCTTTG 58.370 39.130 9.86 0.00 0.00 2.77
49 50 4.343526 TGAAATTAAGCTTGGCACCTTTGA 59.656 37.500 9.86 0.00 0.00 2.69
50 51 4.525912 AATTAAGCTTGGCACCTTTGAG 57.474 40.909 9.86 0.00 0.00 3.02
51 52 1.909700 TAAGCTTGGCACCTTTGAGG 58.090 50.000 9.86 0.00 42.49 3.86
60 66 1.956477 GCACCTTTGAGGAAGCTCAAA 59.044 47.619 0.00 0.00 46.99 2.69
89 95 7.989826 ACTATCAAGAATATGCAAAGTTCCAC 58.010 34.615 0.00 0.00 0.00 4.02
110 116 3.945285 ACGGGTTCTCAATTCGCATAAAT 59.055 39.130 0.00 0.00 0.00 1.40
118 124 3.563390 TCAATTCGCATAAATCATCGCCA 59.437 39.130 0.00 0.00 0.00 5.69
122 128 3.690422 TCGCATAAATCATCGCCAAAAC 58.310 40.909 0.00 0.00 0.00 2.43
141 147 1.541310 CGTCAAGCCAGGGGAGTACA 61.541 60.000 0.00 0.00 0.00 2.90
143 149 1.078143 CAAGCCAGGGGAGTACAGC 60.078 63.158 0.00 0.00 0.00 4.40
170 176 3.722123 CGAGCTAAAGTGCTACAAAACG 58.278 45.455 0.00 0.00 44.17 3.60
191 197 1.243902 GGGGAAACAAGAACGATGCA 58.756 50.000 0.00 0.00 0.00 3.96
197 203 4.564769 GGAAACAAGAACGATGCAAACAAA 59.435 37.500 0.00 0.00 0.00 2.83
199 205 5.701029 AACAAGAACGATGCAAACAAAAG 57.299 34.783 0.00 0.00 0.00 2.27
220 226 8.826710 CAAAAGAAAAACTAACAAAGGGGATTC 58.173 33.333 0.00 0.00 0.00 2.52
224 230 6.405278 AAAACTAACAAAGGGGATTCAGTG 57.595 37.500 0.00 0.00 0.00 3.66
230 236 0.995024 AAGGGGATTCAGTGGTCCTG 59.005 55.000 13.09 0.00 42.97 3.86
234 240 0.107459 GGATTCAGTGGTCCTGGAGC 60.107 60.000 18.72 18.72 41.83 4.70
246 252 2.668212 TGGAGCGCAAAAGGACCG 60.668 61.111 11.47 0.00 0.00 4.79
250 256 2.479198 GCGCAAAAGGACCGCTAC 59.521 61.111 0.30 0.00 43.95 3.58
254 260 1.079503 GCAAAAGGACCGCTACAGAG 58.920 55.000 0.00 0.00 0.00 3.35
256 262 1.275291 CAAAAGGACCGCTACAGAGGA 59.725 52.381 5.98 0.00 38.45 3.71
257 263 1.187087 AAAGGACCGCTACAGAGGAG 58.813 55.000 5.98 0.00 38.45 3.69
259 265 0.394625 AGGACCGCTACAGAGGAGAC 60.395 60.000 5.98 0.00 38.45 3.36
320 336 6.904463 AAAAAGCTACCGGAAATCCTTTAA 57.096 33.333 9.46 0.00 0.00 1.52
321 337 6.904463 AAAAGCTACCGGAAATCCTTTAAA 57.096 33.333 9.46 0.00 0.00 1.52
323 339 6.904463 AAGCTACCGGAAATCCTTTAAAAA 57.096 33.333 9.46 0.00 0.00 1.94
389 413 7.686438 TTTTCTTGATAGACTAGCAAATGCA 57.314 32.000 13.77 0.00 45.16 3.96
393 417 6.704937 TCTTGATAGACTAGCAAATGCATCTG 59.295 38.462 13.77 0.00 45.16 2.90
416 465 5.475564 TGTGTCACACTGCTAGTAACATAGA 59.524 40.000 9.90 0.00 35.11 1.98
451 500 6.190954 AGTTGAGTGAAAGTACAAAACACC 57.809 37.500 0.00 0.00 32.76 4.16
518 567 2.743636 TCTAGCTTCTTGGACAACCG 57.256 50.000 0.00 0.00 39.42 4.44
524 573 2.098443 GCTTCTTGGACAACCGAACAAA 59.902 45.455 0.00 0.00 39.42 2.83
525 574 3.691498 CTTCTTGGACAACCGAACAAAC 58.309 45.455 0.00 0.00 39.42 2.93
526 575 2.018515 TCTTGGACAACCGAACAAACC 58.981 47.619 0.00 0.00 39.42 3.27
527 576 1.746220 CTTGGACAACCGAACAAACCA 59.254 47.619 0.00 0.00 39.42 3.67
528 577 1.384525 TGGACAACCGAACAAACCAG 58.615 50.000 0.00 0.00 39.42 4.00
529 578 1.065345 TGGACAACCGAACAAACCAGA 60.065 47.619 0.00 0.00 39.42 3.86
530 579 2.227194 GGACAACCGAACAAACCAGAT 58.773 47.619 0.00 0.00 0.00 2.90
531 580 2.031157 GGACAACCGAACAAACCAGATG 60.031 50.000 0.00 0.00 0.00 2.90
532 581 1.336755 ACAACCGAACAAACCAGATGC 59.663 47.619 0.00 0.00 0.00 3.91
533 582 1.608590 CAACCGAACAAACCAGATGCT 59.391 47.619 0.00 0.00 0.00 3.79
535 584 2.306847 ACCGAACAAACCAGATGCTTT 58.693 42.857 0.00 0.00 0.00 3.51
546 595 3.512724 ACCAGATGCTTTGCTTATTTGCT 59.487 39.130 0.00 0.00 0.00 3.91
552 601 3.250521 TGCTTTGCTTATTTGCTTTTGCC 59.749 39.130 0.00 0.00 46.87 4.52
557 606 6.448207 TTGCTTATTTGCTTTTGCCTTTTT 57.552 29.167 0.00 0.00 46.87 1.94
582 631 4.223700 TCTGCTGTCTTTCCACATCTATGT 59.776 41.667 0.00 0.00 42.84 2.29
586 635 5.412594 GCTGTCTTTCCACATCTATGTCAAA 59.587 40.000 0.00 0.00 39.39 2.69
606 677 3.541996 ATCGTACATCCTTGTGCATCA 57.458 42.857 0.00 0.00 38.26 3.07
607 678 2.616960 TCGTACATCCTTGTGCATCAC 58.383 47.619 0.00 0.00 38.26 3.06
611 684 4.083324 CGTACATCCTTGTGCATCACTTTT 60.083 41.667 0.00 0.00 38.26 2.27
640 715 5.104360 GGGCCTTGCATTCATCTATCCTATA 60.104 44.000 0.84 0.00 0.00 1.31
662 737 5.643379 ATTTATTCGGTGTCTTGCAATGT 57.357 34.783 0.00 0.00 0.00 2.71
682 4194 5.092554 TGTCATGTTATTGGTACGGATGT 57.907 39.130 0.00 0.00 0.00 3.06
724 4240 2.555547 GCGGAGGTTATGCATGCCC 61.556 63.158 16.68 9.06 0.00 5.36
750 4266 2.897326 TGTTCTCTCAGTTTCCCGATCA 59.103 45.455 0.00 0.00 0.00 2.92
780 4296 2.554272 GCGCACGTTACACCCAAG 59.446 61.111 0.30 0.00 0.00 3.61
782 4298 1.595929 CGCACGTTACACCCAAGGT 60.596 57.895 0.00 0.00 35.62 3.50
783 4299 0.319727 CGCACGTTACACCCAAGGTA 60.320 55.000 0.00 0.00 32.11 3.08
785 4301 1.735571 GCACGTTACACCCAAGGTATG 59.264 52.381 0.00 0.00 32.11 2.39
786 4302 2.613474 GCACGTTACACCCAAGGTATGA 60.613 50.000 0.00 0.00 32.11 2.15
787 4303 3.869065 CACGTTACACCCAAGGTATGAT 58.131 45.455 0.00 0.00 32.11 2.45
862 4393 7.418712 CCAGTCTAACTAACCATTAACCCCTAG 60.419 44.444 0.00 0.00 0.00 3.02
917 4448 1.522806 CCCGCCACGCAATAAGCTA 60.523 57.895 0.00 0.00 42.61 3.32
1089 4624 1.075450 CTCCCCTACGTAAGCCCCT 60.075 63.158 0.00 0.00 45.62 4.79
1116 4712 4.388499 TCCTCCGCGGCCTTTGTC 62.388 66.667 23.51 0.00 0.00 3.18
1127 4723 1.527433 GCCTTTGTCTGGAAGGTGGC 61.527 60.000 4.95 0.00 44.44 5.01
1134 4730 4.329545 TGGAAGGTGGCTGTCGGC 62.330 66.667 0.00 0.00 40.90 5.54
1142 4758 1.453015 TGGCTGTCGGCAACTTGTT 60.453 52.632 5.89 0.00 43.40 2.83
1154 4770 4.263139 GCAACTTGTTTCTTTTGCCTTG 57.737 40.909 0.00 0.00 38.74 3.61
1155 4771 3.485711 GCAACTTGTTTCTTTTGCCTTGC 60.486 43.478 0.00 0.00 38.74 4.01
1176 4799 1.241315 GGTGCAGGCCAACGTTATGT 61.241 55.000 5.01 0.00 0.00 2.29
1197 4820 0.106318 GGATCTGCAAGGCCAAGGAT 60.106 55.000 5.01 0.57 0.00 3.24
1227 4850 2.365237 AAGCCGGACCCCTACCTC 60.365 66.667 5.05 0.00 0.00 3.85
1301 4924 2.456119 CCAACAGCATCCTCGTCGC 61.456 63.158 0.00 0.00 0.00 5.19
1356 4979 3.005897 GCGCCTACCTCATCATCTTCTTA 59.994 47.826 0.00 0.00 0.00 2.10
1407 5050 6.566197 CGTACTACGTCCCTCCTAATTAAT 57.434 41.667 0.00 0.00 36.74 1.40
1414 5057 4.565652 CGTCCCTCCTAATTAATCCCCATG 60.566 50.000 0.00 0.00 0.00 3.66
1428 5071 1.142667 CCCCATGGCTTGTTGGTTTTT 59.857 47.619 6.09 0.00 0.00 1.94
1431 5074 3.181461 CCCATGGCTTGTTGGTTTTTGTA 60.181 43.478 6.09 0.00 0.00 2.41
1466 5136 4.539939 GGCCCTAACCCATGCCCC 62.540 72.222 0.00 0.00 37.94 5.80
1529 5212 1.302511 GAGGCGGTGTTCATGGTGT 60.303 57.895 0.00 0.00 0.00 4.16
1538 5221 1.147153 TTCATGGTGTGCGTGGTGA 59.853 52.632 0.00 0.00 0.00 4.02
1668 5351 9.261180 CATGGTACGTAAAATGATGATCTACTT 57.739 33.333 11.54 0.00 0.00 2.24
1692 5441 3.603965 TTAATTGGTGGGAGGTGTTGT 57.396 42.857 0.00 0.00 0.00 3.32
1721 5470 9.515020 TTTTGTAGAGTTTTATTTTGCACTCAG 57.485 29.630 0.00 0.00 38.53 3.35
1723 5472 8.220755 TGTAGAGTTTTATTTTGCACTCAGTT 57.779 30.769 0.00 0.00 38.53 3.16
1742 5491 3.257624 AGTTAGTAGTTGCGTGTTAGGCT 59.742 43.478 0.00 0.00 0.00 4.58
1745 5494 2.094338 AGTAGTTGCGTGTTAGGCTACC 60.094 50.000 0.00 0.00 35.85 3.18
