Multiple sequence alignment - TraesCS7A01G496700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G496700 chr7A 100.000 2531 0 0 1 2531 686634457 686636987 0.000000e+00 4674.0
1 TraesCS7A01G496700 chr7A 98.987 1974 18 2 560 2531 40032041 40034014 0.000000e+00 3533.0
2 TraesCS7A01G496700 chr7A 93.780 209 12 1 354 562 686779513 686779306 1.890000e-81 313.0
3 TraesCS7A01G496700 chr7A 90.303 165 16 0 398 562 686797741 686797577 1.520000e-52 217.0
4 TraesCS7A01G496700 chr4B 99.290 1973 10 3 563 2531 437234399 437236371 0.000000e+00 3563.0
5 TraesCS7A01G496700 chr7B 99.240 1973 12 2 562 2531 697603942 697601970 0.000000e+00 3557.0
6 TraesCS7A01G496700 chr7B 85.714 70 9 1 355 423 667097898 667097967 3.490000e-09 73.1
7 TraesCS7A01G496700 chr3A 99.239 1971 9 4 563 2531 658743970 658742004 0.000000e+00 3552.0
8 TraesCS7A01G496700 chr3A 88.462 286 27 3 113 398 83239139 83238860 8.670000e-90 340.0
9 TraesCS7A01G496700 chr6A 99.037 1974 16 2 561 2531 593775861 593773888 0.000000e+00 3537.0
10 TraesCS7A01G496700 chr4A 98.888 1978 17 3 559 2531 620586041 620588018 0.000000e+00 3526.0
11 TraesCS7A01G496700 chr4A 98.838 1979 18 4 558 2531 724630107 724632085 0.000000e+00 3522.0
12 TraesCS7A01G496700 chr4A 92.126 254 18 2 104 356 615435022 615435274 8.610000e-95 357.0
13 TraesCS7A01G496700 chr1B 98.887 1976 20 2 558 2531 637367019 637365044 0.000000e+00 3526.0
14 TraesCS7A01G496700 chr5B 98.935 1971 19 2 563 2531 705811763 705813733 0.000000e+00 3522.0
15 TraesCS7A01G496700 chr1D 93.443 244 16 0 114 357 487437240 487436997 1.850000e-96 363.0
16 TraesCS7A01G496700 chr1D 92.653 245 18 0 113 357 448103136 448103380 1.110000e-93 353.0
17 TraesCS7A01G496700 chr2B 93.416 243 16 0 114 356 135101660 135101418 6.660000e-96 361.0
18 TraesCS7A01G496700 chr2D 93.033 244 17 0 113 356 541547288 541547531 8.610000e-95 357.0
19 TraesCS7A01G496700 chr6D 92.095 253 19 1 113 364 22077921 22077669 3.100000e-94 355.0
20 TraesCS7A01G496700 chr4D 93.004 243 17 0 114 356 115044279 115044521 3.100000e-94 355.0
21 TraesCS7A01G496700 chr2A 91.406 256 21 1 107 361 573237802 573237547 1.440000e-92 350.0
22 TraesCS7A01G496700 chr7D 88.517 209 22 2 355 562 594794838 594795045 4.180000e-63 252.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G496700 chr7A 686634457 686636987 2530 False 4674 4674 100.000 1 2531 1 chr7A.!!$F2 2530
1 TraesCS7A01G496700 chr7A 40032041 40034014 1973 False 3533 3533 98.987 560 2531 1 chr7A.!!$F1 1971
2 TraesCS7A01G496700 chr4B 437234399 437236371 1972 False 3563 3563 99.290 563 2531 1 chr4B.!!$F1 1968
3 TraesCS7A01G496700 chr7B 697601970 697603942 1972 True 3557 3557 99.240 562 2531 1 chr7B.!!$R1 1969
4 TraesCS7A01G496700 chr3A 658742004 658743970 1966 True 3552 3552 99.239 563 2531 1 chr3A.!!$R2 1968
5 TraesCS7A01G496700 chr6A 593773888 593775861 1973 True 3537 3537 99.037 561 2531 1 chr6A.!!$R1 1970
6 TraesCS7A01G496700 chr4A 620586041 620588018 1977 False 3526 3526 98.888 559 2531 1 chr4A.!!$F2 1972
7 TraesCS7A01G496700 chr4A 724630107 724632085 1978 False 3522 3522 98.838 558 2531 1 chr4A.!!$F3 1973
8 TraesCS7A01G496700 chr1B 637365044 637367019 1975 True 3526 3526 98.887 558 2531 1 chr1B.!!$R1 1973
9 TraesCS7A01G496700 chr5B 705811763 705813733 1970 False 3522 3522 98.935 563 2531 1 chr5B.!!$F1 1968

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
93 94 0.031585 TTACTGGCGCGCTATCGAAT 59.968 50.0 32.29 11.99 38.10 3.34 F
270 271 0.037882 TTGAGAGCTCGGCACTGAAG 60.038 55.0 8.37 0.00 28.14 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 1393 6.822676 TGCCAATTTTCTTCAATTCACACTTT 59.177 30.769 0.00 0.0 0.00 2.66 R
2171 2179 0.105039 GCTATGGGTTGCTACGAGCT 59.895 55.000 8.07 0.0 42.97 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.791867 ATGTGGTACAATACTCTCTAAGCA 57.208 37.500 0.00 0.00 44.16 3.91
24 25 5.962433 TGTGGTACAATACTCTCTAAGCAC 58.038 41.667 0.00 0.00 44.16 4.40
25 26 5.479027 TGTGGTACAATACTCTCTAAGCACA 59.521 40.000 0.00 0.00 44.16 4.57
26 27 6.014925 TGTGGTACAATACTCTCTAAGCACAA 60.015 38.462 0.00 0.00 44.16 3.33
27 28 6.872020 GTGGTACAATACTCTCTAAGCACAAA 59.128 38.462 0.00 0.00 44.16 2.83
28 29 7.386848 GTGGTACAATACTCTCTAAGCACAAAA 59.613 37.037 0.00 0.00 44.16 2.44
29 30 8.100791 TGGTACAATACTCTCTAAGCACAAAAT 58.899 33.333 0.00 0.00 31.92 1.82
30 31 8.947115 GGTACAATACTCTCTAAGCACAAAATT 58.053 33.333 0.00 0.00 0.00 1.82
31 32 9.760660 GTACAATACTCTCTAAGCACAAAATTG 57.239 33.333 0.00 0.00 0.00 2.32
32 33 8.621532 ACAATACTCTCTAAGCACAAAATTGA 57.378 30.769 0.00 0.00 0.00 2.57
33 34 8.725148 ACAATACTCTCTAAGCACAAAATTGAG 58.275 33.333 0.00 0.00 0.00 3.02
34 35 5.619625 ACTCTCTAAGCACAAAATTGAGC 57.380 39.130 7.37 7.37 43.69 4.26
35 36 5.065914 ACTCTCTAAGCACAAAATTGAGCA 58.934 37.500 16.00 0.00 45.38 4.26
36 37 5.180868 ACTCTCTAAGCACAAAATTGAGCAG 59.819 40.000 16.00 7.27 45.38 4.24
37 38 4.456911 TCTCTAAGCACAAAATTGAGCAGG 59.543 41.667 16.00 7.06 45.38 4.85
38 39 4.144297 TCTAAGCACAAAATTGAGCAGGT 58.856 39.130 16.00 5.39 45.38 4.00
39 40 3.375782 AAGCACAAAATTGAGCAGGTC 57.624 42.857 16.00 0.00 45.38 3.85
40 41 1.615392 AGCACAAAATTGAGCAGGTCC 59.385 47.619 16.00 0.00 45.38 4.46
41 42 1.340889 GCACAAAATTGAGCAGGTCCA 59.659 47.619 10.12 0.00 43.01 4.02
42 43 2.224018 GCACAAAATTGAGCAGGTCCAA 60.224 45.455 10.12 0.00 43.01 3.53
43 44 3.383761 CACAAAATTGAGCAGGTCCAAC 58.616 45.455 0.00 0.00 0.00 3.77
44 45 3.068590 CACAAAATTGAGCAGGTCCAACT 59.931 43.478 0.00 0.00 0.00 3.16
45 46 3.319122 ACAAAATTGAGCAGGTCCAACTC 59.681 43.478 0.00 4.57 0.00 3.01
46 47 2.206576 AATTGAGCAGGTCCAACTCC 57.793 50.000 8.31 0.00 0.00 3.85
47 48 1.366319 ATTGAGCAGGTCCAACTCCT 58.634 50.000 8.31 0.00 35.45 3.69
48 49 2.024176 TTGAGCAGGTCCAACTCCTA 57.976 50.000 8.31 0.00 33.54 2.94
49 50 1.561643 TGAGCAGGTCCAACTCCTAG 58.438 55.000 8.31 0.00 33.54 3.02
50 51 1.203187 TGAGCAGGTCCAACTCCTAGT 60.203 52.381 8.31 0.00 33.54 2.57
51 52 1.903183 GAGCAGGTCCAACTCCTAGTT 59.097 52.381 0.00 0.00 39.39 2.24
52 53 3.097614 GAGCAGGTCCAACTCCTAGTTA 58.902 50.000 0.00 0.00 36.03 2.24
53 54 3.514309 GAGCAGGTCCAACTCCTAGTTAA 59.486 47.826 0.00 0.00 36.03 2.01
54 55 3.261137 AGCAGGTCCAACTCCTAGTTAAC 59.739 47.826 0.00 0.00 36.03 2.01
55 56 3.007614 GCAGGTCCAACTCCTAGTTAACA 59.992 47.826 8.61 0.00 36.03 2.41
