Multiple sequence alignment - TraesCS7A01G497100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G497100 chr7A 100.000 5161 0 0 1 5161 686742751 686737591 0.000000e+00 9494
1 TraesCS7A01G497100 chr7A 96.536 4879 147 12 1 4866 60276710 60281579 0.000000e+00 8054
2 TraesCS7A01G497100 chr7A 100.000 285 0 0 4877 5161 686647880 686647596 1.270000e-145 527
3 TraesCS7A01G497100 chr7A 100.000 285 0 0 4877 5161 686649099 686648815 1.270000e-145 527
4 TraesCS7A01G497100 chr7D 97.045 4873 126 10 1 4866 382047484 382052345 0.000000e+00 8185
5 TraesCS7A01G497100 chr7D 96.899 4870 132 8 1 4866 381976358 381971504 0.000000e+00 8139
6 TraesCS7A01G497100 chr7D 96.736 4872 144 8 1 4866 203497403 203502265 0.000000e+00 8102
7 TraesCS7A01G497100 chr7D 97.895 285 5 1 4877 5161 381921857 381922140 4.640000e-135 492
8 TraesCS7A01G497100 chr7D 97.895 285 5 1 4877 5161 381972087 381971804 4.640000e-135 492
9 TraesCS7A01G497100 chr6D 97.023 4870 132 7 1 4866 124514928 124519788 0.000000e+00 8178
10 TraesCS7A01G497100 chr5A 96.846 4883 129 11 1 4866 19251451 19246577 0.000000e+00 8141
11 TraesCS7A01G497100 chr7B 96.740 4878 139 9 1 4866 742986842 742991711 0.000000e+00 8109
12 TraesCS7A01G497100 chr7B 96.679 4878 141 10 1 4866 716881383 716876515 0.000000e+00 8091
13 TraesCS7A01G497100 chr7B 98.246 285 4 1 4877 5161 742991128 742991411 9.980000e-137 497
14 TraesCS7A01G497100 chr1A 96.658 4877 141 11 1 4866 498693825 498688960 0.000000e+00 8083
15 TraesCS7A01G497100 chrUn 100.000 285 0 0 4877 5161 339525151 339525435 1.270000e-145 527
16 TraesCS7A01G497100 chrUn 100.000 285 0 0 4877 5161 339527718 339528002 1.270000e-145 527
17 TraesCS7A01G497100 chrUn 100.000 285 0 0 4877 5161 387135948 387135664 1.270000e-145 527
18 TraesCS7A01G497100 chrUn 97.895 285 5 1 4877 5161 186206738 186206455 4.640000e-135 492
19 TraesCS7A01G497100 chrUn 97.895 285 5 1 4877 5161 434805253 434805536 4.640000e-135 492


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G497100 chr7A 686737591 686742751 5160 True 9494 9494 100.000 1 5161 1 chr7A.!!$R1 5160
1 TraesCS7A01G497100 chr7A 60276710 60281579 4869 False 8054 8054 96.536 1 4866 1 chr7A.!!$F1 4865
2 TraesCS7A01G497100 chr7A 686647596 686649099 1503 True 527 527 100.000 4877 5161 2 chr7A.!!$R2 284
3 TraesCS7A01G497100 chr7D 382047484 382052345 4861 False 8185 8185 97.045 1 4866 1 chr7D.!!$F3 4865
4 TraesCS7A01G497100 chr7D 381971504 381976358 4854 True 8139 8139 96.899 1 4866 1 chr7D.!!$R1 4865
5 TraesCS7A01G497100 chr7D 203497403 203502265 4862 False 8102 8102 96.736 1 4866 1 chr7D.!!$F1 4865
6 TraesCS7A01G497100 chr6D 124514928 124519788 4860 False 8178 8178 97.023 1 4866 1 chr6D.!!$F1 4865
7 TraesCS7A01G497100 chr5A 19246577 19251451 4874 True 8141 8141 96.846 1 4866 1 chr5A.!!$R1 4865
8 TraesCS7A01G497100 chr7B 716876515 716881383 4868 True 8091 8091 96.679 1 4866 1 chr7B.!!$R1 4865
9 TraesCS7A01G497100 chr7B 742986842 742991711 4869 False 4303 8109 97.493 1 5161 2 chr7B.!!$F1 5160
10 TraesCS7A01G497100 chr1A 498688960 498693825 4865 True 8083 8083 96.658 1 4866 1 chr1A.!!$R1 4865
11 TraesCS7A01G497100 chrUn 339525151 339528002 2851 False 527 527 100.000 4877 5161 2 chrUn.!!$F2 284

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 767 0.181114 ACTGTCTTGAGTGCCTTGCA 59.819 50.0 0.00 0.0 35.60 4.08 F
1571 1580 0.111061 ACTGTTTGCAGCATGGGAGA 59.889 50.0 0.00 0.0 46.30 3.71 F
1879 1889 0.390209 CCATTTCCTTGGCGGCTTTG 60.390 55.0 11.43 0.0 0.00 2.77 F
3340 3366 0.391661 GCCGAGAGCAGACCAAATGA 60.392 55.0 0.00 0.0 42.97 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1860 1870 0.390209 CAAAGCCGCCAAGGAAATGG 60.390 55.000 0.0 0.0 45.00 3.16 R
2970 2994 0.892755 TGAACGTCGGTAGGCATTCT 59.107 50.000 0.0 0.0 0.00 2.40 R
3610 3639 1.269257 GCGCAATAGAAAGGAATGCCC 60.269 52.381 0.3 0.0 33.55 5.36 R
4637 4666 0.035056 ATTTCTCTGTGCCCCTTCCG 60.035 55.000 0.0 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
357 362 2.119495 GAATCCTGCCTCTCCCACTTA 58.881 52.381 0.00 0.00 0.00 2.24
386 391 9.234827 GTAGACTTAAGAGAAGAGAAAGTAGGT 57.765 37.037 10.09 0.00 30.83 3.08
397 402 2.502130 AGAAAGTAGGTGGAAGCCTAGC 59.498 50.000 0.00 0.00 41.38 3.42
482 491 6.127403 CGTTTTAGAGAGGTTGTCGAAAAAG 58.873 40.000 0.00 0.00 0.00 2.27
496 505 8.756864 GTTGTCGAAAAAGGATGATCTATAGAC 58.243 37.037 4.10 0.16 0.00 2.59
645 654 3.630769 ACATACGATAGACGAAGGAAGCA 59.369 43.478 0.00 0.00 45.77 3.91
652 661 2.113243 GACGAAGGAAGCACCCACCT 62.113 60.000 0.00 0.00 40.05 4.00
758 767 0.181114 ACTGTCTTGAGTGCCTTGCA 59.819 50.000 0.00 0.00 35.60 4.08
784 793 3.072915 TCAAGAACAAGCAAGGGATGAGA 59.927 43.478 0.00 0.00 0.00 3.27
840 849 2.168728 GGGAAGGCTAGTTTGATCGAGT 59.831 50.000 0.00 0.00 0.00 4.18
844 853 6.239232 GGGAAGGCTAGTTTGATCGAGTATTA 60.239 42.308 0.00 0.00 0.00 0.98
875 884 4.567747 GGGAGAGGTGGAATAAAAAGCTCA 60.568 45.833 4.19 0.00 40.16 4.26
908 917 0.666577 AGTCTTTGTGCGAGCCGTAC 60.667 55.000 8.43 8.43 42.37 3.67
909 918 1.731613 TCTTTGTGCGAGCCGTACG 60.732 57.895 8.69 8.69 44.75 3.67
910 919 2.019951 CTTTGTGCGAGCCGTACGT 61.020 57.895 15.21 0.00 44.75 3.57
911 920 0.730155 CTTTGTGCGAGCCGTACGTA 60.730 55.000 15.21 0.00 44.75 3.57
1033 1042 2.042569 TCTACTGGAGCTACCCACTTCA 59.957 50.000 0.00 0.00 38.00 3.02
1036 1045 2.026822 ACTGGAGCTACCCACTTCAATG 60.027 50.000 0.00 0.00 38.00 2.82
1101 1110 7.369551 TCGATCTAGTGGTATTTTTATGGGT 57.630 36.000 0.00 0.00 0.00 4.51
1154 1163 6.061441 TCAAGATTACTGCAGTTCCTTTTCA 58.939 36.000 27.06 0.09 0.00 2.69
1158 1167 1.321474 CTGCAGTTCCTTTTCAGGCA 58.679 50.000 5.25 0.00 40.58 4.75
1215 1224 2.745037 GTGGGTGGTACCGCTCAA 59.255 61.111 29.34 11.26 38.77 3.02
1240 1249 0.548510 GGCCAATCCTCCTAACTGCT 59.451 55.000 0.00 0.00 0.00 4.24
1363 1372 1.142748 CAGCTGCCCGACTAGAAGG 59.857 63.158 0.00 0.00 0.00 3.46
1439 1448 3.381949 CCGGGTGAATCGAAGTTATCTC 58.618 50.000 0.00 0.00 0.00 2.75
1497 1506 0.660488 GTGGAATCACGCAACACACA 59.340 50.000 0.00 0.00 33.87 3.72
1571 1580 0.111061 ACTGTTTGCAGCATGGGAGA 59.889 50.000 0.00 0.00 46.30 3.71
1730 1739 1.476845 TACCGAACCAGCAGCCTTCA 61.477 55.000 0.00 0.00 0.00 3.02
1731 1740 1.377725 CCGAACCAGCAGCCTTCAT 60.378 57.895 0.00 0.00 0.00 2.57
1740 1750 3.446570 AGCCTTCATGCCAAGCGC 61.447 61.111 0.00 0.00 38.31 5.92
1860 1870 4.065789 ACTTGATGAAAGGGAACGAACTC 58.934 43.478 0.00 0.00 40.51 3.01
1879 1889 0.390209 CCATTTCCTTGGCGGCTTTG 60.390 55.000 11.43 0.00 0.00 2.77
1883 1893 3.683937 CCTTGGCGGCTTTGTGGG 61.684 66.667 11.43 0.00 0.00 4.61
1965 1975 1.481802 CGAGGGTTAGGGTATAGGCCA 60.482 57.143 5.01 0.00 0.00 5.36
2077 2087 0.749049 ATTCGTCGCCCTACCCTAAC 59.251 55.000 0.00 0.00 0.00 2.34
2650 2671 1.826720 GCCAATGAAATGAAGGCCTCA 59.173 47.619 5.23 6.53 39.42 3.86
2759 2780 2.037687 TTCCCCTCTAACGCGGGA 59.962 61.111 12.47 1.75 44.37 5.14
2924 2948 1.875488 GTAGCTAGGACCCCTCCAAA 58.125 55.000 0.00 0.00 39.39 3.28
2979 3003 5.456921 AAAGGAGAATTCCAGAATGCCTA 57.543 39.130 0.65 0.00 46.64 3.93
3067 3093 2.035449 GCTGGGTAAGGAAAACGCTTTT 59.965 45.455 0.00 0.00 35.12 2.27
3170 3196 7.278868 CCTGCTGACGTTCTAATAAAGAATTCT 59.721 37.037 0.88 0.88 45.84 2.40
3177 3203 6.475727 CGTTCTAATAAAGAATTCTGGCTCGA 59.524 38.462 9.17 0.00 45.84 4.04
3259 3285 0.890542 TGAGCAGCAAGTTCGGCATT 60.891 50.000 0.00 0.00 0.00 3.56
3267 3293 4.094887 CAGCAAGTTCGGCATTTACTACAT 59.905 41.667 0.00 0.00 0.00 2.29
3330 3356 2.268920 GTGGAATGGCCGAGAGCA 59.731 61.111 0.00 0.00 46.50 4.26
3340 3366 0.391661 GCCGAGAGCAGACCAAATGA 60.392 55.000 0.00 0.00 42.97 2.57
3380 3406 4.017808 AGAGTGGAGTTACGTGAATAGCT 58.982 43.478 0.00 0.00 0.00 3.32
3385 3411 4.219944 TGGAGTTACGTGAATAGCTGTCTT 59.780 41.667 0.00 0.00 0.00 3.01
3552 3581 2.778270 TCTCCCTCGGACTCAATCTCTA 59.222 50.000 0.00 0.00 0.00 2.43
3707 3736 5.478679 TGGGGGTACATTACAACAAATCTTG 59.521 40.000 0.00 0.00 0.00 3.02
3840 3869 2.443255 ACTGGTTTCTCATGTGGAACCT 59.557 45.455 29.39 14.34 34.36 3.50
