Multiple sequence alignment - TraesCS7A01G501000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G501000 chr7A 100.000 2504 0 0 1 2504 690919491 690916988 0.000000e+00 4625.0
1 TraesCS7A01G501000 chr7A 95.115 737 34 2 795 1531 690930465 690929731 0.000000e+00 1160.0
2 TraesCS7A01G501000 chr7A 95.604 182 6 2 2325 2504 393657149 393656968 8.760000e-75 291.0
3 TraesCS7A01G501000 chr7A 75.281 267 41 17 2 260 690933009 690932760 1.230000e-18 104.0
4 TraesCS7A01G501000 chr7D 84.290 1655 172 39 2 1606 598486642 598485026 0.000000e+00 1535.0
5 TraesCS7A01G501000 chr7D 86.260 917 87 24 616 1512 598497441 598496544 0.000000e+00 959.0
6 TraesCS7A01G501000 chr7D 91.829 257 20 1 1248 1504 598437864 598437609 8.520000e-95 357.0
7 TraesCS7A01G501000 chr7D 75.191 262 49 9 2 260 598499757 598499509 2.630000e-20 110.0
8 TraesCS7A01G501000 chr7B 81.897 1276 164 32 3 1253 677539752 677538519 0.000000e+00 1014.0
9 TraesCS7A01G501000 chr7B 89.764 762 56 15 786 1543 677668142 677667399 0.000000e+00 955.0
10 TraesCS7A01G501000 chr7B 83.465 635 63 20 1 615 677644086 677643474 1.010000e-153 553.0
11 TraesCS7A01G501000 chr7B 90.659 364 25 7 1248 1606 677538484 677538125 2.250000e-130 475.0
12 TraesCS7A01G501000 chr7B 84.407 481 41 14 1248 1711 677522665 677522202 2.290000e-120 442.0
13 TraesCS7A01G501000 chr7B 88.304 342 35 3 1249 1588 677508024 677507686 3.000000e-109 405.0
14 TraesCS7A01G501000 chr7B 84.946 372 43 9 786 1154 677690322 677689961 5.090000e-97 364.0
15 TraesCS7A01G501000 chr7B 86.058 208 13 4 1666 1867 677538023 677537826 2.520000e-50 209.0
16 TraesCS7A01G501000 chr7B 76.303 211 36 7 2 210 677695030 677694832 1.580000e-17 100.0
17 TraesCS7A01G501000 chr7B 82.759 87 13 2 175 260 677670503 677670418 2.670000e-10 76.8
18 TraesCS7A01G501000 chr5D 81.070 729 93 30 797 1505 125738156 125737453 7.880000e-150 540.0
19 TraesCS7A01G501000 chr6A 96.111 180 6 1 2326 2504 68815671 68815850 2.440000e-75 292.0
20 TraesCS7A01G501000 chr6A 76.733 404 68 20 797 1199 609983567 609983189 4.220000e-48 202.0
21 TraesCS7A01G501000 chr1A 96.111 180 5 2 2326 2504 568719514 568719336 2.440000e-75 292.0
22 TraesCS7A01G501000 chr1A 95.556 180 6 2 2326 2504 568721086 568720908 1.130000e-73 287.0
23 TraesCS7A01G501000 chr1A 91.129 124 11 0 2031 2154 587825730 587825607 4.280000e-38 169.0
24 TraesCS7A01G501000 chr5B 96.591 176 5 1 2330 2504 158882506 158882681 8.760000e-75 291.0
25 TraesCS7A01G501000 chr5B 90.840 131 11 1 2029 2158 7206920 7206790 9.210000e-40 174.0
26 TraesCS7A01G501000 chr5B 90.551 127 12 0 2029 2155 399773846 399773720 4.280000e-38 169.0
27 TraesCS7A01G501000 chr3B 95.135 185 8 1 2321 2504 798421460 798421644 8.760000e-75 291.0
28 TraesCS7A01G501000 chr3B 94.783 115 6 0 2029 2143 150277123 150277009 1.980000e-41 180.0
29 TraesCS7A01G501000 chr3A 95.628 183 5 2 2323 2504 591391088 591390908 8.760000e-75 291.0
30 TraesCS7A01G501000 chr3A 95.082 183 7 2 2323 2504 558290176 558289995 1.130000e-73 287.0
31 TraesCS7A01G501000 chr2B 95.580 181 7 1 2325 2504 489386905 489387085 3.150000e-74 289.0
32 TraesCS7A01G501000 chr2B 94.783 115 6 0 2029 2143 476094678 476094792 1.980000e-41 180.0
33 TraesCS7A01G501000 chr4A 92.308 156 11 1 1047 1201 574385236 574385081 1.170000e-53 220.0
34 TraesCS7A01G501000 chr4B 91.667 156 12 1 1047 1201 41743706 41743861 5.420000e-52 215.0
35 TraesCS7A01G501000 chr4B 90.076 131 12 1 2029 2158 622073797 622073927 4.280000e-38 169.0
36 TraesCS7A01G501000 chr2D 78.529 340 63 9 1 335 47680634 47680300 5.420000e-52 215.0
37 TraesCS7A01G501000 chr2D 79.452 219 30 9 1 208 47686253 47686039 9.340000e-30 141.0
38 TraesCS7A01G501000 chr6D 85.263 190 19 4 1010 1199 463478945 463478765 1.180000e-43 187.0
39 TraesCS7A01G501000 chr5A 94.783 115 6 0 2029 2143 566644386 566644272 1.980000e-41 180.0
40 TraesCS7A01G501000 chr5A 94.690 113 6 0 2031 2143 500624199 500624311 2.560000e-40 176.0
41 TraesCS7A01G501000 chrUn 93.913 115 7 0 2029 2143 233146158 233146044 9.210000e-40 174.0
42 TraesCS7A01G501000 chr6B 91.379 58 4 1 798 855 706747603 706747547 7.430000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G501000 chr7A 690916988 690919491 2503 True 4625.0 4625 100.000000 1 2504 1 chr7A.!!$R2 2503
1 TraesCS7A01G501000 chr7A 690929731 690933009 3278 True 632.0 1160 85.198000 2 1531 2 chr7A.!!$R3 1529
2 TraesCS7A01G501000 chr7D 598485026 598486642 1616 True 1535.0 1535 84.290000 2 1606 1 chr7D.!!$R2 1604
3 TraesCS7A01G501000 chr7D 598496544 598499757 3213 True 534.5 959 80.725500 2 1512 2 chr7D.!!$R3 1510
4 TraesCS7A01G501000 chr7B 677537826 677539752 1926 True 566.0 1014 86.204667 3 1867 3 chr7B.!!$R6 1864
5 TraesCS7A01G501000 chr7B 677643474 677644086 612 True 553.0 553 83.465000 1 615 1 chr7B.!!$R3 614
6 TraesCS7A01G501000 chr7B 677667399 677670503 3104 True 515.9 955 86.261500 175 1543 2 chr7B.!!$R7 1368
7 TraesCS7A01G501000 chr5D 125737453 125738156 703 True 540.0 540 81.070000 797 1505 1 chr5D.!!$R1 708
8 TraesCS7A01G501000 chr1A 568719336 568721086 1750 True 289.5 292 95.833500 2326 2504 2 chr1A.!!$R2 178

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 2191 0.038892 GTAGCAAACCTCCGTGTCGA 60.039 55.0 0.0 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1907 5622 0.030773 TCACGCATAGCCGATGAGAC 59.969 55.0 6.9 0.0 37.53 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 1785 5.276395 CGCCAACATAAGTTATCTTCGAGTG 60.276 44.000 0.00 0.00 35.85 3.51
65 1799 0.817654 CGAGTGAGCTGGTCATGGTA 59.182 55.000 13.18 0.00 37.56 3.25
72 1808 4.100189 GTGAGCTGGTCATGGTAGATAGTT 59.900 45.833 13.18 0.00 37.56 2.24
218 1966 9.595823 GAAATGATTAGCTTGTAGTACCAGTTA 57.404 33.333 0.00 0.00 0.00 2.24
223 1971 3.442977 AGCTTGTAGTACCAGTTAGTCCG 59.557 47.826 3.54 0.00 0.00 4.79
225 1973 3.439857 TGTAGTACCAGTTAGTCCGGT 57.560 47.619 0.00 0.00 36.79 5.28
234 1982 0.743345 GTTAGTCCGGTGGTGCATCC 60.743 60.000 0.00 0.00 0.00 3.51
261 2010 5.461078 GCTGCATCATTATTCCACAATGTTC 59.539 40.000 0.00 0.00 35.36 3.18
271 2028 1.876799 CCACAATGTTCGGCTGTACAA 59.123 47.619 9.20 0.00 0.00 2.41
274 2031 4.335315 CCACAATGTTCGGCTGTACAATAT 59.665 41.667 9.20 0.00 0.00 1.28
282 2039 2.290641 CGGCTGTACAATATCTTTGGCC 59.709 50.000 0.00 0.00 0.00 5.36
290 2047 1.680338 ATATCTTTGGCCTCCGCAAC 58.320 50.000 3.32 0.00 36.38 4.17
302 2059 3.146783 CCGCAACGGGATGTAGAAA 57.853 52.632 0.00 0.00 44.15 2.52
352 2144 0.689055 GGTTGGTAAAGGGACTCCGT 59.311 55.000 0.00 0.00 38.49 4.69
353 2145 1.609841 GGTTGGTAAAGGGACTCCGTG 60.610 57.143 0.00 0.00 38.49 4.94
354 2146 1.071228 GTTGGTAAAGGGACTCCGTGT 59.929 52.381 0.00 0.00 38.49 4.49
364 2159 1.808945 GGACTCCGTGTCGAAGAACTA 59.191 52.381 0.00 0.00 46.24 2.24
367 2162 3.668447 ACTCCGTGTCGAAGAACTACTA 58.332 45.455 0.00 0.00 39.69 1.82
369 2164 5.423015 ACTCCGTGTCGAAGAACTACTATA 58.577 41.667 0.00 0.00 39.69 1.31
374 2169 6.202379 CCGTGTCGAAGAACTACTATATCTCA 59.798 42.308 0.00 0.00 39.69 3.27
389 2184 7.445945 ACTATATCTCATTGTAGCAAACCTCC 58.554 38.462 0.00 0.00 0.00 4.30
390 2185 2.972625 TCTCATTGTAGCAAACCTCCG 58.027 47.619 0.00 0.00 0.00 4.63
391 2186 2.301870 TCTCATTGTAGCAAACCTCCGT 59.698 45.455 0.00 0.00 0.00 4.69
392 2187 2.416547 CTCATTGTAGCAAACCTCCGTG 59.583 50.000 0.00 0.00 0.00 4.94
393 2188 2.151202 CATTGTAGCAAACCTCCGTGT 58.849 47.619 0.00 0.00 0.00 4.49
394 2189 1.873698 TTGTAGCAAACCTCCGTGTC 58.126 50.000 0.00 0.00 0.00 3.67
396 2191 0.038892 GTAGCAAACCTCCGTGTCGA 60.039 55.000 0.00 0.00 0.00 4.20
397 2192 0.675083 TAGCAAACCTCCGTGTCGAA 59.325 50.000 0.00 0.00 0.00 3.71
398 2193 0.600255 AGCAAACCTCCGTGTCGAAG 60.600 55.000 0.00 0.00 0.00 3.79
400 2195 1.860676 CAAACCTCCGTGTCGAAGAA 58.139 50.000 0.00 0.00 39.69 2.52
402 2197 2.806244 CAAACCTCCGTGTCGAAGAATT 59.194 45.455 0.00 0.00 39.69 2.17
403 2198 3.947910 AACCTCCGTGTCGAAGAATTA 57.052 42.857 0.00 0.00 39.69 1.40
404 2199 3.227810 ACCTCCGTGTCGAAGAATTAC 57.772 47.619 0.00 0.00 39.69 1.89
405 2200 2.824341 ACCTCCGTGTCGAAGAATTACT 59.176 45.455 0.00 0.00 39.69 2.24
406 2201 4.012374 ACCTCCGTGTCGAAGAATTACTA 58.988 43.478 0.00 0.00 39.69 1.82
407 2202 4.643784 ACCTCCGTGTCGAAGAATTACTAT 59.356 41.667 0.00 0.00 39.69 2.12
408 2203 5.824624 ACCTCCGTGTCGAAGAATTACTATA 59.175 40.000 0.00 0.00 39.69 1.31
409 2204 6.489361 ACCTCCGTGTCGAAGAATTACTATAT 59.511 38.462 0.00 0.00 39.69 0.86
436 3454 1.214367 GTCAGCGAAACTCGAAACCA 58.786 50.000 0.00 0.00 43.74 3.67
446 3464 1.279271 ACTCGAAACCAATCTCCCCTG 59.721 52.381 0.00 0.00 0.00 4.45
452 3476 2.629017 ACCAATCTCCCCTGCAAAAT 57.371 45.000 0.00 0.00 0.00 1.82
453 3477 3.756082 ACCAATCTCCCCTGCAAAATA 57.244 42.857 0.00 0.00 0.00 1.40
454 3478 4.059773 ACCAATCTCCCCTGCAAAATAA 57.940 40.909 0.00 0.00 0.00 1.40