56 57 4.822026 CAGGTCCAACTCCTAGTTAACAG 58.178 47.826 8.61 3.45 36.03 3.16
57 58 4.527038 CAGGTCCAACTCCTAGTTAACAGA 59.473 45.833 8.61 0.75 36.03 3.41
58 59 4.773149 AGGTCCAACTCCTAGTTAACAGAG 59.227 45.833 8.61 12.59 36.03 3.35
59 60 4.527427 GGTCCAACTCCTAGTTAACAGAGT 59.473 45.833 16.03 16.03 41.25 3.24
60 61 5.336610 GGTCCAACTCCTAGTTAACAGAGTC 60.337 48.000 19.86 11.27 38.61 3.36
61 62 5.477637 GTCCAACTCCTAGTTAACAGAGTCT 59.522 44.000 19.86 11.41 38.61 3.24
62 63 6.658391 GTCCAACTCCTAGTTAACAGAGTCTA 59.342 42.308 19.86 10.23 38.61 2.59
63 64 6.658391 TCCAACTCCTAGTTAACAGAGTCTAC 59.342 42.308 19.86 0.00 38.61 2.59
64 65 6.433404 CCAACTCCTAGTTAACAGAGTCTACA 59.567 42.308 19.86 0.00 38.61 2.74
65 66 7.306953 CAACTCCTAGTTAACAGAGTCTACAC 58.693 42.308 19.86 0.00 38.61 2.90
66 67 6.781943 ACTCCTAGTTAACAGAGTCTACACT 58.218 40.000 16.03 0.00 34.53 3.55
67 68 7.232910 ACTCCTAGTTAACAGAGTCTACACTT 58.767 38.462 16.03 0.00 34.53 3.16
68 69 7.391275 ACTCCTAGTTAACAGAGTCTACACTTC 59.609 40.741 16.03 0.00 34.53 3.01
69 70 7.460071 TCCTAGTTAACAGAGTCTACACTTCT 58.540 38.462 8.61 0.00 30.63 2.85
70 71 7.607223 TCCTAGTTAACAGAGTCTACACTTCTC 59.393 40.741 8.61 0.00 30.63 2.87
71 72 7.608761 CCTAGTTAACAGAGTCTACACTTCTCT 59.391 40.741 8.61 0.00 38.83 3.10
72 73 9.656040 CTAGTTAACAGAGTCTACACTTCTCTA 57.344 37.037 8.61 0.00 36.88 2.43
73 74 8.556213 AGTTAACAGAGTCTACACTTCTCTAG 57.444 38.462 8.61 0.00 36.88 2.43
74 75 8.158789 AGTTAACAGAGTCTACACTTCTCTAGT 58.841 37.037 8.61 0.00 36.88 2.57
75 76 8.785946 GTTAACAGAGTCTACACTTCTCTAGTT 58.214 37.037 0.00 0.00 36.88 2.24
77 78 7.910441 ACAGAGTCTACACTTCTCTAGTTAC 57.090 40.000 0.00 0.00 36.88 2.50
78 79 7.682628 ACAGAGTCTACACTTCTCTAGTTACT 58.317 38.462 0.00 0.00 36.88 2.24
79 80 7.604927 ACAGAGTCTACACTTCTCTAGTTACTG 59.395 40.741 0.00 0.00 36.88 2.74
80 81 7.065324 CAGAGTCTACACTTCTCTAGTTACTGG 59.935 44.444 0.00 0.00 36.88 4.00
81 82 5.648960 AGTCTACACTTCTCTAGTTACTGGC 59.351 44.000 0.00 0.00 33.85 4.85
82 83 3.851976 ACACTTCTCTAGTTACTGGCG 57.148 47.619 0.00 0.00 33.85 5.69
83 84 2.094649 ACACTTCTCTAGTTACTGGCGC 60.095 50.000 0.00 0.00 33.85 6.53
84 85 1.132643 ACTTCTCTAGTTACTGGCGCG 59.867 52.381 0.00 0.00 31.29 6.86
85 86 0.179145 TTCTCTAGTTACTGGCGCGC 60.179 55.000 25.94 25.94 0.00 6.86
86 87 1.030488 TCTCTAGTTACTGGCGCGCT 61.030 55.000 32.29 14.49 0.00 5.92
87 88 0.661552 CTCTAGTTACTGGCGCGCTA 59.338 55.000 32.29 25.70 0.00 4.26
88 89 1.267261 CTCTAGTTACTGGCGCGCTAT 59.733 52.381 32.29 18.63 0.00 2.97
89 90 1.266175 TCTAGTTACTGGCGCGCTATC 59.734 52.381 32.29 15.45 0.00 2.08
90 91 0.040692 TAGTTACTGGCGCGCTATCG 60.041 55.000 32.29 16.90 39.07 2.92
91 92 1.298863 GTTACTGGCGCGCTATCGA 60.299 57.895 32.29 10.14 38.10 3.59
92 93 0.868602 GTTACTGGCGCGCTATCGAA 60.869 55.000 32.29 15.82 38.10 3.71
93 94 0.031585 TTACTGGCGCGCTATCGAAT 59.968 50.000 32.29 11.99 38.10 3.34
94 95 0.876399 TACTGGCGCGCTATCGAATA 59.124 50.000 32.29 10.97 38.10 1.75
95 96 0.031585 ACTGGCGCGCTATCGAATAA 59.968 50.000 32.29 4.58 38.10 1.40
96 97 1.336887 ACTGGCGCGCTATCGAATAAT 60.337 47.619 32.29 1.89 38.10 1.28
97 98 1.059692 CTGGCGCGCTATCGAATAATG 59.940 52.381 32.29 5.51 38.10 1.90
98 99 1.336424 TGGCGCGCTATCGAATAATGA 60.336 47.619 32.29 0.00 38.10 2.57
99 100 1.724623 GGCGCGCTATCGAATAATGAA 59.275 47.619 32.29 0.00 38.10 2.57
100 101 2.472397 GGCGCGCTATCGAATAATGAAC 60.472 50.000 32.29 3.82 38.10 3.18
101 102 2.408704 GCGCGCTATCGAATAATGAACT 59.591 45.455 26.67 0.00 38.10 3.01
102 103 3.606777 GCGCGCTATCGAATAATGAACTA 59.393 43.478 26.67 0.00 38.10 2.24
103 104 4.265556 GCGCGCTATCGAATAATGAACTAT 59.734 41.667 26.67 0.00 38.10 2.12
104 105 5.220228 GCGCGCTATCGAATAATGAACTATT 60.220 40.000 26.67 0.00 38.10 1.73
105 106 6.669977 GCGCGCTATCGAATAATGAACTATTT 60.670 38.462 26.67 0.00 38.10 1.40
106 107 7.227461 CGCGCTATCGAATAATGAACTATTTT 58.773 34.615 5.56 0.00 38.10 1.82
107 108 7.212597 CGCGCTATCGAATAATGAACTATTTTG 59.787 37.037 5.56 0.00 38.10 2.44
108 109 8.009974 GCGCTATCGAATAATGAACTATTTTGT 58.990 33.333 0.00 0.00 38.10 2.83
109 110 9.517361 CGCTATCGAATAATGAACTATTTTGTC 57.483 33.333 0.00 0.00 38.10 3.18
110 111 9.813080 GCTATCGAATAATGAACTATTTTGTCC 57.187 33.333 0.00 0.00 0.00 4.02
125 126 9.436957 ACTATTTTGTCCTTACTAGTCAATGTG 57.563 33.333 0.00 0.00 0.00 3.21
126 127 9.436957 CTATTTTGTCCTTACTAGTCAATGTGT 57.563 33.333 0.00 0.00 0.00 3.72
128 129 8.597662 TTTTGTCCTTACTAGTCAATGTGTAC 57.402 34.615 0.00 0.00 0.00 2.90
129 130 6.904463 TGTCCTTACTAGTCAATGTGTACA 57.096 37.500 0.00 0.00 0.00 2.90
130 131 7.476540 TGTCCTTACTAGTCAATGTGTACAT 57.523 36.000 0.00 0.00 38.41 2.29
131 132 7.320399 TGTCCTTACTAGTCAATGTGTACATG 58.680 38.462 0.00 0.00 36.56 3.21
132 133 6.255887 GTCCTTACTAGTCAATGTGTACATGC 59.744 42.308 0.00 0.00 36.56 4.06
133 134 6.071051 TCCTTACTAGTCAATGTGTACATGCA 60.071 38.462 0.00 0.00 36.56 3.96
134 135 6.593770 CCTTACTAGTCAATGTGTACATGCAA 59.406 38.462 0.00 0.00 36.56 4.08
135 136 7.280876 CCTTACTAGTCAATGTGTACATGCAAT 59.719 37.037 0.00 0.00 36.56 3.56
150 151 5.512573 CATGCAATGCACGTTAATTTGAA 57.487 34.783 11.23 0.00 43.04 2.69
151 152 5.913637 CATGCAATGCACGTTAATTTGAAA 58.086 33.333 11.23 0.00 43.04 2.69
152 153 5.573296 TGCAATGCACGTTAATTTGAAAG 57.427 34.783 2.72 0.00 31.71 2.62
153 154 5.046529 TGCAATGCACGTTAATTTGAAAGT 58.953 33.333 2.72 0.00 31.71 2.66
154 155 6.209361 TGCAATGCACGTTAATTTGAAAGTA 58.791 32.000 2.72 0.00 31.71 2.24
155 156 6.865726 TGCAATGCACGTTAATTTGAAAGTAT 59.134 30.769 2.72 0.00 31.71 2.12
156 157 8.023706 TGCAATGCACGTTAATTTGAAAGTATA 58.976 29.630 2.72 0.00 31.71 1.47
157 158 9.019764 GCAATGCACGTTAATTTGAAAGTATAT 57.980 29.630 0.00 0.00 0.00 0.86
169 170 8.732413 ATTTGAAAGTATATTATGTGCATGCG 57.268 30.769 14.09 0.00 0.00 4.73
170 171 6.239908 TGAAAGTATATTATGTGCATGCGG 57.760 37.500 14.09 0.00 0.00 5.69
171 172 5.994668 TGAAAGTATATTATGTGCATGCGGA 59.005 36.000 14.09 1.46 0.00 5.54
172 173 6.654582 TGAAAGTATATTATGTGCATGCGGAT 59.345 34.615 14.09 9.77 0.00 4.18
173 174 7.821846 TGAAAGTATATTATGTGCATGCGGATA 59.178 33.333 14.09 8.72 0.00 2.59
174 175 8.737168 AAAGTATATTATGTGCATGCGGATAT 57.263 30.769 14.09 13.06 0.00 1.63
175 176 8.737168 AAGTATATTATGTGCATGCGGATATT 57.263 30.769 14.09 10.07 0.00 1.28
176 177 9.830975 AAGTATATTATGTGCATGCGGATATTA 57.169 29.630 14.09 11.73 0.00 0.98