3845 3874 5.014123 TGGTTTCTCATGTGGAACCTTAGAT 59.986 40.000 29.39 0.00 34.36 1.98
3950 3979 5.008217 GCAAACCCGTGTCAAATATATAGCA 59.992 40.000 0.00 0.00 0.00 3.49
3967 3996 0.179073 GCAGATTTGGGCGCTCTAGA 60.179 55.000 9.62 0.00 0.00 2.43
3971 4000 1.666189 GATTTGGGCGCTCTAGACAAC 59.334 52.381 9.62 0.00 0.00 3.32
4072 4101 7.644490 TGTAGCAAATTCTATTTGTTGTTCGT 58.356 30.769 12.26 0.00 0.00 3.85
4077 4106 4.640805 TTCTATTTGTTGTTCGTCGCTC 57.359 40.909 0.00 0.00 0.00 5.03
4110 4139 2.761208 GCTTACTTCCTAGCCTCAGTGA 59.239 50.000 0.00 0.00 0.00 3.41
4235 4264 3.187022 CGAATCAGTTGCAACACAGATGA 59.813 43.478 30.11 23.29 0.00 2.92
4261 4290 2.699954 CATGCTACGAAAGACAGGGTT 58.300 47.619 0.00 0.00 0.00 4.11
4385 4414 1.448013 GGACTCCCAGTTACTGCGC 60.448 63.158 6.88 0.00 0.00 6.09
4386 4415 1.292223 GACTCCCAGTTACTGCGCA 59.708 57.895 10.98 10.98 0.00 6.09
4387 4416 1.004918 ACTCCCAGTTACTGCGCAC 60.005 57.895 5.66 0.00 0.00 5.34
4388 4417 2.048597 TCCCAGTTACTGCGCACG 60.049 61.111 5.66 5.54 0.00 5.34
4389 4418 2.048597 CCCAGTTACTGCGCACGA 60.049 61.111 5.66 0.00 0.00 4.35
4390 4419 1.447838 CCCAGTTACTGCGCACGAT 60.448 57.895 5.66 0.00 0.00 3.73
4391 4420 1.421410 CCCAGTTACTGCGCACGATC 61.421 60.000 5.66 0.00 0.00 3.69
4392 4421 1.625870 CAGTTACTGCGCACGATCG 59.374 57.895 14.88 14.88 0.00 3.69
4393 4422 1.071019 CAGTTACTGCGCACGATCGT 61.071 55.000 16.60 16.60 0.00 3.73
4394 4423 0.448990 AGTTACTGCGCACGATCGTA 59.551 50.000 22.26 3.77 0.00 3.43
4395 4424 1.065102 AGTTACTGCGCACGATCGTAT 59.935 47.619 22.26 5.10 0.00 3.06
4396 4425 2.288729 AGTTACTGCGCACGATCGTATA 59.711 45.455 22.26 6.59 0.00 1.47
4397 4426 2.305252 TACTGCGCACGATCGTATAC 57.695 50.000 22.26 13.11 0.00 1.47
4398 4427 0.661552 ACTGCGCACGATCGTATACT 59.338 50.000 22.26 0.00 0.00 2.12
4399 4428 1.045477 CTGCGCACGATCGTATACTG 58.955 55.000 22.26 9.46 0.00 2.74
4400 4429 0.658897 TGCGCACGATCGTATACTGA 59.341 50.000 22.26 0.00 0.00 3.41
4401 4430 1.319172 GCGCACGATCGTATACTGAG 58.681 55.000 22.26 11.10 0.00 3.35
4402 4431 1.951792 CGCACGATCGTATACTGAGG 58.048 55.000 22.26 7.02 0.00 3.86
4403 4432 1.263484 CGCACGATCGTATACTGAGGT 59.737 52.381 22.26 0.00 0.00 3.85
4404 4433 2.651701 GCACGATCGTATACTGAGGTG 58.348 52.381 22.26 5.53 0.00 4.00
4405 4434 2.651701 CACGATCGTATACTGAGGTGC 58.348 52.381 22.26 0.00 0.00 5.01
4406 4435 2.290916 CACGATCGTATACTGAGGTGCT 59.709 50.000 22.26 0.00 0.00 4.40
4407 4436 2.548904 ACGATCGTATACTGAGGTGCTC 59.451 50.000 21.32 0.00 0.00 4.26
4408 4437 2.095668 CGATCGTATACTGAGGTGCTCC 60.096 54.545 7.03 0.00 0.00 4.70
4409 4438 1.688772 TCGTATACTGAGGTGCTCCC 58.311 55.000 0.00 0.00 0.00 4.30
4410 4439 0.674534 CGTATACTGAGGTGCTCCCC 59.325 60.000 0.00 0.00 0.00 4.81
4411 4440 0.674534 GTATACTGAGGTGCTCCCCG 59.325 60.000 0.00 0.00 0.00 5.73
4412 4441 0.260816 TATACTGAGGTGCTCCCCGT 59.739 55.000 0.00 0.00 0.00 5.28
4413 4442 1.043673 ATACTGAGGTGCTCCCCGTC 61.044 60.000 0.00 0.00 0.00 4.79
4414 4443 4.135153 CTGAGGTGCTCCCCGTCG 62.135 72.222 0.00 0.00 0.00 5.12
4422 4451 4.388499 CTCCCCGTCGGTGGTTGG 62.388 72.222 11.06 3.71 0.00 3.77
4423 4452 4.938074 TCCCCGTCGGTGGTTGGA 62.938 66.667 11.06 6.31 0.00 3.53
4424 4453 3.943691 CCCCGTCGGTGGTTGGAA 61.944 66.667 11.06 0.00 0.00 3.53
4425 4454 2.667199 CCCGTCGGTGGTTGGAAC 60.667 66.667 11.06 0.00 0.00 3.62
4426 4455 3.039588 CCGTCGGTGGTTGGAACG 61.040 66.667 2.08 0.00 0.00 3.95
4427 4456 2.027897 CGTCGGTGGTTGGAACGA 59.972 61.111 0.00 0.00 0.00 3.85
4428 4457 3.633951 GTCGGTGGTTGGAACGAC 58.366 61.111 0.00 0.00 46.89 4.34
4429 4458 2.027897 TCGGTGGTTGGAACGACG 59.972 61.111 0.00 0.00 38.35 5.12
4430 4459 2.279650 CGGTGGTTGGAACGACGT 60.280 61.111 0.00 0.00 38.35 4.34
4431 4460 2.591311 CGGTGGTTGGAACGACGTG 61.591 63.158 0.00 0.00 38.35 4.49
4432 4461 1.227321 GGTGGTTGGAACGACGTGA 60.227 57.895 0.00 0.00 38.35 4.35
4433 4462 1.219522 GGTGGTTGGAACGACGTGAG 61.220 60.000 0.00 0.00 38.35 3.51
4434 4463 1.593209 TGGTTGGAACGACGTGAGC 60.593 57.895 0.00 0.00 0.00 4.26
4435 4464 2.315386 GGTTGGAACGACGTGAGCC 61.315 63.158 0.00 4.49 0.00 4.70
4436 4465 2.355363 TTGGAACGACGTGAGCCG 60.355 61.111 0.00 0.00 44.03 5.52
4437 4466 3.851845 TTGGAACGACGTGAGCCGG 62.852 63.158 0.00 0.00 42.24 6.13
4454 4483 4.162690 GGCCGTGCCTCGATTCCT 62.163 66.667 7.58 0.00 46.69 3.36
4455 4484 2.125106 GCCGTGCCTCGATTCCTT 60.125 61.111 0.02 0.00 42.86 3.36
4456 4485 1.745489 GCCGTGCCTCGATTCCTTT 60.745 57.895 0.02 0.00 42.86 3.11
4457 4486 1.706287 GCCGTGCCTCGATTCCTTTC 61.706 60.000 0.02 0.00 42.86 2.62
4458 4487 0.391130 CCGTGCCTCGATTCCTTTCA 60.391 55.000 0.02 0.00 42.86 2.69
4459 4488 1.438651 CGTGCCTCGATTCCTTTCAA 58.561 50.000 0.00 0.00 42.86 2.69
4460 4489 1.804151 CGTGCCTCGATTCCTTTCAAA 59.196 47.619 0.00 0.00 42.86 2.69
4461 4490 2.225491 CGTGCCTCGATTCCTTTCAAAA 59.775 45.455 0.00 0.00 42.86 2.44
4462 4491 3.304391 CGTGCCTCGATTCCTTTCAAAAA 60.304 43.478 0.00 0.00 42.86 1.94
4463 4492 4.229876 GTGCCTCGATTCCTTTCAAAAAG 58.770 43.478 0.00 0.00 0.00 2.27
4464 4493 4.023193 GTGCCTCGATTCCTTTCAAAAAGA 60.023 41.667 1.06 0.00 0.00 2.52
4465 4494 4.766891 TGCCTCGATTCCTTTCAAAAAGAT 59.233 37.500 1.06 0.00 0.00 2.40
4466 4495 5.098211 GCCTCGATTCCTTTCAAAAAGATG 58.902 41.667 1.06 0.00 0.00 2.90
4467 4496 5.106157 GCCTCGATTCCTTTCAAAAAGATGA 60.106 40.000 1.06 0.00 0.00 2.92
4468 4497 6.570378 GCCTCGATTCCTTTCAAAAAGATGAA 60.570 38.462 1.06 0.00 37.53 2.57
4469 4498 7.025963 CCTCGATTCCTTTCAAAAAGATGAAG 58.974 38.462 1.06 0.00 40.21 3.02
4470 4499 6.913170 TCGATTCCTTTCAAAAAGATGAAGG 58.087 36.000 1.06 0.00 40.21 3.46
4476 4505 6.639632 CTTTCAAAAAGATGAAGGGACAGA 57.360 37.500 0.00 0.00 40.21 3.41
4477 4506 6.639632 TTTCAAAAAGATGAAGGGACAGAG 57.360 37.500 0.00 0.00 40.21 3.35
4478 4507 4.655963 TCAAAAAGATGAAGGGACAGAGG 58.344 43.478 0.00 0.00 0.00 3.69
4479 4508 4.104738 TCAAAAAGATGAAGGGACAGAGGT 59.895 41.667 0.00 0.00 0.00 3.85
4480 4509 3.710209 AAAGATGAAGGGACAGAGGTG 57.290 47.619 0.00 0.00 0.00 4.00
4481 4510 2.630889 AGATGAAGGGACAGAGGTGA 57.369 50.000 0.00 0.00 0.00 4.02
4482 4511 2.183679 AGATGAAGGGACAGAGGTGAC 58.816 52.381 0.00 0.00 0.00 3.67
4484 4513 2.992847 TGAAGGGACAGAGGTGACTA 57.007 50.000 0.00 0.00 44.43 2.59
4485 4514 3.254093 TGAAGGGACAGAGGTGACTAA 57.746 47.619 0.00 0.00 44.43 2.24
4486 4515 3.791320 TGAAGGGACAGAGGTGACTAAT 58.209 45.455 0.00 0.00 44.43 1.73
4487 4516 4.168101 TGAAGGGACAGAGGTGACTAATT 58.832 43.478 0.00 0.00 44.43 1.40
4488 4517 4.223032 TGAAGGGACAGAGGTGACTAATTC 59.777 45.833 0.00 0.00 44.43 2.17
4489 4518 3.108376 AGGGACAGAGGTGACTAATTCC 58.892 50.000 0.00 0.00 44.43 3.01
4490 4519 2.170817 GGGACAGAGGTGACTAATTCCC 59.829 54.545 0.00 0.00 44.43 3.97
4491 4520 3.108376 GGACAGAGGTGACTAATTCCCT 58.892 50.000 0.00 0.00 44.43 4.20
4492 4521 4.287552 GGACAGAGGTGACTAATTCCCTA 58.712 47.826 0.00 0.00 44.43 3.53
4493 4522 4.902448 GGACAGAGGTGACTAATTCCCTAT 59.098 45.833 0.00 0.00 44.43 2.57
4494 4523 5.011227 GGACAGAGGTGACTAATTCCCTATC 59.989 48.000 0.00 0.00 44.43 2.08
4495 4524 5.782925 ACAGAGGTGACTAATTCCCTATCT 58.217 41.667 0.00 0.00 44.43 1.98
4496 4525 5.836358 ACAGAGGTGACTAATTCCCTATCTC 59.164 44.000 0.00 0.00 44.43 2.75
4497 4526 5.835819 CAGAGGTGACTAATTCCCTATCTCA 59.164 44.000 0.00 0.00 44.43 3.27
4498 4527 6.496565 CAGAGGTGACTAATTCCCTATCTCAT 59.503 42.308 0.00 0.00 44.43 2.90
4499 4528 7.016072 CAGAGGTGACTAATTCCCTATCTCATT 59.984 40.741 0.00 0.00 44.43 2.57
4500 4529 7.570607 AGAGGTGACTAATTCCCTATCTCATTT 59.429 37.037 0.00 0.00 44.43 2.32
4501 4530 7.512992 AGGTGACTAATTCCCTATCTCATTTG 58.487 38.462 0.00 0.00 40.61 2.32
4502 4531 6.712547 GGTGACTAATTCCCTATCTCATTTGG 59.287 42.308 0.00 0.00 0.00 3.28
4503 4532 6.712547 GTGACTAATTCCCTATCTCATTTGGG 59.287 42.308 0.00 0.00 40.95 4.12
4504 4533 6.183361 TGACTAATTCCCTATCTCATTTGGGG 60.183 42.308 0.00 0.00 40.05 4.96
4505 4534 3.532641 ATTCCCTATCTCATTTGGGGC 57.467 47.619 0.00 0.00 40.05 5.80
4506 4535 0.764890 TCCCTATCTCATTTGGGGCG 59.235 55.000 0.00 0.00 40.05 6.13