455 3479 4.424842 ACCAATCTCCCCTGCAAAATAAA 58.575 39.130 0.00 0.00 0.00 1.40
456 3480 4.843516 ACCAATCTCCCCTGCAAAATAAAA 59.156 37.500 0.00 0.00 0.00 1.52
457 3481 5.309282 ACCAATCTCCCCTGCAAAATAAAAA 59.691 36.000 0.00 0.00 0.00 1.94
466 3836 7.497579 TCCCCTGCAAAATAAAAAGAAAGAAAC 59.502 33.333 0.00 0.00 0.00 2.78
540 4062 4.394729 TGGGACCAAATCAAGTGAACTAC 58.605 43.478 0.00 0.00 0.00 2.73
541 4063 4.104102 TGGGACCAAATCAAGTGAACTACT 59.896 41.667 0.00 0.00 42.89 2.57
542 4064 5.308497 TGGGACCAAATCAAGTGAACTACTA 59.692 40.000 0.00 0.00 39.18 1.82
629 4173 0.386838 GCATCAGCCTAAACCCATGC 59.613 55.000 0.00 0.00 33.58 4.06
657 4208 1.597302 CTGGATGCATCGGCTCTGG 60.597 63.158 20.15 1.90 41.91 3.86
673 4224 4.452733 GGAACGGACGGCAGGAGG 62.453 72.222 0.00 0.00 0.00 4.30
684 4235 2.681778 CAGGAGGCCTGTCCGACT 60.682 66.667 12.00 0.00 45.82 4.18
702 4253 2.486982 GACTAACGGCTAGCATCGGATA 59.513 50.000 18.24 8.63 0.00 2.59
707 4258 0.171455 GGCTAGCATCGGATAGACGG 59.829 60.000 18.24 0.00 34.96 4.79
725 4276 6.309389 AGACGGTTTCCCTCATTTAGTTAT 57.691 37.500 0.00 0.00 0.00 1.89
727 4278 6.598064 AGACGGTTTCCCTCATTTAGTTATTG 59.402 38.462 0.00 0.00 0.00 1.90
730 4281 6.127730 CGGTTTCCCTCATTTAGTTATTGCTT 60.128 38.462 0.00 0.00 0.00 3.91
731 4282 7.576856 CGGTTTCCCTCATTTAGTTATTGCTTT 60.577 37.037 0.00 0.00 0.00 3.51
732 4283 8.094548 GGTTTCCCTCATTTAGTTATTGCTTTT 58.905 33.333 0.00 0.00 0.00 2.27
733 4284 9.140286 GTTTCCCTCATTTAGTTATTGCTTTTC 57.860 33.333 0.00 0.00 0.00 2.29
734 4285 8.650143 TTCCCTCATTTAGTTATTGCTTTTCT 57.350 30.769 0.00 0.00 0.00 2.52
735 4286 8.055279 TCCCTCATTTAGTTATTGCTTTTCTG 57.945 34.615 0.00 0.00 0.00 3.02
737 4288 7.315142 CCTCATTTAGTTATTGCTTTTCTGCA 58.685 34.615 0.00 0.00 41.65 4.41
755 4306 1.933052 GCAAAAATTTCCCGTCACCCG 60.933 52.381 0.00 0.00 0.00 5.28
767 4318 1.816224 CGTCACCCGAAATTCCCAATT 59.184 47.619 0.00 0.00 39.56 2.32
776 4327 0.173255 AATTCCCAATTCGCGCCAAG 59.827 50.000 0.00 0.00 0.00 3.61
788 4403 2.981350 GCCAAGCCCGACGGAAAA 60.981 61.111 17.49 0.00 0.00 2.29
790 4405 1.800681 CCAAGCCCGACGGAAAATC 59.199 57.895 17.49 0.00 0.00 2.17
800 4415 3.007542 GGAAAATCCGGCTCCCCT 58.992 61.111 0.00 0.00 0.00 4.79
868 4484 3.690628 CCGCCTCCCGTTCTTTTTATAAA 59.309 43.478 0.00 0.00 34.38 1.40
924 4541 4.785453 CCTGCGCCCTCCACCTTC 62.785 72.222 4.18 0.00 0.00 3.46
1258 4920 0.611896 TCACTCTGGATCTCACCGCA 60.612 55.000 0.00 0.00 0.00 5.69
1531 5196 6.595682 AGATTAGTATGGTCCTTGTGAATGG 58.404 40.000 0.00 0.00 0.00 3.16
1533 5198 4.222124 AGTATGGTCCTTGTGAATGGTC 57.778 45.455 0.00 0.00 0.00 4.02
1540 5206 2.176798 TCCTTGTGAATGGTCTGGGTTT 59.823 45.455 0.00 0.00 0.00 3.27
1552 5218 0.874390 CTGGGTTTGTGTGTCATCGG 59.126 55.000 0.00 0.00 0.00 4.18
1555 5221 1.588674 GGTTTGTGTGTCATCGGTGA 58.411 50.000 0.00 0.00 0.00 4.02
1573 5240 1.710244 TGACCATGGTGGATCTGGTTT 59.290 47.619 25.52 0.00 43.23 3.27
1577 5244 2.493278 CCATGGTGGATCTGGTTTGAAC 59.507 50.000 2.57 0.00 40.96 3.18
1581 5248 2.500229 GTGGATCTGGTTTGAACGGAA 58.500 47.619 0.00 0.00 0.00 4.30
1607 5294 2.723010 GCTCGCAATCTTGTTCTTGTCG 60.723 50.000 0.00 0.00 0.00 4.35
1608 5295 2.731451 CTCGCAATCTTGTTCTTGTCGA 59.269 45.455 0.00 0.00 33.37 4.20
1617 5304 4.870426 TCTTGTTCTTGTCGATGCTAATCC 59.130 41.667 0.00 0.00 0.00 3.01
1618 5305 3.186909 TGTTCTTGTCGATGCTAATCCG 58.813 45.455 0.00 0.00 0.00 4.18
1620 5307 0.504384 CTTGTCGATGCTAATCCGCG 59.496 55.000 0.00 0.00 0.00 6.46
1629 5316 1.079875 GCTAATCCGCGTGAAACCGA 61.080 55.000 4.92 0.00 33.32 4.69
1630 5317 0.921347 CTAATCCGCGTGAAACCGAG 59.079 55.000 4.92 0.00 33.32 4.63
1631 5318 0.527113 TAATCCGCGTGAAACCGAGA 59.473 50.000 4.92 0.00 33.32 4.04
1633 5320 0.806102 ATCCGCGTGAAACCGAGATG 60.806 55.000 4.92 0.00 33.32 2.90
1634 5321 2.395690 CGCGTGAAACCGAGATGC 59.604 61.111 0.00 0.00 33.32 3.91
1635 5322 2.094659 CGCGTGAAACCGAGATGCT 61.095 57.895 0.00 0.00 33.32 3.79
1637 5324 0.645868 GCGTGAAACCGAGATGCTAC 59.354 55.000 0.00 0.00 0.00 3.58
1638 5325 1.278238 CGTGAAACCGAGATGCTACC 58.722 55.000 0.00 0.00 0.00 3.18
1639 5326 1.278238 GTGAAACCGAGATGCTACCG 58.722 55.000 0.00 0.00 0.00 4.02
1642 5329 0.249398 AAACCGAGATGCTACCGCTT 59.751 50.000 0.00 0.00 36.97 4.68
1643 5330 0.249398 AACCGAGATGCTACCGCTTT 59.751 50.000 0.00 0.00 36.97 3.51
1645 5332 0.103208 CCGAGATGCTACCGCTTTCT 59.897 55.000 0.00 0.00 36.97 2.52
1646 5333 1.482278 CGAGATGCTACCGCTTTCTC 58.518 55.000 0.00 0.00 40.05 2.87
1647 5334 1.859383 GAGATGCTACCGCTTTCTCC 58.141 55.000 0.00 0.00 38.78 3.71
1649 5336 0.179108 GATGCTACCGCTTTCTCCGT 60.179 55.000 0.00 0.00 36.97 4.69
1651 5338 1.872679 GCTACCGCTTTCTCCGTCG 60.873 63.158 0.00 0.00 0.00 5.12
1652 5339 1.872679 CTACCGCTTTCTCCGTCGC 60.873 63.158 0.00 0.00 0.00 5.19
1653 5340 2.267681 CTACCGCTTTCTCCGTCGCT 62.268 60.000 0.00 0.00 0.00 4.93
1654 5341 2.262471 TACCGCTTTCTCCGTCGCTC 62.262 60.000 0.00 0.00 0.00 5.03
1658 5367 0.164002 GCTTTCTCCGTCGCTCAAAC 59.836 55.000 0.00 0.00 0.00 2.93
1660 5369 0.942410 TTTCTCCGTCGCTCAAACCG 60.942 55.000 0.00 0.00 0.00 4.44
1663 5372 3.411351 CCGTCGCTCAAACCGTGG 61.411 66.667 0.00 0.00 0.00 4.94
1664 5373 4.072088 CGTCGCTCAAACCGTGGC 62.072 66.667 0.00 0.00 0.00 5.01
1670 5379 1.725066 CTCAAACCGTGGCGTGTTT 59.275 52.632 0.00 0.00 33.29 2.83
1731 5446 2.185350 CTGTAGCACTGAGGCGGG 59.815 66.667 0.00 0.00 39.27 6.13
1738 5453 2.603473 ACTGAGGCGGGCACTACA 60.603 61.111 3.78 0.00 0.00 2.74
1749 5464 2.922950 GCACTACACGTGTCCGGGA 61.923 63.158 27.16 6.15 45.57 5.14
1754 5469 1.526575 TACACGTGTCCGGGACTTCC 61.527 60.000 27.16 13.84 41.01 3.46
1805 5520 2.050351 CGGCGACACTCTCGTTGT 60.050 61.111 0.00 0.00 44.92 3.32
1835 5550 4.380986 TGGTCGGCCATCTCTCAT 57.619 55.556 3.51 0.00 40.46 2.90
1836 5551 2.127839 TGGTCGGCCATCTCTCATC 58.872 57.895 3.51 0.00 40.46 2.92
1838 5553 1.006805 GTCGGCCATCTCTCATCGG 60.007 63.158 2.24 0.00 0.00 4.18
1839 5554 2.356793 CGGCCATCTCTCATCGGC 60.357 66.667 2.24 0.00 44.10 5.54
1841 5556 2.356793 GCCATCTCTCATCGGCCG 60.357 66.667 22.12 22.12 38.67 6.13
1842 5557 2.341543 CCATCTCTCATCGGCCGG 59.658 66.667 27.83 10.69 0.00 6.13
1843 5558 2.341543 CATCTCTCATCGGCCGGG 59.658 66.667 27.83 18.44 0.00 5.73
1844 5559 3.620785 ATCTCTCATCGGCCGGGC 61.621 66.667 27.83 20.04 0.00 6.13
1867 5582 2.310233 GCGTGACGTGCAGTGATGT 61.310 57.895 6.91 0.00 0.00 3.06
1868 5583 1.488525 CGTGACGTGCAGTGATGTG 59.511 57.895 0.00 0.00 0.00 3.21
1869 5584 1.205064 GTGACGTGCAGTGATGTGC 59.795 57.895 0.00 0.00 44.27 4.57
1876 5591 2.787259 GCAGTGATGTGCGTTTGTG 58.213 52.632 0.00 0.00 32.74 3.33
1877 5592 0.661187 GCAGTGATGTGCGTTTGTGG 60.661 55.000 0.00 0.00 32.74 4.17
1878 5593 0.661187 CAGTGATGTGCGTTTGTGGC 60.661 55.000 0.00 0.00 0.00 5.01
1879 5594 1.725625 GTGATGTGCGTTTGTGGCG 60.726 57.895 0.00 0.00 0.00 5.69
1880 5595 2.183504 TGATGTGCGTTTGTGGCGT 61.184 52.632 0.00 0.00 0.00 5.68
1881 5596 1.008995 GATGTGCGTTTGTGGCGTT 60.009 52.632 0.00 0.00 0.00 4.84
1882 5597 0.236187 GATGTGCGTTTGTGGCGTTA 59.764 50.000 0.00 0.00 0.00 3.18
1883 5598 0.237235 ATGTGCGTTTGTGGCGTTAG 59.763 50.000 0.00 0.00 0.00 2.34
1884 5599 1.724581 GTGCGTTTGTGGCGTTAGC 60.725 57.895 0.00 0.00 44.18 3.09
1885 5600 1.890041 TGCGTTTGTGGCGTTAGCT 60.890 52.632 0.00 0.00 44.37 3.32
1886 5601 0.600518 TGCGTTTGTGGCGTTAGCTA 60.601 50.000 0.00 0.00 44.37 3.32
1896 5611 2.192974 CGTTAGCTACGCGTACTGC 58.807 57.895 16.41 18.24 44.26 4.40
1897 5612 1.198608 CGTTAGCTACGCGTACTGCC 61.199 60.000 22.36 14.25 44.26 4.85
1898 5613 1.063006 TTAGCTACGCGTACTGCCG 59.937 57.895 22.36 11.63 42.08 5.69
1899 5614 1.647545 TTAGCTACGCGTACTGCCGT 61.648 55.000 22.36 10.96 42.08 5.68
1900 5615 2.313717 TAGCTACGCGTACTGCCGTG 62.314 60.000 22.36 10.31 42.08 4.94
1901 5616 2.481919 CTACGCGTACTGCCGTGA 59.518 61.111 16.41 0.00 42.08 4.35
1902 5617 1.866496 CTACGCGTACTGCCGTGAC 60.866 63.158 16.41 0.00 42.08 3.67
1903 5618 3.326889 TACGCGTACTGCCGTGACC 62.327 63.158 16.41 0.00 42.08 4.02
1905 5620 4.065281 GCGTACTGCCGTGACCCT 62.065 66.667 0.00 0.00 37.76 4.34
1906 5621 2.703798 GCGTACTGCCGTGACCCTA 61.704 63.158 0.00 0.00 37.76 3.53
1907 5622 1.432251 CGTACTGCCGTGACCCTAG 59.568 63.158 0.00 0.00 0.00 3.02
1908 5623 1.310933 CGTACTGCCGTGACCCTAGT 61.311 60.000 0.00 0.00 0.00 2.57
1909 5624 0.455005 GTACTGCCGTGACCCTAGTC 59.545 60.000 0.00 0.00 43.83 2.59
1910 5625 0.330604 TACTGCCGTGACCCTAGTCT 59.669 55.000 0.00 0.00 43.91 3.24
1911 5626 0.966370 ACTGCCGTGACCCTAGTCTC 60.966 60.000 0.00 0.00 43.91 3.36
1912 5627 0.965866 CTGCCGTGACCCTAGTCTCA 60.966 60.000 0.00 0.00 43.91 3.27
1913 5628 0.324368 TGCCGTGACCCTAGTCTCAT 60.324 55.000 0.00 0.00 43.91 2.90
1914 5629 0.386113 GCCGTGACCCTAGTCTCATC 59.614 60.000 0.00 0.00 43.91 2.92
1915 5630 0.663688 CCGTGACCCTAGTCTCATCG 59.336 60.000 0.00 0.00 43.91 3.84