1754 5512 3.503363 CGTGTTAGGCTACCCGTATCATA 59.497 47.826 0.00 0.00 35.76 2.15
1755 5513 4.157289 CGTGTTAGGCTACCCGTATCATAT 59.843 45.833 0.00 0.00 35.76 1.78
1771 5529 8.355913 CCGTATCATATCTAGTATCATGCATGT 58.644 37.037 25.43 15.34 0.00 3.21
1776 5534 8.587608 TCATATCTAGTATCATGCATGTCAACA 58.412 33.333 25.43 7.04 0.00 3.33
1777 5535 9.211485 CATATCTAGTATCATGCATGTCAACAA 57.789 33.333 25.43 6.27 0.00 2.83
1778 5536 7.725818 ATCTAGTATCATGCATGTCAACAAG 57.274 36.000 25.43 16.20 0.00 3.16
1779 5537 6.051074 TCTAGTATCATGCATGTCAACAAGG 58.949 40.000 25.43 14.35 0.00 3.61
1780 5538 2.953466 ATCATGCATGTCAACAAGGC 57.047 45.000 25.43 3.91 0.00 4.35
1781 5539 1.618487 TCATGCATGTCAACAAGGCA 58.382 45.000 25.43 13.07 41.89 4.75
1782 5540 1.962100 TCATGCATGTCAACAAGGCAA 59.038 42.857 25.43 0.00 41.33 4.52
1783 5541 2.563620 TCATGCATGTCAACAAGGCAAT 59.436 40.909 25.43 4.21 41.33 3.56
1786 5544 3.806380 TGCATGTCAACAAGGCAATTTT 58.194 36.364 9.53 0.00 37.31 1.82
1796 5554 3.450457 ACAAGGCAATTTTGTTGAGGTGA 59.550 39.130 0.00 0.00 35.32 4.02
1798 5556 3.030291 AGGCAATTTTGTTGAGGTGACA 58.970 40.909 0.00 0.00 0.00 3.58
1799 5557 3.642848 AGGCAATTTTGTTGAGGTGACAT 59.357 39.130 0.00 0.00 0.00 3.06
1801 5559 5.304101 AGGCAATTTTGTTGAGGTGACATAA 59.696 36.000 0.00 0.00 0.00 1.90
1802 5560 5.988561 GGCAATTTTGTTGAGGTGACATAAA 59.011 36.000 0.00 0.00 0.00 1.40
2026 5949 3.010420 GGCTAACCAACATTGTCCTCTC 58.990 50.000 0.00 0.00 35.26 3.20
2030 5953 4.993705 AACCAACATTGTCCTCTCCTTA 57.006 40.909 0.00 0.00 0.00 2.69
2031 5954 5.520748 AACCAACATTGTCCTCTCCTTAT 57.479 39.130 0.00 0.00 0.00 1.73
2032 5955 4.848357 ACCAACATTGTCCTCTCCTTATG 58.152 43.478 0.00 0.00 0.00 1.90
2033 5956 4.202441 CCAACATTGTCCTCTCCTTATGG 58.798 47.826 0.00 0.00 0.00 2.74
2034 5957 4.080356 CCAACATTGTCCTCTCCTTATGGA 60.080 45.833 0.00 0.00 40.69 3.41
2035 5958 5.500234 CAACATTGTCCTCTCCTTATGGAA 58.500 41.667 0.00 0.00 42.66 3.53
2044 5967 5.964477 TCCTCTCCTTATGGAATGTACTTGT 59.036 40.000 0.00 0.00 42.66 3.16
2046 5969 7.287927 TCCTCTCCTTATGGAATGTACTTGTAG 59.712 40.741 0.00 0.00 42.66 2.74
2061 5984 0.949397 TGTAGTCCGTATGGCTAGCG 59.051 55.000 9.00 0.00 34.14 4.26
2062 5985 0.386985 GTAGTCCGTATGGCTAGCGC 60.387 60.000 9.00 0.00 34.14 5.92
2063 5986 0.536687 TAGTCCGTATGGCTAGCGCT 60.537 55.000 17.26 17.26 36.09 5.92
2064 5987 0.536687 AGTCCGTATGGCTAGCGCTA 60.537 55.000 17.75 17.75 36.09 4.26
2065 5988 0.109689 GTCCGTATGGCTAGCGCTAG 60.110 60.000 34.98 34.98 36.09 3.42
2113 6040 2.670229 CGCCAAACTCTCGTGTTAGCTA 60.670 50.000 0.00 0.00 31.36 3.32
2169 6119 2.984562 TCCAGCGCTTCATCACAAATA 58.015 42.857 7.50 0.00 0.00 1.40
2171 6121 4.702831 TCCAGCGCTTCATCACAAATATA 58.297 39.130 7.50 0.00 0.00 0.86
2194 6144 1.692173 GCGGTACCTAGGGGATGCAA 61.692 60.000 14.81 0.00 36.25 4.08
2222 6172 7.877097 GCATGGAGATATAGATCATATGTTCCC 59.123 40.741 9.68 3.87 33.13 3.97
2223 6173 8.931568 CATGGAGATATAGATCATATGTTCCCA 58.068 37.037 9.68 8.53 33.13 4.37
2276 6226 3.330701 TCCCTTTTGCCAACTCTATGAGT 59.669 43.478 0.00 0.00 45.64 3.41
2316 6266 6.657836 TCGAAATCGAAGAAAAAGGATACC 57.342 37.500 2.51 0.00 46.30 2.73
2341 6291 0.696501 AGCCACTAACATCGGGGTTT 59.303 50.000 0.00 0.00 32.29 3.27
2363 6313 1.823899 GAATCCCGTGGGTCATGCC 60.824 63.158 4.53 0.00 36.47 4.40
2364 6314 2.270874 GAATCCCGTGGGTCATGCCT 62.271 60.000 4.53 0.00 37.43 4.75
2382 6332 2.772515 GCCTTCTAGGTGTAGGGTTCAT 59.227 50.000 0.00 0.00 37.80 2.57
2384 6334 4.290942 CCTTCTAGGTGTAGGGTTCATCT 58.709 47.826 0.00 0.00 30.55 2.90
2385 6335 4.717280 CCTTCTAGGTGTAGGGTTCATCTT 59.283 45.833 0.00 0.00 30.55 2.40
2387 6337 5.677319 TCTAGGTGTAGGGTTCATCTTTG 57.323 43.478 0.00 0.00 0.00 2.77
2402 6355 7.538678 GGTTCATCTTTGTACTGCTGTTAATTG 59.461 37.037 0.09 0.00 0.00 2.32
2403 6356 7.977789 TCATCTTTGTACTGCTGTTAATTGA 57.022 32.000 0.09 0.00 0.00 2.57
2407 6360 6.714810 TCTTTGTACTGCTGTTAATTGACCAT 59.285 34.615 0.09 0.00 0.00 3.55
2408 6361 5.878332 TGTACTGCTGTTAATTGACCATG 57.122 39.130 0.09 0.00 0.00 3.66
2430 6384 8.472413 CCATGGAATTTGTTTACTCATCATCTT 58.528 33.333 5.56 0.00 0.00 2.40
2468 6497 1.537202 GACTTGGCCTTGTGCTTGTAG 59.463 52.381 3.32 0.00 40.92 2.74
2487 6517 9.922305 GCTTGTAGCAAATTATGAAAGTACTAG 57.078 33.333 0.00 0.00 41.89 2.57
2583 6648 2.440409 CTGGTGAACTTCCTCAATGGG 58.560 52.381 0.00 0.00 36.20 4.00
2625 6690 4.793071 CGCTCATCAAGTTCGATCTCTAT 58.207 43.478 0.00 0.00 0.00 1.98
2628 6693 6.566753 CGCTCATCAAGTTCGATCTCTATGTA 60.567 42.308 13.51 5.06 0.00 2.29
2656 6727 6.216569 GTCAGTACATACATACACATCCCAG 58.783 44.000 0.00 0.00 0.00 4.45
2661 6732 5.126067 ACATACATACACATCCCAGAAAGC 58.874 41.667 0.00 0.00 0.00 3.51
2665 6736 1.067295 ACACATCCCAGAAAGCTCCA 58.933 50.000 0.00 0.00 0.00 3.86
2668 6740 2.229784 CACATCCCAGAAAGCTCCAAAC 59.770 50.000 0.00 0.00 0.00 2.93
2682 6759 3.747708 GCTCCAAACCCAGACTTACACTT 60.748 47.826 0.00 0.00 0.00 3.16
2688 6780 4.634012 ACCCAGACTTACACTTTGCATA 57.366 40.909 0.00 0.00 0.00 3.14
2697 6789 9.757227 AGACTTACACTTTGCATAGATCTAATC 57.243 33.333 11.39 2.26 0.00 1.75
2703 6795 9.182214 ACACTTTGCATAGATCTAATCAATTGT 57.818 29.630 11.39 14.52 0.00 2.71
2704 6796 9.447040 CACTTTGCATAGATCTAATCAATTGTG 57.553 33.333 21.61 21.61 0.00 3.33
2705 6797 8.627403 ACTTTGCATAGATCTAATCAATTGTGG 58.373 33.333 11.39 5.40 0.00 4.17
2708 6800 6.016860 TGCATAGATCTAATCAATTGTGGTGC 60.017 38.462 6.52 7.93 0.00 5.01
2719 6827 5.596845 TCAATTGTGGTGCCTTCTTTTAAC 58.403 37.500 5.13 0.00 0.00 2.01
2832 6940 0.179067 AAGAACGTCGAACTGCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
2850 6958 2.545532 CCAACGCCATCAACAACAACAT 60.546 45.455 0.00 0.00 0.00 2.71
2856 6964 3.500982 CCATCAACAACAACATTAGCGG 58.499 45.455 0.00 0.00 0.00 5.52
2857 6965 3.190327 CCATCAACAACAACATTAGCGGA 59.810 43.478 0.00 0.00 0.00 5.54
2865 6973 4.585526 CATTAGCGGAGGCGGCGA 62.586 66.667 12.98 0.00 46.35 5.54
2866 6974 3.616721 ATTAGCGGAGGCGGCGAT 61.617 61.111 12.98 0.00 46.35 4.58
2895 7003 2.159476 CCGTCACCGTCGAGAGATAAAA 60.159 50.000 0.00 0.00 45.19 1.52
2897 7005 3.177487 GTCACCGTCGAGAGATAAAACC 58.823 50.000 0.00 0.00 45.19 3.27
2898 7006 3.087031 TCACCGTCGAGAGATAAAACCT 58.913 45.455 0.00 0.00 45.19 3.50
2951 7059 0.970427 ATCAAATCCGGCCCACCAAC 60.970 55.000 0.00 0.00 34.57 3.77
2976 7084 6.399204 GCTGAGATTTTAGCCAAAAACATG 57.601 37.500 0.00 0.00 39.82 3.21
2982 7090 8.907222 AGATTTTAGCCAAAAACATGTTGAAT 57.093 26.923 12.82 0.00 39.82 2.57
2991 7099 9.202273 GCCAAAAACATGTTGAATAGTTATGAA 57.798 29.630 12.82 0.00 0.00 2.57
2998 7106 8.906867 ACATGTTGAATAGTTATGAATTCCTGG 58.093 33.333 2.27 0.00 32.25 4.45
3002 7110 8.398665 GTTGAATAGTTATGAATTCCTGGTGAC 58.601 37.037 2.27 0.00 32.25 3.67
3009 7117 1.734465 GAATTCCTGGTGACGCTTCAG 59.266 52.381 0.00 0.00 30.10 3.02
3041 7149 6.830114 GTGCTAGCTAGTACCATTTGTTAG 57.170 41.667 26.38 0.00 33.54 2.34