4507 4536 0.250901 CCCTATCTCATTTGGGGCGG 60.251 60.000 0.00 0.00 36.15 6.13
4508 4537 0.764890 CCTATCTCATTTGGGGCGGA 59.235 55.000 0.00 0.00 0.00 5.54
4509 4538 1.142870 CCTATCTCATTTGGGGCGGAA 59.857 52.381 0.00 0.00 0.00 4.30
4510 4539 2.422803 CCTATCTCATTTGGGGCGGAAA 60.423 50.000 0.00 0.00 0.00 3.13
4511 4540 2.230130 ATCTCATTTGGGGCGGAAAA 57.770 45.000 0.00 0.00 0.00 2.29
4512 4541 1.253100 TCTCATTTGGGGCGGAAAAC 58.747 50.000 0.00 0.00 0.00 2.43
4526 4555 3.554670 GGAAAACGAATCGACATCTCG 57.445 47.619 10.55 0.00 41.65 4.04
4541 4570 4.327982 CATCTCGATGTGATACAACCCT 57.672 45.455 0.00 0.00 34.23 4.34
4542 4571 4.697514 CATCTCGATGTGATACAACCCTT 58.302 43.478 0.00 0.00 34.23 3.95
4543 4572 4.819105 TCTCGATGTGATACAACCCTTT 57.181 40.909 0.00 0.00 0.00 3.11
4544 4573 4.755411 TCTCGATGTGATACAACCCTTTC 58.245 43.478 0.00 0.00 0.00 2.62
4545 4574 3.869065 TCGATGTGATACAACCCTTTCC 58.131 45.455 0.00 0.00 0.00 3.13
4546 4575 3.262151 TCGATGTGATACAACCCTTTCCA 59.738 43.478 0.00 0.00 0.00 3.53
4547 4576 4.080582 TCGATGTGATACAACCCTTTCCAT 60.081 41.667 0.00 0.00 0.00 3.41
4548 4577 4.640201 CGATGTGATACAACCCTTTCCATT 59.360 41.667 0.00 0.00 0.00 3.16
4549 4578 5.125417 CGATGTGATACAACCCTTTCCATTT 59.875 40.000 0.00 0.00 0.00 2.32
4550 4579 6.350110 CGATGTGATACAACCCTTTCCATTTT 60.350 38.462 0.00 0.00 0.00 1.82
4551 4580 6.339587 TGTGATACAACCCTTTCCATTTTC 57.660 37.500 0.00 0.00 0.00 2.29
4552 4581 5.048364 TGTGATACAACCCTTTCCATTTTCG 60.048 40.000 0.00 0.00 0.00 3.46
4553 4582 5.048294 GTGATACAACCCTTTCCATTTTCGT 60.048 40.000 0.00 0.00 0.00 3.85
4554 4583 5.536916 TGATACAACCCTTTCCATTTTCGTT 59.463 36.000 0.00 0.00 0.00 3.85
4555 4584 4.053469 ACAACCCTTTCCATTTTCGTTG 57.947 40.909 0.00 0.00 36.17 4.10
4556 4585 3.181470 ACAACCCTTTCCATTTTCGTTGG 60.181 43.478 0.00 0.00 34.78 3.77
4557 4586 1.967779 ACCCTTTCCATTTTCGTTGGG 59.032 47.619 0.00 0.00 39.26 4.12
4558 4587 2.243810 CCCTTTCCATTTTCGTTGGGA 58.756 47.619 0.00 0.00 35.64 4.37
4559 4588 2.630580 CCCTTTCCATTTTCGTTGGGAA 59.369 45.455 0.00 0.00 37.63 3.97
4560 4589 3.070302 CCCTTTCCATTTTCGTTGGGAAA 59.930 43.478 0.00 0.00 44.69 3.13
4563 4592 5.599999 TTTCCATTTTCGTTGGGAAAGAA 57.400 34.783 0.00 0.00 44.95 2.52
4564 4593 4.577834 TCCATTTTCGTTGGGAAAGAAC 57.422 40.909 0.00 0.00 44.95 3.01
4565 4594 3.003897 TCCATTTTCGTTGGGAAAGAACG 59.996 43.478 0.00 0.00 44.95 3.95
4566 4595 3.305110 CATTTTCGTTGGGAAAGAACGG 58.695 45.455 0.00 0.00 44.95 4.44
4567 4596 2.041251 TTTCGTTGGGAAAGAACGGT 57.959 45.000 0.00 0.00 44.96 4.83
4568 4597 1.301423 TTCGTTGGGAAAGAACGGTG 58.699 50.000 0.00 0.00 44.96 4.94
4569 4598 0.464870 TCGTTGGGAAAGAACGGTGA 59.535 50.000 0.00 0.00 44.96 4.02
4570 4599 1.134461 TCGTTGGGAAAGAACGGTGAA 60.134 47.619 0.00 0.00 44.96 3.18
4571 4600 1.263217 CGTTGGGAAAGAACGGTGAAG 59.737 52.381 0.00 0.00 41.95 3.02
4572 4601 2.294979 GTTGGGAAAGAACGGTGAAGT 58.705 47.619 0.00 0.00 0.00 3.01
4573 4602 2.249844 TGGGAAAGAACGGTGAAGTC 57.750 50.000 0.00 0.00 0.00 3.01
4574 4603 1.202722 TGGGAAAGAACGGTGAAGTCC 60.203 52.381 0.00 0.00 0.00 3.85
4575 4604 1.202722 GGGAAAGAACGGTGAAGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
4576 4605 2.552373 GGGAAAGAACGGTGAAGTCCAT 60.552 50.000 0.00 0.00 0.00 3.41
4577 4606 2.742589 GGAAAGAACGGTGAAGTCCATC 59.257 50.000 0.00 0.00 0.00 3.51
4578 4607 2.474410 AAGAACGGTGAAGTCCATCC 57.526 50.000 0.00 0.00 0.00 3.51
4579 4608 0.246635 AGAACGGTGAAGTCCATCCG 59.753 55.000 0.00 0.00 41.73 4.18
4580 4609 0.245539 GAACGGTGAAGTCCATCCGA 59.754 55.000 9.37 0.00 39.87 4.55
4581 4610 0.682852 AACGGTGAAGTCCATCCGAA 59.317 50.000 9.37 0.00 39.87 4.30
4582 4611 0.037605 ACGGTGAAGTCCATCCGAAC 60.038 55.000 9.37 0.00 39.87 3.95
4583 4612 0.739813 CGGTGAAGTCCATCCGAACC 60.740 60.000 0.00 0.00 39.87 3.62
4584 4613 0.392595 GGTGAAGTCCATCCGAACCC 60.393 60.000 0.00 0.00 0.00 4.11
4585 4614 0.613777 GTGAAGTCCATCCGAACCCT 59.386 55.000 0.00 0.00 0.00 4.34
4586 4615 0.902531 TGAAGTCCATCCGAACCCTC 59.097 55.000 0.00 0.00 0.00 4.30
4587 4616 0.178301 GAAGTCCATCCGAACCCTCC 59.822 60.000 0.00 0.00 0.00 4.30
4588 4617 0.546747 AAGTCCATCCGAACCCTCCA 60.547 55.000 0.00 0.00 0.00 3.86
4589 4618 0.546747 AGTCCATCCGAACCCTCCAA 60.547 55.000 0.00 0.00 0.00 3.53
4590 4619 0.546598 GTCCATCCGAACCCTCCAAT 59.453 55.000 0.00 0.00 0.00 3.16
4591 4620 0.546122 TCCATCCGAACCCTCCAATG 59.454 55.000 0.00 0.00 0.00 2.82
4592 4621 0.546122 CCATCCGAACCCTCCAATGA 59.454 55.000 0.00 0.00 0.00 2.57
4593 4622 1.064758 CCATCCGAACCCTCCAATGAA 60.065 52.381 0.00 0.00 0.00 2.57
4594 4623 2.292267 CATCCGAACCCTCCAATGAAG 58.708 52.381 0.00 0.00 0.00 3.02
4595 4624 1.651737 TCCGAACCCTCCAATGAAGA 58.348 50.000 0.00 0.00 0.00 2.87
4596 4625 1.982226 TCCGAACCCTCCAATGAAGAA 59.018 47.619 0.00 0.00 0.00 2.52
4597 4626 2.373836 TCCGAACCCTCCAATGAAGAAA 59.626 45.455 0.00 0.00 0.00 2.52
4598 4627 3.010138 TCCGAACCCTCCAATGAAGAAAT 59.990 43.478 0.00 0.00 0.00 2.17
4599 4628 4.226394 TCCGAACCCTCCAATGAAGAAATA 59.774 41.667 0.00 0.00 0.00 1.40
4600 4629 4.947388 CCGAACCCTCCAATGAAGAAATAA 59.053 41.667 0.00 0.00 0.00 1.40
4601 4630 5.066505 CCGAACCCTCCAATGAAGAAATAAG 59.933 44.000 0.00 0.00 0.00 1.73
4602 4631 5.880332 CGAACCCTCCAATGAAGAAATAAGA 59.120 40.000 0.00 0.00 0.00 2.10
4603 4632 6.037610 CGAACCCTCCAATGAAGAAATAAGAG 59.962 42.308 0.00 0.00 0.00 2.85
4604 4633 5.760131 ACCCTCCAATGAAGAAATAAGAGG 58.240 41.667 0.00 0.00 39.50 3.69
4605 4634 5.492524 ACCCTCCAATGAAGAAATAAGAGGA 59.507 40.000 4.32 0.00 41.82 3.71
4606 4635 6.060788 CCCTCCAATGAAGAAATAAGAGGAG 58.939 44.000 4.32 0.00 41.82 3.69
4607 4636 6.126652 CCCTCCAATGAAGAAATAAGAGGAGA 60.127 42.308 0.00 0.00 41.82 3.71
4608 4637 6.991531 CCTCCAATGAAGAAATAAGAGGAGAG 59.008 42.308 0.00 0.00 41.82 3.20
4609 4638 6.352516 TCCAATGAAGAAATAAGAGGAGAGC 58.647 40.000 0.00 0.00 0.00 4.09
4610 4639 6.070021 TCCAATGAAGAAATAAGAGGAGAGCA 60.070 38.462 0.00 0.00 0.00 4.26
4611 4640 6.600822 CCAATGAAGAAATAAGAGGAGAGCAA 59.399 38.462 0.00 0.00 0.00 3.91
4612 4641 7.121759 CCAATGAAGAAATAAGAGGAGAGCAAA 59.878 37.037 0.00 0.00 0.00 3.68
4613 4642 7.862512 ATGAAGAAATAAGAGGAGAGCAAAG 57.137 36.000 0.00 0.00 0.00 2.77
4614 4643 5.645497 TGAAGAAATAAGAGGAGAGCAAAGC 59.355 40.000 0.00 0.00 0.00 3.51
4615 4644 4.522114 AGAAATAAGAGGAGAGCAAAGCC 58.478 43.478 0.00 0.00 0.00 4.35
4616 4645 3.289407 AATAAGAGGAGAGCAAAGCCC 57.711 47.619 0.00 0.00 0.00 5.19
4617 4646 1.656587 TAAGAGGAGAGCAAAGCCCA 58.343 50.000 0.00 0.00 0.00 5.36
4618 4647 0.773644 AAGAGGAGAGCAAAGCCCAA 59.226 50.000 0.00 0.00 0.00 4.12
4619 4648 0.998145 AGAGGAGAGCAAAGCCCAAT 59.002 50.000 0.00 0.00 0.00 3.16
4620 4649 1.101331 GAGGAGAGCAAAGCCCAATG 58.899 55.000 0.00 0.00 0.00 2.82
4621 4650 0.324091 AGGAGAGCAAAGCCCAATGG 60.324 55.000 0.00 0.00 0.00 3.16
4650 4679 3.136123 CATGCGGAAGGGGCACAG 61.136 66.667 0.00 0.00 44.23 3.66
4651 4680 3.329889 ATGCGGAAGGGGCACAGA 61.330 61.111 0.00 0.00 44.23 3.41
4652 4681 3.335356 ATGCGGAAGGGGCACAGAG 62.335 63.158 0.00 0.00 44.23 3.35
4653 4682 3.706373 GCGGAAGGGGCACAGAGA 61.706 66.667 0.00 0.00 0.00 3.10
4654 4683 3.068881 CGGAAGGGGCACAGAGAA 58.931 61.111 0.00 0.00 0.00 2.87
4655 4684 1.374947 CGGAAGGGGCACAGAGAAA 59.625 57.895 0.00 0.00 0.00 2.52
4656 4685 0.035056 CGGAAGGGGCACAGAGAAAT 60.035 55.000 0.00 0.00 0.00 2.17
4657 4686 1.209504 CGGAAGGGGCACAGAGAAATA 59.790 52.381 0.00 0.00 0.00 1.40
4658 4687 2.355716 CGGAAGGGGCACAGAGAAATAA 60.356 50.000 0.00 0.00 0.00 1.40
4659 4688 3.697166 GGAAGGGGCACAGAGAAATAAA 58.303 45.455 0.00 0.00 0.00 1.40
4660 4689 3.696548 GGAAGGGGCACAGAGAAATAAAG 59.303 47.826 0.00 0.00 0.00 1.85
4661 4690 4.567747 GGAAGGGGCACAGAGAAATAAAGA 60.568 45.833 0.00 0.00 0.00 2.52
4662 4691 4.657814 AGGGGCACAGAGAAATAAAGAA 57.342 40.909 0.00 0.00 0.00 2.52
4663 4692 4.593956 AGGGGCACAGAGAAATAAAGAAG 58.406 43.478 0.00 0.00 0.00 2.85
4664 4693 4.043435 AGGGGCACAGAGAAATAAAGAAGT 59.957 41.667 0.00 0.00 0.00 3.01
4665 4694 4.156739 GGGGCACAGAGAAATAAAGAAGTG 59.843 45.833 0.00 0.00 0.00 3.16