1916 5631 0.663688 CGTGACCCTAGTCTCATCGG 59.336 60.000 0.00 0.00 43.91 4.18
1917 5632 0.386113 GTGACCCTAGTCTCATCGGC 59.614 60.000 0.00 0.00 43.91 5.54
1918 5633 0.259065 TGACCCTAGTCTCATCGGCT 59.741 55.000 0.00 0.00 43.91 5.52
1919 5634 1.493446 TGACCCTAGTCTCATCGGCTA 59.507 52.381 0.00 0.00 43.91 3.93
1920 5635 2.108425 TGACCCTAGTCTCATCGGCTAT 59.892 50.000 0.00 0.00 43.91 2.97
1921 5636 2.490115 GACCCTAGTCTCATCGGCTATG 59.510 54.545 0.00 0.00 40.10 2.23
1922 5637 1.203523 CCCTAGTCTCATCGGCTATGC 59.796 57.143 0.00 0.00 35.38 3.14
1923 5638 1.135546 CCTAGTCTCATCGGCTATGCG 60.136 57.143 0.00 0.00 35.38 4.73
1924 5639 1.537638 CTAGTCTCATCGGCTATGCGT 59.462 52.381 0.00 0.00 35.38 5.24
1925 5640 0.031314 AGTCTCATCGGCTATGCGTG 59.969 55.000 0.00 0.00 35.38 5.34
1926 5641 0.030773 GTCTCATCGGCTATGCGTGA 59.969 55.000 0.00 0.00 35.38 4.35
1927 5642 0.744281 TCTCATCGGCTATGCGTGAA 59.256 50.000 0.00 0.00 35.38 3.18
1928 5643 1.135046 CTCATCGGCTATGCGTGAAG 58.865 55.000 0.00 0.00 35.38 3.02
1934 5649 1.432270 GGCTATGCGTGAAGCTCACC 61.432 60.000 9.71 5.00 44.20 4.02
1935 5650 0.460987 GCTATGCGTGAAGCTCACCT 60.461 55.000 9.71 0.73 44.20 4.00
1936 5651 2.009042 GCTATGCGTGAAGCTCACCTT 61.009 52.381 9.71 5.30 44.20 3.50
1937 5652 1.662629 CTATGCGTGAAGCTCACCTTG 59.337 52.381 9.71 0.24 44.20 3.61
1938 5653 0.250467 ATGCGTGAAGCTCACCTTGT 60.250 50.000 9.71 0.00 44.20 3.16
1939 5654 0.391228 TGCGTGAAGCTCACCTTGTA 59.609 50.000 9.71 0.00 44.20 2.41
1940 5655 0.790814 GCGTGAAGCTCACCTTGTAC 59.209 55.000 9.71 0.00 44.20 2.90
1941 5656 1.872237 GCGTGAAGCTCACCTTGTACA 60.872 52.381 9.71 0.00 44.20 2.90
1942 5657 1.792949 CGTGAAGCTCACCTTGTACAC 59.207 52.381 0.00 0.00 44.20 2.90
1943 5658 1.792949 GTGAAGCTCACCTTGTACACG 59.207 52.381 0.00 0.00 41.37 4.49
1944 5659 1.411246 TGAAGCTCACCTTGTACACGT 59.589 47.619 0.00 0.00 32.78 4.49
1945 5660 2.159014 TGAAGCTCACCTTGTACACGTT 60.159 45.455 0.00 0.00 32.78 3.99
1946 5661 2.150397 AGCTCACCTTGTACACGTTC 57.850 50.000 0.00 0.00 0.00 3.95
1947 5662 1.687123 AGCTCACCTTGTACACGTTCT 59.313 47.619 0.00 0.00 0.00 3.01
1948 5663 2.889045 AGCTCACCTTGTACACGTTCTA 59.111 45.455 0.00 0.00 0.00 2.10
1949 5664 3.319972 AGCTCACCTTGTACACGTTCTAA 59.680 43.478 0.00 0.00 0.00 2.10
1950 5665 3.673809 GCTCACCTTGTACACGTTCTAAG 59.326 47.826 0.00 0.00 0.00 2.18
1951 5666 3.645884 TCACCTTGTACACGTTCTAAGC 58.354 45.455 0.00 0.00 0.00 3.09
1952 5667 2.735134 CACCTTGTACACGTTCTAAGCC 59.265 50.000 0.00 0.00 0.00 4.35
1953 5668 2.631545 ACCTTGTACACGTTCTAAGCCT 59.368 45.455 0.00 0.00 0.00 4.58
1954 5669 3.070590 ACCTTGTACACGTTCTAAGCCTT 59.929 43.478 0.00 0.00 0.00 4.35
1955 5670 4.062991 CCTTGTACACGTTCTAAGCCTTT 58.937 43.478 0.00 0.00 0.00 3.11
1956 5671 4.151867 CCTTGTACACGTTCTAAGCCTTTC 59.848 45.833 0.00 0.00 0.00 2.62
1957 5672 4.325028 TGTACACGTTCTAAGCCTTTCA 57.675 40.909 0.00 0.00 0.00 2.69
1958 5673 4.890088 TGTACACGTTCTAAGCCTTTCAT 58.110 39.130 0.00 0.00 0.00 2.57
1959 5674 4.688879 TGTACACGTTCTAAGCCTTTCATG 59.311 41.667 0.00 0.00 0.00 3.07
1960 5675 3.740115 ACACGTTCTAAGCCTTTCATGT 58.260 40.909 0.00 0.00 0.00 3.21
1961 5676 4.890088 ACACGTTCTAAGCCTTTCATGTA 58.110 39.130 0.00 0.00 0.00 2.29
1962 5677 4.929808 ACACGTTCTAAGCCTTTCATGTAG 59.070 41.667 0.00 0.00 0.00 2.74
1963 5678 4.330074 CACGTTCTAAGCCTTTCATGTAGG 59.670 45.833 10.97 10.97 35.80 3.18
1964 5679 4.020485 ACGTTCTAAGCCTTTCATGTAGGT 60.020 41.667 15.05 3.04 35.13 3.08
1965 5680 5.186409 ACGTTCTAAGCCTTTCATGTAGGTA 59.814 40.000 15.05 3.83 35.13 3.08
1966 5681 6.103997 CGTTCTAAGCCTTTCATGTAGGTAA 58.896 40.000 15.05 4.17 35.13 2.85
1967 5682 6.592607 CGTTCTAAGCCTTTCATGTAGGTAAA 59.407 38.462 15.05 0.00 35.13 2.01
1968 5683 7.118680 CGTTCTAAGCCTTTCATGTAGGTAAAA 59.881 37.037 15.05 0.00 35.13 1.52
1969 5684 8.789762 GTTCTAAGCCTTTCATGTAGGTAAAAA 58.210 33.333 15.05 0.00 35.13 1.94
1989 5704 5.643379 AAAAATCTGATGTGGCGTGTTAT 57.357 34.783 0.00 0.00 0.00 1.89
1990 5705 5.643379 AAAATCTGATGTGGCGTGTTATT 57.357 34.783 0.00 0.00 0.00 1.40
1991 5706 5.643379 AAATCTGATGTGGCGTGTTATTT 57.357 34.783 0.00 0.00 0.00 1.40
1992 5707 6.751514 AAATCTGATGTGGCGTGTTATTTA 57.248 33.333 0.00 0.00 0.00 1.40
1993 5708 6.751514 AATCTGATGTGGCGTGTTATTTAA 57.248 33.333 0.00 0.00 0.00 1.52
1994 5709 5.794687 TCTGATGTGGCGTGTTATTTAAG 57.205 39.130 0.00 0.00 0.00 1.85
1995 5710 5.483811 TCTGATGTGGCGTGTTATTTAAGA 58.516 37.500 0.00 0.00 0.00 2.10
1996 5711 5.935206 TCTGATGTGGCGTGTTATTTAAGAA 59.065 36.000 0.00 0.00 0.00 2.52
1997 5712 6.092122 TCTGATGTGGCGTGTTATTTAAGAAG 59.908 38.462 0.00 0.00 0.00 2.85
1998 5713 5.935206 TGATGTGGCGTGTTATTTAAGAAGA 59.065 36.000 0.00 0.00 0.00 2.87
1999 5714 6.428465 TGATGTGGCGTGTTATTTAAGAAGAA 59.572 34.615 0.00 0.00 0.00 2.52
2000 5715 6.621316 TGTGGCGTGTTATTTAAGAAGAAA 57.379 33.333 0.00 0.00 0.00 2.52
2001 5716 6.664515 TGTGGCGTGTTATTTAAGAAGAAAG 58.335 36.000 0.00 0.00 0.00 2.62
2002 5717 6.483974 TGTGGCGTGTTATTTAAGAAGAAAGA 59.516 34.615 0.00 0.00 0.00 2.52
2003 5718 7.174253 TGTGGCGTGTTATTTAAGAAGAAAGAT 59.826 33.333 0.00 0.00 0.00 2.40
2004 5719 7.481798 GTGGCGTGTTATTTAAGAAGAAAGATG 59.518 37.037 0.00 0.00 0.00 2.90
2005 5720 7.389330 TGGCGTGTTATTTAAGAAGAAAGATGA 59.611 33.333 0.00 0.00 0.00 2.92
2006 5721 7.905493 GGCGTGTTATTTAAGAAGAAAGATGAG 59.095 37.037 0.00 0.00 0.00 2.90
2007 5722 8.443937 GCGTGTTATTTAAGAAGAAAGATGAGT 58.556 33.333 0.00 0.00 0.00 3.41
2008 5723 9.746711 CGTGTTATTTAAGAAGAAAGATGAGTG 57.253 33.333 0.00 0.00 0.00 3.51
2015 5730 9.477484 TTTAAGAAGAAAGATGAGTGTAGTGAC 57.523 33.333 0.00 0.00 0.00 3.67
2016 5731 6.031751 AGAAGAAAGATGAGTGTAGTGACC 57.968 41.667 0.00 0.00 0.00 4.02
2017 5732 4.810191 AGAAAGATGAGTGTAGTGACCC 57.190 45.455 0.00 0.00 0.00 4.46
2018 5733 4.160329 AGAAAGATGAGTGTAGTGACCCA 58.840 43.478 0.00 0.00 0.00 4.51
2019 5734 4.221703 AGAAAGATGAGTGTAGTGACCCAG 59.778 45.833 0.00 0.00 0.00 4.45
2020 5735 3.458044 AGATGAGTGTAGTGACCCAGA 57.542 47.619 0.00 0.00 0.00 3.86
2021 5736 3.779444 AGATGAGTGTAGTGACCCAGAA 58.221 45.455 0.00 0.00 0.00 3.02
2022 5737 4.160329 AGATGAGTGTAGTGACCCAGAAA 58.840 43.478 0.00 0.00 0.00 2.52
2023 5738 4.221703 AGATGAGTGTAGTGACCCAGAAAG 59.778 45.833 0.00 0.00 0.00 2.62
2024 5739 3.572642 TGAGTGTAGTGACCCAGAAAGA 58.427 45.455 0.00 0.00 0.00 2.52
2025 5740 3.964688 TGAGTGTAGTGACCCAGAAAGAA 59.035 43.478 0.00 0.00 0.00 2.52
2026 5741 4.407621 TGAGTGTAGTGACCCAGAAAGAAA 59.592 41.667 0.00 0.00 0.00 2.52
2027 5742 4.704965 AGTGTAGTGACCCAGAAAGAAAC 58.295 43.478 0.00 0.00 0.00 2.78
2028 5743 3.493503 GTGTAGTGACCCAGAAAGAAACG 59.506 47.826 0.00 0.00 0.00 3.60
2029 5744 1.594331 AGTGACCCAGAAAGAAACGC 58.406 50.000 0.00 0.00 0.00 4.84
2030 5745 1.141053 AGTGACCCAGAAAGAAACGCT 59.859 47.619 0.00 0.00 0.00 5.07
2031 5746 2.367567 AGTGACCCAGAAAGAAACGCTA 59.632 45.455 0.00 0.00 0.00 4.26
2032 5747 3.135994 GTGACCCAGAAAGAAACGCTAA 58.864 45.455 0.00 0.00 0.00 3.09
2033 5748 3.562557 GTGACCCAGAAAGAAACGCTAAA 59.437 43.478 0.00 0.00 0.00 1.85
2034 5749 4.215613 GTGACCCAGAAAGAAACGCTAAAT 59.784 41.667 0.00 0.00 0.00 1.40
2035 5750 4.454504 TGACCCAGAAAGAAACGCTAAATC 59.545 41.667 0.00 0.00 0.00 2.17
2036 5751 4.394729 ACCCAGAAAGAAACGCTAAATCA 58.605 39.130 0.00 0.00 0.00 2.57
2037 5752 5.010282 ACCCAGAAAGAAACGCTAAATCAT 58.990 37.500 0.00 0.00 0.00 2.45
2038 5753 5.476945 ACCCAGAAAGAAACGCTAAATCATT 59.523 36.000 0.00 0.00 0.00 2.57
2039 5754 6.657541 ACCCAGAAAGAAACGCTAAATCATTA 59.342 34.615 0.00 0.00 0.00 1.90
2040 5755 7.175990 ACCCAGAAAGAAACGCTAAATCATTAA 59.824 33.333 0.00 0.00 0.00 1.40
2041 5756 8.026607 CCCAGAAAGAAACGCTAAATCATTAAA 58.973 33.333 0.00 0.00 0.00 1.52
2042 5757 9.573133 CCAGAAAGAAACGCTAAATCATTAAAT 57.427 29.630 0.00 0.00 0.00 1.40
2048 5763 9.906660 AGAAACGCTAAATCATTAAATGAAACA 57.093 25.926 0.00 0.00 43.50 2.83
2051 5766 9.691362 AACGCTAAATCATTAAATGAAACAAGT 57.309 25.926 0.00 0.00 43.50 3.16
2052 5767 9.691362 ACGCTAAATCATTAAATGAAACAAGTT 57.309 25.926 0.00 0.00 43.50 2.66
2060 5775 9.255304 TCATTAAATGAAACAAGTTTAGCAACC 57.745 29.630 0.00 0.00 36.11 3.77
2061 5776 9.039870 CATTAAATGAAACAAGTTTAGCAACCA 57.960 29.630 0.00 0.00 32.70 3.67
2062 5777 9.777297 ATTAAATGAAACAAGTTTAGCAACCAT 57.223 25.926 0.00 0.00 32.70 3.55
2065 5780 8.816640 AATGAAACAAGTTTAGCAACCATAAG 57.183 30.769 0.00 0.00 32.70 1.73
2066 5781 6.212955 TGAAACAAGTTTAGCAACCATAAGC 58.787 36.000 0.00 0.00 32.70 3.09
2067 5782 6.040391 TGAAACAAGTTTAGCAACCATAAGCT 59.960 34.615 0.00 0.00 44.55 3.74
2068 5783 7.229707 TGAAACAAGTTTAGCAACCATAAGCTA 59.770 33.333 0.00 0.00 42.05 3.32
2075 5790 6.555463 TTAGCAACCATAAGCTAAGTACCT 57.445 37.500 3.01 0.00 45.47 3.08
2076 5791 4.770795 AGCAACCATAAGCTAAGTACCTG 58.229 43.478 0.00 0.00 39.78 4.00