177 178 9.830975 AGTATATTATGTGCATGCGGATATTAA 57.169 29.630 14.09 5.62 0.00 1.40
179 180 8.737168 ATATTATGTGCATGCGGATATTAAGT 57.263 30.769 14.09 0.00 0.00 2.24
180 181 9.830975 ATATTATGTGCATGCGGATATTAAGTA 57.169 29.630 14.09 0.00 0.00 2.24
181 182 5.862924 ATGTGCATGCGGATATTAAGTAC 57.137 39.130 14.09 1.16 0.00 2.73
182 183 4.698575 TGTGCATGCGGATATTAAGTACA 58.301 39.130 14.09 4.04 0.00 2.90
183 184 5.119694 TGTGCATGCGGATATTAAGTACAA 58.880 37.500 14.09 0.00 0.00 2.41
184 185 5.762711 TGTGCATGCGGATATTAAGTACAAT 59.237 36.000 14.09 0.00 0.00 2.71
185 186 6.931840 TGTGCATGCGGATATTAAGTACAATA 59.068 34.615 14.09 0.00 0.00 1.90
186 187 7.606073 TGTGCATGCGGATATTAAGTACAATAT 59.394 33.333 14.09 0.00 34.51 1.28
187 188 8.450964 GTGCATGCGGATATTAAGTACAATATT 58.549 33.333 14.09 0.00 32.47 1.28
188 189 9.660180 TGCATGCGGATATTAAGTACAATATTA 57.340 29.630 14.09 0.00 32.47 0.98
212 213 9.658475 TTATTTGCGTGTTATTATGTGATTAGC 57.342 29.630 0.00 0.00 0.00 3.09
213 214 5.323360 TGCGTGTTATTATGTGATTAGCG 57.677 39.130 0.00 0.00 0.00 4.26
214 215 4.141680 GCGTGTTATTATGTGATTAGCGC 58.858 43.478 0.00 0.00 0.00 5.92
215 216 4.084537 GCGTGTTATTATGTGATTAGCGCT 60.085 41.667 17.26 17.26 37.47 5.92
216 217 5.118050 GCGTGTTATTATGTGATTAGCGCTA 59.882 40.000 14.45 14.45 37.47 4.26
217 218 6.183360 GCGTGTTATTATGTGATTAGCGCTAT 60.183 38.462 19.60 8.53 37.47 2.97
218 219 7.008901 GCGTGTTATTATGTGATTAGCGCTATA 59.991 37.037 19.60 9.77 37.47 1.31
219 220 9.020813 CGTGTTATTATGTGATTAGCGCTATAT 57.979 33.333 19.60 14.18 0.00 0.86
225 226 8.825667 TTATGTGATTAGCGCTATATTTGACA 57.174 30.769 19.60 13.72 0.00 3.58
226 227 7.912056 ATGTGATTAGCGCTATATTTGACAT 57.088 32.000 19.60 15.23 0.00 3.06
227 228 7.120789 TGTGATTAGCGCTATATTTGACATG 57.879 36.000 19.60 0.00 0.00 3.21
228 229 6.928492 TGTGATTAGCGCTATATTTGACATGA 59.072 34.615 19.60 0.00 0.00 3.07
229 230 7.440856 TGTGATTAGCGCTATATTTGACATGAA 59.559 33.333 19.60 0.00 0.00 2.57
230 231 8.282592 GTGATTAGCGCTATATTTGACATGAAA 58.717 33.333 19.60 0.00 0.00 2.69
231 232 9.002600 TGATTAGCGCTATATTTGACATGAAAT 57.997 29.630 19.60 4.90 0.00 2.17
232 233 9.831737 GATTAGCGCTATATTTGACATGAAATT 57.168 29.630 19.60 0.00 0.00 1.82
236 237 8.840321 AGCGCTATATTTGACATGAAATTAACT 58.160 29.630 8.99 0.00 0.00 2.24
237 238 8.895845 GCGCTATATTTGACATGAAATTAACTG 58.104 33.333 0.00 0.00 0.00 3.16
238 239 8.895845 CGCTATATTTGACATGAAATTAACTGC 58.104 33.333 0.00 0.00 0.00 4.40
239 240 9.734620 GCTATATTTGACATGAAATTAACTGCA 57.265 29.630 0.00 0.00 0.00 4.41
241 242 6.932901 ATTTGACATGAAATTAACTGCACG 57.067 33.333 0.00 0.00 0.00 5.34
242 243 3.820689 TGACATGAAATTAACTGCACGC 58.179 40.909 0.00 0.00 0.00 5.34
243 244 3.501828 TGACATGAAATTAACTGCACGCT 59.498 39.130 0.00 0.00 0.00 5.07
244 245 4.693095 TGACATGAAATTAACTGCACGCTA 59.307 37.500 0.00 0.00 0.00 4.26
245 246 5.180304 TGACATGAAATTAACTGCACGCTAA 59.820 36.000 0.00 0.00 0.00 3.09
246 247 6.007936 ACATGAAATTAACTGCACGCTAAA 57.992 33.333 0.00 0.00 0.00 1.85
247 248 5.856455 ACATGAAATTAACTGCACGCTAAAC 59.144 36.000 0.00 0.00 0.00 2.01
258 259 3.929095 CGCTAAACGTGTTGAGAGC 57.071 52.632 1.11 3.46 36.87 4.09
259 260 1.419374 CGCTAAACGTGTTGAGAGCT 58.581 50.000 1.11 0.00 36.87 4.09
260 261 1.387084 CGCTAAACGTGTTGAGAGCTC 59.613 52.381 5.27 5.27 36.87 4.09
261 262 1.387084 GCTAAACGTGTTGAGAGCTCG 59.613 52.381 8.37 0.00 0.00 5.03
262 263 1.986378 CTAAACGTGTTGAGAGCTCGG 59.014 52.381 8.37 0.00 0.00 4.63
263 264 1.222115 AAACGTGTTGAGAGCTCGGC 61.222 55.000 8.37 5.34 0.00 5.54
264 265 2.049156 CGTGTTGAGAGCTCGGCA 60.049 61.111 8.37 8.18 0.00 5.69
265 266 2.375766 CGTGTTGAGAGCTCGGCAC 61.376 63.158 8.37 14.03 35.23 5.01
266 267 1.005630 GTGTTGAGAGCTCGGCACT 60.006 57.895 8.37 0.00 35.49 4.40
267 268 1.005748 TGTTGAGAGCTCGGCACTG 60.006 57.895 8.37 0.00 28.14 3.66
268 269 1.290324 GTTGAGAGCTCGGCACTGA 59.710 57.895 8.37 0.00 28.14 3.41
269 270 0.319900 GTTGAGAGCTCGGCACTGAA 60.320 55.000 8.37 0.00 28.14 3.02
270 271 0.037882 TTGAGAGCTCGGCACTGAAG 60.038 55.000 8.37 0.00 28.14 3.02
271 272 1.809209 GAGAGCTCGGCACTGAAGC 60.809 63.158 8.37 0.00 28.14 3.86
272 273 2.224495 GAGAGCTCGGCACTGAAGCT 62.224 60.000 8.37 0.00 38.68 3.74
273 274 2.047465 AGCTCGGCACTGAAGCTG 60.047 61.111 0.00 0.00 42.28 4.24
274 275 2.358003 GCTCGGCACTGAAGCTGT 60.358 61.111 0.00 0.00 41.63 4.40
275 276 1.963338 GCTCGGCACTGAAGCTGTT 60.963 57.895 0.00 0.00 41.63 3.16
276 277 1.510480 GCTCGGCACTGAAGCTGTTT 61.510 55.000 0.00 0.00 41.63 2.83
277 278 1.795768 CTCGGCACTGAAGCTGTTTA 58.204 50.000 0.00 0.00 41.63 2.01
278 279 1.728971 CTCGGCACTGAAGCTGTTTAG 59.271 52.381 0.00 0.00 41.63 1.85
279 280 0.798776 CGGCACTGAAGCTGTTTAGG 59.201 55.000 0.00 0.00 36.15 2.69
280 281 1.878102 CGGCACTGAAGCTGTTTAGGT 60.878 52.381 0.00 0.00 36.15 3.08
281 282 1.807142 GGCACTGAAGCTGTTTAGGTC 59.193 52.381 0.00 0.00 32.44 3.85
282 283 1.461127 GCACTGAAGCTGTTTAGGTCG 59.539 52.381 0.00 0.00 32.44 4.79
283 284 2.755650 CACTGAAGCTGTTTAGGTCGT 58.244 47.619 0.00 0.00 32.44 4.34
284 285 3.131396 CACTGAAGCTGTTTAGGTCGTT 58.869 45.455 0.00 0.00 32.44 3.85
285 286 3.184581 CACTGAAGCTGTTTAGGTCGTTC 59.815 47.826 0.00 0.00 32.44 3.95
286 287 2.400399 TGAAGCTGTTTAGGTCGTTCG 58.600 47.619 0.00 0.00 32.44 3.95
287 288 2.034939 TGAAGCTGTTTAGGTCGTTCGA 59.965 45.455 0.00 0.00 32.44 3.71
288 289 3.251571 GAAGCTGTTTAGGTCGTTCGAT 58.748 45.455 0.00 0.00 32.44 3.59
289 290 3.314541 AGCTGTTTAGGTCGTTCGATT 57.685 42.857 0.00 0.00 0.00 3.34
290 291 2.993899 AGCTGTTTAGGTCGTTCGATTG 59.006 45.455 0.00 0.00 0.00 2.67
291 292 2.991190 GCTGTTTAGGTCGTTCGATTGA 59.009 45.455 0.00 0.00 0.00 2.57
292 293 3.181533 GCTGTTTAGGTCGTTCGATTGAC 60.182 47.826 8.60 8.60 0.00 3.18
293 294 3.979948 TGTTTAGGTCGTTCGATTGACA 58.020 40.909 16.47 0.00 36.83 3.58
294 295 4.562082 TGTTTAGGTCGTTCGATTGACAT 58.438 39.130 16.47 12.96 36.83 3.06
295 296 4.387559 TGTTTAGGTCGTTCGATTGACATG 59.612 41.667 16.47 0.00 36.83 3.21
296 297 4.443913 TTAGGTCGTTCGATTGACATGA 57.556 40.909 16.47 6.31 36.83 3.07
297 298 3.526931 AGGTCGTTCGATTGACATGAT 57.473 42.857 16.47 0.00 36.83 2.45
298 299 3.861840 AGGTCGTTCGATTGACATGATT 58.138 40.909 16.47 0.00 36.83 2.57
299 300 4.253685 AGGTCGTTCGATTGACATGATTT 58.746 39.130 16.47 0.00 36.83 2.17