4666 4695 4.762251 GGGCACAGAGAAATAAAGAAGTGT 59.238 41.667 0.00 0.00 0.00 3.55
4667 4696 5.335191 GGGCACAGAGAAATAAAGAAGTGTG 60.335 44.000 0.00 0.00 37.66 3.82
4668 4697 5.335191 GGCACAGAGAAATAAAGAAGTGTGG 60.335 44.000 0.00 0.00 35.63 4.17
4669 4698 5.335191 GCACAGAGAAATAAAGAAGTGTGGG 60.335 44.000 0.00 0.00 35.63 4.61
4670 4699 5.182001 CACAGAGAAATAAAGAAGTGTGGGG 59.818 44.000 0.00 0.00 32.26 4.96
4671 4700 4.702131 CAGAGAAATAAAGAAGTGTGGGGG 59.298 45.833 0.00 0.00 0.00 5.40
4672 4701 4.601857 AGAGAAATAAAGAAGTGTGGGGGA 59.398 41.667 0.00 0.00 0.00 4.81
4673 4702 4.923415 AGAAATAAAGAAGTGTGGGGGAG 58.077 43.478 0.00 0.00 0.00 4.30
4674 4703 4.601857 AGAAATAAAGAAGTGTGGGGGAGA 59.398 41.667 0.00 0.00 0.00 3.71
4675 4704 5.074515 AGAAATAAAGAAGTGTGGGGGAGAA 59.925 40.000 0.00 0.00 0.00 2.87
4676 4705 2.959465 AAAGAAGTGTGGGGGAGAAG 57.041 50.000 0.00 0.00 0.00 2.85
4677 4706 0.402121 AAGAAGTGTGGGGGAGAAGC 59.598 55.000 0.00 0.00 0.00 3.86
4678 4707 0.768221 AGAAGTGTGGGGGAGAAGCA 60.768 55.000 0.00 0.00 0.00 3.91
4679 4708 0.322008 GAAGTGTGGGGGAGAAGCAG 60.322 60.000 0.00 0.00 0.00 4.24
4680 4709 2.360475 GTGTGGGGGAGAAGCAGC 60.360 66.667 0.00 0.00 0.00 5.25
4681 4710 3.650950 TGTGGGGGAGAAGCAGCC 61.651 66.667 0.00 0.00 0.00 4.85
4682 4711 4.785453 GTGGGGGAGAAGCAGCCG 62.785 72.222 0.00 0.00 0.00 5.52
4684 4713 4.168291 GGGGGAGAAGCAGCCGAG 62.168 72.222 0.00 0.00 0.00 4.63
4685 4714 3.394836 GGGGAGAAGCAGCCGAGT 61.395 66.667 0.00 0.00 0.00 4.18
4686 4715 2.665603 GGGAGAAGCAGCCGAGTT 59.334 61.111 0.00 0.00 0.00 3.01
4687 4716 1.448717 GGGAGAAGCAGCCGAGTTC 60.449 63.158 0.00 0.00 0.00 3.01
4688 4717 1.293498 GGAGAAGCAGCCGAGTTCA 59.707 57.895 0.00 0.00 0.00 3.18
4689 4718 0.107945 GGAGAAGCAGCCGAGTTCAT 60.108 55.000 0.00 0.00 0.00 2.57
4690 4719 1.677217 GGAGAAGCAGCCGAGTTCATT 60.677 52.381 0.00 0.00 0.00 2.57
4691 4720 1.663135 GAGAAGCAGCCGAGTTCATTC 59.337 52.381 0.00 0.00 0.00 2.67
4692 4721 0.729690 GAAGCAGCCGAGTTCATTCC 59.270 55.000 0.00 0.00 0.00 3.01
4693 4722 0.678048 AAGCAGCCGAGTTCATTCCC 60.678 55.000 0.00 0.00 0.00 3.97
4694 4723 1.078143 GCAGCCGAGTTCATTCCCT 60.078 57.895 0.00 0.00 0.00 4.20
4695 4724 0.678048 GCAGCCGAGTTCATTCCCTT 60.678 55.000 0.00 0.00 0.00 3.95
4696 4725 1.826385 CAGCCGAGTTCATTCCCTTT 58.174 50.000 0.00 0.00 0.00 3.11
4697 4726 1.470098 CAGCCGAGTTCATTCCCTTTG 59.530 52.381 0.00 0.00 0.00 2.77
4698 4727 0.171231 GCCGAGTTCATTCCCTTTGC 59.829 55.000 0.00 0.00 0.00 3.68
4699 4728 1.826385 CCGAGTTCATTCCCTTTGCT 58.174 50.000 0.00 0.00 0.00 3.91
4700 4729 2.162681 CCGAGTTCATTCCCTTTGCTT 58.837 47.619 0.00 0.00 0.00 3.91
4701 4730 2.162408 CCGAGTTCATTCCCTTTGCTTC 59.838 50.000 0.00 0.00 0.00 3.86
4702 4731 2.162408 CGAGTTCATTCCCTTTGCTTCC 59.838 50.000 0.00 0.00 0.00 3.46
4703 4732 3.425659 GAGTTCATTCCCTTTGCTTCCT 58.574 45.455 0.00 0.00 0.00 3.36
4704 4733 3.160269 AGTTCATTCCCTTTGCTTCCTG 58.840 45.455 0.00 0.00 0.00 3.86
4705 4734 2.220653 TCATTCCCTTTGCTTCCTGG 57.779 50.000 0.00 0.00 0.00 4.45
4706 4735 1.188863 CATTCCCTTTGCTTCCTGGG 58.811 55.000 0.00 0.00 40.95 4.45
4707 4736 0.615827 ATTCCCTTTGCTTCCTGGGC 60.616 55.000 0.00 0.00 39.49 5.36
4708 4737 2.681421 CCCTTTGCTTCCTGGGCC 60.681 66.667 0.00 0.00 32.49 5.80
4709 4738 2.681421 CCTTTGCTTCCTGGGCCC 60.681 66.667 17.59 17.59 0.00 5.80
4710 4739 2.118076 CTTTGCTTCCTGGGCCCA 59.882 61.111 26.67 26.67 0.00 5.36
4711 4740 1.533753 CTTTGCTTCCTGGGCCCAA 60.534 57.895 28.29 9.54 0.00 4.12
4712 4741 1.074926 TTTGCTTCCTGGGCCCAAA 60.075 52.632 28.29 17.69 0.00 3.28
4713 4742 1.120795 TTTGCTTCCTGGGCCCAAAG 61.121 55.000 28.29 27.00 0.00 2.77
4714 4743 3.385384 GCTTCCTGGGCCCAAAGC 61.385 66.667 34.59 34.59 42.60 3.51
4715 4744 2.118076 CTTCCTGGGCCCAAAGCA 59.882 61.111 28.29 9.93 46.50 3.91
4716 4745 1.980772 CTTCCTGGGCCCAAAGCAG 60.981 63.158 28.29 16.12 46.50 4.24
4717 4746 2.720144 CTTCCTGGGCCCAAAGCAGT 62.720 60.000 28.29 0.00 46.50 4.40
4718 4747 2.993264 CCTGGGCCCAAAGCAGTG 60.993 66.667 28.29 12.30 46.50 3.66
4719 4748 2.203538 CTGGGCCCAAAGCAGTGT 60.204 61.111 28.29 0.00 46.50 3.55
4720 4749 1.833934 CTGGGCCCAAAGCAGTGTT 60.834 57.895 28.29 0.00 46.50 3.32
4721 4750 1.382420 TGGGCCCAAAGCAGTGTTT 60.382 52.632 26.33 0.00 46.50 2.83
4722 4751 0.980231 TGGGCCCAAAGCAGTGTTTT 60.980 50.000 26.33 0.00 46.50 2.43
4723 4752 0.532640 GGGCCCAAAGCAGTGTTTTG 60.533 55.000 19.95 21.66 46.50 2.44
4724 4753 0.177836 GGCCCAAAGCAGTGTTTTGT 59.822 50.000 25.00 0.00 46.50 2.83
4725 4754 1.406751 GGCCCAAAGCAGTGTTTTGTT 60.407 47.619 25.00 0.00 46.50 2.83
4726 4755 2.355197 GCCCAAAGCAGTGTTTTGTTT 58.645 42.857 25.00 2.23 42.97 2.83
4727 4756 2.351418 GCCCAAAGCAGTGTTTTGTTTC 59.649 45.455 25.00 13.20 42.97 2.78
4728 4757 2.935849 CCCAAAGCAGTGTTTTGTTTCC 59.064 45.455 25.00 0.00 34.51 3.13
4729 4758 3.369366 CCCAAAGCAGTGTTTTGTTTCCT 60.369 43.478 25.00 0.00 34.51 3.36
4730 4759 3.618150 CCAAAGCAGTGTTTTGTTTCCTG 59.382 43.478 25.00 9.76 34.51 3.86
4731 4760 3.525268 AAGCAGTGTTTTGTTTCCTGG 57.475 42.857 0.00 0.00 0.00 4.45
4732 4761 1.136891 AGCAGTGTTTTGTTTCCTGGC 59.863 47.619 0.00 0.00 0.00 4.85
4733 4762 1.806247 GCAGTGTTTTGTTTCCTGGCC 60.806 52.381 0.00 0.00 0.00 5.36
4734 4763 1.480137 CAGTGTTTTGTTTCCTGGCCA 59.520 47.619 4.71 4.71 0.00 5.36
4735 4764 2.093764 CAGTGTTTTGTTTCCTGGCCAA 60.094 45.455 7.01 0.00 0.00 4.52
4736 4765 2.569404 AGTGTTTTGTTTCCTGGCCAAA 59.431 40.909 7.01 0.00 0.00 3.28
4737 4766 3.199727 AGTGTTTTGTTTCCTGGCCAAAT 59.800 39.130 7.01 0.00 0.00 2.32
4738 4767 3.559655 GTGTTTTGTTTCCTGGCCAAATC 59.440 43.478 7.01 0.00 0.00 2.17
4739 4768 3.198635 TGTTTTGTTTCCTGGCCAAATCA 59.801 39.130 7.01 1.46 0.00 2.57
4740 4769 4.195416 GTTTTGTTTCCTGGCCAAATCAA 58.805 39.130 7.01 8.20 0.00 2.57
4741 4770 3.749665 TTGTTTCCTGGCCAAATCAAG 57.250 42.857 7.01 0.00 0.00 3.02
4742 4771 1.969923 TGTTTCCTGGCCAAATCAAGG 59.030 47.619 7.01 2.92 0.00 3.61
4743 4772 2.247358 GTTTCCTGGCCAAATCAAGGA 58.753 47.619 7.01 5.87 0.00 3.36
4744 4773 2.833943 GTTTCCTGGCCAAATCAAGGAT 59.166 45.455 7.01 0.00 0.00 3.24
4745 4774 2.925966 TCCTGGCCAAATCAAGGATT 57.074 45.000 7.01 0.00 33.25 3.01
4746 4775 3.188880 TCCTGGCCAAATCAAGGATTT 57.811 42.857 7.01 0.00 42.14 2.17
4754 4783 2.925966 AATCAAGGATTTGGGGCTGA 57.074 45.000 0.00 0.00 34.97 4.26
4755 4784 3.409804 AATCAAGGATTTGGGGCTGAT 57.590 42.857 0.00 0.00 34.97 2.90
4756 4785 2.925966 TCAAGGATTTGGGGCTGATT 57.074 45.000 0.00 0.00 34.97 2.57
4757 4786 2.459644 TCAAGGATTTGGGGCTGATTG 58.540 47.619 0.00 0.00 34.97 2.67
4758 4787 1.134610 CAAGGATTTGGGGCTGATTGC 60.135 52.381 0.00 0.00 41.94 3.56
4759 4788 0.041535 AGGATTTGGGGCTGATTGCA 59.958 50.000 0.00 0.00 45.15 4.08
4760 4789 0.903942 GGATTTGGGGCTGATTGCAA 59.096 50.000 0.00 0.00 45.15 4.08
4761 4790 1.278699 GGATTTGGGGCTGATTGCAAA 59.721 47.619 1.71 0.00 45.15 3.68
4762 4791 2.290197 GGATTTGGGGCTGATTGCAAAA 60.290 45.455 1.71 0.00 45.15 2.44
4763 4792 2.547299 TTTGGGGCTGATTGCAAAAG 57.453 45.000 1.71 5.63 45.15 2.27
4764 4793 1.714541 TTGGGGCTGATTGCAAAAGA 58.285 45.000 14.83 0.00 45.15 2.52
4765 4794 1.941377 TGGGGCTGATTGCAAAAGAT 58.059 45.000 14.83 0.00 45.15 2.40
4766 4795 3.098774 TGGGGCTGATTGCAAAAGATA 57.901 42.857 14.83 0.00 45.15 1.98
4767 4796 3.645434 TGGGGCTGATTGCAAAAGATAT 58.355 40.909 14.83 0.00 45.15 1.63
4768 4797 3.638160 TGGGGCTGATTGCAAAAGATATC 59.362 43.478 14.83 2.97 45.15 1.63
4769 4798 3.893813 GGGGCTGATTGCAAAAGATATCT 59.106 43.478 14.83 0.00 45.15 1.98
4770 4799 4.261909 GGGGCTGATTGCAAAAGATATCTG 60.262 45.833 5.86 7.20 45.15 2.90
4771 4800 4.581824 GGGCTGATTGCAAAAGATATCTGA 59.418 41.667 5.86 0.00 45.15 3.27
4772 4801 5.068198 GGGCTGATTGCAAAAGATATCTGAA 59.932 40.000 5.86 0.00 45.15 3.02
4773 4802 6.239232 GGGCTGATTGCAAAAGATATCTGAAT 60.239 38.462 5.86 0.56 45.15 2.57
4774 4803 7.040201 GGGCTGATTGCAAAAGATATCTGAATA 60.040 37.037 5.86 0.00 45.15 1.75
4775 4804 8.021973 GGCTGATTGCAAAAGATATCTGAATAG 58.978 37.037 5.86 0.00 45.15 1.73