2077 5792 4.225267 AGCAACCATAAGCTAAGTACCTGT 59.775 41.667 0.00 0.00 39.78 4.00
2078 5793 4.332819 GCAACCATAAGCTAAGTACCTGTG 59.667 45.833 0.00 0.00 0.00 3.66
2079 5794 4.138487 ACCATAAGCTAAGTACCTGTGC 57.862 45.455 0.00 0.00 0.00 4.57
2080 5795 3.517901 ACCATAAGCTAAGTACCTGTGCA 59.482 43.478 0.00 0.00 0.00 4.57
2081 5796 4.164221 ACCATAAGCTAAGTACCTGTGCAT 59.836 41.667 0.00 0.00 0.00 3.96
2082 5797 5.126067 CCATAAGCTAAGTACCTGTGCATT 58.874 41.667 0.00 0.00 0.00 3.56
2083 5798 5.008019 CCATAAGCTAAGTACCTGTGCATTG 59.992 44.000 0.00 0.00 0.00 2.82
2084 5799 2.991250 AGCTAAGTACCTGTGCATTGG 58.009 47.619 6.42 6.42 0.00 3.16
2085 5800 2.017049 GCTAAGTACCTGTGCATTGGG 58.983 52.381 11.75 6.90 0.00 4.12
2086 5801 2.643551 CTAAGTACCTGTGCATTGGGG 58.356 52.381 11.75 4.67 0.00 4.96
2087 5802 1.072266 AAGTACCTGTGCATTGGGGA 58.928 50.000 11.75 0.00 0.00 4.81
2088 5803 0.620556 AGTACCTGTGCATTGGGGAG 59.379 55.000 11.75 0.00 0.00 4.30
2089 5804 0.328258 GTACCTGTGCATTGGGGAGT 59.672 55.000 11.75 0.00 0.00 3.85
2090 5805 1.557832 GTACCTGTGCATTGGGGAGTA 59.442 52.381 11.75 0.00 0.00 2.59
2091 5806 1.298953 ACCTGTGCATTGGGGAGTAT 58.701 50.000 11.75 0.00 0.00 2.12
2092 5807 2.487775 ACCTGTGCATTGGGGAGTATA 58.512 47.619 11.75 0.00 0.00 1.47
2093 5808 2.439507 ACCTGTGCATTGGGGAGTATAG 59.560 50.000 11.75 0.00 0.00 1.31
2094 5809 2.439507 CCTGTGCATTGGGGAGTATAGT 59.560 50.000 0.00 0.00 0.00 2.12
2095 5810 3.117888 CCTGTGCATTGGGGAGTATAGTT 60.118 47.826 0.00 0.00 0.00 2.24
2096 5811 3.879295 CTGTGCATTGGGGAGTATAGTTG 59.121 47.826 0.00 0.00 0.00 3.16
2097 5812 2.618709 GTGCATTGGGGAGTATAGTTGC 59.381 50.000 0.00 0.00 0.00 4.17
2098 5813 2.509548 TGCATTGGGGAGTATAGTTGCT 59.490 45.455 0.00 0.00 0.00 3.91
2099 5814 3.714280 TGCATTGGGGAGTATAGTTGCTA 59.286 43.478 0.00 0.00 0.00 3.49
2100 5815 4.165180 TGCATTGGGGAGTATAGTTGCTAA 59.835 41.667 0.00 0.00 0.00 3.09
2101 5816 4.757149 GCATTGGGGAGTATAGTTGCTAAG 59.243 45.833 0.00 0.00 0.00 2.18
2102 5817 4.417426 TTGGGGAGTATAGTTGCTAAGC 57.583 45.455 0.00 0.00 0.00 3.09
2103 5818 3.654273 TGGGGAGTATAGTTGCTAAGCT 58.346 45.455 0.00 0.00 0.00 3.74
2104 5819 4.811498 TGGGGAGTATAGTTGCTAAGCTA 58.189 43.478 0.00 0.00 0.00 3.32
2105 5820 5.403512 TGGGGAGTATAGTTGCTAAGCTAT 58.596 41.667 0.00 0.00 0.00 2.97
2106 5821 5.844516 TGGGGAGTATAGTTGCTAAGCTATT 59.155 40.000 0.00 0.00 0.00 1.73
2107 5822 6.329197 TGGGGAGTATAGTTGCTAAGCTATTT 59.671 38.462 0.00 0.00 0.00 1.40
2108 5823 7.511371 TGGGGAGTATAGTTGCTAAGCTATTTA 59.489 37.037 0.00 0.00 0.00 1.40
2109 5824 8.373220 GGGGAGTATAGTTGCTAAGCTATTTAA 58.627 37.037 0.00 0.00 0.00 1.52
2110 5825 9.945904 GGGAGTATAGTTGCTAAGCTATTTAAT 57.054 33.333 0.00 0.00 0.00 1.40
2124 5839 7.913674 AGCTATTTAATATGCTTAGCACCTC 57.086 36.000 9.82 0.00 43.04 3.85
2125 5840 7.453393 AGCTATTTAATATGCTTAGCACCTCA 58.547 34.615 9.82 0.00 43.04 3.86
2126 5841 8.105829 AGCTATTTAATATGCTTAGCACCTCAT 58.894 33.333 9.82 0.00 43.04 2.90
2127 5842 8.394121 GCTATTTAATATGCTTAGCACCTCATC 58.606 37.037 9.82 0.00 43.04 2.92
2128 5843 9.664332 CTATTTAATATGCTTAGCACCTCATCT 57.336 33.333 9.82 0.00 43.04 2.90
2131 5846 9.494271 TTTAATATGCTTAGCACCTCATCTAAG 57.506 33.333 9.82 5.02 43.04 2.18
2132 5847 6.678568 ATATGCTTAGCACCTCATCTAAGT 57.321 37.500 9.82 0.00 43.04 2.24
2133 5848 7.782897 ATATGCTTAGCACCTCATCTAAGTA 57.217 36.000 9.82 6.58 43.04 2.24
2134 5849 5.263968 TGCTTAGCACCTCATCTAAGTAC 57.736 43.478 1.39 0.00 42.15 2.73
2135 5850 4.099573 TGCTTAGCACCTCATCTAAGTACC 59.900 45.833 1.39 0.00 42.15 3.34
2136 5851 4.501743 GCTTAGCACCTCATCTAAGTACCC 60.502 50.000 0.00 0.00 42.15 3.69
2137 5852 3.116096 AGCACCTCATCTAAGTACCCA 57.884 47.619 0.00 0.00 0.00 4.51
2138 5853 3.658725 AGCACCTCATCTAAGTACCCAT 58.341 45.455 0.00 0.00 0.00 4.00
2139 5854 4.816126 AGCACCTCATCTAAGTACCCATA 58.184 43.478 0.00 0.00 0.00 2.74
2140 5855 4.589374 AGCACCTCATCTAAGTACCCATAC 59.411 45.833 0.00 0.00 0.00 2.39
2141 5856 4.344102 GCACCTCATCTAAGTACCCATACA 59.656 45.833 0.00 0.00 33.30 2.29
2142 5857 5.012148 GCACCTCATCTAAGTACCCATACAT 59.988 44.000 0.00 0.00 33.30 2.29
2143 5858 6.692486 CACCTCATCTAAGTACCCATACATC 58.308 44.000 0.00 0.00 33.30 3.06
2144 5859 6.267699 CACCTCATCTAAGTACCCATACATCA 59.732 42.308 0.00 0.00 33.30 3.07
2145 5860 6.844388 ACCTCATCTAAGTACCCATACATCAA 59.156 38.462 0.00 0.00 33.30 2.57
2146 5861 7.155328 CCTCATCTAAGTACCCATACATCAAC 58.845 42.308 0.00 0.00 33.30 3.18
2147 5862 7.202001 CCTCATCTAAGTACCCATACATCAACA 60.202 40.741 0.00 0.00 33.30 3.33
2148 5863 7.726216 TCATCTAAGTACCCATACATCAACAG 58.274 38.462 0.00 0.00 33.30 3.16
2149 5864 7.344612 TCATCTAAGTACCCATACATCAACAGT 59.655 37.037 0.00 0.00 33.30 3.55
2150 5865 8.638873 CATCTAAGTACCCATACATCAACAGTA 58.361 37.037 0.00 0.00 33.30 2.74
2151 5866 8.234136 TCTAAGTACCCATACATCAACAGTAG 57.766 38.462 0.00 0.00 33.30 2.57
2152 5867 5.277857 AGTACCCATACATCAACAGTAGC 57.722 43.478 0.00 0.00 33.30 3.58
2153 5868 3.560636 ACCCATACATCAACAGTAGCC 57.439 47.619 0.00 0.00 0.00 3.93
2154 5869 2.843730 ACCCATACATCAACAGTAGCCA 59.156 45.455 0.00 0.00 0.00 4.75
2155 5870 3.265737 ACCCATACATCAACAGTAGCCAA 59.734 43.478 0.00 0.00 0.00 4.52
2156 5871 3.627577 CCCATACATCAACAGTAGCCAAC 59.372 47.826 0.00 0.00 0.00 3.77
2157 5872 4.260985 CCATACATCAACAGTAGCCAACA 58.739 43.478 0.00 0.00 0.00 3.33
2158 5873 4.333649 CCATACATCAACAGTAGCCAACAG 59.666 45.833 0.00 0.00 0.00 3.16
2159 5874 3.492102 ACATCAACAGTAGCCAACAGT 57.508 42.857 0.00 0.00 0.00 3.55
2160 5875 4.617253 ACATCAACAGTAGCCAACAGTA 57.383 40.909 0.00 0.00 0.00 2.74
2161 5876 4.569943 ACATCAACAGTAGCCAACAGTAG 58.430 43.478 0.00 0.00 0.00 2.57
2162 5877 3.040147 TCAACAGTAGCCAACAGTAGC 57.960 47.619 0.00 0.00 0.00 3.58
2163 5878 2.076863 CAACAGTAGCCAACAGTAGCC 58.923 52.381 0.00 0.00 0.00 3.93
2164 5879 1.645710 ACAGTAGCCAACAGTAGCCT 58.354 50.000 0.00 0.00 0.00 4.58
2165 5880 1.550976 ACAGTAGCCAACAGTAGCCTC 59.449 52.381 0.00 0.00 0.00 4.70
2166 5881 1.550524 CAGTAGCCAACAGTAGCCTCA 59.449 52.381 0.00 0.00 0.00 3.86
2167 5882 1.827969 AGTAGCCAACAGTAGCCTCAG 59.172 52.381 0.00 0.00 0.00 3.35
2168 5883 1.825474 GTAGCCAACAGTAGCCTCAGA 59.175 52.381 0.00 0.00 0.00 3.27
2169 5884 1.352083 AGCCAACAGTAGCCTCAGAA 58.648 50.000 0.00 0.00 0.00 3.02
2170 5885 1.002544 AGCCAACAGTAGCCTCAGAAC 59.997 52.381 0.00 0.00 0.00 3.01
2171 5886 1.002544 GCCAACAGTAGCCTCAGAACT 59.997 52.381 0.00 0.00 0.00 3.01
2172 5887 2.933056 GCCAACAGTAGCCTCAGAACTC 60.933 54.545 0.00 0.00 0.00 3.01
2173 5888 2.300152 CCAACAGTAGCCTCAGAACTCA 59.700 50.000 0.00 0.00 0.00 3.41
2174 5889 3.583806 CAACAGTAGCCTCAGAACTCAG 58.416 50.000 0.00 0.00 0.00 3.35
2175 5890 3.162147 ACAGTAGCCTCAGAACTCAGA 57.838 47.619 0.00 0.00 0.00 3.27
2176 5891 3.501349 ACAGTAGCCTCAGAACTCAGAA 58.499 45.455 0.00 0.00 0.00 3.02
2177 5892 3.509575 ACAGTAGCCTCAGAACTCAGAAG 59.490 47.826 0.00 0.00 0.00 2.85
2178 5893 2.495669 AGTAGCCTCAGAACTCAGAAGC 59.504 50.000 0.00 0.00 0.00 3.86
2179 5894 1.346062 AGCCTCAGAACTCAGAAGCA 58.654 50.000 0.00 0.00 0.00 3.91
2180 5895 1.001860 AGCCTCAGAACTCAGAAGCAC 59.998 52.381 0.00 0.00 0.00 4.40
2181 5896 1.707632 CCTCAGAACTCAGAAGCACG 58.292 55.000 0.00 0.00 0.00 5.34
2182 5897 1.270826 CCTCAGAACTCAGAAGCACGA 59.729 52.381 0.00 0.00 0.00 4.35
2183 5898 2.094286 CCTCAGAACTCAGAAGCACGAT 60.094 50.000 0.00 0.00 0.00 3.73
2184 5899 3.178267 CTCAGAACTCAGAAGCACGATC 58.822 50.000 0.00 0.00 0.00 3.69
2185 5900 2.094494 TCAGAACTCAGAAGCACGATCC 60.094 50.000 0.00 0.00 0.00 3.36
2186 5901 1.895798 AGAACTCAGAAGCACGATCCA 59.104 47.619 0.00 0.00 0.00 3.41
2187 5902 2.499289 AGAACTCAGAAGCACGATCCAT 59.501 45.455 0.00 0.00 0.00 3.41
2188 5903 3.055530 AGAACTCAGAAGCACGATCCATT 60.056 43.478 0.00 0.00 0.00 3.16
2189 5904 4.160439 AGAACTCAGAAGCACGATCCATTA 59.840 41.667 0.00 0.00 0.00 1.90
2190 5905 4.471904 ACTCAGAAGCACGATCCATTAA 57.528 40.909 0.00 0.00 0.00 1.40
2191 5906 5.028549 ACTCAGAAGCACGATCCATTAAT 57.971 39.130 0.00 0.00 0.00 1.40
2192 5907 5.431765 ACTCAGAAGCACGATCCATTAATT 58.568 37.500 0.00 0.00 0.00 1.40
2193 5908 5.882557 ACTCAGAAGCACGATCCATTAATTT 59.117 36.000 0.00 0.00 0.00 1.82
2194 5909 6.375455 ACTCAGAAGCACGATCCATTAATTTT 59.625 34.615 0.00 0.00 0.00 1.82
2195 5910 7.094205 ACTCAGAAGCACGATCCATTAATTTTT 60.094 33.333 0.00 0.00 0.00 1.94
2216 5931 3.299340 TTCCGGATAGAATAGAAGCGC 57.701 47.619 4.15 0.00 0.00 5.92
2217 5932 2.235891 TCCGGATAGAATAGAAGCGCA 58.764 47.619 11.47 0.00 0.00 6.09
2218 5933 2.626266 TCCGGATAGAATAGAAGCGCAA 59.374 45.455 11.47 0.00 0.00 4.85
2219 5934 3.258372 TCCGGATAGAATAGAAGCGCAAT 59.742 43.478 11.47 0.00 0.00 3.56
2220 5935 3.614616 CCGGATAGAATAGAAGCGCAATC 59.385 47.826 11.47 7.77 0.00 2.67
2221 5936 3.614616 CGGATAGAATAGAAGCGCAATCC 59.385 47.826 11.47 6.45 0.00 3.01