3042 7150 5.753921 GTGCTAGCTAGTACCATTTGTTAGG 59.246 44.000 26.38 0.00 33.54 2.69
3043 7151 4.750598 GCTAGCTAGTACCATTTGTTAGGC 59.249 45.833 21.62 0.00 0.00 3.93
3090 7204 2.293955 TCGTGAACCATTGTCGTCTGTA 59.706 45.455 0.00 0.00 0.00 2.74
3154 7268 4.346418 GTCCCAGATAGTGAATGAGACCAT 59.654 45.833 0.00 0.00 33.66 3.55
3304 7420 0.179029 ACGCTTGTACTGGCAACCTT 60.179 50.000 10.26 0.00 0.00 3.50
3308 7424 2.288213 GCTTGTACTGGCAACCTTTTCC 60.288 50.000 0.00 0.00 0.00 3.13
3364 7487 8.856247 CAAATTTGGGCGTTAGAAGTAATAAAC 58.144 33.333 10.49 0.00 0.00 2.01
3366 7489 7.507733 TTTGGGCGTTAGAAGTAATAAACAA 57.492 32.000 0.00 0.00 0.00 2.83
3370 7493 6.017325 GGCGTTAGAAGTAATAAACAAACCG 58.983 40.000 0.00 0.00 0.00 4.44
3375 7498 9.750882 GTTAGAAGTAATAAACAAACCGCTAAG 57.249 33.333 0.00 0.00 0.00 2.18
3393 7516 6.183360 CCGCTAAGTTAAACTTGGACCTTATG 60.183 42.308 0.00 0.00 38.76 1.90
3473 7596 0.618968 CTAGGGAGGCAAGAGGGTGT 60.619 60.000 0.00 0.00 0.00 4.16
3522 7653 4.425520 TGTTACCCGCAAAAGAAAAACAG 58.574 39.130 0.00 0.00 0.00 3.16
3533 7664 7.561556 GCAAAAGAAAAACAGATGTCATCTTG 58.438 34.615 12.88 10.80 37.58 3.02
3534 7665 7.306983 GCAAAAGAAAAACAGATGTCATCTTGG 60.307 37.037 12.88 5.68 37.58 3.61
3570 7701 2.174854 AGGGTGGTAAGTGGCATAATCC 59.825 50.000 0.00 0.00 0.00 3.01
3581 7712 3.625853 TGGCATAATCCACAATTTCGGA 58.374 40.909 0.00 0.00 35.27 4.55
3616 7747 6.476380 GTGTGAAGATTGATTTTGCAGTTGAA 59.524 34.615 0.00 0.00 0.00 2.69
3618 7749 6.698766 GTGAAGATTGATTTTGCAGTTGAACT 59.301 34.615 0.00 0.00 0.00 3.01
3630 7761 9.545105 TTTTGCAGTTGAACTTGAATATCAAAT 57.455 25.926 0.00 0.00 35.73 2.32
3644 7775 1.846007 TCAAATTAAGGCCGGTGCAT 58.154 45.000 1.90 0.00 40.13 3.96
3670 7801 3.525800 ACCCATGTTTCTACTTGGCTT 57.474 42.857 0.00 0.00 44.34 4.35
3679 7810 0.734889 CTACTTGGCTTCCCATTGCG 59.265 55.000 0.00 0.00 41.78 4.85
3683 7814 0.611618 TTGGCTTCCCATTGCGTGAT 60.612 50.000 0.00 0.00 41.78 3.06
3687 7818 2.362077 GGCTTCCCATTGCGTGATTATT 59.638 45.455 0.00 0.00 0.00 1.40
3688 7819 3.181476 GGCTTCCCATTGCGTGATTATTT 60.181 43.478 0.00 0.00 0.00 1.40
3689 7820 4.044426 GCTTCCCATTGCGTGATTATTTC 58.956 43.478 0.00 0.00 0.00 2.17
3690 7821 4.439974 GCTTCCCATTGCGTGATTATTTCA 60.440 41.667 0.00 0.00 0.00 2.69
3691 7822 5.737063 GCTTCCCATTGCGTGATTATTTCAT 60.737 40.000 0.00 0.00 36.54 2.57
3692 7823 5.850557 TCCCATTGCGTGATTATTTCATT 57.149 34.783 0.00 0.00 36.54 2.57
3693 7824 6.951062 TCCCATTGCGTGATTATTTCATTA 57.049 33.333 0.00 0.00 36.54 1.90
3694 7825 6.734137 TCCCATTGCGTGATTATTTCATTAC 58.266 36.000 0.00 0.00 36.54 1.89
3695 7826 6.545666 TCCCATTGCGTGATTATTTCATTACT 59.454 34.615 0.00 0.00 36.54 2.24
3696 7827 6.638063 CCCATTGCGTGATTATTTCATTACTG 59.362 38.462 0.00 0.00 36.54 2.74
3697 7828 7.195646 CCATTGCGTGATTATTTCATTACTGT 58.804 34.615 0.00 0.00 36.54 3.55
3698 7829 7.701924 CCATTGCGTGATTATTTCATTACTGTT 59.298 33.333 0.00 0.00 36.54 3.16
3699 7830 9.075519 CATTGCGTGATTATTTCATTACTGTTT 57.924 29.630 0.00 0.00 36.54 2.83
3700 7831 8.667987 TTGCGTGATTATTTCATTACTGTTTC 57.332 30.769 0.00 0.00 36.54 2.78
3701 7832 8.039603 TGCGTGATTATTTCATTACTGTTTCT 57.960 30.769 0.00 0.00 36.54 2.52
3702 7833 8.175069 TGCGTGATTATTTCATTACTGTTTCTC 58.825 33.333 0.00 0.00 36.54 2.87
3703 7834 8.175069 GCGTGATTATTTCATTACTGTTTCTCA 58.825 33.333 0.00 0.00 36.54 3.27
3711 7842 7.581213 TTCATTACTGTTTCTCATTTGGTGT 57.419 32.000 0.00 0.00 0.00 4.16
3712 7843 6.969366 TCATTACTGTTTCTCATTTGGTGTG 58.031 36.000 0.00 0.00 0.00 3.82
3713 7844 6.770303 TCATTACTGTTTCTCATTTGGTGTGA 59.230 34.615 0.00 0.00 0.00 3.58
3714 7845 7.448161 TCATTACTGTTTCTCATTTGGTGTGAT 59.552 33.333 0.00 0.00 31.03 3.06
3715 7846 8.729756 CATTACTGTTTCTCATTTGGTGTGATA 58.270 33.333 0.00 0.00 31.03 2.15
3716 7847 6.560253 ACTGTTTCTCATTTGGTGTGATAC 57.440 37.500 0.00 0.00 34.76 2.24
3717 7848 6.299141 ACTGTTTCTCATTTGGTGTGATACT 58.701 36.000 0.00 0.00 35.04 2.12
3718 7849 7.450074 ACTGTTTCTCATTTGGTGTGATACTA 58.550 34.615 0.00 0.00 35.04 1.82
3719 7850 8.103305 ACTGTTTCTCATTTGGTGTGATACTAT 58.897 33.333 0.00 0.00 35.04 2.12
3720 7851 8.492673 TGTTTCTCATTTGGTGTGATACTATC 57.507 34.615 0.00 0.00 35.04 2.08
3721 7852 8.321353 TGTTTCTCATTTGGTGTGATACTATCT 58.679 33.333 0.00 0.00 35.04 1.98
3722 7853 9.167311 GTTTCTCATTTGGTGTGATACTATCTT 57.833 33.333 0.00 0.00 32.83 2.40
3723 7854 8.722480 TTCTCATTTGGTGTGATACTATCTTG 57.278 34.615 0.00 0.00 31.03 3.02
3724 7855 7.851228 TCTCATTTGGTGTGATACTATCTTGT 58.149 34.615 0.00 0.00 0.00 3.16
3725 7856 7.981789 TCTCATTTGGTGTGATACTATCTTGTC 59.018 37.037 0.00 0.00 0.00 3.18
3726 7857 7.851228 TCATTTGGTGTGATACTATCTTGTCT 58.149 34.615 0.00 0.00 0.00 3.41
3727 7858 8.977412 TCATTTGGTGTGATACTATCTTGTCTA 58.023 33.333 0.00 0.00 0.00 2.59
3728 7859 9.599866 CATTTGGTGTGATACTATCTTGTCTAA 57.400 33.333 0.00 0.00 0.00 2.10
3731 7862 9.599866 TTGGTGTGATACTATCTTGTCTAATTG 57.400 33.333 0.00 0.00 0.00 2.32
3732 7863 8.204160 TGGTGTGATACTATCTTGTCTAATTGG 58.796 37.037 0.00 0.00 0.00 3.16
3733 7864 7.657761 GGTGTGATACTATCTTGTCTAATTGGG 59.342 40.741 0.00 0.00 0.00 4.12
3734 7865 8.204836 GTGTGATACTATCTTGTCTAATTGGGT 58.795 37.037 0.00 0.00 0.00 4.51
3735 7866 8.768397 TGTGATACTATCTTGTCTAATTGGGTT 58.232 33.333 0.00 0.00 0.00 4.11
3741 7872 7.980099 ACTATCTTGTCTAATTGGGTTAGTTCG 59.020 37.037 0.00 0.00 40.58 3.95
3742 7873 6.349243 TCTTGTCTAATTGGGTTAGTTCGA 57.651 37.500 0.00 0.00 40.58 3.71
3743 7874 6.161381 TCTTGTCTAATTGGGTTAGTTCGAC 58.839 40.000 0.00 0.00 40.58 4.20
3744 7875 5.471556 TGTCTAATTGGGTTAGTTCGACA 57.528 39.130 0.00 0.00 40.58 4.35
3745 7876 5.856156 TGTCTAATTGGGTTAGTTCGACAA 58.144 37.500 0.00 0.00 40.58 3.18
3746 7877 6.289834 TGTCTAATTGGGTTAGTTCGACAAA 58.710 36.000 0.00 0.00 40.58 2.83
3747 7878 6.203338 TGTCTAATTGGGTTAGTTCGACAAAC 59.797 38.462 0.00 0.00 40.58 2.93
3749 7880 5.684550 AATTGGGTTAGTTCGACAAACTC 57.315 39.130 0.00 0.00 45.28 3.01
3750 7881 2.746269 TGGGTTAGTTCGACAAACTCG 58.254 47.619 0.00 0.00 45.28 4.18
3751 7882 2.064014 GGGTTAGTTCGACAAACTCGG 58.936 52.381 0.00 0.00 45.28 4.63
3752 7883 2.064014 GGTTAGTTCGACAAACTCGGG 58.936 52.381 0.00 0.00 45.28 5.14
3753 7884 2.064014 GTTAGTTCGACAAACTCGGGG 58.936 52.381 0.00 0.00 45.28 5.73
3754 7885 0.037975 TAGTTCGACAAACTCGGGGC 60.038 55.000 0.00 0.00 45.28 5.80
3755 7886 1.595929 GTTCGACAAACTCGGGGCA 60.596 57.895 0.00 0.00 43.16 5.36
3756 7887 1.595929 TTCGACAAACTCGGGGCAC 60.596 57.895 0.00 0.00 43.16 5.01
3757 7888 3.411351 CGACAAACTCGGGGCACG 61.411 66.667 0.68 0.68 46.11 5.34
3758 7889 3.723348 GACAAACTCGGGGCACGC 61.723 66.667 3.08 0.00 43.86 5.34
3759 7890 4.555709 ACAAACTCGGGGCACGCA 62.556 61.111 3.08 0.00 43.53 5.24
3760 7891 4.025401 CAAACTCGGGGCACGCAC 62.025 66.667 3.08 0.00 43.53 5.34
3777 7908 4.802051 CGTCTGGGGGCCCACATG 62.802 72.222 31.61 21.89 41.89 3.21
3780 7911 4.468769 CTGGGGGCCCACATGCAT 62.469 66.667 31.61 0.00 41.89 3.96