300 301 5.416083 AGGTCGTTCGATTGACATGATTTA 58.584 37.500 16.47 0.00 36.83 1.40
301 302 5.872617 AGGTCGTTCGATTGACATGATTTAA 59.127 36.000 16.47 0.00 36.83 1.52
302 303 6.538742 AGGTCGTTCGATTGACATGATTTAAT 59.461 34.615 16.47 0.00 36.83 1.40
303 304 6.628856 GGTCGTTCGATTGACATGATTTAATG 59.371 38.462 16.47 0.00 36.83 1.90
304 305 6.628856 GTCGTTCGATTGACATGATTTAATGG 59.371 38.462 0.00 0.00 35.20 3.16
305 306 5.396362 CGTTCGATTGACATGATTTAATGGC 59.604 40.000 0.00 0.00 36.00 4.40
306 307 5.437289 TCGATTGACATGATTTAATGGCC 57.563 39.130 0.00 0.00 34.38 5.36
307 308 4.024133 TCGATTGACATGATTTAATGGCCG 60.024 41.667 0.00 0.00 34.38 6.13
308 309 4.024133 CGATTGACATGATTTAATGGCCGA 60.024 41.667 0.00 0.00 34.38 5.54
309 310 4.898829 TTGACATGATTTAATGGCCGAG 57.101 40.909 0.00 0.00 34.38 4.63
310 311 4.149511 TGACATGATTTAATGGCCGAGA 57.850 40.909 0.00 0.00 34.38 4.04
311 312 4.717877 TGACATGATTTAATGGCCGAGAT 58.282 39.130 0.00 0.00 34.38 2.75
312 313 5.132502 TGACATGATTTAATGGCCGAGATT 58.867 37.500 0.00 0.00 34.38 2.40
313 314 6.295249 TGACATGATTTAATGGCCGAGATTA 58.705 36.000 0.00 0.00 34.38 1.75
314 315 6.770303 TGACATGATTTAATGGCCGAGATTAA 59.230 34.615 0.00 0.00 34.38 1.40
315 316 7.448161 TGACATGATTTAATGGCCGAGATTAAT 59.552 33.333 0.00 0.00 34.38 1.40
316 317 8.181904 ACATGATTTAATGGCCGAGATTAATT 57.818 30.769 0.00 4.90 31.46 1.40
317 318 8.084073 ACATGATTTAATGGCCGAGATTAATTG 58.916 33.333 0.00 6.48 31.46 2.32
318 319 6.980593 TGATTTAATGGCCGAGATTAATTGG 58.019 36.000 7.39 0.00 0.00 3.16
319 320 6.775142 TGATTTAATGGCCGAGATTAATTGGA 59.225 34.615 7.39 0.00 0.00 3.53
320 321 7.451255 TGATTTAATGGCCGAGATTAATTGGAT 59.549 33.333 7.39 0.05 0.00 3.41
321 322 6.817765 TTAATGGCCGAGATTAATTGGATC 57.182 37.500 0.00 0.00 0.00 3.36
322 323 4.647564 ATGGCCGAGATTAATTGGATCT 57.352 40.909 0.00 6.01 36.60 2.75
323 324 3.743521 TGGCCGAGATTAATTGGATCTG 58.256 45.455 9.96 4.52 34.13 2.90
324 325 3.136443 TGGCCGAGATTAATTGGATCTGT 59.864 43.478 9.96 0.00 34.13 3.41
325 326 3.748568 GGCCGAGATTAATTGGATCTGTC 59.251 47.826 9.96 0.00 34.13 3.51
326 327 3.748568 GCCGAGATTAATTGGATCTGTCC 59.251 47.826 9.96 0.00 45.31 4.02
327 328 4.319177 CCGAGATTAATTGGATCTGTCCC 58.681 47.826 9.96 0.00 44.41 4.46
328 329 4.040952 CCGAGATTAATTGGATCTGTCCCT 59.959 45.833 9.96 0.00 44.41 4.20
329 330 5.455326 CCGAGATTAATTGGATCTGTCCCTT 60.455 44.000 9.96 0.00 44.41 3.95
330 331 6.058183 CGAGATTAATTGGATCTGTCCCTTT 58.942 40.000 9.96 0.00 44.41 3.11
331 332 6.017605 CGAGATTAATTGGATCTGTCCCTTTG 60.018 42.308 9.96 0.00 44.41 2.77
332 333 6.131961 AGATTAATTGGATCTGTCCCTTTGG 58.868 40.000 5.62 0.00 44.41 3.28
333 334 2.834638 ATTGGATCTGTCCCTTTGGG 57.165 50.000 0.00 0.00 44.41 4.12
334 335 1.455822 TTGGATCTGTCCCTTTGGGT 58.544 50.000 2.25 0.00 44.74 4.51
335 336 0.991920 TGGATCTGTCCCTTTGGGTC 59.008 55.000 2.25 0.00 44.74 4.46
336 337 1.290134 GGATCTGTCCCTTTGGGTCT 58.710 55.000 2.25 0.00 44.74 3.85
337 338 1.636003 GGATCTGTCCCTTTGGGTCTT 59.364 52.381 2.25 0.00 44.74 3.01
338 339 2.041755 GGATCTGTCCCTTTGGGTCTTT 59.958 50.000 2.25 0.00 44.74 2.52
339 340 3.500471 GGATCTGTCCCTTTGGGTCTTTT 60.500 47.826 2.25 0.00 44.74 2.27
340 341 3.680777 TCTGTCCCTTTGGGTCTTTTT 57.319 42.857 2.25 0.00 44.74 1.94
341 342 4.799715 TCTGTCCCTTTGGGTCTTTTTA 57.200 40.909 2.25 0.00 44.74 1.52
342 343 5.333566 TCTGTCCCTTTGGGTCTTTTTAT 57.666 39.130 2.25 0.00 44.74 1.40
343 344 6.457159 TCTGTCCCTTTGGGTCTTTTTATA 57.543 37.500 2.25 0.00 44.74 0.98
344 345 7.039722 TCTGTCCCTTTGGGTCTTTTTATAT 57.960 36.000 2.25 0.00 44.74 0.86
345 346 7.475299 TCTGTCCCTTTGGGTCTTTTTATATT 58.525 34.615 2.25 0.00 44.74 1.28
346 347 7.396055 TCTGTCCCTTTGGGTCTTTTTATATTG 59.604 37.037 2.25 0.00 44.74 1.90
347 348 6.439058 TGTCCCTTTGGGTCTTTTTATATTGG 59.561 38.462 2.25 0.00 44.74 3.16
348 349 6.439375 GTCCCTTTGGGTCTTTTTATATTGGT 59.561 38.462 2.25 0.00 44.74 3.67
349 350 7.616542 GTCCCTTTGGGTCTTTTTATATTGGTA 59.383 37.037 2.25 0.00 44.74 3.25
350 351 8.348354 TCCCTTTGGGTCTTTTTATATTGGTAT 58.652 33.333 2.25 0.00 44.74 2.73
351 352 9.649316 CCCTTTGGGTCTTTTTATATTGGTATA 57.351 33.333 0.00 0.00 38.25 1.47
406 407 7.964666 TGTTAATATTGTTTTAGGAAGGGGG 57.035 36.000 0.00 0.00 0.00 5.40
407 408 7.710579 TGTTAATATTGTTTTAGGAAGGGGGA 58.289 34.615 0.00 0.00 0.00 4.81
408 409 8.178132 TGTTAATATTGTTTTAGGAAGGGGGAA 58.822 33.333 0.00 0.00 0.00 3.97
409 410 9.209048 GTTAATATTGTTTTAGGAAGGGGGAAT 57.791 33.333 0.00 0.00 0.00 3.01
410 411 7.914427 AATATTGTTTTAGGAAGGGGGAATC 57.086 36.000 0.00 0.00 0.00 2.52
411 412 4.750833 TTGTTTTAGGAAGGGGGAATCA 57.249 40.909 0.00 0.00 0.00 2.57
412 413 4.750833 TGTTTTAGGAAGGGGGAATCAA 57.249 40.909 0.00 0.00 0.00 2.57
413 414 5.081315 TGTTTTAGGAAGGGGGAATCAAA 57.919 39.130 0.00 0.00 0.00 2.69
414 415 5.660533 TGTTTTAGGAAGGGGGAATCAAAT 58.339 37.500 0.00 0.00 0.00 2.32
415 416 5.483583 TGTTTTAGGAAGGGGGAATCAAATG 59.516 40.000 0.00 0.00 0.00 2.32
416 417 2.165357 AGGAAGGGGGAATCAAATGC 57.835 50.000 0.00 0.00 0.00 3.56
417 418 1.362237 AGGAAGGGGGAATCAAATGCA 59.638 47.619 0.00 0.00 0.00 3.96
418 419 2.187100 GGAAGGGGGAATCAAATGCAA 58.813 47.619 0.00 0.00 0.00 4.08
419 420 2.571202 GGAAGGGGGAATCAAATGCAAA 59.429 45.455 0.00 0.00 0.00 3.68
420 421 3.008923 GGAAGGGGGAATCAAATGCAAAA 59.991 43.478 0.00 0.00 0.00 2.44
421 422 3.986996 AGGGGGAATCAAATGCAAAAG 57.013 42.857 0.00 0.00 0.00 2.27
422 423 2.573009 AGGGGGAATCAAATGCAAAAGG 59.427 45.455 0.00 0.00 0.00 3.11
423 424 2.358957 GGGGAATCAAATGCAAAAGGC 58.641 47.619 0.00 0.00 45.13 4.35
432 433 3.133946 GCAAAAGGCGGAAACCCA 58.866 55.556 0.00 0.00 0.00 4.51
433 434 1.006220 GCAAAAGGCGGAAACCCAG 60.006 57.895 0.00 0.00 0.00 4.45
434 435 1.006220 CAAAAGGCGGAAACCCAGC 60.006 57.895 0.00 0.00 0.00 4.85
439 440 4.344865 GCGGAAACCCAGCCAGGA 62.345 66.667 0.00 0.00 41.22 3.86
440 441 2.359975 CGGAAACCCAGCCAGGAC 60.360 66.667 0.00 0.00 41.22 3.85
441 442 2.895424 CGGAAACCCAGCCAGGACT 61.895 63.158 0.00 0.00 41.22 3.85
442 443 1.550130 CGGAAACCCAGCCAGGACTA 61.550 60.000 0.00 0.00 41.22 2.59
443 444 0.253327 GGAAACCCAGCCAGGACTAG 59.747 60.000 0.00 0.00 41.22 2.57
444 445 1.276622 GAAACCCAGCCAGGACTAGA 58.723 55.000 0.00 0.00 41.22 2.43
445 446 1.208293 GAAACCCAGCCAGGACTAGAG 59.792 57.143 0.00 0.00 41.22 2.43
446 447 0.618968 AACCCAGCCAGGACTAGAGG 60.619 60.000 0.00 0.00 41.22 3.69