2222 5937 4.569943 GGATAGAATAGAAGCGCAATCCA 58.430 43.478 11.47 0.00 33.39 3.41
2223 5938 4.390297 GGATAGAATAGAAGCGCAATCCAC 59.610 45.833 11.47 0.00 33.39 4.02
2224 5939 2.205074 AGAATAGAAGCGCAATCCACG 58.795 47.619 11.47 0.00 0.00 4.94
2225 5940 1.933853 GAATAGAAGCGCAATCCACGT 59.066 47.619 11.47 0.00 0.00 4.49
2226 5941 2.024176 ATAGAAGCGCAATCCACGTT 57.976 45.000 11.47 0.00 0.00 3.99
2227 5942 1.075542 TAGAAGCGCAATCCACGTTG 58.924 50.000 11.47 0.00 0.00 4.10
2228 5943 1.154225 GAAGCGCAATCCACGTTGG 60.154 57.895 11.47 0.00 39.43 3.77
2229 5944 3.267597 AAGCGCAATCCACGTTGGC 62.268 57.895 11.47 0.00 37.47 4.52
2230 5945 3.737172 GCGCAATCCACGTTGGCT 61.737 61.111 0.30 0.00 37.47 4.75
2231 5946 2.176546 CGCAATCCACGTTGGCTG 59.823 61.111 0.00 0.00 37.47 4.85
2232 5947 2.324330 CGCAATCCACGTTGGCTGA 61.324 57.895 0.00 0.00 37.47 4.26
2233 5948 1.210155 GCAATCCACGTTGGCTGAC 59.790 57.895 0.00 0.00 37.47 3.51
2234 5949 1.237285 GCAATCCACGTTGGCTGACT 61.237 55.000 0.00 0.00 37.47 3.41
2235 5950 1.943968 GCAATCCACGTTGGCTGACTA 60.944 52.381 0.00 0.00 37.47 2.59
2236 5951 1.732259 CAATCCACGTTGGCTGACTAC 59.268 52.381 0.00 0.00 37.47 2.73
2237 5952 1.267121 ATCCACGTTGGCTGACTACT 58.733 50.000 0.00 0.00 37.47 2.57
2238 5953 0.317160 TCCACGTTGGCTGACTACTG 59.683 55.000 0.00 0.00 37.47 2.74
2239 5954 0.317160 CCACGTTGGCTGACTACTGA 59.683 55.000 0.00 0.00 0.00 3.41
2240 5955 1.066858 CCACGTTGGCTGACTACTGAT 60.067 52.381 0.00 0.00 0.00 2.90
2241 5956 1.995484 CACGTTGGCTGACTACTGATG 59.005 52.381 0.00 0.00 0.00 3.07
2242 5957 1.618837 ACGTTGGCTGACTACTGATGT 59.381 47.619 0.00 0.00 0.00 3.06
2243 5958 1.995484 CGTTGGCTGACTACTGATGTG 59.005 52.381 0.00 0.00 0.00 3.21
2244 5959 2.352715 CGTTGGCTGACTACTGATGTGA 60.353 50.000 0.00 0.00 0.00 3.58
2245 5960 2.996621 GTTGGCTGACTACTGATGTGAC 59.003 50.000 0.00 0.00 0.00 3.67
2246 5961 1.550524 TGGCTGACTACTGATGTGACC 59.449 52.381 0.00 0.00 0.00 4.02
2247 5962 1.550524 GGCTGACTACTGATGTGACCA 59.449 52.381 0.00 0.00 0.00 4.02
2248 5963 2.169352 GGCTGACTACTGATGTGACCAT 59.831 50.000 0.00 0.00 0.00 3.55
2249 5964 3.369892 GGCTGACTACTGATGTGACCATT 60.370 47.826 0.00 0.00 0.00 3.16
2250 5965 4.141937 GGCTGACTACTGATGTGACCATTA 60.142 45.833 0.00 0.00 0.00 1.90
2251 5966 5.419542 GCTGACTACTGATGTGACCATTAA 58.580 41.667 0.00 0.00 0.00 1.40
2252 5967 6.051717 GCTGACTACTGATGTGACCATTAAT 58.948 40.000 0.00 0.00 0.00 1.40
2253 5968 7.210174 GCTGACTACTGATGTGACCATTAATA 58.790 38.462 0.00 0.00 0.00 0.98
2254 5969 7.875041 GCTGACTACTGATGTGACCATTAATAT 59.125 37.037 0.00 0.00 0.00 1.28
2291 6006 7.760131 TTAAATTGTACATACACGCTAGTCC 57.240 36.000 0.00 0.00 35.64 3.85
2292 6007 5.593679 AATTGTACATACACGCTAGTCCT 57.406 39.130 0.00 0.00 35.64 3.85
2293 6008 6.704289 AATTGTACATACACGCTAGTCCTA 57.296 37.500 0.00 0.00 35.64 2.94
2294 6009 6.704289 ATTGTACATACACGCTAGTCCTAA 57.296 37.500 0.00 0.00 35.64 2.69
2295 6010 6.513806 TTGTACATACACGCTAGTCCTAAA 57.486 37.500 0.00 0.00 35.64 1.85
2296 6011 6.704289 TGTACATACACGCTAGTCCTAAAT 57.296 37.500 0.00 0.00 0.00 1.40
2297 6012 7.806409 TGTACATACACGCTAGTCCTAAATA 57.194 36.000 0.00 0.00 0.00 1.40
2298 6013 8.224389 TGTACATACACGCTAGTCCTAAATAA 57.776 34.615 0.00 0.00 0.00 1.40
2299 6014 8.685427 TGTACATACACGCTAGTCCTAAATAAA 58.315 33.333 0.00 0.00 0.00 1.40
2300 6015 9.688592 GTACATACACGCTAGTCCTAAATAAAT 57.311 33.333 0.00 0.00 0.00 1.40
2301 6016 8.589335 ACATACACGCTAGTCCTAAATAAATG 57.411 34.615 0.00 0.00 0.00 2.32
2302 6017 8.418662 ACATACACGCTAGTCCTAAATAAATGA 58.581 33.333 0.00 0.00 0.00 2.57
2303 6018 9.256477 CATACACGCTAGTCCTAAATAAATGAA 57.744 33.333 0.00 0.00 0.00 2.57
2304 6019 9.826574 ATACACGCTAGTCCTAAATAAATGAAA 57.173 29.630 0.00 0.00 0.00 2.69
2305 6020 8.556213 ACACGCTAGTCCTAAATAAATGAAAA 57.444 30.769 0.00 0.00 0.00 2.29
2306 6021 8.448615 ACACGCTAGTCCTAAATAAATGAAAAC 58.551 33.333 0.00 0.00 0.00 2.43
2307 6022 7.908601 CACGCTAGTCCTAAATAAATGAAAACC 59.091 37.037 0.00 0.00 0.00 3.27
2308 6023 7.608761 ACGCTAGTCCTAAATAAATGAAAACCA 59.391 33.333 0.00 0.00 0.00 3.67
2309 6024 7.908601 CGCTAGTCCTAAATAAATGAAAACCAC 59.091 37.037 0.00 0.00 0.00 4.16
2310 6025 8.957466 GCTAGTCCTAAATAAATGAAAACCACT 58.043 33.333 0.00 0.00 0.00 4.00
2312 6027 8.934023 AGTCCTAAATAAATGAAAACCACTCA 57.066 30.769 0.00 0.00 0.00 3.41
2313 6028 8.793592 AGTCCTAAATAAATGAAAACCACTCAC 58.206 33.333 0.00 0.00 0.00 3.51
2314 6029 8.573035 GTCCTAAATAAATGAAAACCACTCACA 58.427 33.333 0.00 0.00 0.00 3.58
2315 6030 9.308000 TCCTAAATAAATGAAAACCACTCACAT 57.692 29.630 0.00 0.00 0.00 3.21
2374 6089 1.479323 GTAGGCATTCACCACTCCGTA 59.521 52.381 0.00 0.00 0.00 4.02
2389 6104 2.149555 CGTACACACGCAAGCATCA 58.850 52.632 0.00 0.00 42.05 3.07
2444 6160 3.747976 GCTGGTTTTCGGCGCCAT 61.748 61.111 28.98 0.00 38.09 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 1756 5.105616 AAGATAACTTATGTTGGCGCACCA 61.106 41.667 10.83 1.88 38.27 4.17
51 1785 4.586841 AGAACTATCTACCATGACCAGCTC 59.413 45.833 0.00 0.00 32.88 4.09
65 1799 8.370940 TGAGTGAAATTGTCTTGAGAACTATCT 58.629 33.333 0.00 0.00 39.10 1.98
173 1921 3.864789 TCCTAATGCCTCCCAAATCTC 57.135 47.619 0.00 0.00 0.00 2.75
218 1966 2.927856 TGGATGCACCACCGGACT 60.928 61.111 9.46 0.00 44.64 3.85
234 1982 4.577834 TGTGGAATAATGATGCAGCATG 57.422 40.909 19.76 0.00 40.87 4.06
236 1984 4.403113 ACATTGTGGAATAATGATGCAGCA 59.597 37.500 7.31 7.31 46.88 4.41
261 2010 2.290641 GGCCAAAGATATTGTACAGCCG 59.709 50.000 0.00 0.00 0.00 5.52
271 2028 1.680338 GTTGCGGAGGCCAAAGATAT 58.320 50.000 5.01 0.00 38.85 1.63
274 2031 2.668212 CGTTGCGGAGGCCAAAGA 60.668 61.111 5.01 0.00 38.85 2.52
290 2047 1.207089 TGCTCCTGTTTCTACATCCCG 59.793 52.381 0.00 0.00 32.86 5.14
352 2144 9.121658 ACAATGAGATATAGTAGTTCTTCGACA 57.878 33.333 0.00 0.00 0.00 4.35
364 2159 7.445945 GGAGGTTTGCTACAATGAGATATAGT 58.554 38.462 0.00 0.00 0.00 2.12
367 2162 5.163301 ACGGAGGTTTGCTACAATGAGATAT 60.163 40.000 0.00 0.00 0.00 1.63
369 2164 3.055094 ACGGAGGTTTGCTACAATGAGAT 60.055 43.478 0.00 0.00 0.00 2.75
374 2169 2.423577 GACACGGAGGTTTGCTACAAT 58.576 47.619 0.00 0.00 0.00 2.71
383 2178 2.833631 AATTCTTCGACACGGAGGTT 57.166 45.000 0.00 0.00 32.62 3.50
397 2192 8.969267 CGCTGACGAAAAAGATATAGTAATTCT 58.031 33.333 0.00 0.00 43.93 2.40
416 2211 0.161024 GGTTTCGAGTTTCGCTGACG 59.839 55.000 0.00 0.00 40.21 4.35
421 2216 2.159693 GGAGATTGGTTTCGAGTTTCGC 60.160 50.000 0.00 0.00 40.21 4.70
422 2217 2.415512 GGGAGATTGGTTTCGAGTTTCG 59.584 50.000 0.00 0.00 42.10 3.46
436 3454 6.933514 TCTTTTTATTTTGCAGGGGAGATT 57.066 33.333 0.00 0.00 0.00 2.40
466 3836 7.786030 TCCTCCAAACTCTATATCAGTTTCAG 58.214 38.462 8.96 8.29 41.25 3.02
521 4043 8.086522 TGTACTAGTAGTTCACTTGATTTGGTC 58.913 37.037 8.40 0.00 38.80 4.02
540 4062 4.948847 TGCAAGATGTAGCCATGTACTAG 58.051 43.478 0.00 0.00 0.00 2.57
541 4063 5.299949 CATGCAAGATGTAGCCATGTACTA 58.700 41.667 0.00 0.00 0.00 1.82
542 4064 3.912496 TGCAAGATGTAGCCATGTACT 57.088 42.857 0.00 0.00 0.00 2.73
585 4107 6.407525 CCAGAATAACCCACAAACCAGAAAAA 60.408 38.462 0.00 0.00 0.00 1.94
592 4114 2.243810 TGCCAGAATAACCCACAAACC 58.756 47.619 0.00 0.00 0.00 3.27
684 4235 2.486982 GTCTATCCGATGCTAGCCGTTA 59.513 50.000 13.29 0.38 0.00 3.18
707 4258 9.140286 GAAAAGCAATAACTAAATGAGGGAAAC 57.860 33.333 0.00 0.00 0.00 2.78
727 4278 3.559655 ACGGGAAATTTTTGCAGAAAAGC 59.440 39.130 6.49 0.00 32.62 3.51
730 4281 4.116238 GTGACGGGAAATTTTTGCAGAAA 58.884 39.130 4.71 4.71 0.00 2.52
731 4282 3.491792 GGTGACGGGAAATTTTTGCAGAA 60.492 43.478 2.12 0.00 0.00 3.02
732 4283 2.035321 GGTGACGGGAAATTTTTGCAGA 59.965 45.455 2.12 0.00 0.00 4.26
733 4284 2.403259 GGTGACGGGAAATTTTTGCAG 58.597 47.619 0.00 0.00 0.00 4.41
734 4285 1.069358 GGGTGACGGGAAATTTTTGCA 59.931 47.619 0.00 0.00 0.00 4.08
735 4286 1.790755 GGGTGACGGGAAATTTTTGC 58.209 50.000 0.00 0.00 0.00 3.68
737 4288 1.984066 TCGGGTGACGGGAAATTTTT 58.016 45.000 0.00 0.00 44.45 1.94
755 4306 0.172352 TGGCGCGAATTGGGAATTTC 59.828 50.000 12.10 0.00 0.00 2.17
783 4334 0.752009 GAAGGGGAGCCGGATTTTCC 60.752 60.000 5.05 5.86 0.00 3.13
788 4403 3.090532 GTGGAAGGGGAGCCGGAT 61.091 66.667 5.05 0.00 0.00 4.18
855 4471 4.088923 GCGGTGGCGTTTTATAAAAAGAAC 59.911 41.667 22.83 18.65 30.46 3.01
860 4476 1.201880 GGGCGGTGGCGTTTTATAAAA 59.798 47.619 6.54 6.54 41.24 1.52
924 4541 1.825281 GATGGCCGGGATCTGAGAGG 61.825 65.000 2.18 0.00 0.00 3.69
980 4598 1.901650 CTTCTTGTTCGCGGTGGAGC 61.902 60.000 6.13 0.00 0.00 4.70
1258 4920 7.823799 GGTCTGAATCAGAAGAGAAAGAAAGAT 59.176 37.037 15.28 0.00 42.46 2.40
1531 5196 1.531149 CGATGACACACAAACCCAGAC 59.469 52.381 0.00 0.00 0.00 3.51
1533 5198 0.874390 CCGATGACACACAAACCCAG 59.126 55.000 0.00 0.00 0.00 4.45
1552 5218 0.620556 ACCAGATCCACCATGGTCAC 59.379 55.000 16.53 6.72 43.94 3.67
1556 5222 2.493278 GTTCAAACCAGATCCACCATGG 59.507 50.000 11.19 11.19 39.43 3.66