4776 4805 8.781196 GCTGATTGCAAAAGATATCTGAATAGA 58.219 33.333 5.86 0.00 42.31 1.98
4792 4821 8.962912 TCTGAATAGAAAGATAGATCCATCCA 57.037 34.615 0.00 0.00 0.00 3.41
4793 4822 9.558133 TCTGAATAGAAAGATAGATCCATCCAT 57.442 33.333 0.00 0.00 0.00 3.41
4794 4823 9.820725 CTGAATAGAAAGATAGATCCATCCATC 57.179 37.037 0.00 0.00 0.00 3.51
4795 4824 9.558133 TGAATAGAAAGATAGATCCATCCATCT 57.442 33.333 9.92 9.92 36.95 2.90
4806 4835 9.772605 ATAGATCCATCCATCTATCCATCTATC 57.227 37.037 0.00 0.00 40.65 2.08
4807 4836 7.839293 AGATCCATCCATCTATCCATCTATCT 58.161 38.462 0.00 0.00 30.84 1.98
4808 4837 8.968655 AGATCCATCCATCTATCCATCTATCTA 58.031 37.037 0.00 0.00 30.84 1.98
4809 4838 9.599056 GATCCATCCATCTATCCATCTATCTAA 57.401 37.037 0.00 0.00 0.00 2.10
4810 4839 9.964408 ATCCATCCATCTATCCATCTATCTAAA 57.036 33.333 0.00 0.00 0.00 1.85
4811 4840 9.788815 TCCATCCATCTATCCATCTATCTAAAA 57.211 33.333 0.00 0.00 0.00 1.52
4840 4869 6.494893 TCGATTTCGATTTCATGAAACCTT 57.505 33.333 22.71 7.76 44.22 3.50
4841 4870 6.908825 TCGATTTCGATTTCATGAAACCTTT 58.091 32.000 22.71 7.38 44.22 3.11
4842 4871 6.801377 TCGATTTCGATTTCATGAAACCTTTG 59.199 34.615 22.71 11.42 44.22 2.77
4843 4872 6.801377 CGATTTCGATTTCATGAAACCTTTGA 59.199 34.615 22.71 13.46 43.02 2.69
4844 4873 7.485913 CGATTTCGATTTCATGAAACCTTTGAT 59.514 33.333 22.71 12.41 43.02 2.57
4845 4874 9.143631 GATTTCGATTTCATGAAACCTTTGATT 57.856 29.630 22.71 4.71 36.96 2.57
4846 4875 8.519492 TTTCGATTTCATGAAACCTTTGATTC 57.481 30.769 22.71 12.51 32.51 2.52
4847 4876 7.213216 TCGATTTCATGAAACCTTTGATTCA 57.787 32.000 22.71 0.00 39.66 2.57
4848 4877 7.656412 TCGATTTCATGAAACCTTTGATTCAA 58.344 30.769 22.71 0.00 38.88 2.69
4849 4878 8.140628 TCGATTTCATGAAACCTTTGATTCAAA 58.859 29.630 22.71 11.19 38.88 2.69
4850 4879 8.430063 CGATTTCATGAAACCTTTGATTCAAAG 58.570 33.333 25.66 25.66 39.92 2.77
4851 4880 9.480053 GATTTCATGAAACCTTTGATTCAAAGA 57.520 29.630 31.43 16.96 41.65 2.52
4852 4881 9.835389 ATTTCATGAAACCTTTGATTCAAAGAA 57.165 25.926 31.43 18.49 41.65 2.52
4862 4891 5.947228 TTGATTCAAAGAACTGTGCCTAG 57.053 39.130 0.00 0.00 0.00 3.02
4863 4892 3.753272 TGATTCAAAGAACTGTGCCTAGC 59.247 43.478 0.00 0.00 0.00 3.42
4864 4893 2.185004 TCAAAGAACTGTGCCTAGCC 57.815 50.000 0.00 0.00 0.00 3.93
4865 4894 1.168714 CAAAGAACTGTGCCTAGCCC 58.831 55.000 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
209 214 0.984230 AAGAAGGATGGCGGACTTCA 59.016 50.000 14.44 0.00 42.24 3.02
214 219 2.104792 CCTGAATAAGAAGGATGGCGGA 59.895 50.000 0.00 0.00 35.40 5.54
397 402 4.697756 TTCGCTCGGTTGGCCCTG 62.698 66.667 0.00 0.00 0.00 4.45
432 441 2.665519 CGAGAAAATTGCACTTCACGGG 60.666 50.000 11.77 0.00 33.70 5.28
482 491 6.614906 AGATGGGGAATGTCTATAGATCATCC 59.385 42.308 16.54 16.54 0.00 3.51
496 505 6.098838 TCTCGATTGGATATAGATGGGGAATG 59.901 42.308 0.00 0.00 0.00 2.67
652 661 1.559682 CAGGTTTTAGCCCTCCTGCTA 59.440 52.381 0.00 0.00 42.75 3.49
758 767 0.947244 CCTTGCTTGTTCTTGAGCGT 59.053 50.000 0.00 0.00 41.75 5.07
801 810 2.304761 TCCCCAGCAAGAAAACGTATCT 59.695 45.455 0.00 0.00 0.00 1.98
840 849 3.399644 CCACCTCTCCCTCCTCTCTAATA 59.600 52.174 0.00 0.00 0.00 0.98
844 853 0.553862 TCCACCTCTCCCTCCTCTCT 60.554 60.000 0.00 0.00 0.00 3.10
875 884 4.768968 CACAAAGACTCCAAAATCCATCCT 59.231 41.667 0.00 0.00 0.00 3.24
908 917 4.286967 CGACTCTCACCGCATACG 57.713 61.111 0.00 0.00 39.67 3.06
1033 1042 6.332630 CGGTCAAAATCTTGGCTAATTCATT 58.667 36.000 0.00 0.00 37.32 2.57
1036 1045 4.398044 TCCGGTCAAAATCTTGGCTAATTC 59.602 41.667 0.00 0.00 37.32 2.17
1069 1078 0.249238 CCACTAGATCGAGCACCAGC 60.249 60.000 2.38 0.00 42.56 4.85
1154 1163 2.037367 TCCGTCCTACAGCTGCCT 59.963 61.111 15.27 0.00 0.00 4.75
1158 1167 3.450115 GCCGTCCGTCCTACAGCT 61.450 66.667 0.00 0.00 0.00 4.24
1215 1224 1.729586 TAGGAGGATTGGCCGCTATT 58.270 50.000 0.00 0.00 43.43 1.73
1363 1372 3.128938 ACAACACTACAGAGCGAGTATCC 59.871 47.826 0.00 0.00 0.00 2.59
1365 1374 3.756963 TGACAACACTACAGAGCGAGTAT 59.243 43.478 0.00 0.00 0.00 2.12
1423 1432 3.028850 ACCGGGAGATAACTTCGATTCA 58.971 45.455 6.32 0.00 0.00 2.57
1439 1448 2.032071 GGTGGACAGTTGACCGGG 59.968 66.667 6.32 0.00 32.50 5.73
1497 1506 1.228063 CAGGAAGCACACCAGCAGT 60.228 57.895 0.00 0.00 36.85 4.40
1629 1638 0.975556 TCTCGCCAATACAGCCTCCA 60.976 55.000 0.00 0.00 0.00 3.86
1860 1870 0.390209 CAAAGCCGCCAAGGAAATGG 60.390 55.000 0.00 0.00 45.00 3.16
1879 1889 2.859165 TTCTGACTGAATCCACCCAC 57.141 50.000 0.00 0.00 0.00 4.61
2077 2087 7.324616 GCAAGCAGTTTTATAGTGACTTCTTTG 59.675 37.037 0.00 0.00 27.07 2.77
2133 2143 6.266168 AGCAAACATATTCATTTTCACCGA 57.734 33.333 0.00 0.00 0.00 4.69
2196 2206 9.284968 GATTGGGCTTCATAGCTACTTTAATTA 57.715 33.333 0.00 0.00 46.90 1.40
2200 2210 6.500589 AGATTGGGCTTCATAGCTACTTTA 57.499 37.500 0.00 0.00 46.90 1.85
2331 2346 8.088365 TGATAGAAAAGAAAGATCTTCGTCACA 58.912 33.333 8.78 2.66 45.19 3.58
2378 2393 7.603795 AGCAGATGGATCCTATCTCCTATAAT 58.396 38.462 18.41 0.00 32.75 1.28
2386 2401 4.293102 AGAGAGAGCAGATGGATCCTATCT 59.707 45.833 14.23 15.65 35.34 1.98
2566 2587 7.886405 ACCTAAAAACGAACTCTGATTACTC 57.114 36.000 0.00 0.00 0.00 2.59
2719 2740 2.961522 TAGCAAAGCGGAAAAAGACG 57.038 45.000 0.00 0.00 0.00 4.18
2903 2927 1.284111 TGGAGGGGTCCTAGCTACGA 61.284 60.000 0.00 0.00 31.76 3.43
2924 2948 3.758554 GGTGAACATAGGCTCAAACATGT 59.241 43.478 0.00 0.00 33.12 3.21
2970 2994 0.892755 TGAACGTCGGTAGGCATTCT 59.107 50.000 0.00 0.00 0.00 2.40
2979 3003 1.403780 GCACCTTATCTGAACGTCGGT 60.404 52.381 0.00 0.00 0.00 4.69
3067 3093 5.089970 ACAAATCGACATCTCAATCTCCA 57.910 39.130 0.00 0.00 0.00 3.86
3149 3175 7.103641 AGCCAGAATTCTTTATTAGAACGTCA 58.896 34.615 4.86 0.00 45.33 4.35
3170 3196 3.702048 CTTTCCCGGGTCGAGCCA 61.702 66.667 31.39 11.31 39.65 4.75
3194 3220 7.511028 ACATGGACCCCTTTCTTTATTTTGTTA 59.489 33.333 0.00 0.00 0.00 2.41
3200 3226 5.044105 AGCTACATGGACCCCTTTCTTTATT 60.044 40.000 0.00 0.00 0.00 1.40
3249 3275 7.068348 TCTCTCTTATGTAGTAAATGCCGAACT 59.932 37.037 0.00 0.00 0.00 3.01
3259 3285 9.475620 TGAAGTGGATTCTCTCTTATGTAGTAA 57.524 33.333 0.00 0.00 38.83 2.24
3267 3293 7.619698 TGGTTATCTGAAGTGGATTCTCTCTTA 59.380 37.037 0.00 0.00 38.83 2.10
3330 3356 9.247861 GGCTTGGATTATATATTCATTTGGTCT 57.752 33.333 6.89 0.00 0.00 3.85
3340 3366 6.440647 TCCACTCTCGGCTTGGATTATATATT 59.559 38.462 0.00 0.00 34.35 1.28
3380 3406 6.094325 ACGTGAAAGTTGTTTTCCATAAGACA 59.906 34.615 0.00 0.00 43.72 3.41
3385 3411 5.503498 CGAACGTGAAAGTTGTTTTCCATA 58.497 37.500 0.00 0.00 43.72 2.74
3552 3581 6.942576 GGTGCCCACATATATAGAGTCAAAAT 59.057 38.462 0.40 0.00 0.00 1.82
3610 3639 1.269257 GCGCAATAGAAAGGAATGCCC 60.269 52.381 0.30 0.00 33.55 5.36
3611 3640 1.269257 GGCGCAATAGAAAGGAATGCC 60.269 52.381 10.83 0.00 33.55 4.40
3749 3778 1.814772 CTTTCGTTTGGGCCATGGCA 61.815 55.000 36.56 16.33 44.11 4.92
3892 3921 4.541973 ACTATGGCGAATGCATCTATCA 57.458 40.909 0.00 0.00 45.35 2.15
3950 3979 1.195115 TGTCTAGAGCGCCCAAATCT 58.805 50.000 2.29 1.82 0.00 2.40
4067 4096 1.300697 ACAACCCAGAGCGACGAAC 60.301 57.895 0.00 0.00 0.00 3.95
4072 4101 3.636231 CCCCACAACCCAGAGCGA 61.636 66.667 0.00 0.00 0.00 4.93
4077 4106 0.112412 AAGTAAGCCCCACAACCCAG 59.888 55.000 0.00 0.00 0.00 4.45
4104 4133 3.263261 CGCTAGTCACTACTCTCACTGA 58.737 50.000 0.00 0.00 37.15 3.41
4110 4139 5.927819 ACCTATAACGCTAGTCACTACTCT 58.072 41.667 0.00 0.00 37.15 3.24
4235 4264 3.599343 TGTCTTTCGTAGCATGCATTCT 58.401 40.909 21.98 3.83 0.00 2.40
4261 4290 3.181500 CGACGGTTGATGTATCAGACTCA 60.181 47.826 0.00 0.00 38.19 3.41
4385 4414 2.290916 AGCACCTCAGTATACGATCGTG 59.709 50.000 30.23 13.47 0.00 4.35
4386 4415 2.548904 GAGCACCTCAGTATACGATCGT 59.451 50.000 25.94 25.94 0.00 3.73
4387 4416 2.095668 GGAGCACCTCAGTATACGATCG 60.096 54.545 14.88 14.88 31.08 3.69
4388 4417 2.229302 GGGAGCACCTCAGTATACGATC 59.771 54.545 0.00 0.00 35.85 3.69
4389 4418 2.240279 GGGAGCACCTCAGTATACGAT 58.760 52.381 0.00 0.00 35.85 3.73
4390 4419 1.688772 GGGAGCACCTCAGTATACGA 58.311 55.000 0.00 0.00 35.85 3.43