3781 7912 3.026223 TGGGGGCCCACATGCATA 61.026 61.111 27.42 0.00 41.89 3.14
3782 7913 2.521708 GGGGGCCCACATGCATAC 60.522 66.667 26.86 1.47 35.81 2.39
3783 7914 2.906897 GGGGCCCACATGCATACG 60.907 66.667 26.86 0.00 0.00 3.06
3784 7915 2.906897 GGGCCCACATGCATACGG 60.907 66.667 19.95 2.29 0.00 4.02
3785 7916 3.595758 GGCCCACATGCATACGGC 61.596 66.667 18.19 18.19 45.13 5.68
3786 7917 3.595758 GCCCACATGCATACGGCC 61.596 66.667 16.40 0.00 43.89 6.13
3787 7918 2.124362 CCCACATGCATACGGCCA 60.124 61.111 2.24 0.00 43.89 5.36
3788 7919 1.529010 CCCACATGCATACGGCCAT 60.529 57.895 2.24 0.00 43.89 4.40
3789 7920 1.518056 CCCACATGCATACGGCCATC 61.518 60.000 2.24 0.00 43.89 3.51
3790 7921 1.518056 CCACATGCATACGGCCATCC 61.518 60.000 2.24 0.00 43.89 3.51
3791 7922 0.818852 CACATGCATACGGCCATCCA 60.819 55.000 2.24 0.00 43.89 3.41
3792 7923 0.111061 ACATGCATACGGCCATCCAT 59.889 50.000 2.24 0.00 43.89 3.41
3793 7924 1.250328 CATGCATACGGCCATCCATT 58.750 50.000 2.24 0.00 43.89 3.16
3794 7925 1.614903 CATGCATACGGCCATCCATTT 59.385 47.619 2.24 0.00 43.89 2.32
3795 7926 1.031235 TGCATACGGCCATCCATTTG 58.969 50.000 2.24 0.00 43.89 2.32
3796 7927 0.318955 GCATACGGCCATCCATTTGC 60.319 55.000 2.24 0.00 36.11 3.68
3797 7928 1.321474 CATACGGCCATCCATTTGCT 58.679 50.000 2.24 0.00 0.00 3.91
3798 7929 1.682854 CATACGGCCATCCATTTGCTT 59.317 47.619 2.24 0.00 0.00 3.91
3799 7930 1.388547 TACGGCCATCCATTTGCTTC 58.611 50.000 2.24 0.00 0.00 3.86
3800 7931 0.611618 ACGGCCATCCATTTGCTTCA 60.612 50.000 2.24 0.00 0.00 3.02
3801 7932 0.531657 CGGCCATCCATTTGCTTCAA 59.468 50.000 2.24 0.00 0.00 2.69
3802 7933 1.470285 CGGCCATCCATTTGCTTCAAG 60.470 52.381 2.24 0.00 0.00 3.02
3803 7934 1.826720 GGCCATCCATTTGCTTCAAGA 59.173 47.619 0.00 0.00 0.00 3.02
3804 7935 2.433239 GGCCATCCATTTGCTTCAAGAT 59.567 45.455 0.00 0.00 0.00 2.40
3805 7936 3.454375 GCCATCCATTTGCTTCAAGATG 58.546 45.455 0.00 0.00 0.00 2.90
3806 7937 3.454375 CCATCCATTTGCTTCAAGATGC 58.546 45.455 0.00 1.38 31.80 3.91
3807 7938 3.454375 CATCCATTTGCTTCAAGATGCC 58.546 45.455 5.62 0.00 0.00 4.40
3808 7939 2.811410 TCCATTTGCTTCAAGATGCCT 58.189 42.857 5.62 0.00 0.00 4.75
3809 7940 2.494471 TCCATTTGCTTCAAGATGCCTG 59.506 45.455 5.62 1.89 0.00 4.85
3810 7941 2.268298 CATTTGCTTCAAGATGCCTGC 58.732 47.619 5.62 0.00 0.00 4.85
3811 7942 0.604578 TTTGCTTCAAGATGCCTGCC 59.395 50.000 5.62 0.00 0.00 4.85
3812 7943 1.252904 TTGCTTCAAGATGCCTGCCC 61.253 55.000 5.62 0.00 0.00 5.36
3813 7944 2.768492 GCTTCAAGATGCCTGCCCG 61.768 63.158 0.00 0.00 0.00 6.13
3814 7945 2.751436 TTCAAGATGCCTGCCCGC 60.751 61.111 0.00 0.00 0.00 6.13
3815 7946 3.565961 TTCAAGATGCCTGCCCGCA 62.566 57.895 0.00 0.00 44.35 5.69
3816 7947 3.818787 CAAGATGCCTGCCCGCAC 61.819 66.667 0.00 0.00 42.70 5.34
3817 7948 4.039092 AAGATGCCTGCCCGCACT 62.039 61.111 0.00 0.00 42.70 4.40
3818 7949 3.984193 AAGATGCCTGCCCGCACTC 62.984 63.158 0.00 0.00 42.70 3.51
3824 7955 4.451150 CTGCCCGCACTCGCCTAA 62.451 66.667 0.00 0.00 33.11 2.69
3825 7956 3.950794 CTGCCCGCACTCGCCTAAA 62.951 63.158 0.00 0.00 33.11 1.85
3826 7957 2.744709 GCCCGCACTCGCCTAAAA 60.745 61.111 0.00 0.00 33.11 1.52
3827 7958 2.329614 GCCCGCACTCGCCTAAAAA 61.330 57.895 0.00 0.00 33.11 1.94
3842 7973 3.482383 AAAAATGCCTGCCCCCAC 58.518 55.556 0.00 0.00 0.00 4.61
3843 7974 1.461075 AAAAATGCCTGCCCCCACA 60.461 52.632 0.00 0.00 0.00 4.17
3844 7975 1.059006 AAAAATGCCTGCCCCCACAA 61.059 50.000 0.00 0.00 0.00 3.33
3845 7976 1.767654 AAAATGCCTGCCCCCACAAC 61.768 55.000 0.00 0.00 0.00 3.32
3846 7977 2.677968 AAATGCCTGCCCCCACAACT 62.678 55.000 0.00 0.00 0.00 3.16
3847 7978 3.892104 ATGCCTGCCCCCACAACTG 62.892 63.158 0.00 0.00 0.00 3.16
3848 7979 4.603535 GCCTGCCCCCACAACTGT 62.604 66.667 0.00 0.00 0.00 3.55
3849 7980 2.198426 CCTGCCCCCACAACTGTT 59.802 61.111 0.00 0.00 0.00 3.16
3850 7981 2.202395 CCTGCCCCCACAACTGTTG 61.202 63.158 18.44 18.44 0.00 3.33
3851 7982 1.455587 CTGCCCCCACAACTGTTGT 60.456 57.895 19.85 19.85 46.75 3.32
3852 7983 1.454847 TGCCCCCACAACTGTTGTC 60.455 57.895 22.42 11.98 43.23 3.18
3853 7984 2.551912 GCCCCCACAACTGTTGTCG 61.552 63.158 22.42 16.37 43.23 4.35
3854 7985 1.147376 CCCCCACAACTGTTGTCGA 59.853 57.895 22.42 0.00 43.23 4.20
3855 7986 0.884704 CCCCCACAACTGTTGTCGAG 60.885 60.000 22.42 13.95 43.23 4.04
3856 7987 1.507141 CCCCACAACTGTTGTCGAGC 61.507 60.000 22.42 0.00 43.23 5.03
3857 7988 0.532862 CCCACAACTGTTGTCGAGCT 60.533 55.000 22.42 0.00 43.23 4.09
3858 7989 0.861837 CCACAACTGTTGTCGAGCTC 59.138 55.000 22.42 2.73 43.23 4.09
3859 7990 1.570813 CACAACTGTTGTCGAGCTCA 58.429 50.000 22.42 0.00 43.23 4.26
3860 7991 2.138320 CACAACTGTTGTCGAGCTCAT 58.862 47.619 22.42 0.00 43.23 2.90
3861 7992 2.096565 CACAACTGTTGTCGAGCTCATG 60.097 50.000 22.42 5.51 43.23 3.07
3862 7993 2.224042 ACAACTGTTGTCGAGCTCATGA 60.224 45.455 19.85 0.18 40.56 3.07
3863 7994 2.071688 ACTGTTGTCGAGCTCATGAC 57.928 50.000 15.40 14.10 35.67 3.06
3864 7995 0.987715 CTGTTGTCGAGCTCATGACG 59.012 55.000 15.40 0.00 37.94 4.35
3865 7996 0.388520 TGTTGTCGAGCTCATGACGG 60.389 55.000 15.40 0.00 37.94 4.79
3866 7997 1.446099 TTGTCGAGCTCATGACGGC 60.446 57.895 15.40 1.40 37.94 5.68
3867 7998 2.951745 GTCGAGCTCATGACGGCG 60.952 66.667 15.40 4.80 0.00 6.46
3868 7999 4.854784 TCGAGCTCATGACGGCGC 62.855 66.667 15.40 0.00 0.00 6.53
3870 8001 4.819761 GAGCTCATGACGGCGCCA 62.820 66.667 28.98 7.49 0.00 5.69
3873 8004 4.457496 CTCATGACGGCGCCACCT 62.457 66.667 28.98 7.76 35.61 4.00
3874 8005 4.758251 TCATGACGGCGCCACCTG 62.758 66.667 28.98 21.01 35.61 4.00
3881 8012 4.101448 GGCGCCACCTGGTCTCAT 62.101 66.667 24.80 0.00 37.57 2.90
3882 8013 2.512515 GCGCCACCTGGTCTCATC 60.513 66.667 0.00 0.00 37.57 2.92
3883 8014 2.202797 CGCCACCTGGTCTCATCG 60.203 66.667 0.00 0.00 37.57 3.84
3884 8015 2.710902 CGCCACCTGGTCTCATCGA 61.711 63.158 0.00 0.00 37.57 3.59
3885 8016 1.826024 GCCACCTGGTCTCATCGAT 59.174 57.895 0.00 0.00 37.57 3.59
3886 8017 0.179000 GCCACCTGGTCTCATCGATT 59.821 55.000 0.00 0.00 37.57 3.34
3887 8018 1.808133 GCCACCTGGTCTCATCGATTC 60.808 57.143 0.00 0.00 37.57 2.52
3888 8019 1.202580 CCACCTGGTCTCATCGATTCC 60.203 57.143 0.00 0.00 0.00 3.01
3889 8020 1.482182 CACCTGGTCTCATCGATTCCA 59.518 52.381 0.00 1.79 0.00 3.53
3890 8021 1.759445 ACCTGGTCTCATCGATTCCAG 59.241 52.381 19.93 19.93 43.46 3.86
3891 8022 1.539929 CCTGGTCTCATCGATTCCAGC 60.540 57.143 20.80 8.90 42.77 4.85
3892 8023 0.465705 TGGTCTCATCGATTCCAGCC 59.534 55.000 0.00 0.00 0.00 4.85
3893 8024 0.755686 GGTCTCATCGATTCCAGCCT 59.244 55.000 0.00 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.561241 TGCTTGGCGGTGGGTACA 61.561 61.111 0.00 0.00 0.00 2.90
8 9 3.053896 GTGCTTGGCGGTGGGTAC 61.054 66.667 0.00 0.00 0.00 3.34
10 11 4.954970 CAGTGCTTGGCGGTGGGT 62.955 66.667 0.00 0.00 0.00 4.51
11 12 4.641645 TCAGTGCTTGGCGGTGGG 62.642 66.667 0.00 0.00 0.00 4.61
15 16 2.867429 CTTAATTTCAGTGCTTGGCGG 58.133 47.619 0.00 0.00 0.00 6.13