450 451 4.228567 GCCAGGACTAGAGGCGGC 62.229 72.222 0.00 0.00 38.86 6.53
451 452 2.759973 CCAGGACTAGAGGCGGCA 60.760 66.667 13.08 0.00 0.00 5.69
452 453 2.136878 CCAGGACTAGAGGCGGCAT 61.137 63.158 13.08 1.06 0.00 4.40
453 454 0.827925 CCAGGACTAGAGGCGGCATA 60.828 60.000 13.08 2.42 0.00 3.14
454 455 1.040646 CAGGACTAGAGGCGGCATAA 58.959 55.000 13.08 0.00 0.00 1.90
455 456 1.000283 CAGGACTAGAGGCGGCATAAG 60.000 57.143 13.08 7.35 0.00 1.73
456 457 1.133450 AGGACTAGAGGCGGCATAAGA 60.133 52.381 13.08 0.00 0.00 2.10
457 458 1.687123 GGACTAGAGGCGGCATAAGAA 59.313 52.381 13.08 0.00 0.00 2.52
458 459 2.546162 GGACTAGAGGCGGCATAAGAAC 60.546 54.545 13.08 5.11 0.00 3.01
459 460 2.100916 GACTAGAGGCGGCATAAGAACA 59.899 50.000 13.08 0.00 0.00 3.18
460 461 2.101582 ACTAGAGGCGGCATAAGAACAG 59.898 50.000 13.08 0.00 0.00 3.16
461 462 1.195115 AGAGGCGGCATAAGAACAGA 58.805 50.000 13.08 0.00 0.00 3.41
462 463 1.555075 AGAGGCGGCATAAGAACAGAA 59.445 47.619 13.08 0.00 0.00 3.02
463 464 2.027192 AGAGGCGGCATAAGAACAGAAA 60.027 45.455 13.08 0.00 0.00 2.52
464 465 2.084546 AGGCGGCATAAGAACAGAAAC 58.915 47.619 13.08 0.00 0.00 2.78
465 466 1.202031 GGCGGCATAAGAACAGAAACG 60.202 52.381 3.07 0.00 0.00 3.60
466 467 1.730064 GCGGCATAAGAACAGAAACGA 59.270 47.619 0.00 0.00 0.00 3.85
467 468 2.474032 GCGGCATAAGAACAGAAACGAC 60.474 50.000 0.00 0.00 0.00 4.34
468 469 2.993899 CGGCATAAGAACAGAAACGACT 59.006 45.455 0.00 0.00 0.00 4.18
469 470 4.171005 CGGCATAAGAACAGAAACGACTA 58.829 43.478 0.00 0.00 0.00 2.59
470 471 4.031426 CGGCATAAGAACAGAAACGACTAC 59.969 45.833 0.00 0.00 0.00 2.73
471 472 5.169295 GGCATAAGAACAGAAACGACTACT 58.831 41.667 0.00 0.00 0.00 2.57
472 473 5.062308 GGCATAAGAACAGAAACGACTACTG 59.938 44.000 0.00 0.00 37.62 2.74
473 474 5.862323 GCATAAGAACAGAAACGACTACTGA 59.138 40.000 0.00 0.00 35.85 3.41
474 475 6.365247 GCATAAGAACAGAAACGACTACTGAA 59.635 38.462 0.00 0.00 35.85 3.02
475 476 7.063544 GCATAAGAACAGAAACGACTACTGAAT 59.936 37.037 0.00 0.00 35.85 2.57
476 477 8.587950 CATAAGAACAGAAACGACTACTGAATC 58.412 37.037 0.00 0.00 35.85 2.52
477 478 6.085555 AGAACAGAAACGACTACTGAATCA 57.914 37.500 0.00 0.00 35.85 2.57
478 479 6.692486 AGAACAGAAACGACTACTGAATCAT 58.308 36.000 0.00 0.00 35.85 2.45
479 480 6.809196 AGAACAGAAACGACTACTGAATCATC 59.191 38.462 0.00 0.00 35.85 2.92
480 481 6.025749 ACAGAAACGACTACTGAATCATCA 57.974 37.500 0.00 0.00 35.85 3.07
481 482 6.455647 ACAGAAACGACTACTGAATCATCAA 58.544 36.000 0.00 0.00 34.49 2.57
482 483 6.366332 ACAGAAACGACTACTGAATCATCAAC 59.634 38.462 0.00 0.00 34.49 3.18
483 484 6.366061 CAGAAACGACTACTGAATCATCAACA 59.634 38.462 0.00 0.00 34.49 3.33
484 485 6.587990 AGAAACGACTACTGAATCATCAACAG 59.412 38.462 0.00 0.00 34.49 3.16
485 486 4.177026 ACGACTACTGAATCATCAACAGC 58.823 43.478 0.00 0.00 34.49 4.40
486 487 4.176271 CGACTACTGAATCATCAACAGCA 58.824 43.478 0.00 0.00 34.49 4.41
487 488 4.267214 CGACTACTGAATCATCAACAGCAG 59.733 45.833 0.00 0.00 34.49 4.24
488 489 5.411831 ACTACTGAATCATCAACAGCAGA 57.588 39.130 0.00 0.00 34.49 4.26
489 490 5.798132 ACTACTGAATCATCAACAGCAGAA 58.202 37.500 0.00 0.00 34.49 3.02
490 491 6.233434 ACTACTGAATCATCAACAGCAGAAA 58.767 36.000 0.00 0.00 34.49 2.52
491 492 6.712095 ACTACTGAATCATCAACAGCAGAAAA 59.288 34.615 0.00 0.00 34.49 2.29
492 493 6.010294 ACTGAATCATCAACAGCAGAAAAG 57.990 37.500 0.00 0.00 34.49 2.27
493 494 5.766670 ACTGAATCATCAACAGCAGAAAAGA 59.233 36.000 0.00 0.00 34.49 2.52
494 495 6.072618 ACTGAATCATCAACAGCAGAAAAGAG 60.073 38.462 0.00 0.00 34.49 2.85
495 496 5.999600 TGAATCATCAACAGCAGAAAAGAGA 59.000 36.000 0.00 0.00 30.99 3.10
496 497 5.876612 ATCATCAACAGCAGAAAAGAGAC 57.123 39.130 0.00 0.00 0.00 3.36
497 498 3.742882 TCATCAACAGCAGAAAAGAGACG 59.257 43.478 0.00 0.00 0.00 4.18
498 499 3.452755 TCAACAGCAGAAAAGAGACGA 57.547 42.857 0.00 0.00 0.00 4.20
499 500 3.995199 TCAACAGCAGAAAAGAGACGAT 58.005 40.909 0.00 0.00 0.00 3.73
500 501 5.134202 TCAACAGCAGAAAAGAGACGATA 57.866 39.130 0.00 0.00 0.00 2.92
501 502 5.164233 TCAACAGCAGAAAAGAGACGATAG 58.836 41.667 0.00 0.00 46.19 2.08
502 503 5.048013 TCAACAGCAGAAAAGAGACGATAGA 60.048 40.000 0.00 0.00 41.38 1.98
503 504 5.392767 ACAGCAGAAAAGAGACGATAGAA 57.607 39.130 0.00 0.00 41.38 2.10
504 505 5.784177 ACAGCAGAAAAGAGACGATAGAAA 58.216 37.500 0.00 0.00 41.38 2.52
505 506 6.223852 ACAGCAGAAAAGAGACGATAGAAAA 58.776 36.000 0.00 0.00 41.38 2.29
506 507 6.367422 ACAGCAGAAAAGAGACGATAGAAAAG 59.633 38.462 0.00 0.00 41.38 2.27
507 508 5.350091 AGCAGAAAAGAGACGATAGAAAAGC 59.650 40.000 0.00 0.00 41.38 3.51
508 509 5.120830 GCAGAAAAGAGACGATAGAAAAGCA 59.879 40.000 0.00 0.00 41.38 3.91
509 510 6.671879 GCAGAAAAGAGACGATAGAAAAGCAG 60.672 42.308 0.00 0.00 41.38 4.24
510 511 6.367422 CAGAAAAGAGACGATAGAAAAGCAGT 59.633 38.462 0.00 0.00 41.38 4.40
511 512 6.931840 AGAAAAGAGACGATAGAAAAGCAGTT 59.068 34.615 0.00 0.00 41.38 3.16
512 513 6.473397 AAAGAGACGATAGAAAAGCAGTTG 57.527 37.500 0.00 0.00 41.38 3.16
513 514 3.929610 AGAGACGATAGAAAAGCAGTTGC 59.070 43.478 0.00 0.00 40.12 4.17
515 516 3.681897 AGACGATAGAAAAGCAGTTGCTG 59.318 43.478 7.49 0.00 46.38 4.41
516 517 3.664107 ACGATAGAAAAGCAGTTGCTGA 58.336 40.909 7.49 0.00 46.38 4.26
517 518 4.256920 ACGATAGAAAAGCAGTTGCTGAT 58.743 39.130 7.49 0.00 46.38 2.90
518 519 4.697352 ACGATAGAAAAGCAGTTGCTGATT 59.303 37.500 7.49 6.28 46.38 2.57
519 520 5.874810 ACGATAGAAAAGCAGTTGCTGATTA 59.125 36.000 7.49 0.00 46.38 1.75
520 521 6.371548 ACGATAGAAAAGCAGTTGCTGATTAA 59.628 34.615 7.49 0.00 46.38 1.40
521 522 7.094805 ACGATAGAAAAGCAGTTGCTGATTAAA 60.095 33.333 7.49 0.00 46.38 1.52
522 523 7.750458 CGATAGAAAAGCAGTTGCTGATTAAAA 59.250 33.333 7.49 0.00 46.83 1.52
529 530 6.934561 GCAGTTGCTGATTAAAAGGTTTAG 57.065 37.500 0.00 0.00 38.21 1.85
530 531 6.447162 GCAGTTGCTGATTAAAAGGTTTAGT 58.553 36.000 0.00 0.00 38.21 2.24
531 532 6.363357 GCAGTTGCTGATTAAAAGGTTTAGTG 59.637 38.462 0.00 0.00 38.21 2.74
532 533 7.425606 CAGTTGCTGATTAAAAGGTTTAGTGT 58.574 34.615 0.00 0.00 32.44 3.55
533 534 7.591426 CAGTTGCTGATTAAAAGGTTTAGTGTC 59.409 37.037 0.00 0.00 32.44 3.67
534 535 7.502561 AGTTGCTGATTAAAAGGTTTAGTGTCT 59.497 33.333 0.00 0.00 0.00 3.41
535 536 7.817418 TGCTGATTAAAAGGTTTAGTGTCTT 57.183 32.000 0.00 0.00 0.00 3.01
536 537 7.648142 TGCTGATTAAAAGGTTTAGTGTCTTG 58.352 34.615 0.00 0.00 0.00 3.02