4391 4420 0.674534 GGGGAGCACCTCAGTATACG 59.325 60.000 0.00 0.00 40.03 3.06
4392 4421 0.674534 CGGGGAGCACCTCAGTATAC 59.325 60.000 0.00 0.00 40.03 1.47
4393 4422 0.260816 ACGGGGAGCACCTCAGTATA 59.739 55.000 0.00 0.00 40.03 1.47
4394 4423 1.001760 ACGGGGAGCACCTCAGTAT 59.998 57.895 0.00 0.00 40.03 2.12
4395 4424 1.681327 GACGGGGAGCACCTCAGTA 60.681 63.158 0.00 0.00 40.03 2.74
4396 4425 2.997897 GACGGGGAGCACCTCAGT 60.998 66.667 0.00 0.00 40.03 3.41
4397 4426 4.135153 CGACGGGGAGCACCTCAG 62.135 72.222 0.00 0.00 40.03 3.35
4405 4434 4.388499 CCAACCACCGACGGGGAG 62.388 72.222 20.29 10.57 39.97 4.30
4406 4435 4.938074 TCCAACCACCGACGGGGA 62.938 66.667 20.29 11.48 39.97 4.81
4407 4436 3.943691 TTCCAACCACCGACGGGG 61.944 66.667 20.00 15.35 43.62 5.73
4408 4437 2.667199 GTTCCAACCACCGACGGG 60.667 66.667 20.00 7.12 40.11 5.28
4409 4438 3.039588 CGTTCCAACCACCGACGG 61.040 66.667 13.61 13.61 0.00 4.79
4410 4439 2.027897 TCGTTCCAACCACCGACG 59.972 61.111 0.00 0.00 35.24 5.12
4411 4440 2.305127 CGTCGTTCCAACCACCGAC 61.305 63.158 0.00 0.00 44.51 4.79
4412 4441 2.027897 CGTCGTTCCAACCACCGA 59.972 61.111 0.00 0.00 0.00 4.69
4413 4442 2.279650 ACGTCGTTCCAACCACCG 60.280 61.111 0.00 0.00 0.00 4.94
4414 4443 1.219522 CTCACGTCGTTCCAACCACC 61.220 60.000 0.00 0.00 0.00 4.61
4415 4444 1.828331 GCTCACGTCGTTCCAACCAC 61.828 60.000 0.00 0.00 0.00 4.16
4416 4445 1.593209 GCTCACGTCGTTCCAACCA 60.593 57.895 0.00 0.00 0.00 3.67
4417 4446 2.315386 GGCTCACGTCGTTCCAACC 61.315 63.158 0.00 0.00 0.00 3.77
4418 4447 2.654912 CGGCTCACGTCGTTCCAAC 61.655 63.158 0.00 0.00 37.93 3.77
4419 4448 2.355363 CGGCTCACGTCGTTCCAA 60.355 61.111 0.00 0.00 37.93 3.53
4420 4449 4.351938 CCGGCTCACGTCGTTCCA 62.352 66.667 0.00 0.00 42.24 3.53
4438 4467 1.706287 GAAAGGAATCGAGGCACGGC 61.706 60.000 4.15 0.00 42.82 5.68
4439 4468 0.391130 TGAAAGGAATCGAGGCACGG 60.391 55.000 4.15 0.00 42.82 4.94
4440 4469 1.438651 TTGAAAGGAATCGAGGCACG 58.561 50.000 0.00 0.00 44.09 5.34
4441 4470 3.915437 TTTTGAAAGGAATCGAGGCAC 57.085 42.857 0.00 0.00 0.00 5.01
4442 4471 4.141287 TCTTTTTGAAAGGAATCGAGGCA 58.859 39.130 0.00 0.00 0.00 4.75
4443 4472 4.766404 TCTTTTTGAAAGGAATCGAGGC 57.234 40.909 0.00 0.00 0.00 4.70
4444 4473 6.500684 TCATCTTTTTGAAAGGAATCGAGG 57.499 37.500 0.00 0.00 0.00 4.63
4445 4474 7.025963 CCTTCATCTTTTTGAAAGGAATCGAG 58.974 38.462 0.00 0.00 35.31 4.04
4446 4475 6.071952 CCCTTCATCTTTTTGAAAGGAATCGA 60.072 38.462 1.10 0.00 38.84 3.59
4447 4476 6.071952 TCCCTTCATCTTTTTGAAAGGAATCG 60.072 38.462 2.76 0.00 41.22 3.34
4448 4477 7.093354 GTCCCTTCATCTTTTTGAAAGGAATC 58.907 38.462 6.19 0.00 44.10 2.52
4449 4478 6.554605 TGTCCCTTCATCTTTTTGAAAGGAAT 59.445 34.615 6.19 0.00 44.10 3.01
4450 4479 5.896678 TGTCCCTTCATCTTTTTGAAAGGAA 59.103 36.000 6.19 0.00 44.10 3.36
4451 4480 5.454062 TGTCCCTTCATCTTTTTGAAAGGA 58.546 37.500 1.10 1.34 41.68 3.36
4452 4481 5.536161 TCTGTCCCTTCATCTTTTTGAAAGG 59.464 40.000 1.04 0.00 38.18 3.11
4453 4482 6.294397 CCTCTGTCCCTTCATCTTTTTGAAAG 60.294 42.308 0.00 0.00 35.31 2.62
4454 4483 5.536161 CCTCTGTCCCTTCATCTTTTTGAAA 59.464 40.000 0.00 0.00 35.31 2.69
4455 4484 5.072741 CCTCTGTCCCTTCATCTTTTTGAA 58.927 41.667 0.00 0.00 34.55 2.69
4456 4485 4.104738 ACCTCTGTCCCTTCATCTTTTTGA 59.895 41.667 0.00 0.00 0.00 2.69
4457 4486 4.217118 CACCTCTGTCCCTTCATCTTTTTG 59.783 45.833 0.00 0.00 0.00 2.44
4458 4487 4.104738 TCACCTCTGTCCCTTCATCTTTTT 59.895 41.667 0.00 0.00 0.00 1.94
4459 4488 3.652869 TCACCTCTGTCCCTTCATCTTTT 59.347 43.478 0.00 0.00 0.00 2.27
4460 4489 3.008485 GTCACCTCTGTCCCTTCATCTTT 59.992 47.826 0.00 0.00 0.00 2.52
4461 4490 2.569404 GTCACCTCTGTCCCTTCATCTT 59.431 50.000 0.00 0.00 0.00 2.40
4462 4491 2.183679 GTCACCTCTGTCCCTTCATCT 58.816 52.381 0.00 0.00 0.00 2.90
4463 4492 2.183679 AGTCACCTCTGTCCCTTCATC 58.816 52.381 0.00 0.00 0.00 2.92
4464 4493 2.334006 AGTCACCTCTGTCCCTTCAT 57.666 50.000 0.00 0.00 0.00 2.57
4465 4494 2.992847 TAGTCACCTCTGTCCCTTCA 57.007 50.000 0.00 0.00 0.00 3.02
4466 4495 4.383226 GGAATTAGTCACCTCTGTCCCTTC 60.383 50.000 0.00 0.00 0.00 3.46
4467 4496 3.519913 GGAATTAGTCACCTCTGTCCCTT 59.480 47.826 0.00 0.00 0.00 3.95
4468 4497 3.108376 GGAATTAGTCACCTCTGTCCCT 58.892 50.000 0.00 0.00 0.00 4.20
4469 4498 2.170817 GGGAATTAGTCACCTCTGTCCC 59.829 54.545 0.00 0.00 0.00 4.46
4470 4499 3.108376 AGGGAATTAGTCACCTCTGTCC 58.892 50.000 0.00 0.00 0.00 4.02
4471 4500 5.836358 AGATAGGGAATTAGTCACCTCTGTC 59.164 44.000 0.00 0.00 34.59 3.51
4472 4501 5.782925 AGATAGGGAATTAGTCACCTCTGT 58.217 41.667 0.00 0.00 34.59 3.41
4473 4502 5.835819 TGAGATAGGGAATTAGTCACCTCTG 59.164 44.000 0.00 0.00 34.59 3.35
4474 4503 6.031964 TGAGATAGGGAATTAGTCACCTCT 57.968 41.667 0.00 0.00 34.59 3.69
4475 4504 6.926630 ATGAGATAGGGAATTAGTCACCTC 57.073 41.667 0.00 0.00 34.59 3.85
4476 4505 7.420680 CCAAATGAGATAGGGAATTAGTCACCT 60.421 40.741 0.00 0.00 37.13 4.00
4477 4506 6.712547 CCAAATGAGATAGGGAATTAGTCACC 59.287 42.308 0.00 0.00 0.00 4.02
4478 4507 6.712547 CCCAAATGAGATAGGGAATTAGTCAC 59.287 42.308 0.00 0.00 44.30 3.67
4479 4508 6.183361 CCCCAAATGAGATAGGGAATTAGTCA 60.183 42.308 0.00 0.00 44.30 3.41
4480 4509 6.241645 CCCCAAATGAGATAGGGAATTAGTC 58.758 44.000 0.00 0.00 44.30 2.59
4481 4510 5.458215 GCCCCAAATGAGATAGGGAATTAGT 60.458 44.000 0.00 0.00 44.30 2.24
4482 4511 5.012893 GCCCCAAATGAGATAGGGAATTAG 58.987 45.833 0.00 0.00 44.30 1.73
4483 4512 4.506625 CGCCCCAAATGAGATAGGGAATTA 60.507 45.833 0.00 0.00 44.30 1.40
4484 4513 3.751893 CGCCCCAAATGAGATAGGGAATT 60.752 47.826 0.00 0.00 44.30 2.17
4485 4514 2.224867 CGCCCCAAATGAGATAGGGAAT 60.225 50.000 0.00 0.00 44.30 3.01
4486 4515 1.142870 CGCCCCAAATGAGATAGGGAA 59.857 52.381 0.00 0.00 44.30 3.97
4487 4516 0.764890 CGCCCCAAATGAGATAGGGA 59.235 55.000 0.00 0.00 44.30 4.20
4488 4517 0.250901 CCGCCCCAAATGAGATAGGG 60.251 60.000 0.00 0.00 41.02 3.53
4489 4518 0.764890 TCCGCCCCAAATGAGATAGG 59.235 55.000 0.00 0.00 0.00 2.57
4490 4519 2.638480 TTCCGCCCCAAATGAGATAG 57.362 50.000 0.00 0.00 0.00 2.08
4491 4520 3.020984 GTTTTCCGCCCCAAATGAGATA 58.979 45.455 0.00 0.00 0.00 1.98
4492 4521 1.824852 GTTTTCCGCCCCAAATGAGAT 59.175 47.619 0.00 0.00 0.00 2.75
4493 4522 1.253100 GTTTTCCGCCCCAAATGAGA 58.747 50.000 0.00 0.00 0.00 3.27
4494 4523 0.109319 CGTTTTCCGCCCCAAATGAG 60.109 55.000 0.00 0.00 0.00 2.90
4495 4524 0.537600 TCGTTTTCCGCCCCAAATGA 60.538 50.000 0.00 0.00 36.19 2.57
4496 4525 0.315568 TTCGTTTTCCGCCCCAAATG 59.684 50.000 0.00 0.00 36.19 2.32
4497 4526 1.203758 GATTCGTTTTCCGCCCCAAAT 59.796 47.619 0.00 0.00 36.19 2.32
4498 4527 0.599060 GATTCGTTTTCCGCCCCAAA 59.401 50.000 0.00 0.00 36.19 3.28
4499 4528 1.579084 CGATTCGTTTTCCGCCCCAA 61.579 55.000 0.00 0.00 36.19 4.12
4500 4529 2.036006 CGATTCGTTTTCCGCCCCA 61.036 57.895 0.00 0.00 36.19 4.96
4501 4530 1.742510 TCGATTCGTTTTCCGCCCC 60.743 57.895 5.89 0.00 36.19 5.80
4502 4531 1.293267 TGTCGATTCGTTTTCCGCCC 61.293 55.000 5.89 0.00 36.19 6.13
4503 4532 0.725117 ATGTCGATTCGTTTTCCGCC 59.275 50.000 5.89 0.00 36.19 6.13
4504 4533 1.659098 AGATGTCGATTCGTTTTCCGC 59.341 47.619 5.89 0.00 36.19 5.54
4505 4534 3.554670 GAGATGTCGATTCGTTTTCCG 57.445 47.619 5.89 0.00 38.13 4.30
4520 4549 4.327982 AGGGTTGTATCACATCGAGATG 57.672 45.455 11.19 11.19 44.15 2.90
4521 4550 5.359194 AAAGGGTTGTATCACATCGAGAT 57.641 39.130 0.00 0.00 0.00 2.75
4522 4551 4.382685 GGAAAGGGTTGTATCACATCGAGA 60.383 45.833 0.00 0.00 0.00 4.04
4523 4552 3.871594 GGAAAGGGTTGTATCACATCGAG 59.128 47.826 0.00 0.00 0.00 4.04
4524 4553 3.262151 TGGAAAGGGTTGTATCACATCGA 59.738 43.478 0.00 0.00 0.00 3.59
4525 4554 3.605634 TGGAAAGGGTTGTATCACATCG 58.394 45.455 0.00 0.00 0.00 3.84
4526 4555 6.530019 AAATGGAAAGGGTTGTATCACATC 57.470 37.500 0.00 0.00 0.00 3.06
4527 4556 6.350110 CGAAAATGGAAAGGGTTGTATCACAT 60.350 38.462 0.00 0.00 0.00 3.21
4528 4557 5.048364 CGAAAATGGAAAGGGTTGTATCACA 60.048 40.000 0.00 0.00 0.00 3.58
4529 4558 5.048294 ACGAAAATGGAAAGGGTTGTATCAC 60.048 40.000 0.00 0.00 0.00 3.06