17 18 3.582714 AGCTTAATTTCAGTGCTTGGC 57.417 42.857 0.00 0.00 0.00 4.52
20 21 3.321682 TGCCAAGCTTAATTTCAGTGCTT 59.678 39.130 0.00 0.00 43.61 3.91
23 24 3.256631 AGGTGCCAAGCTTAATTTCAGTG 59.743 43.478 0.00 0.00 0.00 3.66
48 49 7.324178 TCTTGATAGTAGTTTTGAGCTTCCTC 58.676 38.462 0.00 0.00 38.62 3.71
49 50 7.246171 TCTTGATAGTAGTTTTGAGCTTCCT 57.754 36.000 0.00 0.00 0.00 3.36
50 51 7.907214 TTCTTGATAGTAGTTTTGAGCTTCC 57.093 36.000 0.00 0.00 0.00 3.46
85 91 0.672401 GCGAATTGAGAACCCGTGGA 60.672 55.000 0.00 0.00 0.00 4.02
89 95 4.035091 TGATTTATGCGAATTGAGAACCCG 59.965 41.667 0.00 0.00 0.00 5.28
110 116 0.237235 GCTTGACGTTTTGGCGATGA 59.763 50.000 0.00 0.00 35.59 2.92
118 124 0.537371 CTCCCCTGGCTTGACGTTTT 60.537 55.000 0.00 0.00 0.00 2.43
122 128 1.218316 GTACTCCCCTGGCTTGACG 59.782 63.158 0.00 0.00 0.00 4.35
141 147 2.294078 ACTTTAGCTCGCCCCTGCT 61.294 57.895 0.00 0.00 42.67 4.24
143 149 2.109126 GCACTTTAGCTCGCCCCTG 61.109 63.158 0.00 0.00 0.00 4.45
150 156 3.120304 CCCGTTTTGTAGCACTTTAGCTC 60.120 47.826 0.00 0.00 45.26 4.09
191 197 8.158132 TCCCCTTTGTTAGTTTTTCTTTTGTTT 58.842 29.630 0.00 0.00 0.00 2.83
197 203 7.344612 ACTGAATCCCCTTTGTTAGTTTTTCTT 59.655 33.333 0.00 0.00 0.00 2.52
199 205 6.923508 CACTGAATCCCCTTTGTTAGTTTTTC 59.076 38.462 0.00 0.00 0.00 2.29
224 230 2.335712 CCTTTTGCGCTCCAGGACC 61.336 63.158 9.73 0.00 0.00 4.46
230 236 4.103103 GCGGTCCTTTTGCGCTCC 62.103 66.667 9.73 0.00 0.00 4.70
234 240 0.669318 TCTGTAGCGGTCCTTTTGCG 60.669 55.000 0.00 0.00 0.00 4.85
246 252 6.155475 ACTCAATAATGTCTCCTCTGTAGC 57.845 41.667 0.00 0.00 0.00 3.58
249 255 7.482169 TGTTACTCAATAATGTCTCCTCTGT 57.518 36.000 0.00 0.00 0.00 3.41
250 256 8.777865 TTTGTTACTCAATAATGTCTCCTCTG 57.222 34.615 0.00 0.00 35.84 3.35
254 260 8.547967 TCACTTTGTTACTCAATAATGTCTCC 57.452 34.615 0.00 0.00 35.84 3.71
256 262 8.993121 CACTCACTTTGTTACTCAATAATGTCT 58.007 33.333 0.00 0.00 35.84 3.41
257 263 8.774586 ACACTCACTTTGTTACTCAATAATGTC 58.225 33.333 0.00 0.00 35.84 3.06
259 265 8.559536 ACACACTCACTTTGTTACTCAATAATG 58.440 33.333 0.00 0.00 35.84 1.90
320 336 6.998968 TTCACATGAATTTTGGCAGTTTTT 57.001 29.167 0.00 0.00 0.00 1.94
321 337 6.016943 CCATTCACATGAATTTTGGCAGTTTT 60.017 34.615 0.00 0.00 42.41 2.43
323 339 4.998672 CCATTCACATGAATTTTGGCAGTT 59.001 37.500 0.00 0.00 42.41 3.16
325 341 4.823157 TCCATTCACATGAATTTTGGCAG 58.177 39.130 0.00 0.00 42.41 4.85
326 342 4.886496 TCCATTCACATGAATTTTGGCA 57.114 36.364 0.00 0.00 42.41 4.92
328 344 5.239351 TGCTTCCATTCACATGAATTTTGG 58.761 37.500 0.00 5.53 42.41 3.28
329 345 6.788684 TTGCTTCCATTCACATGAATTTTG 57.211 33.333 0.00 0.00 42.41 2.44
367 391 7.226128 CAGATGCATTTGCTAGTCTATCAAGAA 59.774 37.037 4.04 0.00 42.66 2.52
373 397 5.678583 ACACAGATGCATTTGCTAGTCTAT 58.321 37.500 16.67 0.00 42.66 1.98
376 400 3.686241 TGACACAGATGCATTTGCTAGTC 59.314 43.478 21.21 21.21 42.66 2.59
379 403 3.189080 GTGTGACACAGATGCATTTGCTA 59.811 43.478 16.67 0.00 36.79 3.49
381 405 2.030540 AGTGTGACACAGATGCATTTGC 60.031 45.455 18.95 2.11 36.74 3.68
389 413 4.280929 TGTTACTAGCAGTGTGACACAGAT 59.719 41.667 18.95 11.49 36.74 2.90
393 417 5.950883 TCTATGTTACTAGCAGTGTGACAC 58.049 41.667 7.83 7.83 36.89 3.67
424 473 8.424731 GTGTTTTGTACTTTCACTCAACTTTTG 58.575 33.333 0.00 0.00 0.00 2.44
429 478 5.337554 GGGTGTTTTGTACTTTCACTCAAC 58.662 41.667 0.00 0.00 30.88 3.18
430 479 4.399934 GGGGTGTTTTGTACTTTCACTCAA 59.600 41.667 10.93 0.00 31.96 3.02
432 481 3.949113 TGGGGTGTTTTGTACTTTCACTC 59.051 43.478 0.00 0.00 0.00 3.51
434 483 4.722361 TTGGGGTGTTTTGTACTTTCAC 57.278 40.909 0.00 0.00 0.00 3.18
490 539 9.914131 GTTGTCCAAGAAGCTAGATTTAAATTT 57.086 29.630 1.43 0.00 0.00 1.82
491 540 8.523658 GGTTGTCCAAGAAGCTAGATTTAAATT 58.476 33.333 1.43 0.00 0.00 1.82
492 541 7.148239 CGGTTGTCCAAGAAGCTAGATTTAAAT 60.148 37.037 0.00 0.00 0.00 1.40
493 542 6.148811 CGGTTGTCCAAGAAGCTAGATTTAAA 59.851 38.462 0.00 0.00 0.00 1.52
494 543 5.642063 CGGTTGTCCAAGAAGCTAGATTTAA 59.358 40.000 0.00 0.00 0.00 1.52
496 545 4.003648 CGGTTGTCCAAGAAGCTAGATTT 58.996 43.478 0.00 0.00 0.00 2.17
501 550 2.103432 TGTTCGGTTGTCCAAGAAGCTA 59.897 45.455 0.00 0.00 0.00 3.32
504 553 3.488553 GGTTTGTTCGGTTGTCCAAGAAG 60.489 47.826 0.00 0.00 0.00 2.85
524 573 3.512724 AGCAAATAAGCAAAGCATCTGGT 59.487 39.130 0.00 0.00 36.85 4.00
525 574 4.119442 AGCAAATAAGCAAAGCATCTGG 57.881 40.909 0.00 0.00 36.85 3.86
526 575 6.304126 CAAAAGCAAATAAGCAAAGCATCTG 58.696 36.000 0.00 0.00 36.85 2.90
527 576 5.106830 GCAAAAGCAAATAAGCAAAGCATCT 60.107 36.000 0.00 0.00 36.85 2.90
528 577 5.084055 GCAAAAGCAAATAAGCAAAGCATC 58.916 37.500 0.00 0.00 36.85 3.91
529 578 4.083164 GGCAAAAGCAAATAAGCAAAGCAT 60.083 37.500 0.00 0.00 36.85 3.79
530 579 3.250521 GGCAAAAGCAAATAAGCAAAGCA 59.749 39.130 0.00 0.00 36.85 3.91
531 580 3.499537 AGGCAAAAGCAAATAAGCAAAGC 59.500 39.130 0.00 0.00 36.85 3.51
532 581 5.678132 AAGGCAAAAGCAAATAAGCAAAG 57.322 34.783 0.00 0.00 36.85 2.77
533 582 6.448207 AAAAGGCAAAAGCAAATAAGCAAA 57.552 29.167 0.00 0.00 36.85 3.68
557 606 4.090761 AGATGTGGAAAGACAGCAGAAA 57.909 40.909 0.00 0.00 34.59 2.52
562 611 4.507710 TGACATAGATGTGGAAAGACAGC 58.492 43.478 0.00 0.00 41.95 4.40
571 620 6.146184 GGATGTACGATTTGACATAGATGTGG 59.854 42.308 0.00 0.00 41.95 4.17
582 631 3.669536 TGCACAAGGATGTACGATTTGA 58.330 40.909 0.00 0.00 37.82 2.69
586 635 3.118629 AGTGATGCACAAGGATGTACGAT 60.119 43.478 0.00 0.00 37.82 3.73
606 677 2.564721 GCAAGGCCCGCTCAAAAGT 61.565 57.895 0.00 0.00 0.00 2.66
607 678 1.880819 ATGCAAGGCCCGCTCAAAAG 61.881 55.000 15.30 0.00 0.00 2.27
611 684 2.751436 GAATGCAAGGCCCGCTCA 60.751 61.111 15.30 1.87 0.00 4.26
640 715 5.182950 TGACATTGCAAGACACCGAATAAAT 59.817 36.000 4.94 0.00 0.00 1.40
662 737 4.447290 CCACATCCGTACCAATAACATGA 58.553 43.478 0.00 0.00 0.00 3.07
698 4210 1.577468 CATAACCTCCGCGTATGCAA 58.423 50.000 4.92 0.00 42.97 4.08
699 4211 0.878523 GCATAACCTCCGCGTATGCA 60.879 55.000 25.07 0.00 42.04 3.96
700 4212 0.878523 TGCATAACCTCCGCGTATGC 60.879 55.000 23.93 23.93 42.58 3.14
701 4213 1.460743 CATGCATAACCTCCGCGTATG 59.539 52.381 4.92 7.34 0.00 2.39
702 4214 1.795768 CATGCATAACCTCCGCGTAT 58.204 50.000 4.92 0.00 0.00 3.06
703 4215 0.878523 GCATGCATAACCTCCGCGTA 60.879 55.000 14.21 0.00 0.00 4.42
704 4216 2.180204 GCATGCATAACCTCCGCGT 61.180 57.895 14.21 0.00 0.00 6.01
705 4217 2.633657 GCATGCATAACCTCCGCG 59.366 61.111 14.21 0.00 0.00 6.46
706 4218 2.555547 GGGCATGCATAACCTCCGC 61.556 63.158 21.36 6.19 0.00 5.54
724 4240 2.619074 GGGAAACTGAGAGAACATGGGG 60.619 54.545 0.00 0.00 0.00 4.96
780 4296 1.486310 TGGGTCAGACTGCATCATACC 59.514 52.381 0.00 0.00 34.89 2.73
782 4298 1.136891 CGTGGGTCAGACTGCATCATA 59.863 52.381 0.00 0.00 0.00 2.15
783 4299 0.107993 CGTGGGTCAGACTGCATCAT 60.108 55.000 0.00 0.00 0.00 2.45
785 4301 0.459237 CTCGTGGGTCAGACTGCATC 60.459 60.000 0.00 0.00 0.00 3.91
786 4302 1.593787 CTCGTGGGTCAGACTGCAT 59.406 57.895 0.00 0.00 0.00 3.96