1557 5224 2.162208 CGTTCAAACCAGATCCACCATG 59.838 50.000 0.00 0.00 0.00 3.66
1558 5225 2.436417 CGTTCAAACCAGATCCACCAT 58.564 47.619 0.00 0.00 0.00 3.55
1573 5240 2.390599 GCGAGCTGCATTCCGTTCA 61.391 57.895 1.02 0.00 45.45 3.18
1607 5294 1.003866 GGTTTCACGCGGATTAGCATC 60.004 52.381 12.47 0.00 36.85 3.91
1608 5295 1.014352 GGTTTCACGCGGATTAGCAT 58.986 50.000 12.47 0.00 36.85 3.79
1617 5304 0.800683 TAGCATCTCGGTTTCACGCG 60.801 55.000 3.53 3.53 0.00 6.01
1618 5305 0.645868 GTAGCATCTCGGTTTCACGC 59.354 55.000 0.00 0.00 0.00 5.34
1620 5307 1.278238 CGGTAGCATCTCGGTTTCAC 58.722 55.000 0.00 0.00 0.00 3.18
1633 5320 1.872679 CGACGGAGAAAGCGGTAGC 60.873 63.158 0.00 0.00 45.58 3.58
1634 5321 1.872679 GCGACGGAGAAAGCGGTAG 60.873 63.158 0.00 0.00 0.00 3.18
1635 5322 2.180017 GCGACGGAGAAAGCGGTA 59.820 61.111 0.00 0.00 0.00 4.02
1637 5324 2.881352 GAGCGACGGAGAAAGCGG 60.881 66.667 0.00 0.00 34.34 5.52
1638 5325 1.282248 TTTGAGCGACGGAGAAAGCG 61.282 55.000 0.00 0.00 34.34 4.68
1639 5326 0.164002 GTTTGAGCGACGGAGAAAGC 59.836 55.000 0.00 0.00 0.00 3.51
1642 5329 1.372499 CGGTTTGAGCGACGGAGAA 60.372 57.895 0.00 0.00 42.41 2.87
1643 5330 2.257371 CGGTTTGAGCGACGGAGA 59.743 61.111 0.00 0.00 42.41 3.71
1645 5332 2.355363 CACGGTTTGAGCGACGGA 60.355 61.111 6.53 0.00 42.41 4.69
1646 5333 3.411351 CCACGGTTTGAGCGACGG 61.411 66.667 6.53 2.92 42.41 4.79
1647 5334 4.072088 GCCACGGTTTGAGCGACG 62.072 66.667 6.53 0.00 42.41 5.12
1649 5336 4.595538 ACGCCACGGTTTGAGCGA 62.596 61.111 10.49 0.00 43.54 4.93
1651 5338 2.331019 AAACACGCCACGGTTTGAGC 62.331 55.000 6.01 0.00 35.99 4.26
1652 5339 0.099791 AAAACACGCCACGGTTTGAG 59.900 50.000 7.14 0.00 37.30 3.02
1653 5340 0.526662 AAAAACACGCCACGGTTTGA 59.473 45.000 7.14 0.00 37.30 2.69
1654 5341 3.037485 AAAAACACGCCACGGTTTG 57.963 47.368 7.14 0.00 37.30 2.93
1670 5379 8.215926 TCGAACTGGATTTTTCAGACTAAAAA 57.784 30.769 0.00 0.00 41.25 1.94
1674 5383 5.011738 ACCTCGAACTGGATTTTTCAGACTA 59.988 40.000 0.00 0.00 36.22 2.59
1682 5391 4.202367 ACTCTGAACCTCGAACTGGATTTT 60.202 41.667 0.00 0.00 0.00 1.82
1683 5392 3.325135 ACTCTGAACCTCGAACTGGATTT 59.675 43.478 0.00 0.00 0.00 2.17
1684 5393 2.900546 ACTCTGAACCTCGAACTGGATT 59.099 45.455 0.00 0.00 0.00 3.01
1738 5453 2.522436 TGGAAGTCCCGGACACGT 60.522 61.111 19.95 4.28 38.78 4.49
1805 5520 1.005037 CGACCACCTACAGCTGCAA 60.005 57.895 15.27 0.64 0.00 4.08
1867 5582 0.600518 TAGCTAACGCCACAAACGCA 60.601 50.000 0.00 0.00 36.60 5.24
1868 5583 0.179233 GTAGCTAACGCCACAAACGC 60.179 55.000 0.00 0.00 36.60 4.84
1869 5584 0.092351 CGTAGCTAACGCCACAAACG 59.908 55.000 0.00 0.00 46.10 3.60
1870 5585 3.941194 CGTAGCTAACGCCACAAAC 57.059 52.632 0.00 0.00 46.10 2.93
1884 5599 1.866496 GTCACGGCAGTACGCGTAG 60.866 63.158 21.25 10.36 43.84 3.51
1885 5600 2.176546 GTCACGGCAGTACGCGTA 59.823 61.111 16.41 16.41 43.84 4.42
1886 5601 4.712425 GGTCACGGCAGTACGCGT 62.712 66.667 19.17 19.17 43.84 6.01
1888 5603 2.609183 CTAGGGTCACGGCAGTACGC 62.609 65.000 0.00 1.72 41.28 4.42
1889 5604 1.310933 ACTAGGGTCACGGCAGTACG 61.311 60.000 0.00 0.00 40.31 3.67
1890 5605 0.455005 GACTAGGGTCACGGCAGTAC 59.545 60.000 0.00 0.00 41.75 2.73
1891 5606 0.330604 AGACTAGGGTCACGGCAGTA 59.669 55.000 0.00 0.00 44.36 2.74
1892 5607 0.966370 GAGACTAGGGTCACGGCAGT 60.966 60.000 0.00 0.00 44.36 4.40
1893 5608 0.965866 TGAGACTAGGGTCACGGCAG 60.966 60.000 0.00 0.00 44.36 4.85
1894 5609 0.324368 ATGAGACTAGGGTCACGGCA 60.324 55.000 0.00 0.00 44.36 5.69
1895 5610 0.386113 GATGAGACTAGGGTCACGGC 59.614 60.000 0.00 0.00 44.36 5.68
1896 5611 0.663688 CGATGAGACTAGGGTCACGG 59.336 60.000 0.00 0.00 44.36 4.94
1897 5612 0.663688 CCGATGAGACTAGGGTCACG 59.336 60.000 0.00 3.73 44.36 4.35
1898 5613 0.386113 GCCGATGAGACTAGGGTCAC 59.614 60.000 0.00 0.00 44.36 3.67
1899 5614 0.259065 AGCCGATGAGACTAGGGTCA 59.741 55.000 0.00 0.00 44.36 4.02
1900 5615 2.273538 TAGCCGATGAGACTAGGGTC 57.726 55.000 0.00 0.00 42.41 4.46
1901 5616 2.520069 CATAGCCGATGAGACTAGGGT 58.480 52.381 0.00 0.00 37.82 4.34
1902 5617 1.203523 GCATAGCCGATGAGACTAGGG 59.796 57.143 0.00 0.00 37.82 3.53
1903 5618 1.135546 CGCATAGCCGATGAGACTAGG 60.136 57.143 0.00 0.00 37.53 3.02
1904 5619 1.537638 ACGCATAGCCGATGAGACTAG 59.462 52.381 6.90 0.00 37.53 2.57
1905 5620 1.266989 CACGCATAGCCGATGAGACTA 59.733 52.381 6.90 0.00 37.53 2.59
1906 5621 0.031314 CACGCATAGCCGATGAGACT 59.969 55.000 6.90 0.00 37.53 3.24
1907 5622 0.030773 TCACGCATAGCCGATGAGAC 59.969 55.000 6.90 0.00 37.53 3.36
1908 5623 0.744281 TTCACGCATAGCCGATGAGA 59.256 50.000 6.90 0.00 37.53 3.27
1909 5624 1.135046 CTTCACGCATAGCCGATGAG 58.865 55.000 0.41 0.00 40.89 2.90
1910 5625 0.875908 GCTTCACGCATAGCCGATGA 60.876 55.000 0.41 0.00 37.82 2.92
1911 5626 0.877649 AGCTTCACGCATAGCCGATG 60.878 55.000 0.00 0.00 42.61 3.84
1912 5627 0.598680 GAGCTTCACGCATAGCCGAT 60.599 55.000 0.00 0.00 42.61 4.18
1913 5628 1.226974 GAGCTTCACGCATAGCCGA 60.227 57.895 0.00 0.00 42.61 5.54
1914 5629 1.519234 TGAGCTTCACGCATAGCCG 60.519 57.895 0.00 0.00 42.61 5.52
1915 5630 2.009888 GTGAGCTTCACGCATAGCC 58.990 57.895 0.00 0.00 42.61 3.93
1923 5638 1.792949 CGTGTACAAGGTGAGCTTCAC 59.207 52.381 0.00 0.00 46.23 3.18
1924 5639 1.411246 ACGTGTACAAGGTGAGCTTCA 59.589 47.619 13.47 0.00 0.00 3.02
1925 5640 2.150397 ACGTGTACAAGGTGAGCTTC 57.850 50.000 13.47 0.00 0.00 3.86
1926 5641 2.102588 AGAACGTGTACAAGGTGAGCTT 59.897 45.455 13.47 0.00 0.00 3.74
1927 5642 1.687123 AGAACGTGTACAAGGTGAGCT 59.313 47.619 13.47 0.00 0.00 4.09
1928 5643 2.150397 AGAACGTGTACAAGGTGAGC 57.850 50.000 13.47 0.00 0.00 4.26
1929 5644 3.673809 GCTTAGAACGTGTACAAGGTGAG 59.326 47.826 13.47 5.61 0.00 3.51
1930 5645 3.553508 GGCTTAGAACGTGTACAAGGTGA 60.554 47.826 13.47 0.00 0.00 4.02
1931 5646 2.735134 GGCTTAGAACGTGTACAAGGTG 59.265 50.000 13.47 0.00 0.00 4.00
1932 5647 2.631545 AGGCTTAGAACGTGTACAAGGT 59.368 45.455 13.47 6.38 0.00 3.50
1933 5648 3.314541 AGGCTTAGAACGTGTACAAGG 57.685 47.619 13.47 3.79 0.00 3.61
1934 5649 4.748102 TGAAAGGCTTAGAACGTGTACAAG 59.252 41.667 7.29 7.29 0.00 3.16
1935 5650 4.695396 TGAAAGGCTTAGAACGTGTACAA 58.305 39.130 0.00 0.00 0.00 2.41
1936 5651 4.325028 TGAAAGGCTTAGAACGTGTACA 57.675 40.909 0.00 0.00 0.00 2.90
1937 5652 4.689345 ACATGAAAGGCTTAGAACGTGTAC 59.311 41.667 0.00 0.00 0.00 2.90
1938 5653 4.890088 ACATGAAAGGCTTAGAACGTGTA 58.110 39.130 0.00 0.00 0.00 2.90
1939 5654 3.740115 ACATGAAAGGCTTAGAACGTGT 58.260 40.909 0.00 7.77 0.00 4.49
1940 5655 4.330074 CCTACATGAAAGGCTTAGAACGTG 59.670 45.833 0.00 7.17 0.00 4.49
1941 5656 4.020485 ACCTACATGAAAGGCTTAGAACGT 60.020 41.667 15.88 0.00 37.67 3.99
1942 5657 4.504858 ACCTACATGAAAGGCTTAGAACG 58.495 43.478 15.88 0.00 37.67 3.95
1943 5658 7.916914 TTTACCTACATGAAAGGCTTAGAAC 57.083 36.000 15.88 0.00 37.67 3.01
1944 5659 8.927675 TTTTTACCTACATGAAAGGCTTAGAA 57.072 30.769 15.88 4.50 37.67 2.10
1967 5682 5.643379 ATAACACGCCACATCAGATTTTT 57.357 34.783 0.00 0.00 0.00 1.94
1968 5683 5.643379 AATAACACGCCACATCAGATTTT 57.357 34.783 0.00 0.00 0.00 1.82
1969 5684 5.643379 AAATAACACGCCACATCAGATTT 57.357 34.783 0.00 0.00 0.00 2.17
1970 5685 6.597672 TCTTAAATAACACGCCACATCAGATT 59.402 34.615 0.00 0.00 0.00 2.40
1971 5686 6.112734 TCTTAAATAACACGCCACATCAGAT 58.887 36.000 0.00 0.00 0.00 2.90
1972 5687 5.483811 TCTTAAATAACACGCCACATCAGA 58.516 37.500 0.00 0.00 0.00 3.27
1973 5688 5.794687 TCTTAAATAACACGCCACATCAG 57.205 39.130 0.00 0.00 0.00 2.90
1974 5689 5.935206 TCTTCTTAAATAACACGCCACATCA 59.065 36.000 0.00 0.00 0.00 3.07
1975 5690 6.417191 TCTTCTTAAATAACACGCCACATC 57.583 37.500 0.00 0.00 0.00 3.06
1976 5691 6.811253 TTCTTCTTAAATAACACGCCACAT 57.189 33.333 0.00 0.00 0.00 3.21
1977 5692 6.483974 TCTTTCTTCTTAAATAACACGCCACA 59.516 34.615 0.00 0.00 0.00 4.17
1978 5693 6.894828 TCTTTCTTCTTAAATAACACGCCAC 58.105 36.000 0.00 0.00 0.00 5.01
1979 5694 7.389330 TCATCTTTCTTCTTAAATAACACGCCA 59.611 33.333 0.00 0.00 0.00 5.69
1980 5695 7.748847 TCATCTTTCTTCTTAAATAACACGCC 58.251 34.615 0.00 0.00 0.00 5.68
1981 5696 8.443937 ACTCATCTTTCTTCTTAAATAACACGC 58.556 33.333 0.00 0.00 0.00 5.34
1982 5697 9.746711 CACTCATCTTTCTTCTTAAATAACACG 57.253 33.333 0.00 0.00 0.00 4.49
1989 5704 9.477484 GTCACTACACTCATCTTTCTTCTTAAA 57.523 33.333 0.00 0.00 0.00 1.52
1990 5705 8.088981 GGTCACTACACTCATCTTTCTTCTTAA 58.911 37.037 0.00 0.00 0.00 1.85
1991 5706 7.309867 GGGTCACTACACTCATCTTTCTTCTTA 60.310 40.741 0.00 0.00 0.00 2.10
1992 5707 6.459923 GGTCACTACACTCATCTTTCTTCTT 58.540 40.000 0.00 0.00 0.00 2.52
1993 5708 5.046950 GGGTCACTACACTCATCTTTCTTCT 60.047 44.000 0.00 0.00 0.00 2.85
1994 5709 5.172205 GGGTCACTACACTCATCTTTCTTC 58.828 45.833 0.00 0.00 0.00 2.87
1995 5710 4.593206 TGGGTCACTACACTCATCTTTCTT 59.407 41.667 0.00 0.00 0.00 2.52