537 538 7.084486 GCTGATTAAAAGGTTTAGTGTCTTGG 58.916 38.462 0.00 0.00 0.00 3.61
538 539 7.040686 GCTGATTAAAAGGTTTAGTGTCTTGGA 60.041 37.037 0.00 0.00 0.00 3.53
539 540 8.754991 TGATTAAAAGGTTTAGTGTCTTGGAA 57.245 30.769 0.00 0.00 0.00 3.53
540 541 9.191479 TGATTAAAAGGTTTAGTGTCTTGGAAA 57.809 29.630 0.00 0.00 0.00 3.13
542 543 9.981114 ATTAAAAGGTTTAGTGTCTTGGAAATG 57.019 29.630 0.00 0.00 0.00 2.32
543 544 5.453567 AAGGTTTAGTGTCTTGGAAATGC 57.546 39.130 0.00 0.00 0.00 3.56
544 545 4.469657 AGGTTTAGTGTCTTGGAAATGCA 58.530 39.130 0.00 0.00 0.00 3.96
545 546 5.079643 AGGTTTAGTGTCTTGGAAATGCAT 58.920 37.500 0.00 0.00 0.00 3.96
546 547 5.047802 AGGTTTAGTGTCTTGGAAATGCATG 60.048 40.000 0.00 0.00 0.00 4.06
547 548 4.439305 TTAGTGTCTTGGAAATGCATGC 57.561 40.909 11.82 11.82 0.00 4.06
548 549 2.522185 AGTGTCTTGGAAATGCATGCT 58.478 42.857 20.33 0.00 0.00 3.79
549 550 2.895404 AGTGTCTTGGAAATGCATGCTT 59.105 40.909 20.33 10.16 0.00 3.91
550 551 2.991190 GTGTCTTGGAAATGCATGCTTG 59.009 45.455 20.33 0.00 0.00 4.01
551 552 2.028839 TGTCTTGGAAATGCATGCTTGG 60.029 45.455 20.33 0.94 0.00 3.61
552 553 1.066716 TCTTGGAAATGCATGCTTGGC 60.067 47.619 20.33 8.19 0.00 4.52
553 554 0.978151 TTGGAAATGCATGCTTGGCT 59.022 45.000 20.33 0.98 0.00 4.75
554 555 0.248012 TGGAAATGCATGCTTGGCTG 59.752 50.000 20.33 0.00 0.00 4.85
555 556 0.533491 GGAAATGCATGCTTGGCTGA 59.467 50.000 20.33 0.00 0.00 4.26
556 557 1.470979 GGAAATGCATGCTTGGCTGAG 60.471 52.381 20.33 0.00 0.00 3.35
557 558 1.475280 GAAATGCATGCTTGGCTGAGA 59.525 47.619 20.33 0.00 0.00 3.27
558 559 1.552578 AATGCATGCTTGGCTGAGAA 58.447 45.000 20.33 0.00 0.00 2.87
559 560 1.552578 ATGCATGCTTGGCTGAGAAA 58.447 45.000 20.33 0.00 0.00 2.52
606 607 5.580297 ACGTTTTTGATGTGAATTTGCTTGT 59.420 32.000 0.00 0.00 0.00 3.16
614 615 1.403323 TGAATTTGCTTGTGTGCGACA 59.597 42.857 0.00 0.00 35.36 4.35
934 935 3.951037 AGTGATGTCTAGCTCGACTTCAT 59.049 43.478 28.29 18.81 44.55 2.57
1046 1047 2.827921 GTGTGAGGGAAGAAAATGGCAT 59.172 45.455 0.00 0.00 0.00 4.40
2171 2179 0.981183 ATTGAGGTGTAGCAACCCGA 59.019 50.000 0.02 0.00 41.54 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.479027 TGTGCTTAGAGAGTATTGTACCACA 59.521 40.000 0.00 0.00 0.00 4.17
2 3 5.962433 TGTGCTTAGAGAGTATTGTACCAC 58.038 41.667 0.00 0.00 0.00 4.16
4 5 7.900782 TTTTGTGCTTAGAGAGTATTGTACC 57.099 36.000 0.00 0.00 0.00 3.34
5 6 9.760660 CAATTTTGTGCTTAGAGAGTATTGTAC 57.239 33.333 0.00 0.00 0.00 2.90
6 7 9.719355 TCAATTTTGTGCTTAGAGAGTATTGTA 57.281 29.630 0.00 0.00 0.00 2.41
7 8 8.621532 TCAATTTTGTGCTTAGAGAGTATTGT 57.378 30.769 0.00 0.00 0.00 2.71
8 9 7.695618 GCTCAATTTTGTGCTTAGAGAGTATTG 59.304 37.037 9.45 0.00 42.56 1.90
9 10 7.391554 TGCTCAATTTTGTGCTTAGAGAGTATT 59.608 33.333 15.76 0.00 45.17 1.89
10 11 6.881065 TGCTCAATTTTGTGCTTAGAGAGTAT 59.119 34.615 15.76 0.00 45.17 2.12
11 12 6.230472 TGCTCAATTTTGTGCTTAGAGAGTA 58.770 36.000 15.76 0.00 45.17 2.59
12 13 5.065914 TGCTCAATTTTGTGCTTAGAGAGT 58.934 37.500 15.76 0.00 45.17 3.24
13 14 5.391736 CCTGCTCAATTTTGTGCTTAGAGAG 60.392 44.000 15.76 6.18 45.17 3.20
14 15 4.456911 CCTGCTCAATTTTGTGCTTAGAGA 59.543 41.667 15.76 0.00 45.17 3.10
15 16 4.217118 ACCTGCTCAATTTTGTGCTTAGAG 59.783 41.667 15.76 7.01 45.17 2.43
16 17 4.144297 ACCTGCTCAATTTTGTGCTTAGA 58.856 39.130 15.76 0.00 45.17 2.10
17 18 4.479619 GACCTGCTCAATTTTGTGCTTAG 58.520 43.478 15.76 7.84 45.17 2.18
18 19 3.255642 GGACCTGCTCAATTTTGTGCTTA 59.744 43.478 15.76 0.00 45.17 3.09
19 20 2.036346 GGACCTGCTCAATTTTGTGCTT 59.964 45.455 15.76 3.65 45.17 3.91
20 21 1.615392 GGACCTGCTCAATTTTGTGCT 59.385 47.619 15.76 0.00 45.17 4.40
21 22 1.340889 TGGACCTGCTCAATTTTGTGC 59.659 47.619 9.72 9.72 45.16 4.57
22 23 3.068590 AGTTGGACCTGCTCAATTTTGTG 59.931 43.478 0.00 0.00 0.00 3.33
23 24 3.299503 AGTTGGACCTGCTCAATTTTGT 58.700 40.909 0.00 0.00 0.00 2.83
24 25 3.305608 GGAGTTGGACCTGCTCAATTTTG 60.306 47.826 14.72 0.00 0.00 2.44
25 26 2.893489 GGAGTTGGACCTGCTCAATTTT 59.107 45.455 14.72 0.00 0.00 1.82
26 27 2.108952 AGGAGTTGGACCTGCTCAATTT 59.891 45.455 14.72 0.00 36.30 1.82
27 28 1.707427 AGGAGTTGGACCTGCTCAATT 59.293 47.619 14.72 1.67 36.30 2.32
28 29 1.366319 AGGAGTTGGACCTGCTCAAT 58.634 50.000 14.72 3.76 36.30 2.57
29 30 1.902508 CTAGGAGTTGGACCTGCTCAA 59.097 52.381 14.72 4.89 38.31 3.02
30 31 1.203187 ACTAGGAGTTGGACCTGCTCA 60.203 52.381 14.72 0.00 38.31 4.26
31 32 1.562783 ACTAGGAGTTGGACCTGCTC 58.437 55.000 0.00 7.17 38.31 4.26
32 33 2.031495 AACTAGGAGTTGGACCTGCT 57.969 50.000 0.00 0.00 37.00 4.24
33 34 3.007614 TGTTAACTAGGAGTTGGACCTGC 59.992 47.826 7.22 0.00 39.11 4.85
34 35 4.527038 TCTGTTAACTAGGAGTTGGACCTG 59.473 45.833 7.22 0.00 39.11 4.00
35 36 4.748701 TCTGTTAACTAGGAGTTGGACCT 58.251 43.478 7.22 0.00 39.11 3.85
36 37 4.527427 ACTCTGTTAACTAGGAGTTGGACC 59.473 45.833 17.28 0.00 39.11 4.46
37 38 5.477637 AGACTCTGTTAACTAGGAGTTGGAC 59.522 44.000 21.08 13.26 39.11 4.02
38 39 5.642165 AGACTCTGTTAACTAGGAGTTGGA 58.358 41.667 21.08 3.48 39.11 3.53
39 40 5.986501 AGACTCTGTTAACTAGGAGTTGG 57.013 43.478 21.08 5.63 39.11 3.77
40 41 7.175293 AGTGTAGACTCTGTTAACTAGGAGTTG 59.825 40.741 21.08 7.44 39.11 3.16
41 42 7.232910 AGTGTAGACTCTGTTAACTAGGAGTT 58.767 38.462 21.08 15.83 41.97 3.01
42 43 6.781943 AGTGTAGACTCTGTTAACTAGGAGT 58.218 40.000 20.62 20.62 41.05 3.85
43 44 7.608761 AGAAGTGTAGACTCTGTTAACTAGGAG 59.391 40.741 7.22 13.07 0.00 3.69
44 45 7.460071 AGAAGTGTAGACTCTGTTAACTAGGA 58.540 38.462 7.22 2.25 0.00 2.94
45 46 7.608761 AGAGAAGTGTAGACTCTGTTAACTAGG 59.391 40.741 7.22 0.00 39.17 3.02
46 47 8.556213 AGAGAAGTGTAGACTCTGTTAACTAG 57.444 38.462 7.22 7.04 39.17 2.57
47 48 9.656040 CTAGAGAAGTGTAGACTCTGTTAACTA 57.344 37.037 7.22 0.00 40.53 2.24
48 49 8.158789 ACTAGAGAAGTGTAGACTCTGTTAACT 58.841 37.037 7.22 0.00 40.53 2.24
49 50 8.326680 ACTAGAGAAGTGTAGACTCTGTTAAC 57.673 38.462 0.00 0.00 40.53 2.01
50 51 8.921353 AACTAGAGAAGTGTAGACTCTGTTAA 57.079 34.615 0.00 0.00 40.53 2.01
51 52 9.434420 GTAACTAGAGAAGTGTAGACTCTGTTA 57.566 37.037 0.00 0.00 40.53 2.41
52 53 8.158789 AGTAACTAGAGAAGTGTAGACTCTGTT 58.841 37.037 0.00 0.98 40.53 3.16
53 54 7.604927 CAGTAACTAGAGAAGTGTAGACTCTGT 59.395 40.741 0.00 0.00 40.53 3.41
54 55 7.065324 CCAGTAACTAGAGAAGTGTAGACTCTG 59.935 44.444 0.00 0.00 40.53 3.35
55 56 7.107542 CCAGTAACTAGAGAAGTGTAGACTCT 58.892 42.308 0.00 0.00 42.51 3.24