4530 4559 5.074115 ACGAAAATGGAAAGGGTTGTATCA 58.926 37.500 0.00 0.00 0.00 2.15
4531 4560 5.638596 ACGAAAATGGAAAGGGTTGTATC 57.361 39.130 0.00 0.00 0.00 2.24
4532 4561 5.279256 CCAACGAAAATGGAAAGGGTTGTAT 60.279 40.000 0.00 0.00 40.56 2.29
4533 4562 4.038162 CCAACGAAAATGGAAAGGGTTGTA 59.962 41.667 0.00 0.00 40.56 2.41
4534 4563 3.181470 CCAACGAAAATGGAAAGGGTTGT 60.181 43.478 0.00 0.00 40.56 3.32
4535 4564 3.389221 CCAACGAAAATGGAAAGGGTTG 58.611 45.455 0.00 0.00 40.56 3.77
4536 4565 2.367241 CCCAACGAAAATGGAAAGGGTT 59.633 45.455 0.00 0.00 40.56 4.11
4537 4566 1.967779 CCCAACGAAAATGGAAAGGGT 59.032 47.619 0.00 0.00 40.56 4.34
4538 4567 2.243810 TCCCAACGAAAATGGAAAGGG 58.756 47.619 0.00 0.00 40.56 3.95
4539 4568 4.329462 TTTCCCAACGAAAATGGAAAGG 57.671 40.909 0.00 0.00 40.86 3.11
4541 4570 5.353111 GTTCTTTCCCAACGAAAATGGAAA 58.647 37.500 0.00 0.00 42.86 3.13
4542 4571 4.939271 GTTCTTTCCCAACGAAAATGGAA 58.061 39.130 0.00 0.00 39.98 3.53
4543 4572 4.577834 GTTCTTTCCCAACGAAAATGGA 57.422 40.909 0.00 0.00 39.98 3.41
4551 4580 1.263217 CTTCACCGTTCTTTCCCAACG 59.737 52.381 0.00 0.00 45.03 4.10
4552 4581 2.289820 GACTTCACCGTTCTTTCCCAAC 59.710 50.000 0.00 0.00 0.00 3.77
4553 4582 2.567985 GACTTCACCGTTCTTTCCCAA 58.432 47.619 0.00 0.00 0.00 4.12
4554 4583 1.202722 GGACTTCACCGTTCTTTCCCA 60.203 52.381 0.00 0.00 0.00 4.37
4555 4584 1.202722 TGGACTTCACCGTTCTTTCCC 60.203 52.381 0.00 0.00 0.00 3.97
4556 4585 2.249844 TGGACTTCACCGTTCTTTCC 57.750 50.000 0.00 0.00 0.00 3.13
4557 4586 2.742589 GGATGGACTTCACCGTTCTTTC 59.257 50.000 0.00 0.00 0.00 2.62
4558 4587 2.779506 GGATGGACTTCACCGTTCTTT 58.220 47.619 0.00 0.00 0.00 2.52
4559 4588 1.337823 CGGATGGACTTCACCGTTCTT 60.338 52.381 0.00 0.00 40.42 2.52
4560 4589 0.246635 CGGATGGACTTCACCGTTCT 59.753 55.000 0.00 0.00 40.42 3.01
4561 4590 0.245539 TCGGATGGACTTCACCGTTC 59.754 55.000 0.00 0.00 44.72 3.95
4562 4591 0.682852 TTCGGATGGACTTCACCGTT 59.317 50.000 0.00 0.00 44.72 4.44
4563 4592 0.037605 GTTCGGATGGACTTCACCGT 60.038 55.000 0.00 0.00 44.72 4.83
4564 4593 0.739813 GGTTCGGATGGACTTCACCG 60.740 60.000 0.00 0.00 45.61 4.94
4565 4594 0.392595 GGGTTCGGATGGACTTCACC 60.393 60.000 0.00 0.00 0.00 4.02
4566 4595 0.613777 AGGGTTCGGATGGACTTCAC 59.386 55.000 0.00 0.00 0.00 3.18
4567 4596 0.902531 GAGGGTTCGGATGGACTTCA 59.097 55.000 0.00 0.00 0.00 3.02
4568 4597 0.178301 GGAGGGTTCGGATGGACTTC 59.822 60.000 0.00 0.00 0.00 3.01
4569 4598 0.546747 TGGAGGGTTCGGATGGACTT 60.547 55.000 0.00 0.00 0.00 3.01
4570 4599 0.546747 TTGGAGGGTTCGGATGGACT 60.547 55.000 0.00 0.00 0.00 3.85
4571 4600 0.546598 ATTGGAGGGTTCGGATGGAC 59.453 55.000 0.00 0.00 0.00 4.02
4572 4601 0.546122 CATTGGAGGGTTCGGATGGA 59.454 55.000 0.00 0.00 0.00 3.41
4573 4602 0.546122 TCATTGGAGGGTTCGGATGG 59.454 55.000 0.00 0.00 0.00 3.51
4574 4603 2.092968 TCTTCATTGGAGGGTTCGGATG 60.093 50.000 0.00 0.00 0.00 3.51
4575 4604 2.196595 TCTTCATTGGAGGGTTCGGAT 58.803 47.619 0.00 0.00 0.00 4.18
4576 4605 1.651737 TCTTCATTGGAGGGTTCGGA 58.348 50.000 0.00 0.00 0.00 4.55
4577 4606 2.489938 TTCTTCATTGGAGGGTTCGG 57.510 50.000 0.00 0.00 0.00 4.30
4578 4607 5.880332 TCTTATTTCTTCATTGGAGGGTTCG 59.120 40.000 0.00 0.00 0.00 3.95
4579 4608 6.319911 CCTCTTATTTCTTCATTGGAGGGTTC 59.680 42.308 0.00 0.00 36.44 3.62
4580 4609 6.011628 TCCTCTTATTTCTTCATTGGAGGGTT 60.012 38.462 0.00 0.00 39.41 4.11
4581 4610 5.492524 TCCTCTTATTTCTTCATTGGAGGGT 59.507 40.000 0.00 0.00 39.41 4.34
4582 4611 6.006275 TCCTCTTATTTCTTCATTGGAGGG 57.994 41.667 0.00 0.00 39.41 4.30
4583 4612 6.893583 TCTCCTCTTATTTCTTCATTGGAGG 58.106 40.000 0.00 0.00 39.06 4.30
4584 4613 6.482973 GCTCTCCTCTTATTTCTTCATTGGAG 59.517 42.308 0.00 0.00 39.69 3.86
4585 4614 6.070021 TGCTCTCCTCTTATTTCTTCATTGGA 60.070 38.462 0.00 0.00 0.00 3.53
4586 4615 6.118170 TGCTCTCCTCTTATTTCTTCATTGG 58.882 40.000 0.00 0.00 0.00 3.16
4587 4616 7.621428 TTGCTCTCCTCTTATTTCTTCATTG 57.379 36.000 0.00 0.00 0.00 2.82
4588 4617 7.148103 GCTTTGCTCTCCTCTTATTTCTTCATT 60.148 37.037 0.00 0.00 0.00 2.57
4589 4618 6.318396 GCTTTGCTCTCCTCTTATTTCTTCAT 59.682 38.462 0.00 0.00 0.00 2.57
4590 4619 5.645497 GCTTTGCTCTCCTCTTATTTCTTCA 59.355 40.000 0.00 0.00 0.00 3.02
4591 4620 5.065859 GGCTTTGCTCTCCTCTTATTTCTTC 59.934 44.000 0.00 0.00 0.00 2.87
4592 4621 4.946772 GGCTTTGCTCTCCTCTTATTTCTT 59.053 41.667 0.00 0.00 0.00 2.52
4593 4622 4.522114 GGCTTTGCTCTCCTCTTATTTCT 58.478 43.478 0.00 0.00 0.00 2.52
4594 4623 3.629855 GGGCTTTGCTCTCCTCTTATTTC 59.370 47.826 0.00 0.00 0.00 2.17
4595 4624 3.010584 TGGGCTTTGCTCTCCTCTTATTT 59.989 43.478 0.00 0.00 0.00 1.40
4596 4625 2.578021 TGGGCTTTGCTCTCCTCTTATT 59.422 45.455 0.00 0.00 0.00 1.40
4597 4626 2.200081 TGGGCTTTGCTCTCCTCTTAT 58.800 47.619 0.00 0.00 0.00 1.73
4598 4627 1.656587 TGGGCTTTGCTCTCCTCTTA 58.343 50.000 0.00 0.00 0.00 2.10
4599 4628 0.773644 TTGGGCTTTGCTCTCCTCTT 59.226 50.000 0.00 0.00 0.00 2.85
4600 4629 0.998145 ATTGGGCTTTGCTCTCCTCT 59.002 50.000 0.00 0.00 0.00 3.69
4601 4630 1.101331 CATTGGGCTTTGCTCTCCTC 58.899 55.000 0.00 0.00 0.00 3.71
4602 4631 0.324091 CCATTGGGCTTTGCTCTCCT 60.324 55.000 0.00 0.00 0.00 3.69
4603 4632 2.196319 CCATTGGGCTTTGCTCTCC 58.804 57.895 0.00 0.00 0.00 3.71
4626 4655 4.228097 CCTTCCGCATGCGCTTCG 62.228 66.667 34.00 20.34 38.24 3.79
4627 4656 3.880846 CCCTTCCGCATGCGCTTC 61.881 66.667 34.00 0.00 38.24 3.86
4633 4662 3.136123 CTGTGCCCCTTCCGCATG 61.136 66.667 0.00 0.00 38.76 4.06
4634 4663 3.329889 TCTGTGCCCCTTCCGCAT 61.330 61.111 0.00 0.00 38.76 4.73
4635 4664 4.020617 CTCTGTGCCCCTTCCGCA 62.021 66.667 0.00 0.00 0.00 5.69
4636 4665 2.748058 TTTCTCTGTGCCCCTTCCGC 62.748 60.000 0.00 0.00 0.00 5.54
4637 4666 0.035056 ATTTCTCTGTGCCCCTTCCG 60.035 55.000 0.00 0.00 0.00 4.30
4638 4667 3.366052 TTATTTCTCTGTGCCCCTTCC 57.634 47.619 0.00 0.00 0.00 3.46
4639 4668 4.589908 TCTTTATTTCTCTGTGCCCCTTC 58.410 43.478 0.00 0.00 0.00 3.46
4640 4669 4.657814 TCTTTATTTCTCTGTGCCCCTT 57.342 40.909 0.00 0.00 0.00 3.95
4641 4670 4.043435 ACTTCTTTATTTCTCTGTGCCCCT 59.957 41.667 0.00 0.00 0.00 4.79
4642 4671 4.156739 CACTTCTTTATTTCTCTGTGCCCC 59.843 45.833 0.00 0.00 0.00 5.80
4643 4672 4.762251 ACACTTCTTTATTTCTCTGTGCCC 59.238 41.667 0.00 0.00 0.00 5.36
4644 4673 5.335191 CCACACTTCTTTATTTCTCTGTGCC 60.335 44.000 0.00 0.00 0.00 5.01
4645 4674 5.335191 CCCACACTTCTTTATTTCTCTGTGC 60.335 44.000 0.00 0.00 0.00 4.57
4646 4675 5.182001 CCCCACACTTCTTTATTTCTCTGTG 59.818 44.000 0.00 0.00 0.00 3.66
4647 4676 5.316987 CCCCACACTTCTTTATTTCTCTGT 58.683 41.667 0.00 0.00 0.00 3.41
4648 4677 4.702131 CCCCCACACTTCTTTATTTCTCTG 59.298 45.833 0.00 0.00 0.00 3.35
4649 4678 4.601857 TCCCCCACACTTCTTTATTTCTCT 59.398 41.667 0.00 0.00 0.00 3.10
4650 4679 4.918588 TCCCCCACACTTCTTTATTTCTC 58.081 43.478 0.00 0.00 0.00 2.87
4651 4680 4.601857 TCTCCCCCACACTTCTTTATTTCT 59.398 41.667 0.00 0.00 0.00 2.52
4652 4681 4.918588 TCTCCCCCACACTTCTTTATTTC 58.081 43.478 0.00 0.00 0.00 2.17
4653 4682 5.325239 CTTCTCCCCCACACTTCTTTATTT 58.675 41.667 0.00 0.00 0.00 1.40
4654 4683 4.811063 GCTTCTCCCCCACACTTCTTTATT 60.811 45.833 0.00 0.00 0.00 1.40
4655 4684 3.308473 GCTTCTCCCCCACACTTCTTTAT 60.308 47.826 0.00 0.00 0.00 1.40
4656 4685 2.039879 GCTTCTCCCCCACACTTCTTTA 59.960 50.000 0.00 0.00 0.00 1.85
4657 4686 1.202940 GCTTCTCCCCCACACTTCTTT 60.203 52.381 0.00 0.00 0.00 2.52
4658 4687 0.402121 GCTTCTCCCCCACACTTCTT 59.598 55.000 0.00 0.00 0.00 2.52
4659 4688 0.768221 TGCTTCTCCCCCACACTTCT 60.768 55.000 0.00 0.00 0.00 2.85
4660 4689 0.322008 CTGCTTCTCCCCCACACTTC 60.322 60.000 0.00 0.00 0.00 3.01
4661 4690 1.763770 CTGCTTCTCCCCCACACTT 59.236 57.895 0.00 0.00 0.00 3.16
4662 4691 2.900106 GCTGCTTCTCCCCCACACT 61.900 63.158 0.00 0.00 0.00 3.55
4663 4692 2.360475 GCTGCTTCTCCCCCACAC 60.360 66.667 0.00 0.00 0.00 3.82
4664 4693 3.650950 GGCTGCTTCTCCCCCACA 61.651 66.667 0.00 0.00 0.00 4.17
4665 4694 4.785453 CGGCTGCTTCTCCCCCAC 62.785 72.222 0.00 0.00 0.00 4.61
4667 4696 4.168291 CTCGGCTGCTTCTCCCCC 62.168 72.222 0.00 0.00 0.00 5.40