1996 5711 4.160329 TGGGTCACTACACTCATCTTTCT 58.840 43.478 0.00 0.00 0.00 2.52
1997 5712 4.220821 TCTGGGTCACTACACTCATCTTTC 59.779 45.833 0.00 0.00 0.00 2.62
1998 5713 4.160329 TCTGGGTCACTACACTCATCTTT 58.840 43.478 0.00 0.00 0.00 2.52
1999 5714 3.779444 TCTGGGTCACTACACTCATCTT 58.221 45.455 0.00 0.00 0.00 2.40
2000 5715 3.458044 TCTGGGTCACTACACTCATCT 57.542 47.619 0.00 0.00 0.00 2.90
2001 5716 4.220821 TCTTTCTGGGTCACTACACTCATC 59.779 45.833 0.00 0.00 0.00 2.92
2002 5717 4.160329 TCTTTCTGGGTCACTACACTCAT 58.840 43.478 0.00 0.00 0.00 2.90
2003 5718 3.572642 TCTTTCTGGGTCACTACACTCA 58.427 45.455 0.00 0.00 0.00 3.41
2004 5719 4.602340 TTCTTTCTGGGTCACTACACTC 57.398 45.455 0.00 0.00 0.00 3.51
2005 5720 4.704965 GTTTCTTTCTGGGTCACTACACT 58.295 43.478 0.00 0.00 0.00 3.55
2006 5721 3.493503 CGTTTCTTTCTGGGTCACTACAC 59.506 47.826 0.00 0.00 0.00 2.90
2007 5722 3.724374 CGTTTCTTTCTGGGTCACTACA 58.276 45.455 0.00 0.00 0.00 2.74
2008 5723 2.479275 GCGTTTCTTTCTGGGTCACTAC 59.521 50.000 0.00 0.00 0.00 2.73
2009 5724 2.367567 AGCGTTTCTTTCTGGGTCACTA 59.632 45.455 0.00 0.00 0.00 2.74
2010 5725 1.141053 AGCGTTTCTTTCTGGGTCACT 59.859 47.619 0.00 0.00 0.00 3.41
2011 5726 1.594331 AGCGTTTCTTTCTGGGTCAC 58.406 50.000 0.00 0.00 0.00 3.67
2012 5727 3.478857 TTAGCGTTTCTTTCTGGGTCA 57.521 42.857 0.00 0.00 0.00 4.02
2013 5728 4.454504 TGATTTAGCGTTTCTTTCTGGGTC 59.545 41.667 0.00 0.00 0.00 4.46
2014 5729 4.394729 TGATTTAGCGTTTCTTTCTGGGT 58.605 39.130 0.00 0.00 0.00 4.51
2015 5730 5.567138 ATGATTTAGCGTTTCTTTCTGGG 57.433 39.130 0.00 0.00 0.00 4.45
2016 5731 8.964420 TTTAATGATTTAGCGTTTCTTTCTGG 57.036 30.769 0.00 0.00 0.00 3.86
2022 5737 9.906660 TGTTTCATTTAATGATTTAGCGTTTCT 57.093 25.926 8.56 0.00 39.39 2.52
2025 5740 9.691362 ACTTGTTTCATTTAATGATTTAGCGTT 57.309 25.926 8.56 0.00 39.39 4.84
2026 5741 9.691362 AACTTGTTTCATTTAATGATTTAGCGT 57.309 25.926 8.56 0.52 39.39 5.07
2034 5749 9.255304 GGTTGCTAAACTTGTTTCATTTAATGA 57.745 29.630 3.20 3.20 36.48 2.57
2035 5750 9.039870 TGGTTGCTAAACTTGTTTCATTTAATG 57.960 29.630 1.72 0.00 36.48 1.90
2036 5751 9.777297 ATGGTTGCTAAACTTGTTTCATTTAAT 57.223 25.926 1.72 0.00 36.48 1.40
2039 5754 9.260002 CTTATGGTTGCTAAACTTGTTTCATTT 57.740 29.630 1.72 0.00 36.48 2.32
2040 5755 7.384932 GCTTATGGTTGCTAAACTTGTTTCATT 59.615 33.333 1.72 0.00 36.48 2.57
2041 5756 6.868339 GCTTATGGTTGCTAAACTTGTTTCAT 59.132 34.615 1.72 2.44 36.48 2.57
2042 5757 6.040391 AGCTTATGGTTGCTAAACTTGTTTCA 59.960 34.615 1.72 0.00 37.81 2.69
2043 5758 6.447162 AGCTTATGGTTGCTAAACTTGTTTC 58.553 36.000 1.72 0.00 37.81 2.78
2044 5759 6.405278 AGCTTATGGTTGCTAAACTTGTTT 57.595 33.333 4.14 4.14 37.81 2.83
2045 5760 7.230712 ACTTAGCTTATGGTTGCTAAACTTGTT 59.769 33.333 0.00 0.00 46.72 2.83
2046 5761 6.715264 ACTTAGCTTATGGTTGCTAAACTTGT 59.285 34.615 0.00 1.65 46.72 3.16
2047 5762 7.145932 ACTTAGCTTATGGTTGCTAAACTTG 57.854 36.000 0.00 1.14 46.72 3.16
2048 5763 7.336176 GGTACTTAGCTTATGGTTGCTAAACTT 59.664 37.037 0.00 0.69 46.72 2.66
2049 5764 6.822170 GGTACTTAGCTTATGGTTGCTAAACT 59.178 38.462 0.00 1.16 46.72 2.66
2050 5765 6.822170 AGGTACTTAGCTTATGGTTGCTAAAC 59.178 38.462 0.00 5.36 46.72 2.01
2051 5766 6.821665 CAGGTACTTAGCTTATGGTTGCTAAA 59.178 38.462 0.00 0.00 46.72 1.85
2052 5767 6.070424 ACAGGTACTTAGCTTATGGTTGCTAA 60.070 38.462 0.00 7.14 45.78 3.09
2053 5768 5.424252 ACAGGTACTTAGCTTATGGTTGCTA 59.576 40.000 0.00 0.00 37.37 3.49
2054 5769 4.225267 ACAGGTACTTAGCTTATGGTTGCT 59.775 41.667 0.00 0.00 39.19 3.91
2055 5770 4.332819 CACAGGTACTTAGCTTATGGTTGC 59.667 45.833 0.00 0.00 34.60 4.17
2056 5771 4.332819 GCACAGGTACTTAGCTTATGGTTG 59.667 45.833 0.00 0.00 34.60 3.77
2057 5772 4.019681 TGCACAGGTACTTAGCTTATGGTT 60.020 41.667 0.00 0.00 34.60 3.67
2058 5773 3.517901 TGCACAGGTACTTAGCTTATGGT 59.482 43.478 0.00 0.00 34.60 3.55
2059 5774 4.137116 TGCACAGGTACTTAGCTTATGG 57.863 45.455 0.00 0.00 34.60 2.74
2060 5775 5.008019 CCAATGCACAGGTACTTAGCTTATG 59.992 44.000 0.00 0.00 34.60 1.90
2061 5776 5.126067 CCAATGCACAGGTACTTAGCTTAT 58.874 41.667 0.00 0.00 34.60 1.73
2062 5777 4.513442 CCAATGCACAGGTACTTAGCTTA 58.487 43.478 0.00 0.00 34.60 3.09
2063 5778 3.347216 CCAATGCACAGGTACTTAGCTT 58.653 45.455 0.00 0.00 34.60 3.74
2064 5779 2.356125 CCCAATGCACAGGTACTTAGCT 60.356 50.000 5.61 0.00 34.60 3.32
2065 5780 2.017049 CCCAATGCACAGGTACTTAGC 58.983 52.381 5.61 0.00 34.60 3.09
2066 5781 2.238646 TCCCCAATGCACAGGTACTTAG 59.761 50.000 5.61 0.00 34.60 2.18
2067 5782 2.238646 CTCCCCAATGCACAGGTACTTA 59.761 50.000 5.61 0.00 34.60 2.24
2068 5783 1.004745 CTCCCCAATGCACAGGTACTT 59.995 52.381 5.61 0.00 34.60 2.24
2069 5784 0.620556 CTCCCCAATGCACAGGTACT 59.379 55.000 5.61 0.00 43.88 2.73
2070 5785 0.328258 ACTCCCCAATGCACAGGTAC 59.672 55.000 5.61 0.00 0.00 3.34
2071 5786 1.959710 TACTCCCCAATGCACAGGTA 58.040 50.000 5.61 0.00 0.00 3.08
2072 5787 1.298953 ATACTCCCCAATGCACAGGT 58.701 50.000 5.61 0.00 0.00 4.00
2073 5788 2.439507 ACTATACTCCCCAATGCACAGG 59.560 50.000 0.00 0.00 0.00 4.00
2074 5789 3.845781 ACTATACTCCCCAATGCACAG 57.154 47.619 0.00 0.00 0.00 3.66
2075 5790 3.884895 CAACTATACTCCCCAATGCACA 58.115 45.455 0.00 0.00 0.00 4.57
2076 5791 2.618709 GCAACTATACTCCCCAATGCAC 59.381 50.000 0.00 0.00 33.00 4.57
2077 5792 2.509548 AGCAACTATACTCCCCAATGCA 59.490 45.455 0.00 0.00 35.11 3.96
2078 5793 3.214696 AGCAACTATACTCCCCAATGC 57.785 47.619 0.00 0.00 0.00 3.56
2079 5794 4.757149 GCTTAGCAACTATACTCCCCAATG 59.243 45.833 0.00 0.00 0.00 2.82
2080 5795 4.660771 AGCTTAGCAACTATACTCCCCAAT 59.339 41.667 7.07 0.00 0.00 3.16
2081 5796 4.037927 AGCTTAGCAACTATACTCCCCAA 58.962 43.478 7.07 0.00 0.00 4.12
2082 5797 3.654273 AGCTTAGCAACTATACTCCCCA 58.346 45.455 7.07 0.00 0.00 4.96
2083 5798 6.361768 AATAGCTTAGCAACTATACTCCCC 57.638 41.667 7.07 0.00 0.00 4.81
2084 5799 9.945904 ATTAAATAGCTTAGCAACTATACTCCC 57.054 33.333 7.07 0.00 0.00 4.30
2098 5813 9.436957 GAGGTGCTAAGCATATTAAATAGCTTA 57.563 33.333 14.27 14.27 44.73 3.09
2100 5815 7.453393 TGAGGTGCTAAGCATATTAAATAGCT 58.547 34.615 0.00 0.00 41.91 3.32
2101 5816 7.672983 TGAGGTGCTAAGCATATTAAATAGC 57.327 36.000 0.00 0.00 41.91 2.97
2102 5817 9.664332 AGATGAGGTGCTAAGCATATTAAATAG 57.336 33.333 0.00 0.00 41.91 1.73
2105 5820 9.494271 CTTAGATGAGGTGCTAAGCATATTAAA 57.506 33.333 0.00 0.00 41.91 1.52
2106 5821 8.651389 ACTTAGATGAGGTGCTAAGCATATTAA 58.349 33.333 0.00 0.00 44.59 1.40
2107 5822 8.195165 ACTTAGATGAGGTGCTAAGCATATTA 57.805 34.615 0.00 0.00 44.59 0.98
2108 5823 7.072263 ACTTAGATGAGGTGCTAAGCATATT 57.928 36.000 0.00 0.00 44.59 1.28
2109 5824 6.678568 ACTTAGATGAGGTGCTAAGCATAT 57.321 37.500 0.00 0.00 44.59 1.78
2110 5825 6.015350 GGTACTTAGATGAGGTGCTAAGCATA 60.015 42.308 0.00 0.00 44.59 3.14
2111 5826 5.221541 GGTACTTAGATGAGGTGCTAAGCAT 60.222 44.000 0.00 0.00 44.59 3.79
2112 5827 4.099573 GGTACTTAGATGAGGTGCTAAGCA 59.900 45.833 0.00 0.00 44.59 3.91
2113 5828 4.501743 GGGTACTTAGATGAGGTGCTAAGC 60.502 50.000 0.00 0.00 44.59 3.09
2114 5829 4.649674 TGGGTACTTAGATGAGGTGCTAAG 59.350 45.833 0.00 0.00 45.63 2.18
2115 5830 4.616553 TGGGTACTTAGATGAGGTGCTAA 58.383 43.478 0.00 0.00 0.00 3.09
2116 5831 4.259933 TGGGTACTTAGATGAGGTGCTA 57.740 45.455 0.00 0.00 0.00 3.49
2117 5832 3.116096 TGGGTACTTAGATGAGGTGCT 57.884 47.619 0.00 0.00 0.00 4.40
2118 5833 4.344102 TGTATGGGTACTTAGATGAGGTGC 59.656 45.833 0.00 0.00 0.00 5.01
2119 5834 6.267699 TGATGTATGGGTACTTAGATGAGGTG 59.732 42.308 0.00 0.00 0.00 4.00
2120 5835 6.382087 TGATGTATGGGTACTTAGATGAGGT 58.618 40.000 0.00 0.00 0.00 3.85
2121 5836 6.918067 TGATGTATGGGTACTTAGATGAGG 57.082 41.667 0.00 0.00 0.00 3.86
2122 5837 7.726216 TGTTGATGTATGGGTACTTAGATGAG 58.274 38.462 0.00 0.00 0.00 2.90
2123 5838 7.344612 ACTGTTGATGTATGGGTACTTAGATGA 59.655 37.037 0.00 0.00 0.00 2.92
2124 5839 7.500992 ACTGTTGATGTATGGGTACTTAGATG 58.499 38.462 0.00 0.00 0.00 2.90
2125 5840 7.676683 ACTGTTGATGTATGGGTACTTAGAT 57.323 36.000 0.00 0.00 0.00 1.98
2126 5841 7.201884 GCTACTGTTGATGTATGGGTACTTAGA 60.202 40.741 0.00 0.00 0.00 2.10
2127 5842 6.924060 GCTACTGTTGATGTATGGGTACTTAG 59.076 42.308 0.00 0.00 0.00 2.18
2128 5843 6.183360 GGCTACTGTTGATGTATGGGTACTTA 60.183 42.308 0.00 0.00 0.00 2.24
2129 5844 5.396436 GGCTACTGTTGATGTATGGGTACTT 60.396 44.000 0.00 0.00 0.00 2.24
2130 5845 4.101119 GGCTACTGTTGATGTATGGGTACT 59.899 45.833 0.00 0.00 0.00 2.73
2131 5846 4.141801 TGGCTACTGTTGATGTATGGGTAC 60.142 45.833 0.00 0.00 0.00 3.34
2132 5847 4.034410 TGGCTACTGTTGATGTATGGGTA 58.966 43.478 0.00 0.00 0.00 3.69
2133 5848 2.843730 TGGCTACTGTTGATGTATGGGT 59.156 45.455 0.00 0.00 0.00 4.51
2134 5849 3.558931 TGGCTACTGTTGATGTATGGG 57.441 47.619 0.00 0.00 0.00 4.00
2135 5850 4.260985 TGTTGGCTACTGTTGATGTATGG 58.739 43.478 0.01 0.00 0.00 2.74
2136 5851 4.937620 ACTGTTGGCTACTGTTGATGTATG 59.062 41.667 5.84 0.00 35.64 2.39