56 57 6.183360 GCCAGTAACTAGAGAAGTGTAGACTC 60.183 46.154 0.00 0.00 38.88 3.36
57 58 5.648960 GCCAGTAACTAGAGAAGTGTAGACT 59.351 44.000 0.00 0.00 38.88 3.24
58 59 5.447548 CGCCAGTAACTAGAGAAGTGTAGAC 60.448 48.000 0.00 0.00 38.88 2.59
59 60 4.634883 CGCCAGTAACTAGAGAAGTGTAGA 59.365 45.833 0.00 0.00 38.88 2.59
60 61 4.731193 GCGCCAGTAACTAGAGAAGTGTAG 60.731 50.000 0.00 0.00 38.88 2.74
61 62 3.128242 GCGCCAGTAACTAGAGAAGTGTA 59.872 47.826 0.00 0.00 38.88 2.90
62 63 2.094649 GCGCCAGTAACTAGAGAAGTGT 60.095 50.000 0.00 0.00 38.88 3.55
63 64 2.531206 GCGCCAGTAACTAGAGAAGTG 58.469 52.381 0.00 0.00 38.88 3.16
64 65 1.132643 CGCGCCAGTAACTAGAGAAGT 59.867 52.381 0.00 0.00 41.49 3.01
65 66 1.828832 CGCGCCAGTAACTAGAGAAG 58.171 55.000 0.00 0.00 0.00 2.85
66 67 0.179145 GCGCGCCAGTAACTAGAGAA 60.179 55.000 23.24 0.00 0.00 2.87
67 68 1.030488 AGCGCGCCAGTAACTAGAGA 61.030 55.000 30.33 0.00 0.00 3.10
68 69 0.661552 TAGCGCGCCAGTAACTAGAG 59.338 55.000 30.33 0.00 0.00 2.43
69 70 1.266175 GATAGCGCGCCAGTAACTAGA 59.734 52.381 30.33 0.15 0.00 2.43
70 71 1.687628 GATAGCGCGCCAGTAACTAG 58.312 55.000 30.33 0.00 0.00 2.57
71 72 0.040692 CGATAGCGCGCCAGTAACTA 60.041 55.000 30.33 12.38 0.00 2.24
72 73 1.299165 CGATAGCGCGCCAGTAACT 60.299 57.895 30.33 10.14 0.00 2.24
73 74 0.868602 TTCGATAGCGCGCCAGTAAC 60.869 55.000 30.33 11.75 37.46 2.50
74 75 0.031585 ATTCGATAGCGCGCCAGTAA 59.968 50.000 30.33 16.40 37.46 2.24
75 76 0.876399 TATTCGATAGCGCGCCAGTA 59.124 50.000 30.33 14.92 37.46 2.74
76 77 0.031585 TTATTCGATAGCGCGCCAGT 59.968 50.000 30.33 14.54 37.46 4.00
77 78 1.059692 CATTATTCGATAGCGCGCCAG 59.940 52.381 30.33 16.78 37.46 4.85
78 79 1.067693 CATTATTCGATAGCGCGCCA 58.932 50.000 30.33 16.82 37.46 5.69
79 80 1.346365 TCATTATTCGATAGCGCGCC 58.654 50.000 30.33 12.17 37.46 6.53
80 81 2.408704 AGTTCATTATTCGATAGCGCGC 59.591 45.455 26.66 26.66 37.46 6.86
81 82 5.933734 ATAGTTCATTATTCGATAGCGCG 57.066 39.130 0.00 0.00 37.46 6.86
82 83 8.009974 ACAAAATAGTTCATTATTCGATAGCGC 58.990 33.333 0.00 0.00 37.46 5.92
83 84 9.517361 GACAAAATAGTTCATTATTCGATAGCG 57.483 33.333 0.00 0.00 39.35 4.26
84 85 9.813080 GGACAAAATAGTTCATTATTCGATAGC 57.187 33.333 0.00 0.00 0.00 2.97
99 100 9.436957 CACATTGACTAGTAAGGACAAAATAGT 57.563 33.333 0.00 0.00 30.89 2.12
100 101 9.436957 ACACATTGACTAGTAAGGACAAAATAG 57.563 33.333 0.00 0.00 30.89 1.73
102 103 9.216117 GTACACATTGACTAGTAAGGACAAAAT 57.784 33.333 0.00 0.00 30.89 1.82
103 104 8.205512 TGTACACATTGACTAGTAAGGACAAAA 58.794 33.333 0.00 0.00 30.89 2.44
104 105 7.728148 TGTACACATTGACTAGTAAGGACAAA 58.272 34.615 0.00 0.00 30.89 2.83
105 106 7.292713 TGTACACATTGACTAGTAAGGACAA 57.707 36.000 0.00 0.00 0.00 3.18
106 107 6.904463 TGTACACATTGACTAGTAAGGACA 57.096 37.500 0.00 0.00 0.00 4.02
107 108 6.255887 GCATGTACACATTGACTAGTAAGGAC 59.744 42.308 0.00 0.00 33.61 3.85
108 109 6.071051 TGCATGTACACATTGACTAGTAAGGA 60.071 38.462 0.00 0.00 33.61 3.36
109 110 6.106003 TGCATGTACACATTGACTAGTAAGG 58.894 40.000 0.00 0.00 33.61 2.69
110 111 7.595311 TTGCATGTACACATTGACTAGTAAG 57.405 36.000 0.00 0.00 33.61 2.34
111 112 7.413988 GCATTGCATGTACACATTGACTAGTAA 60.414 37.037 3.15 0.00 33.61 2.24
112 113 6.037062 GCATTGCATGTACACATTGACTAGTA 59.963 38.462 3.15 0.00 33.61 1.82
113 114 5.163723 GCATTGCATGTACACATTGACTAGT 60.164 40.000 3.15 0.00 33.61 2.57
114 115 5.163733 TGCATTGCATGTACACATTGACTAG 60.164 40.000 7.38 0.00 33.61 2.57
115 116 4.699257 TGCATTGCATGTACACATTGACTA 59.301 37.500 7.38 0.00 33.61 2.59
116 117 3.506844 TGCATTGCATGTACACATTGACT 59.493 39.130 7.38 0.00 33.61 3.41
117 118 3.609373 GTGCATTGCATGTACACATTGAC 59.391 43.478 15.49 0.00 44.02 3.18
118 119 3.670091 CGTGCATTGCATGTACACATTGA 60.670 43.478 20.40 0.00 44.70 2.57
119 120 2.595095 CGTGCATTGCATGTACACATTG 59.405 45.455 20.40 0.94 44.70 2.82
120 121 2.866198 CGTGCATTGCATGTACACATT 58.134 42.857 20.40 0.00 44.70 2.71
121 122 2.547913 CGTGCATTGCATGTACACAT 57.452 45.000 20.40 0.00 44.70 3.21
129 130 5.695816 ACTTTCAAATTAACGTGCATTGCAT 59.304 32.000 15.49 1.17 41.91 3.96
130 131 5.046529 ACTTTCAAATTAACGTGCATTGCA 58.953 33.333 7.38 7.38 35.60 4.08
131 132 5.574815 ACTTTCAAATTAACGTGCATTGC 57.425 34.783 0.46 0.46 0.00 3.56
143 144 9.184062 CGCATGCACATAATATACTTTCAAATT 57.816 29.630 19.57 0.00 0.00 1.82
144 145 7.809331 CCGCATGCACATAATATACTTTCAAAT 59.191 33.333 19.57 0.00 0.00 2.32
145 146 7.012799 TCCGCATGCACATAATATACTTTCAAA 59.987 33.333 19.57 0.00 0.00 2.69
146 147 6.484977 TCCGCATGCACATAATATACTTTCAA 59.515 34.615 19.57 0.00 0.00 2.69
147 148 5.994668 TCCGCATGCACATAATATACTTTCA 59.005 36.000 19.57 0.00 0.00 2.69
148 149 6.480524 TCCGCATGCACATAATATACTTTC 57.519 37.500 19.57 0.00 0.00 2.62
149 150 8.737168 ATATCCGCATGCACATAATATACTTT 57.263 30.769 19.57 0.00 0.00 2.66
150 151 8.737168 AATATCCGCATGCACATAATATACTT 57.263 30.769 19.57 0.64 0.00 2.24
151 152 9.830975 TTAATATCCGCATGCACATAATATACT 57.169 29.630 19.57 2.37 0.00 2.12
153 154 9.830975 ACTTAATATCCGCATGCACATAATATA 57.169 29.630 19.57 4.53 0.00 0.86
154 155 8.737168 ACTTAATATCCGCATGCACATAATAT 57.263 30.769 19.57 9.48 0.00 1.28
155 156 9.093970 GTACTTAATATCCGCATGCACATAATA 57.906 33.333 19.57 7.44 0.00 0.98
156 157 7.606073 TGTACTTAATATCCGCATGCACATAAT 59.394 33.333 19.57 8.40 0.00 1.28
157 158 6.931840 TGTACTTAATATCCGCATGCACATAA 59.068 34.615 19.57 6.81 0.00 1.90
158 159 6.459923 TGTACTTAATATCCGCATGCACATA 58.540 36.000 19.57 12.86 0.00 2.29
159 160 5.304778 TGTACTTAATATCCGCATGCACAT 58.695 37.500 19.57 10.94 0.00 3.21
160 161 4.698575 TGTACTTAATATCCGCATGCACA 58.301 39.130 19.57 6.74 0.00 4.57
161 162 5.666969 TTGTACTTAATATCCGCATGCAC 57.333 39.130 19.57 3.93 0.00 4.57
162 163 8.560355 AATATTGTACTTAATATCCGCATGCA 57.440 30.769 19.57 0.00 33.32 3.96
186 187 9.658475 GCTAATCACATAATAACACGCAAATAA 57.342 29.630 0.00 0.00 0.00 1.40
187 188 8.007152 CGCTAATCACATAATAACACGCAAATA 58.993 33.333 0.00 0.00 0.00 1.40
188 189 6.850823 CGCTAATCACATAATAACACGCAAAT 59.149 34.615 0.00 0.00 0.00 2.32
189 190 6.188871 CGCTAATCACATAATAACACGCAAA 58.811 36.000 0.00 0.00 0.00 3.68
190 191 5.733299 CGCTAATCACATAATAACACGCAA 58.267 37.500 0.00 0.00 0.00 4.85
191 192 4.318475 GCGCTAATCACATAATAACACGCA 60.318 41.667 0.00 0.00 40.98 5.24
192 193 4.084537 AGCGCTAATCACATAATAACACGC 60.085 41.667 8.99 0.00 41.56 5.34