4668 4697 2.860972 GAACTCGGCTGCTTCTCCCC 62.861 65.000 0.00 0.00 0.00 4.81
4669 4698 1.448717 GAACTCGGCTGCTTCTCCC 60.449 63.158 0.00 0.00 0.00 4.30
4670 4699 0.107945 ATGAACTCGGCTGCTTCTCC 60.108 55.000 0.00 0.00 0.00 3.71
4671 4700 1.663135 GAATGAACTCGGCTGCTTCTC 59.337 52.381 0.00 0.00 0.00 2.87
4672 4701 1.677217 GGAATGAACTCGGCTGCTTCT 60.677 52.381 0.00 0.00 0.00 2.85
4673 4702 0.729690 GGAATGAACTCGGCTGCTTC 59.270 55.000 0.00 0.00 0.00 3.86
4674 4703 0.678048 GGGAATGAACTCGGCTGCTT 60.678 55.000 0.00 0.00 0.00 3.91
4675 4704 1.078143 GGGAATGAACTCGGCTGCT 60.078 57.895 0.00 0.00 0.00 4.24
4676 4705 0.678048 AAGGGAATGAACTCGGCTGC 60.678 55.000 0.00 0.00 0.00 5.25
4677 4706 1.470098 CAAAGGGAATGAACTCGGCTG 59.530 52.381 0.00 0.00 0.00 4.85
4678 4707 1.826385 CAAAGGGAATGAACTCGGCT 58.174 50.000 0.00 0.00 0.00 5.52
4679 4708 0.171231 GCAAAGGGAATGAACTCGGC 59.829 55.000 0.00 0.00 0.00 5.54
4680 4709 1.826385 AGCAAAGGGAATGAACTCGG 58.174 50.000 0.00 0.00 0.00 4.63
4681 4710 2.162408 GGAAGCAAAGGGAATGAACTCG 59.838 50.000 0.00 0.00 0.00 4.18
4682 4711 3.192212 CAGGAAGCAAAGGGAATGAACTC 59.808 47.826 0.00 0.00 0.00 3.01
4683 4712 3.160269 CAGGAAGCAAAGGGAATGAACT 58.840 45.455 0.00 0.00 0.00 3.01
4684 4713 2.232208 CCAGGAAGCAAAGGGAATGAAC 59.768 50.000 0.00 0.00 0.00 3.18
4685 4714 2.528564 CCAGGAAGCAAAGGGAATGAA 58.471 47.619 0.00 0.00 0.00 2.57
4686 4715 1.272648 CCCAGGAAGCAAAGGGAATGA 60.273 52.381 0.00 0.00 44.30 2.57
4687 4716 1.188863 CCCAGGAAGCAAAGGGAATG 58.811 55.000 0.00 0.00 44.30 2.67
4688 4717 0.615827 GCCCAGGAAGCAAAGGGAAT 60.616 55.000 0.00 0.00 44.30 3.01
4689 4718 1.228862 GCCCAGGAAGCAAAGGGAA 60.229 57.895 0.00 0.00 44.30 3.97
4690 4719 2.440599 GCCCAGGAAGCAAAGGGA 59.559 61.111 0.00 0.00 44.30 4.20
4691 4720 2.681421 GGCCCAGGAAGCAAAGGG 60.681 66.667 0.00 0.00 44.37 3.95
4692 4721 2.681421 GGGCCCAGGAAGCAAAGG 60.681 66.667 19.95 0.00 0.00 3.11
4693 4722 1.120795 TTTGGGCCCAGGAAGCAAAG 61.121 55.000 26.87 0.00 0.00 2.77
4694 4723 1.074926 TTTGGGCCCAGGAAGCAAA 60.075 52.632 26.87 12.07 0.00 3.68
4695 4724 1.533753 CTTTGGGCCCAGGAAGCAA 60.534 57.895 26.87 14.58 0.00 3.91
4696 4725 2.118076 CTTTGGGCCCAGGAAGCA 59.882 61.111 26.87 5.91 0.00 3.91
4697 4726 3.385384 GCTTTGGGCCCAGGAAGC 61.385 66.667 34.59 34.59 37.88 3.86
4698 4727 1.980772 CTGCTTTGGGCCCAGGAAG 60.981 63.158 26.11 26.11 40.92 3.46
4699 4728 2.118076 CTGCTTTGGGCCCAGGAA 59.882 61.111 26.87 17.01 40.92 3.36
4700 4729 3.185203 ACTGCTTTGGGCCCAGGA 61.185 61.111 26.87 15.23 40.92 3.86
4701 4730 2.993264 CACTGCTTTGGGCCCAGG 60.993 66.667 26.87 22.20 40.92 4.45
4702 4731 1.402107 AAACACTGCTTTGGGCCCAG 61.402 55.000 26.87 16.29 40.92 4.45
4703 4732 0.980231 AAAACACTGCTTTGGGCCCA 60.980 50.000 24.45 24.45 40.92 5.36
4704 4733 0.532640 CAAAACACTGCTTTGGGCCC 60.533 55.000 17.59 17.59 40.92 5.80
4705 4734 0.177836 ACAAAACACTGCTTTGGGCC 59.822 50.000 9.23 0.00 37.96 5.80
4706 4735 2.022764 AACAAAACACTGCTTTGGGC 57.977 45.000 9.23 0.00 37.96 5.36
4707 4736 2.935849 GGAAACAAAACACTGCTTTGGG 59.064 45.455 9.23 0.00 37.96 4.12
4708 4737 3.618150 CAGGAAACAAAACACTGCTTTGG 59.382 43.478 9.23 0.00 37.96 3.28
4709 4738 3.618150 CCAGGAAACAAAACACTGCTTTG 59.382 43.478 3.77 3.77 39.26 2.77
4710 4739 3.860641 CCAGGAAACAAAACACTGCTTT 58.139 40.909 0.00 0.00 0.00 3.51
4711 4740 2.418609 GCCAGGAAACAAAACACTGCTT 60.419 45.455 0.00 0.00 0.00 3.91
4712 4741 1.136891 GCCAGGAAACAAAACACTGCT 59.863 47.619 0.00 0.00 0.00 4.24
4713 4742 1.570813 GCCAGGAAACAAAACACTGC 58.429 50.000 0.00 0.00 0.00 4.40
4714 4743 1.480137 TGGCCAGGAAACAAAACACTG 59.520 47.619 0.00 0.00 0.00 3.66
4715 4744 1.859302 TGGCCAGGAAACAAAACACT 58.141 45.000 0.00 0.00 0.00 3.55
4716 4745 2.682155 TTGGCCAGGAAACAAAACAC 57.318 45.000 5.11 0.00 0.00 3.32
4717 4746 3.198635 TGATTTGGCCAGGAAACAAAACA 59.801 39.130 5.11 0.00 37.60 2.83
4718 4747 3.802866 TGATTTGGCCAGGAAACAAAAC 58.197 40.909 5.11 0.00 37.60 2.43
4719 4748 4.450053 CTTGATTTGGCCAGGAAACAAAA 58.550 39.130 5.11 0.00 37.60 2.44
4720 4749 3.181456 CCTTGATTTGGCCAGGAAACAAA 60.181 43.478 5.11 0.00 38.33 2.83
4721 4750 2.368221 CCTTGATTTGGCCAGGAAACAA 59.632 45.455 5.11 9.05 0.00 2.83
4722 4751 1.969923 CCTTGATTTGGCCAGGAAACA 59.030 47.619 5.11 0.00 0.00 2.83
4723 4752 2.247358 TCCTTGATTTGGCCAGGAAAC 58.753 47.619 5.11 0.00 0.00 2.78
4724 4753 2.692709 TCCTTGATTTGGCCAGGAAA 57.307 45.000 5.11 0.00 0.00 3.13
4725 4754 2.925966 ATCCTTGATTTGGCCAGGAA 57.074 45.000 12.74 2.59 0.00 3.36
4726 4755 2.925966 AATCCTTGATTTGGCCAGGA 57.074 45.000 11.27 11.27 0.00 3.86
4734 4763 3.188880 TCAGCCCCAAATCCTTGATTT 57.811 42.857 0.00 0.00 42.14 2.17
4735 4764 2.925966 TCAGCCCCAAATCCTTGATT 57.074 45.000 0.00 0.00 34.14 2.57
4736 4765 3.036091 CAATCAGCCCCAAATCCTTGAT 58.964 45.455 0.00 0.00 34.14 2.57
4737 4766 2.459644 CAATCAGCCCCAAATCCTTGA 58.540 47.619 0.00 0.00 34.14 3.02
4738 4767 1.134610 GCAATCAGCCCCAAATCCTTG 60.135 52.381 0.00 0.00 37.23 3.61
4739 4768 1.197812 GCAATCAGCCCCAAATCCTT 58.802 50.000 0.00 0.00 37.23 3.36
4740 4769 0.041535 TGCAATCAGCCCCAAATCCT 59.958 50.000 0.00 0.00 44.83 3.24
4741 4770 0.903942 TTGCAATCAGCCCCAAATCC 59.096 50.000 0.00 0.00 44.83 3.01
4742 4771 2.766345 TTTGCAATCAGCCCCAAATC 57.234 45.000 0.00 0.00 44.83 2.17
4743 4772 2.638855 TCTTTTGCAATCAGCCCCAAAT 59.361 40.909 0.00 0.00 44.83 2.32
4744 4773 2.045524 TCTTTTGCAATCAGCCCCAAA 58.954 42.857 0.00 0.00 44.83 3.28
4745 4774 1.714541 TCTTTTGCAATCAGCCCCAA 58.285 45.000 0.00 0.00 44.83 4.12
4746 4775 1.941377 ATCTTTTGCAATCAGCCCCA 58.059 45.000 0.00 0.00 44.83 4.96
4747 4776 3.893813 AGATATCTTTTGCAATCAGCCCC 59.106 43.478 0.00 0.00 44.83 5.80
4748 4777 4.581824 TCAGATATCTTTTGCAATCAGCCC 59.418 41.667 1.33 0.00 44.83 5.19
4749 4778 5.762825 TCAGATATCTTTTGCAATCAGCC 57.237 39.130 1.33 0.00 44.83 4.85
4750 4779 8.781196 TCTATTCAGATATCTTTTGCAATCAGC 58.219 33.333 1.33 0.00 45.96 4.26
4766 4795 9.558133 TGGATGGATCTATCTTTCTATTCAGAT 57.442 33.333 17.50 0.00 34.08 2.90
4767 4796 8.962912 TGGATGGATCTATCTTTCTATTCAGA 57.037 34.615 17.50 0.00 0.00 3.27
4768 4797 9.820725 GATGGATGGATCTATCTTTCTATTCAG 57.179 37.037 17.50 0.00 40.41 3.02
4780 4809 9.772605 GATAGATGGATAGATGGATGGATCTAT 57.227 37.037 0.00 0.00 44.81 1.98
4781 4810 8.968655 AGATAGATGGATAGATGGATGGATCTA 58.031 37.037 0.00 0.00 38.90 1.98
4782 4811 7.839293 AGATAGATGGATAGATGGATGGATCT 58.161 38.462 0.00 0.00 36.61 2.75
4783 4812 9.599056 TTAGATAGATGGATAGATGGATGGATC 57.401 37.037 0.00 0.00 0.00 3.36
4784 4813 9.964408 TTTAGATAGATGGATAGATGGATGGAT 57.036 33.333 0.00 0.00 0.00 3.41
4785 4814 9.788815 TTTTAGATAGATGGATAGATGGATGGA 57.211 33.333 0.00 0.00 0.00 3.41
4818 4847 6.801377 TCAAAGGTTTCATGAAATCGAAATCG 59.199 34.615 23.05 10.92 37.33 3.34
4819 4848 8.693542 ATCAAAGGTTTCATGAAATCGAAATC 57.306 30.769 23.05 8.87 36.56 2.17
4820 4849 9.143631 GAATCAAAGGTTTCATGAAATCGAAAT 57.856 29.630 23.05 13.18 36.56 2.17
4821 4850 8.140628 TGAATCAAAGGTTTCATGAAATCGAAA 58.859 29.630 23.05 11.64 36.56 3.46
4822 4851 7.656412 TGAATCAAAGGTTTCATGAAATCGAA 58.344 30.769 23.05 11.32 36.56 3.71
4823 4852 7.213216 TGAATCAAAGGTTTCATGAAATCGA 57.787 32.000 23.05 15.36 36.56 3.59
4824 4853 7.872163 TTGAATCAAAGGTTTCATGAAATCG 57.128 32.000 23.05 10.74 36.56 3.34
4839 4868 5.278463 GCTAGGCACAGTTCTTTGAATCAAA 60.278 40.000 8.25 8.25 0.00 2.69
4840 4869 4.216257 GCTAGGCACAGTTCTTTGAATCAA 59.784 41.667 0.00 0.00 0.00 2.57
4841 4870 3.753272 GCTAGGCACAGTTCTTTGAATCA 59.247 43.478 0.00 0.00 0.00 2.57
4842 4871 3.127721 GGCTAGGCACAGTTCTTTGAATC 59.872 47.826 12.16 0.00 0.00 2.52
4843 4872 3.084786 GGCTAGGCACAGTTCTTTGAAT 58.915 45.455 12.16 0.00 0.00 2.57
4844 4873 2.504367 GGCTAGGCACAGTTCTTTGAA 58.496 47.619 12.16 0.00 0.00 2.69
4845 4874 1.271379 GGGCTAGGCACAGTTCTTTGA 60.271 52.381 19.14 0.00 0.00 2.69
4846 4875 1.168714 GGGCTAGGCACAGTTCTTTG 58.831 55.000 19.14 0.00 0.00 2.77
4847 4876 3.652581 GGGCTAGGCACAGTTCTTT 57.347 52.632 19.14 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.