787 4303 3.051210 CTCGTGGGTCAGACTGCA 58.949 61.111 0.00 0.00 0.00 4.41
817 4338 1.980052 CTCCTCGTGGCTGGGTAAA 59.020 57.895 0.00 0.00 0.00 2.01
862 4393 2.687914 GCTATCCCCCAATGGATATGGC 60.688 54.545 0.00 0.92 44.41 4.40
909 4440 3.509575 CGATGAGAGAGGCCTAGCTTATT 59.490 47.826 4.42 0.00 0.00 1.40
917 4448 2.841988 GGGCGATGAGAGAGGCCT 60.842 66.667 3.86 3.86 45.77 5.19
957 4492 1.405391 GCTGACTTGAGGAAGAGGAGC 60.405 57.143 0.00 0.00 32.98 4.70
958 4493 1.206849 GGCTGACTTGAGGAAGAGGAG 59.793 57.143 0.00 0.00 32.98 3.69
1107 4674 0.895559 CCACCTTCCAGACAAAGGCC 60.896 60.000 0.00 0.00 46.03 5.19
1112 4704 0.108585 GACAGCCACCTTCCAGACAA 59.891 55.000 0.00 0.00 0.00 3.18
1116 4712 2.046892 CCGACAGCCACCTTCCAG 60.047 66.667 0.00 0.00 0.00 3.86
1127 4723 3.420839 AAAGAAACAAGTTGCCGACAG 57.579 42.857 1.81 0.00 0.00 3.51
1134 4730 3.063861 GGCAAGGCAAAAGAAACAAGTTG 59.936 43.478 0.00 0.00 0.00 3.16
1142 4758 1.739049 CACCGGCAAGGCAAAAGAA 59.261 52.632 0.00 0.00 46.52 2.52
1173 4796 1.153086 GGCCTTGCAGATCCGACAT 60.153 57.895 0.00 0.00 0.00 3.06
1176 4799 1.078214 CTTGGCCTTGCAGATCCGA 60.078 57.895 3.32 0.00 0.00 4.55
1197 4820 1.371183 CGGCTTGAACTCCTCCACA 59.629 57.895 0.00 0.00 0.00 4.17
1227 4850 4.126390 CAGTTGAGCAGCGTCGCG 62.126 66.667 12.30 0.00 36.85 5.87
1301 4924 2.472059 CCGATGCCGTTGATGGTGG 61.472 63.158 0.00 0.00 0.00 4.61
1356 4979 3.821033 GCTTGTTGTTGGTGGAGTAGATT 59.179 43.478 0.00 0.00 0.00 2.40
1392 5026 4.263949 CCATGGGGATTAATTAGGAGGGAC 60.264 50.000 2.85 0.00 35.59 4.46
1394 5028 3.564352 GCCATGGGGATTAATTAGGAGGG 60.564 52.174 15.13 0.00 35.59 4.30
1399 5033 5.221501 CCAACAAGCCATGGGGATTAATTAG 60.222 44.000 15.13 0.00 41.95 1.73
1404 5047 1.360852 ACCAACAAGCCATGGGGATTA 59.639 47.619 15.13 0.00 41.95 1.75
1405 5048 0.116940 ACCAACAAGCCATGGGGATT 59.883 50.000 15.13 0.00 45.60 3.01
1407 5050 0.105246 AAACCAACAAGCCATGGGGA 60.105 50.000 15.13 0.00 41.17 4.81
1428 5071 7.901322 AGGGCCACATCTTCTTCTATATATACA 59.099 37.037 6.18 0.00 0.00 2.29
1431 5074 8.763601 GTTAGGGCCACATCTTCTTCTATATAT 58.236 37.037 6.18 0.00 0.00 0.86
1447 5100 2.442087 GGCATGGGTTAGGGCCAC 60.442 66.667 6.18 0.00 45.70 5.01
1679 5427 4.929819 ACAAAATAACAACACCTCCCAC 57.070 40.909 0.00 0.00 0.00 4.61
1721 5470 3.582780 AGCCTAACACGCAACTACTAAC 58.417 45.455 0.00 0.00 0.00 2.34
1723 5472 3.129287 GGTAGCCTAACACGCAACTACTA 59.871 47.826 0.00 0.00 32.51 1.82
1742 5491 7.996644 TGCATGATACTAGATATGATACGGGTA 59.003 37.037 0.00 0.00 0.00 3.69
1745 5494 8.355913 ACATGCATGATACTAGATATGATACGG 58.644 37.037 32.75 0.00 0.00 4.02
1754 5512 6.709397 CCTTGTTGACATGCATGATACTAGAT 59.291 38.462 32.75 7.85 0.00 1.98
1755 5513 6.051074 CCTTGTTGACATGCATGATACTAGA 58.949 40.000 32.75 14.84 0.00 2.43
1776 5534 3.450457 TGTCACCTCAACAAAATTGCCTT 59.550 39.130 0.00 0.00 0.00 4.35
1777 5535 3.030291 TGTCACCTCAACAAAATTGCCT 58.970 40.909 0.00 0.00 0.00 4.75
1778 5536 3.451141 TGTCACCTCAACAAAATTGCC 57.549 42.857 0.00 0.00 0.00 4.52
1779 5537 7.475771 TTTTATGTCACCTCAACAAAATTGC 57.524 32.000 0.00 0.00 0.00 3.56
1809 5567 9.917887 ATGATACTCAATCCTCTTTTTCTTCAT 57.082 29.630 0.00 0.00 33.22 2.57
1843 5616 9.469807 GCCATATATGTCATAGAGTAGCATAAC 57.530 37.037 11.73 0.00 0.00 1.89
1844 5617 9.200817 TGCCATATATGTCATAGAGTAGCATAA 57.799 33.333 11.73 0.00 0.00 1.90
1859 5632 9.243105 GGTGACCTTATTTATTGCCATATATGT 57.757 33.333 11.73 0.00 0.00 2.29
1970 5893 7.809806 GGCATTAAGTTTGCTTATAATGGCTAG 59.190 37.037 18.11 0.00 44.33 3.42
1972 5895 6.515832 GGCATTAAGTTTGCTTATAATGGCT 58.484 36.000 18.11 0.00 44.33 4.75
1973 5896 5.402270 CGGCATTAAGTTTGCTTATAATGGC 59.598 40.000 16.38 16.38 44.30 4.40
1977 5900 5.336744 GTGCGGCATTAAGTTTGCTTATAA 58.663 37.500 5.72 0.00 40.03 0.98
1978 5901 4.495019 CGTGCGGCATTAAGTTTGCTTATA 60.495 41.667 5.72 0.00 40.03 0.98
1982 5905 0.109781 CGTGCGGCATTAAGTTTGCT 60.110 50.000 5.72 0.00 40.03 3.91
2026 5949 5.983720 CGGACTACAAGTACATTCCATAAGG 59.016 44.000 0.00 0.00 0.00 2.69
2030 5953 6.462487 CCATACGGACTACAAGTACATTCCAT 60.462 42.308 0.00 0.00 0.00 3.41
2031 5954 5.163488 CCATACGGACTACAAGTACATTCCA 60.163 44.000 0.00 0.00 0.00 3.53
2032 5955 5.287226 CCATACGGACTACAAGTACATTCC 58.713 45.833 0.00 0.00 0.00 3.01
2033 5956 4.743644 GCCATACGGACTACAAGTACATTC 59.256 45.833 0.00 0.00 0.00 2.67
2034 5957 4.404715 AGCCATACGGACTACAAGTACATT 59.595 41.667 0.00 0.00 0.00 2.71
2035 5958 3.958798 AGCCATACGGACTACAAGTACAT 59.041 43.478 0.00 0.00 0.00 2.29
2044 5967 0.536687 AGCGCTAGCCATACGGACTA 60.537 55.000 8.99 0.00 46.67 2.59
2046 5969 0.109689 CTAGCGCTAGCCATACGGAC 60.110 60.000 30.06 0.00 46.67 4.79
2061 5984 4.437820 CAGAAAGTTGTTTCGTTTGCTAGC 59.562 41.667 8.10 8.10 45.90 3.42
2062 5985 5.569413 ACAGAAAGTTGTTTCGTTTGCTAG 58.431 37.500 0.00 0.00 45.90 3.42
2063 5986 5.554822 ACAGAAAGTTGTTTCGTTTGCTA 57.445 34.783 0.00 0.00 45.90 3.49
2064 5987 4.434713 ACAGAAAGTTGTTTCGTTTGCT 57.565 36.364 0.00 0.00 45.90 3.91
2090 6013 0.390124 TAACACGAGAGTTTGGCGGT 59.610 50.000 0.00 0.00 46.40 5.68
2113 6040 6.634805 AGTTAGATCATGAACGTCACTCAAT 58.365 36.000 0.00 0.00 0.00 2.57
2169 6119 1.148446 TCCCCTAGGTACCGCACATAT 59.852 52.381 8.29 0.00 0.00 1.78
2171 6121 0.105142 ATCCCCTAGGTACCGCACAT 60.105 55.000 8.29 0.00 0.00 3.21
2178 6128 1.142870 TGCATTGCATCCCCTAGGTAC 59.857 52.381 7.38 0.00 31.71 3.34
2194 6144 9.999660 GAACATATGATCTATATCTCCATGCAT 57.000 33.333 10.38 0.00 32.93 3.96
2203 6153 9.376075 CAACAGTGGGAACATATGATCTATATC 57.624 37.037 10.38 0.00 46.14 1.63
2222 6172 6.534793 ACAAAAAGGCAAAGATTACAACAGTG 59.465 34.615 0.00 0.00 0.00 3.66
2223 6173 6.534793 CACAAAAAGGCAAAGATTACAACAGT 59.465 34.615 0.00 0.00 0.00 3.55
2301 6251 3.078837 TGGTGCGGTATCCTTTTTCTTC 58.921 45.455 0.00 0.00 0.00 2.87
2303 6253 2.711542 CTGGTGCGGTATCCTTTTTCT 58.288 47.619 0.00 0.00 0.00 2.52
2316 6266 1.695893 CGATGTTAGTGGCTGGTGCG 61.696 60.000 0.00 0.00 40.82 5.34
2341 6291 1.134128 CATGACCCACGGGATTCATGA 60.134 52.381 22.59 0.00 44.68 3.07
2363 6313 5.941555 AAGATGAACCCTACACCTAGAAG 57.058 43.478 0.00 0.00 0.00 2.85
2364 6314 5.546499 ACAAAGATGAACCCTACACCTAGAA 59.454 40.000 0.00 0.00 0.00 2.10
2382 6332 6.058833 TGGTCAATTAACAGCAGTACAAAGA 58.941 36.000 0.00 0.00 0.00 2.52
2384 6334 6.294453 CCATGGTCAATTAACAGCAGTACAAA 60.294 38.462 2.57 0.00 0.00 2.83
2385 6335 5.182950 CCATGGTCAATTAACAGCAGTACAA 59.817 40.000 2.57 0.00 0.00 2.41
2387 6337 4.941263 TCCATGGTCAATTAACAGCAGTAC 59.059 41.667 12.58 0.00 0.00 2.73
2402 6355 7.156876 TGATGAGTAAACAAATTCCATGGTC 57.843 36.000 12.58 0.00 0.00 4.02
2403 6356 7.616935 AGATGATGAGTAAACAAATTCCATGGT 59.383 33.333 12.58 0.00 0.00 3.55
2452 6406 4.079446 GCTACAAGCACAAGGCCA 57.921 55.556 5.01 0.00 46.50 5.36
2487 6517 6.255887 CCTGCAAGCAGTACAGTATTAGTTAC 59.744 42.308 19.60 0.00 42.15 2.50
2491 6521 4.122776 CCCTGCAAGCAGTACAGTATTAG 58.877 47.826 19.60 1.66 42.15 1.73