2137 5852 5.165961 ACTGTTGGCTACTGTTGATGTAT 57.834 39.130 5.84 0.00 35.64 2.29
2138 5853 4.617253 ACTGTTGGCTACTGTTGATGTA 57.383 40.909 5.84 0.00 35.64 2.29
2139 5854 3.492102 ACTGTTGGCTACTGTTGATGT 57.508 42.857 5.84 0.00 35.64 3.06
2140 5855 3.372206 GCTACTGTTGGCTACTGTTGATG 59.628 47.826 19.24 9.32 39.36 3.07
2141 5856 3.600388 GCTACTGTTGGCTACTGTTGAT 58.400 45.455 19.24 0.07 39.36 2.57
2142 5857 2.289444 GGCTACTGTTGGCTACTGTTGA 60.289 50.000 19.24 3.87 39.36 3.18
2143 5858 2.076863 GGCTACTGTTGGCTACTGTTG 58.923 52.381 15.55 14.39 39.36 3.33
2144 5859 1.978580 AGGCTACTGTTGGCTACTGTT 59.021 47.619 15.91 2.61 39.36 3.16
2145 5860 1.550976 GAGGCTACTGTTGGCTACTGT 59.449 52.381 17.24 14.85 40.49 3.55
2146 5861 1.550524 TGAGGCTACTGTTGGCTACTG 59.449 52.381 17.24 4.58 40.49 2.74
2147 5862 1.827969 CTGAGGCTACTGTTGGCTACT 59.172 52.381 17.24 0.00 40.49 2.57
2148 5863 1.825474 TCTGAGGCTACTGTTGGCTAC 59.175 52.381 17.24 11.68 40.49 3.58
2149 5864 2.231716 TCTGAGGCTACTGTTGGCTA 57.768 50.000 17.24 0.87 40.49 3.93
2150 5865 1.002544 GTTCTGAGGCTACTGTTGGCT 59.997 52.381 17.24 17.24 43.15 4.75
2151 5866 1.002544 AGTTCTGAGGCTACTGTTGGC 59.997 52.381 7.67 7.67 0.00 4.52
2152 5867 2.300152 TGAGTTCTGAGGCTACTGTTGG 59.700 50.000 0.00 0.00 0.00 3.77
2153 5868 3.256879 TCTGAGTTCTGAGGCTACTGTTG 59.743 47.826 0.00 0.00 0.00 3.33
2154 5869 3.501349 TCTGAGTTCTGAGGCTACTGTT 58.499 45.455 0.00 0.00 0.00 3.16
2155 5870 3.162147 TCTGAGTTCTGAGGCTACTGT 57.838 47.619 0.00 0.00 0.00 3.55
2156 5871 3.675775 GCTTCTGAGTTCTGAGGCTACTG 60.676 52.174 13.37 0.00 41.41 2.74
2157 5872 2.495669 GCTTCTGAGTTCTGAGGCTACT 59.504 50.000 13.37 0.00 41.41 2.57
2158 5873 2.232452 TGCTTCTGAGTTCTGAGGCTAC 59.768 50.000 18.77 0.00 43.69 3.58
2159 5874 2.232452 GTGCTTCTGAGTTCTGAGGCTA 59.768 50.000 18.77 7.49 43.69 3.93
2160 5875 1.001860 GTGCTTCTGAGTTCTGAGGCT 59.998 52.381 18.77 0.00 43.69 4.58
2161 5876 1.437625 GTGCTTCTGAGTTCTGAGGC 58.562 55.000 13.65 13.65 43.64 4.70
2162 5877 1.270826 TCGTGCTTCTGAGTTCTGAGG 59.729 52.381 0.00 0.00 0.00 3.86
2163 5878 2.713895 TCGTGCTTCTGAGTTCTGAG 57.286 50.000 0.00 0.00 0.00 3.35
2164 5879 2.094494 GGATCGTGCTTCTGAGTTCTGA 60.094 50.000 0.00 0.00 0.00 3.27
2165 5880 2.266554 GGATCGTGCTTCTGAGTTCTG 58.733 52.381 0.00 0.00 0.00 3.02
2166 5881 1.895798 TGGATCGTGCTTCTGAGTTCT 59.104 47.619 0.00 0.00 0.00 3.01
2167 5882 2.370281 TGGATCGTGCTTCTGAGTTC 57.630 50.000 0.00 0.00 0.00 3.01
2168 5883 3.340814 AATGGATCGTGCTTCTGAGTT 57.659 42.857 0.00 0.00 0.00 3.01
2169 5884 4.471904 TTAATGGATCGTGCTTCTGAGT 57.528 40.909 0.00 0.00 0.00 3.41
2170 5885 5.998454 AATTAATGGATCGTGCTTCTGAG 57.002 39.130 0.00 0.00 0.00 3.35
2171 5886 6.757897 AAAATTAATGGATCGTGCTTCTGA 57.242 33.333 0.00 0.00 0.00 3.27
2193 5908 4.510340 GCGCTTCTATTCTATCCGGAAAAA 59.490 41.667 9.01 3.26 0.00 1.94
2194 5909 4.056050 GCGCTTCTATTCTATCCGGAAAA 58.944 43.478 9.01 3.68 0.00 2.29
2195 5910 3.069016 TGCGCTTCTATTCTATCCGGAAA 59.931 43.478 9.01 0.00 0.00 3.13
2196 5911 2.626266 TGCGCTTCTATTCTATCCGGAA 59.374 45.455 9.01 0.00 0.00 4.30
2197 5912 2.235891 TGCGCTTCTATTCTATCCGGA 58.764 47.619 6.61 6.61 0.00 5.14
2198 5913 2.724977 TGCGCTTCTATTCTATCCGG 57.275 50.000 9.73 0.00 0.00 5.14
2199 5914 3.614616 GGATTGCGCTTCTATTCTATCCG 59.385 47.826 9.73 0.00 0.00 4.18
2200 5915 4.390297 GTGGATTGCGCTTCTATTCTATCC 59.610 45.833 9.73 7.41 33.48 2.59
2201 5916 4.090642 CGTGGATTGCGCTTCTATTCTATC 59.909 45.833 9.73 0.00 0.00 2.08
2202 5917 3.990469 CGTGGATTGCGCTTCTATTCTAT 59.010 43.478 9.73 0.00 0.00 1.98
2203 5918 3.181479 ACGTGGATTGCGCTTCTATTCTA 60.181 43.478 9.73 0.00 0.00 2.10
2204 5919 2.205074 CGTGGATTGCGCTTCTATTCT 58.795 47.619 9.73 0.00 0.00 2.40
2205 5920 1.933853 ACGTGGATTGCGCTTCTATTC 59.066 47.619 9.73 0.00 0.00 1.75
2206 5921 2.024176 ACGTGGATTGCGCTTCTATT 57.976 45.000 9.73 0.00 0.00 1.73
2207 5922 1.665679 CAACGTGGATTGCGCTTCTAT 59.334 47.619 9.73 0.00 0.00 1.98
2208 5923 1.075542 CAACGTGGATTGCGCTTCTA 58.924 50.000 9.73 0.23 0.00 2.10
2209 5924 1.577328 CCAACGTGGATTGCGCTTCT 61.577 55.000 9.73 0.00 40.96 2.85
2210 5925 1.154225 CCAACGTGGATTGCGCTTC 60.154 57.895 9.73 5.59 40.96 3.86
2211 5926 2.953821 CCAACGTGGATTGCGCTT 59.046 55.556 9.73 0.00 40.96 4.68
2212 5927 3.737172 GCCAACGTGGATTGCGCT 61.737 61.111 9.73 0.00 40.96 5.92
2213 5928 3.737172 AGCCAACGTGGATTGCGC 61.737 61.111 0.00 0.00 40.96 6.09
2214 5929 2.176546 CAGCCAACGTGGATTGCG 59.823 61.111 8.04 0.00 40.96 4.85
2215 5930 1.210155 GTCAGCCAACGTGGATTGC 59.790 57.895 8.04 0.00 40.96 3.56
2216 5931 1.732259 GTAGTCAGCCAACGTGGATTG 59.268 52.381 8.04 5.72 40.96 2.67
2217 5932 1.623811 AGTAGTCAGCCAACGTGGATT 59.376 47.619 8.04 0.00 40.96 3.01
2218 5933 1.066858 CAGTAGTCAGCCAACGTGGAT 60.067 52.381 8.04 0.00 40.96 3.41
2219 5934 0.317160 CAGTAGTCAGCCAACGTGGA 59.683 55.000 8.04 0.00 40.96 4.02
2220 5935 0.317160 TCAGTAGTCAGCCAACGTGG 59.683 55.000 0.00 0.00 41.55 4.94
2221 5936 1.995484 CATCAGTAGTCAGCCAACGTG 59.005 52.381 0.00 0.00 0.00 4.49
2222 5937 1.618837 ACATCAGTAGTCAGCCAACGT 59.381 47.619 0.00 0.00 0.00 3.99
2223 5938 1.995484 CACATCAGTAGTCAGCCAACG 59.005 52.381 0.00 0.00 0.00 4.10
2224 5939 2.996621 GTCACATCAGTAGTCAGCCAAC 59.003 50.000 0.00 0.00 0.00 3.77
2225 5940 2.028112 GGTCACATCAGTAGTCAGCCAA 60.028 50.000 0.00 0.00 0.00 4.52
2226 5941 1.550524 GGTCACATCAGTAGTCAGCCA 59.449 52.381 0.00 0.00 0.00 4.75
2227 5942 1.550524 TGGTCACATCAGTAGTCAGCC 59.449 52.381 0.00 0.00 0.00 4.85
2228 5943 3.533606 ATGGTCACATCAGTAGTCAGC 57.466 47.619 0.00 0.00 29.20 4.26
2265 5980 8.823818 GGACTAGCGTGTATGTACAATTTAAAT 58.176 33.333 0.00 0.00 38.04 1.40
2266 5981 8.036575 AGGACTAGCGTGTATGTACAATTTAAA 58.963 33.333 0.00 0.00 38.04 1.52
2267 5982 7.549839 AGGACTAGCGTGTATGTACAATTTAA 58.450 34.615 0.00 0.00 38.04 1.52
2268 5983 7.104043 AGGACTAGCGTGTATGTACAATTTA 57.896 36.000 0.00 0.00 38.04 1.40
2269 5984 5.974108 AGGACTAGCGTGTATGTACAATTT 58.026 37.500 0.00 0.00 38.04 1.82
2270 5985 5.593679 AGGACTAGCGTGTATGTACAATT 57.406 39.130 0.00 0.00 38.04 2.32
2271 5986 6.704289 TTAGGACTAGCGTGTATGTACAAT 57.296 37.500 0.00 0.00 38.04 2.71
2272 5987 6.513806 TTTAGGACTAGCGTGTATGTACAA 57.486 37.500 0.00 0.00 38.04 2.41
2273 5988 6.704289 ATTTAGGACTAGCGTGTATGTACA 57.296 37.500 0.00 0.00 0.00 2.90
2274 5989 9.688592 ATTTATTTAGGACTAGCGTGTATGTAC 57.311 33.333 0.00 0.00 0.00 2.90
2275 5990 9.687210 CATTTATTTAGGACTAGCGTGTATGTA 57.313 33.333 0.00 0.00 0.00 2.29
2276 5991 8.418662 TCATTTATTTAGGACTAGCGTGTATGT 58.581 33.333 0.00 0.00 0.00 2.29
2277 5992 8.812147 TCATTTATTTAGGACTAGCGTGTATG 57.188 34.615 0.00 0.00 0.00 2.39
2278 5993 9.826574 TTTCATTTATTTAGGACTAGCGTGTAT 57.173 29.630 0.00 0.00 0.00 2.29
2279 5994 9.656040 TTTTCATTTATTTAGGACTAGCGTGTA 57.344 29.630 0.00 0.00 0.00 2.90
2280 5995 8.448615 GTTTTCATTTATTTAGGACTAGCGTGT 58.551 33.333 0.00 0.00 0.00 4.49
2281 5996 7.908601 GGTTTTCATTTATTTAGGACTAGCGTG 59.091 37.037 0.00 0.00 0.00 5.34
2282 5997 7.608761 TGGTTTTCATTTATTTAGGACTAGCGT 59.391 33.333 0.00 0.00 0.00 5.07
2283 5998 7.908601 GTGGTTTTCATTTATTTAGGACTAGCG 59.091 37.037 0.00 0.00 0.00 4.26
2284 5999 8.957466 AGTGGTTTTCATTTATTTAGGACTAGC 58.043 33.333 0.00 0.00 0.00 3.42
2287 6002 8.793592 GTGAGTGGTTTTCATTTATTTAGGACT 58.206 33.333 0.00 0.00 0.00 3.85
2288 6003 8.573035 TGTGAGTGGTTTTCATTTATTTAGGAC 58.427 33.333 0.00 0.00 0.00 3.85
2289 6004 8.698973 TGTGAGTGGTTTTCATTTATTTAGGA 57.301 30.769 0.00 0.00 0.00 2.94
2319 6034 7.271653 GCGTTAACATTTCCGTTCATTTATGAA 59.728 33.333 6.39 1.12 43.94 2.57
2320 6035 6.743627 GCGTTAACATTTCCGTTCATTTATGA 59.256 34.615 6.39 0.00 34.44 2.15
2321 6036 6.020995 GGCGTTAACATTTCCGTTCATTTATG 60.021 38.462 6.39 0.00 0.00 1.90
2322 6037 6.031471 GGCGTTAACATTTCCGTTCATTTAT 58.969 36.000 6.39 0.00 0.00 1.40
2323 6038 5.392286 GGCGTTAACATTTCCGTTCATTTA 58.608 37.500 6.39 0.00 0.00 1.40
2324 6039 4.231439 GGCGTTAACATTTCCGTTCATTT 58.769 39.130 6.39 0.00 0.00 2.32
2325 6040 3.366577 GGGCGTTAACATTTCCGTTCATT 60.367 43.478 6.39 0.00 0.00 2.57
2326 6041 2.162809 GGGCGTTAACATTTCCGTTCAT 59.837 45.455 6.39 0.00 0.00 2.57
2327 6042 1.536331 GGGCGTTAACATTTCCGTTCA 59.464 47.619 6.39 0.00 0.00 3.18
2328 6043 1.536331 TGGGCGTTAACATTTCCGTTC 59.464 47.619 6.39 0.00 0.00 3.95
2329 6044 1.267533 GTGGGCGTTAACATTTCCGTT 59.732 47.619 6.39 0.00 0.00 4.44
2356 6071 0.249398 GTACGGAGTGGTGAATGCCT 59.751 55.000 0.00 0.00 45.73 4.75
2360 6075 1.336517 CGTGTGTACGGAGTGGTGAAT 60.337 52.381 0.00 0.00 45.73 2.57
2374 6089 2.606961 CGGTGATGCTTGCGTGTGT 61.607 57.895 0.00 0.00 0.00 3.72
2389 6104 0.526662 TGCAAAACGAAACCAACGGT 59.473 45.000 0.00 0.00 37.65 4.83
2444 6160 2.683968 GCACACTAGAATCGTCCAACA 58.316 47.619 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.