2497 6558 2.472695 TTACCCTGCAAGCAGTACAG 57.527 50.000 19.60 8.73 42.15 2.74
2583 6648 3.391665 ATAGGCCGTCCAGCAGCAC 62.392 63.158 0.00 0.00 33.74 4.40
2625 6690 6.150809 TGTGTATGTATGTACTGACCGTTACA 59.849 38.462 0.00 0.00 0.00 2.41
2628 6693 5.648178 TGTGTATGTATGTACTGACCGTT 57.352 39.130 0.00 0.00 0.00 4.44
2656 6727 2.278332 AGTCTGGGTTTGGAGCTTTC 57.722 50.000 0.00 0.00 0.00 2.62
2661 6732 3.771577 AGTGTAAGTCTGGGTTTGGAG 57.228 47.619 0.00 0.00 0.00 3.86
2665 6736 3.626930 TGCAAAGTGTAAGTCTGGGTTT 58.373 40.909 0.00 0.00 0.00 3.27
2668 6740 4.832248 TCTATGCAAAGTGTAAGTCTGGG 58.168 43.478 0.00 0.00 0.00 4.45
2682 6759 7.469043 GCACCACAATTGATTAGATCTATGCAA 60.469 37.037 13.59 15.82 0.00 4.08
2688 6780 5.121380 AGGCACCACAATTGATTAGATCT 57.879 39.130 13.59 0.00 0.00 2.75
2697 6789 5.600696 AGTTAAAAGAAGGCACCACAATTG 58.399 37.500 3.24 3.24 0.00 2.32
2701 6793 5.240623 CACATAGTTAAAAGAAGGCACCACA 59.759 40.000 0.00 0.00 0.00 4.17
2703 6795 4.217550 GCACATAGTTAAAAGAAGGCACCA 59.782 41.667 0.00 0.00 0.00 4.17
2704 6796 4.217550 TGCACATAGTTAAAAGAAGGCACC 59.782 41.667 0.00 0.00 0.00 5.01
2705 6797 5.181245 TCTGCACATAGTTAAAAGAAGGCAC 59.819 40.000 0.00 0.00 0.00 5.01
2708 6800 6.038714 GGGATCTGCACATAGTTAAAAGAAGG 59.961 42.308 0.00 0.00 0.00 3.46
2719 6827 2.511659 CCATTGGGGATCTGCACATAG 58.488 52.381 0.00 0.00 40.01 2.23
2832 6940 3.611530 GCTAATGTTGTTGTTGATGGCGT 60.612 43.478 0.00 0.00 0.00 5.68
2850 6958 2.491897 TTATCGCCGCCTCCGCTAA 61.492 57.895 0.00 0.00 0.00 3.09
2856 6964 1.657794 GAGACGTTATCGCCGCCTC 60.658 63.158 0.00 0.00 41.18 4.70
2857 6965 2.412112 GAGACGTTATCGCCGCCT 59.588 61.111 0.00 0.00 41.18 5.52
2895 7003 0.607489 CTACTGCTGCAAAGCCAGGT 60.607 55.000 3.02 0.00 33.44 4.00
2897 7005 1.239296 TGCTACTGCTGCAAAGCCAG 61.239 55.000 25.14 8.17 40.48 4.85
2898 7006 0.822944 TTGCTACTGCTGCAAAGCCA 60.823 50.000 25.14 16.44 45.81 4.75
2955 7063 7.495901 TCAACATGTTTTTGGCTAAAATCTCA 58.504 30.769 8.77 9.20 37.98 3.27
2976 7084 8.398665 GTCACCAGGAATTCATAACTATTCAAC 58.601 37.037 7.93 0.00 33.43 3.18
2982 7090 4.161565 AGCGTCACCAGGAATTCATAACTA 59.838 41.667 7.93 0.00 0.00 2.24
2988 7096 1.071542 TGAAGCGTCACCAGGAATTCA 59.928 47.619 7.93 0.00 0.00 2.57
2991 7099 0.674895 GCTGAAGCGTCACCAGGAAT 60.675 55.000 0.00 0.00 0.00 3.01
2996 7104 1.146041 ACTTGCTGAAGCGTCACCA 59.854 52.632 0.00 0.00 45.83 4.17
2998 7106 0.041839 CACACTTGCTGAAGCGTCAC 60.042 55.000 0.00 0.00 45.83 3.67
3002 7110 1.280746 CACCACACTTGCTGAAGCG 59.719 57.895 0.00 0.00 45.83 4.68
3009 7117 1.338200 ACTAGCTAGCACCACACTTGC 60.338 52.381 20.91 0.00 40.52 4.01
3041 7149 1.983972 CACACTTAGACGACTCTGCC 58.016 55.000 0.00 0.00 0.00 4.85
3042 7150 1.341606 GCACACTTAGACGACTCTGC 58.658 55.000 0.00 0.00 0.00 4.26
3043 7151 1.542030 AGGCACACTTAGACGACTCTG 59.458 52.381 0.00 0.00 0.00 3.35
3090 7204 6.015180 ACATTGTTCCATCAGTTTTGCACTAT 60.015 34.615 0.00 0.00 32.76 2.12
3154 7268 0.319728 GAGAGAGCAGGTGACAAGCA 59.680 55.000 1.56 0.00 36.26 3.91
3245 7361 0.165944 GGCATCGTCACGTGAAAAGG 59.834 55.000 21.95 13.88 0.00 3.11
3304 7420 4.647853 ACACTAGACACACACTACAGGAAA 59.352 41.667 0.00 0.00 0.00 3.13
3308 7424 4.215613 TGCTACACTAGACACACACTACAG 59.784 45.833 0.00 0.00 0.00 2.74
3364 7487 5.209977 GTCCAAGTTTAACTTAGCGGTTTG 58.790 41.667 10.21 0.00 36.03 2.93
3366 7489 3.817084 GGTCCAAGTTTAACTTAGCGGTT 59.183 43.478 10.21 0.00 36.03 4.44
3370 7493 7.916914 TCATAAGGTCCAAGTTTAACTTAGC 57.083 36.000 10.21 5.93 36.03 3.09
3416 7539 5.479306 GCTCCGGTGCAAGATTTCTATATA 58.521 41.667 23.09 0.00 0.00 0.86
3417 7540 4.319177 GCTCCGGTGCAAGATTTCTATAT 58.681 43.478 23.09 0.00 0.00 0.86
3496 7627 6.864165 TGTTTTTCTTTTGCGGGTAACATATC 59.136 34.615 0.00 0.00 39.74 1.63
3498 7629 6.039493 TCTGTTTTTCTTTTGCGGGTAACATA 59.961 34.615 0.00 0.00 39.74 2.29
3522 7653 8.450578 TGAAATATTGTACCCAAGATGACATC 57.549 34.615 7.39 7.39 32.99 3.06
3533 7664 4.079958 ACCACCCTCTGAAATATTGTACCC 60.080 45.833 0.00 0.00 0.00 3.69
3534 7665 5.112129 ACCACCCTCTGAAATATTGTACC 57.888 43.478 0.00 0.00 0.00 3.34
3570 7701 7.042858 TCACACATGAATTTTTCCGAAATTGTG 60.043 33.333 0.00 10.74 32.23 3.33
3616 7747 5.891551 ACCGGCCTTAATTTGATATTCAAGT 59.108 36.000 0.00 0.00 37.70 3.16
3618 7749 5.451242 GCACCGGCCTTAATTTGATATTCAA 60.451 40.000 0.00 0.00 34.03 2.69
3630 7761 0.254462 TCATCATGCACCGGCCTTAA 59.746 50.000 0.00 0.00 40.13 1.85
3635 7766 2.774799 GGGTTCATCATGCACCGGC 61.775 63.158 0.00 0.00 34.37 6.13
3644 7775 5.009631 CCAAGTAGAAACATGGGTTCATCA 58.990 41.667 12.37 0.00 40.16 3.07
3670 7801 5.850557 AATGAAATAATCACGCAATGGGA 57.149 34.783 3.77 0.00 41.93 4.37
3687 7818 7.284261 TCACACCAAATGAGAAACAGTAATGAA 59.716 33.333 0.00 0.00 0.00 2.57
3688 7819 6.770303 TCACACCAAATGAGAAACAGTAATGA 59.230 34.615 0.00 0.00 0.00 2.57
3689 7820 6.969366 TCACACCAAATGAGAAACAGTAATG 58.031 36.000 0.00 0.00 0.00 1.90
3690 7821 7.765695 ATCACACCAAATGAGAAACAGTAAT 57.234 32.000 0.00 0.00 31.16 1.89
3691 7822 7.936847 AGTATCACACCAAATGAGAAACAGTAA 59.063 33.333 0.00 0.00 31.16 2.24
3692 7823 7.450074 AGTATCACACCAAATGAGAAACAGTA 58.550 34.615 0.00 0.00 31.16 2.74
3693 7824 6.299141 AGTATCACACCAAATGAGAAACAGT 58.701 36.000 0.00 0.00 31.16 3.55
3694 7825 6.808008 AGTATCACACCAAATGAGAAACAG 57.192 37.500 0.00 0.00 31.16 3.16
3695 7826 8.321353 AGATAGTATCACACCAAATGAGAAACA 58.679 33.333 12.66 0.00 31.16 2.83
3696 7827 8.723942 AGATAGTATCACACCAAATGAGAAAC 57.276 34.615 12.66 0.00 31.16 2.78
3697 7828 9.166173 CAAGATAGTATCACACCAAATGAGAAA 57.834 33.333 12.66 0.00 31.16 2.52
3698 7829 8.321353 ACAAGATAGTATCACACCAAATGAGAA 58.679 33.333 12.66 0.00 31.16 2.87
3699 7830 7.851228 ACAAGATAGTATCACACCAAATGAGA 58.149 34.615 12.66 0.00 32.01 3.27
3700 7831 7.984050 AGACAAGATAGTATCACACCAAATGAG 59.016 37.037 12.66 0.00 0.00 2.90
3701 7832 7.851228 AGACAAGATAGTATCACACCAAATGA 58.149 34.615 12.66 0.00 0.00 2.57
3702 7833 9.599866 TTAGACAAGATAGTATCACACCAAATG 57.400 33.333 12.66 1.67 0.00 2.32
3705 7836 9.599866 CAATTAGACAAGATAGTATCACACCAA 57.400 33.333 12.66 0.35 0.00 3.67
3706 7837 8.204160 CCAATTAGACAAGATAGTATCACACCA 58.796 37.037 12.66 0.00 0.00 4.17
3707 7838 7.657761 CCCAATTAGACAAGATAGTATCACACC 59.342 40.741 12.66 0.00 0.00 4.16
3708 7839 8.204836 ACCCAATTAGACAAGATAGTATCACAC 58.795 37.037 12.66 1.64 0.00 3.82
3709 7840 8.319057 ACCCAATTAGACAAGATAGTATCACA 57.681 34.615 12.66 0.00 0.00 3.58
3715 7846 7.980099 CGAACTAACCCAATTAGACAAGATAGT 59.020 37.037 0.81 0.00 42.75 2.12
3716 7847 8.195436 TCGAACTAACCCAATTAGACAAGATAG 58.805 37.037 0.81 0.00 42.75 2.08
3717 7848 7.977853 GTCGAACTAACCCAATTAGACAAGATA 59.022 37.037 0.81 0.00 42.75 1.98
3718 7849 6.817140 GTCGAACTAACCCAATTAGACAAGAT 59.183 38.462 0.81 0.00 42.75 2.40
3719 7850 6.161381 GTCGAACTAACCCAATTAGACAAGA 58.839 40.000 0.81 0.00 42.75 3.02
3720 7851 5.929992 TGTCGAACTAACCCAATTAGACAAG 59.070 40.000 0.81 0.00 42.75 3.16
3721 7852 5.856156 TGTCGAACTAACCCAATTAGACAA 58.144 37.500 0.81 0.00 42.75 3.18
3722 7853 5.471556 TGTCGAACTAACCCAATTAGACA 57.528 39.130 0.81 0.00 42.75 3.41
3723 7854 6.426025 AGTTTGTCGAACTAACCCAATTAGAC 59.574 38.462 3.44 0.00 46.61 2.59
3724 7855 6.527423 AGTTTGTCGAACTAACCCAATTAGA 58.473 36.000 3.44 0.00 46.61 2.10
3725 7856 6.796705 AGTTTGTCGAACTAACCCAATTAG 57.203 37.500 3.44 0.00 46.61 1.73
3741 7872 3.723348 GCGTGCCCCGAGTTTGTC 61.723 66.667 0.00 0.00 39.56 3.18
3742 7873 4.555709 TGCGTGCCCCGAGTTTGT 62.556 61.111 0.00 0.00 39.56 2.83
3743 7874 4.025401 GTGCGTGCCCCGAGTTTG 62.025 66.667 0.00 0.00 39.56 2.93
3764 7895 3.026223 TATGCATGTGGGCCCCCA 61.026 61.111 22.27 16.45 45.02 4.96
3765 7896 2.521708 GTATGCATGTGGGCCCCC 60.522 66.667 22.27 8.90 0.00 5.40
3766 7897 2.906897 CGTATGCATGTGGGCCCC 60.907 66.667 22.27 11.72 0.00 5.80
3767 7898 2.906897 CCGTATGCATGTGGGCCC 60.907 66.667 17.59 17.59 0.00 5.80
3768 7899 3.595758 GCCGTATGCATGTGGGCC 61.596 66.667 20.60 0.00 40.77 5.80
3769 7900 3.595758 GGCCGTATGCATGTGGGC 61.596 66.667 23.48 23.48 43.89 5.36
3770 7901 1.518056 GATGGCCGTATGCATGTGGG 61.518 60.000 10.16 8.75 43.89 4.61
3771 7902 1.518056 GGATGGCCGTATGCATGTGG 61.518 60.000 10.16 12.00 43.89 4.17
3772 7903 0.818852 TGGATGGCCGTATGCATGTG 60.819 55.000 10.16 0.76 43.89 3.21
3773 7904 0.111061 ATGGATGGCCGTATGCATGT 59.889 50.000 10.16 0.00 43.89 3.21
3774 7905 1.250328 AATGGATGGCCGTATGCATG 58.750 50.000 10.16 0.00 43.89 4.06
3775 7906 1.614903 CAAATGGATGGCCGTATGCAT 59.385 47.619 3.79 3.79 43.89 3.96
3776 7907 1.031235 CAAATGGATGGCCGTATGCA 58.969 50.000 0.00 0.00 43.89 3.96
3777 7908 0.318955 GCAAATGGATGGCCGTATGC 60.319 55.000 0.00 0.17 36.79 3.14
3778 7909 1.321474 AGCAAATGGATGGCCGTATG 58.679 50.000 0.00 0.00 36.79 2.39
3779 7910 1.956477 GAAGCAAATGGATGGCCGTAT 59.044 47.619 0.00 0.00 36.79 3.06
3780 7911 1.340502 TGAAGCAAATGGATGGCCGTA 60.341 47.619 0.00 0.00 36.79 4.02
3781 7912 0.611618 TGAAGCAAATGGATGGCCGT 60.612 50.000 0.00 0.00 36.79 5.68
3782 7913 0.531657 TTGAAGCAAATGGATGGCCG 59.468 50.000 0.00 0.00 36.79 6.13
3783 7914 1.826720 TCTTGAAGCAAATGGATGGCC 59.173 47.619 0.00 0.00 0.00 5.36
3784 7915 3.454375 CATCTTGAAGCAAATGGATGGC 58.546 45.455 0.00 0.00 0.00 4.40
3785 7916 3.454375 GCATCTTGAAGCAAATGGATGG 58.546 45.455 0.00 0.00 29.87 3.51
3786 7917 3.132289 AGGCATCTTGAAGCAAATGGATG 59.868 43.478 0.41 0.00 31.29 3.51
3787 7918 3.132289 CAGGCATCTTGAAGCAAATGGAT 59.868 43.478 0.41 0.00 0.00 3.41
3788 7919 2.494471 CAGGCATCTTGAAGCAAATGGA 59.506 45.455 0.41 0.00 0.00 3.41
3789 7920 2.888594 CAGGCATCTTGAAGCAAATGG 58.111 47.619 0.41 0.00 0.00 3.16
3790 7921 2.268298 GCAGGCATCTTGAAGCAAATG 58.732 47.619 0.41 0.00 0.00 2.32
3791 7922 1.206371 GGCAGGCATCTTGAAGCAAAT 59.794 47.619 0.41 0.00 0.00 2.32
3792 7923 0.604578 GGCAGGCATCTTGAAGCAAA 59.395 50.000 0.41 0.00 0.00 3.68
3793 7924 1.252904 GGGCAGGCATCTTGAAGCAA 61.253 55.000 0.00 0.00 0.00 3.91
3794 7925 1.679977 GGGCAGGCATCTTGAAGCA 60.680 57.895 0.00 0.00 0.00 3.91
3795 7926 2.768492 CGGGCAGGCATCTTGAAGC 61.768 63.158 0.00 0.00 0.00 3.86
3796 7927 2.768492 GCGGGCAGGCATCTTGAAG 61.768 63.158 0.00 0.00 0.00 3.02
3797 7928 2.751436 GCGGGCAGGCATCTTGAA 60.751 61.111 0.00 0.00 0.00 2.69
3798 7929 4.032452 TGCGGGCAGGCATCTTGA 62.032 61.111 0.00 0.00 38.17 3.02
3799 7930 3.818787 GTGCGGGCAGGCATCTTG 61.819 66.667 5.75 0.00 45.99 3.02
3800 7931 3.984193 GAGTGCGGGCAGGCATCTT 62.984 63.158 5.75 0.00 45.99 2.40
3801 7932 4.479993 GAGTGCGGGCAGGCATCT 62.480 66.667 5.75 5.42 45.99 2.90
3807 7938 3.950794 TTTAGGCGAGTGCGGGCAG 62.951 63.158 0.00 0.00 44.10 4.85
3808 7939 3.538785 TTTTAGGCGAGTGCGGGCA 62.539 57.895 0.00 0.00 44.10 5.36
3809 7940 2.329614 TTTTTAGGCGAGTGCGGGC 61.330 57.895 0.00 0.00 44.10 6.13
3810 7941 3.975246 TTTTTAGGCGAGTGCGGG 58.025 55.556 0.00 0.00 44.10 6.13
3825 7956 1.059006 TTGTGGGGGCAGGCATTTTT 61.059 50.000 0.00 0.00 0.00 1.94
3826 7957 1.461075 TTGTGGGGGCAGGCATTTT 60.461 52.632 0.00 0.00 0.00 1.82
3827 7958 2.203750 TTGTGGGGGCAGGCATTT 59.796 55.556 0.00 0.00 0.00 2.32
3828 7959 2.604382 GTTGTGGGGGCAGGCATT 60.604 61.111 0.00 0.00 0.00 3.56
3829 7960 3.593680 AGTTGTGGGGGCAGGCAT 61.594 61.111 0.00 0.00 0.00 4.40
3830 7961 4.601794 CAGTTGTGGGGGCAGGCA 62.602 66.667 0.00 0.00 0.00 4.75
3831 7962 4.603535 ACAGTTGTGGGGGCAGGC 62.604 66.667 0.00 0.00 0.00 4.85
3832 7963 2.198426 AACAGTTGTGGGGGCAGG 59.802 61.111 0.00 0.00 0.00 4.85
3833 7964 1.455383 GACAACAGTTGTGGGGGCAG 61.455 60.000 23.94 0.00 45.52 4.85
3834 7965 1.454847 GACAACAGTTGTGGGGGCA 60.455 57.895 23.94 0.00 45.52 5.36
3835 7966 2.551912 CGACAACAGTTGTGGGGGC 61.552 63.158 23.94 7.76 45.52 5.80
3836 7967 0.884704 CTCGACAACAGTTGTGGGGG 60.885 60.000 23.94 11.21 45.52 5.40
3837 7968 1.507141 GCTCGACAACAGTTGTGGGG 61.507 60.000 23.94 22.30 45.52 4.96
3838 7969 0.532862 AGCTCGACAACAGTTGTGGG 60.533 55.000 23.94 15.73 45.52 4.61
3839 7970 0.861837 GAGCTCGACAACAGTTGTGG 59.138 55.000 23.94 21.54 45.52 4.17
3840 7971 1.570813 TGAGCTCGACAACAGTTGTG 58.429 50.000 23.94 14.99 45.52 3.33
3842 7973 2.156504 GTCATGAGCTCGACAACAGTTG 59.843 50.000 12.03 12.03 32.24 3.16
3843 7974 2.408050 GTCATGAGCTCGACAACAGTT 58.592 47.619 14.67 0.00 32.24 3.16
3844 7975 1.667177 CGTCATGAGCTCGACAACAGT 60.667 52.381 18.21 0.00 32.24 3.55
3845 7976 0.987715 CGTCATGAGCTCGACAACAG 59.012 55.000 18.21 2.51 32.24 3.16
3846 7977 0.388520 CCGTCATGAGCTCGACAACA 60.389 55.000 18.21 0.00 32.24 3.33
3847 7978 1.687494 GCCGTCATGAGCTCGACAAC 61.687 60.000 18.21 9.53 32.24 3.32
3848 7979 1.446099 GCCGTCATGAGCTCGACAA 60.446 57.895 18.21 0.00 32.24 3.18
3849 7980 2.181777 GCCGTCATGAGCTCGACA 59.818 61.111 18.21 0.00 32.24 4.35
3850 7981 2.951745 CGCCGTCATGAGCTCGAC 60.952 66.667 9.64 10.27 0.00 4.20
3851 7982 4.854784 GCGCCGTCATGAGCTCGA 62.855 66.667 9.64 0.00 0.00 4.04
3853 7984 4.819761 TGGCGCCGTCATGAGCTC 62.820 66.667 23.90 6.82 0.00 4.09
3856 7987 4.457496 AGGTGGCGCCGTCATGAG 62.457 66.667 23.90 0.00 43.70 2.90
3857 7988 4.758251 CAGGTGGCGCCGTCATGA 62.758 66.667 24.59 4.00 43.70 3.07
3864 7995 4.101448 ATGAGACCAGGTGGCGCC 62.101 66.667 22.73 22.73 39.32 6.53
3865 7996 2.512515 GATGAGACCAGGTGGCGC 60.513 66.667 0.00 0.00 39.32 6.53
3866 7997 2.021068 ATCGATGAGACCAGGTGGCG 62.021 60.000 0.00 0.00 39.32 5.69
3867 7998 0.179000 AATCGATGAGACCAGGTGGC 59.821 55.000 0.00 0.00 39.32 5.01
3868 7999 1.202580 GGAATCGATGAGACCAGGTGG 60.203 57.143 0.00 0.00 42.17 4.61
3869 8000 1.482182 TGGAATCGATGAGACCAGGTG 59.518 52.381 0.00 0.00 0.00 4.00
3870 8001 1.759445 CTGGAATCGATGAGACCAGGT 59.241 52.381 22.33 0.00 42.77 4.00
3871 8002 1.539929 GCTGGAATCGATGAGACCAGG 60.540 57.143 26.83 16.59 45.45 4.45
3873 8004 0.465705 GGCTGGAATCGATGAGACCA 59.534 55.000 0.00 6.22 0.00 4.02
3874 8005 0.755686 AGGCTGGAATCGATGAGACC 59.244 55.000 0.00 1.45 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.