193 194 5.576337 AGCGCTAATCACATAATAACACG 57.424 39.130 8.99 0.00 0.00 4.49
199 200 9.435688 TGTCAAATATAGCGCTAATCACATAAT 57.564 29.630 22.98 4.88 0.00 1.28
200 201 8.825667 TGTCAAATATAGCGCTAATCACATAA 57.174 30.769 22.98 0.00 0.00 1.90
201 202 8.872845 CATGTCAAATATAGCGCTAATCACATA 58.127 33.333 22.98 9.59 0.00 2.29
202 203 7.603784 TCATGTCAAATATAGCGCTAATCACAT 59.396 33.333 22.98 18.48 0.00 3.21
203 204 6.928492 TCATGTCAAATATAGCGCTAATCACA 59.072 34.615 22.98 17.17 0.00 3.58
204 205 7.351414 TCATGTCAAATATAGCGCTAATCAC 57.649 36.000 22.98 12.36 0.00 3.06
205 206 7.961325 TTCATGTCAAATATAGCGCTAATCA 57.039 32.000 22.98 10.19 0.00 2.57
206 207 9.831737 AATTTCATGTCAAATATAGCGCTAATC 57.168 29.630 22.98 7.42 0.00 1.75
210 211 8.840321 AGTTAATTTCATGTCAAATATAGCGCT 58.160 29.630 17.26 17.26 0.00 5.92
211 212 8.895845 CAGTTAATTTCATGTCAAATATAGCGC 58.104 33.333 0.00 0.00 0.00 5.92
212 213 8.895845 GCAGTTAATTTCATGTCAAATATAGCG 58.104 33.333 0.00 0.00 0.00 4.26
213 214 9.734620 TGCAGTTAATTTCATGTCAAATATAGC 57.265 29.630 0.00 0.00 0.00 2.97
215 216 9.715123 CGTGCAGTTAATTTCATGTCAAATATA 57.285 29.630 0.00 0.00 0.00 0.86
216 217 7.220683 GCGTGCAGTTAATTTCATGTCAAATAT 59.779 33.333 0.00 0.00 0.00 1.28
217 218 6.526325 GCGTGCAGTTAATTTCATGTCAAATA 59.474 34.615 0.00 0.00 0.00 1.40
218 219 5.345741 GCGTGCAGTTAATTTCATGTCAAAT 59.654 36.000 0.00 0.00 0.00 2.32
219 220 4.679197 GCGTGCAGTTAATTTCATGTCAAA 59.321 37.500 0.00 0.00 0.00 2.69
220 221 4.023279 AGCGTGCAGTTAATTTCATGTCAA 60.023 37.500 0.00 0.00 0.00 3.18
221 222 3.501828 AGCGTGCAGTTAATTTCATGTCA 59.498 39.130 0.00 0.00 0.00 3.58
222 223 4.083581 AGCGTGCAGTTAATTTCATGTC 57.916 40.909 0.00 0.00 0.00 3.06
223 224 5.621197 TTAGCGTGCAGTTAATTTCATGT 57.379 34.783 0.00 0.00 0.00 3.21
224 225 5.002468 CGTTTAGCGTGCAGTTAATTTCATG 59.998 40.000 0.00 0.00 35.54 3.07
225 226 5.086058 CGTTTAGCGTGCAGTTAATTTCAT 58.914 37.500 0.00 0.00 35.54 2.57
226 227 4.459606 CGTTTAGCGTGCAGTTAATTTCA 58.540 39.130 0.00 0.00 35.54 2.69
241 242 1.387084 CGAGCTCTCAACACGTTTAGC 59.613 52.381 12.85 0.00 0.00 3.09
242 243 1.986378 CCGAGCTCTCAACACGTTTAG 59.014 52.381 12.85 0.00 0.00 1.85
243 244 1.933500 GCCGAGCTCTCAACACGTTTA 60.934 52.381 12.85 0.00 0.00 2.01
244 245 1.222115 GCCGAGCTCTCAACACGTTT 61.222 55.000 12.85 0.00 0.00 3.60
245 246 1.664965 GCCGAGCTCTCAACACGTT 60.665 57.895 12.85 0.00 0.00 3.99
246 247 2.049063 GCCGAGCTCTCAACACGT 60.049 61.111 12.85 0.00 0.00 4.49
247 248 2.049156 TGCCGAGCTCTCAACACG 60.049 61.111 12.85 0.00 0.00 4.49
248 249 1.005630 AGTGCCGAGCTCTCAACAC 60.006 57.895 12.85 13.55 36.12 3.32
249 250 1.005748 CAGTGCCGAGCTCTCAACA 60.006 57.895 12.85 1.40 29.56 3.33
250 251 0.319900 TTCAGTGCCGAGCTCTCAAC 60.320 55.000 12.85 6.78 29.56 3.18
251 252 0.037882 CTTCAGTGCCGAGCTCTCAA 60.038 55.000 12.85 0.00 29.56 3.02
252 253 1.588597 CTTCAGTGCCGAGCTCTCA 59.411 57.895 12.85 6.80 29.56 3.27
253 254 1.809209 GCTTCAGTGCCGAGCTCTC 60.809 63.158 12.85 3.99 33.72 3.20
254 255 2.264166 GCTTCAGTGCCGAGCTCT 59.736 61.111 12.85 0.00 33.72 4.09
255 256 2.099431 CAGCTTCAGTGCCGAGCTC 61.099 63.158 2.73 2.73 44.44 4.09
257 258 1.510480 AAACAGCTTCAGTGCCGAGC 61.510 55.000 5.22 5.22 36.68 5.03
258 259 1.728971 CTAAACAGCTTCAGTGCCGAG 59.271 52.381 0.00 0.00 0.00 4.63
259 260 1.608025 CCTAAACAGCTTCAGTGCCGA 60.608 52.381 0.00 0.00 0.00 5.54
260 261 0.798776 CCTAAACAGCTTCAGTGCCG 59.201 55.000 0.00 0.00 0.00 5.69
261 262 1.807142 GACCTAAACAGCTTCAGTGCC 59.193 52.381 0.00 0.00 0.00 5.01
262 263 1.461127 CGACCTAAACAGCTTCAGTGC 59.539 52.381 0.00 0.00 0.00 4.40
263 264 2.755650 ACGACCTAAACAGCTTCAGTG 58.244 47.619 0.00 0.00 0.00 3.66
264 265 3.391049 GAACGACCTAAACAGCTTCAGT 58.609 45.455 0.00 0.00 0.00 3.41
265 266 2.408704 CGAACGACCTAAACAGCTTCAG 59.591 50.000 0.00 0.00 0.00 3.02
266 267 2.034939 TCGAACGACCTAAACAGCTTCA 59.965 45.455 0.00 0.00 0.00 3.02
267 268 2.669364 TCGAACGACCTAAACAGCTTC 58.331 47.619 0.00 0.00 0.00 3.86
268 269 2.806608 TCGAACGACCTAAACAGCTT 57.193 45.000 0.00 0.00 0.00 3.74
269 270 2.993899 CAATCGAACGACCTAAACAGCT 59.006 45.455 0.00 0.00 0.00 4.24
270 271 2.991190 TCAATCGAACGACCTAAACAGC 59.009 45.455 0.00 0.00 0.00 4.40
271 272 3.985279 TGTCAATCGAACGACCTAAACAG 59.015 43.478 13.27 0.00 0.00 3.16
272 273 3.979948 TGTCAATCGAACGACCTAAACA 58.020 40.909 13.27 0.00 0.00 2.83
273 274 4.624024 TCATGTCAATCGAACGACCTAAAC 59.376 41.667 13.27 0.00 0.00 2.01
274 275 4.811908 TCATGTCAATCGAACGACCTAAA 58.188 39.130 13.27 0.00 0.00 1.85
275 276 4.443913 TCATGTCAATCGAACGACCTAA 57.556 40.909 13.27 0.00 0.00 2.69
276 277 4.649088 ATCATGTCAATCGAACGACCTA 57.351 40.909 13.27 0.00 0.00 3.08
277 278 3.526931 ATCATGTCAATCGAACGACCT 57.473 42.857 13.27 3.07 0.00 3.85
278 279 4.600012 AAATCATGTCAATCGAACGACC 57.400 40.909 13.27 0.00 0.00 4.79
279 280 6.628856 CCATTAAATCATGTCAATCGAACGAC 59.371 38.462 9.92 9.92 0.00 4.34
280 281 6.714492 CCATTAAATCATGTCAATCGAACGA 58.286 36.000 0.00 0.00 0.00 3.85
281 282 5.396362 GCCATTAAATCATGTCAATCGAACG 59.604 40.000 0.00 0.00 0.00 3.95
282 283 5.687285 GGCCATTAAATCATGTCAATCGAAC 59.313 40.000 0.00 0.00 0.00 3.95
283 284 5.505489 CGGCCATTAAATCATGTCAATCGAA 60.505 40.000 2.24 0.00 0.00 3.71
284 285 4.024133 CGGCCATTAAATCATGTCAATCGA 60.024 41.667 2.24 0.00 0.00 3.59
285 286 4.024133 TCGGCCATTAAATCATGTCAATCG 60.024 41.667 2.24 0.00 0.00 3.34
286 287 5.239306 TCTCGGCCATTAAATCATGTCAATC 59.761 40.000 2.24 0.00 0.00 2.67
287 288 5.132502 TCTCGGCCATTAAATCATGTCAAT 58.867 37.500 2.24 0.00 0.00 2.57
288 289 4.522114 TCTCGGCCATTAAATCATGTCAA 58.478 39.130 2.24 0.00 0.00 3.18
289 290 4.149511 TCTCGGCCATTAAATCATGTCA 57.850 40.909 2.24 0.00 0.00 3.58
290 291 5.695851 AATCTCGGCCATTAAATCATGTC 57.304 39.130 2.24 0.00 0.00 3.06
291 292 7.765695 ATTAATCTCGGCCATTAAATCATGT 57.234 32.000 2.24 0.00 31.15 3.21
292 293 7.543172 CCAATTAATCTCGGCCATTAAATCATG 59.457 37.037 2.24 4.96 31.15 3.07
293 294 7.451255 TCCAATTAATCTCGGCCATTAAATCAT 59.549 33.333 2.24 0.00 31.15 2.45
294 295 6.775142 TCCAATTAATCTCGGCCATTAAATCA 59.225 34.615 2.24 0.00 31.15 2.57
295 296 7.214467 TCCAATTAATCTCGGCCATTAAATC 57.786 36.000 2.24 0.00 31.15 2.17
296 297 7.671398 AGATCCAATTAATCTCGGCCATTAAAT 59.329 33.333 2.24 0.00 31.15 1.40
297 298 7.004086 AGATCCAATTAATCTCGGCCATTAAA 58.996 34.615 2.24 0.00 31.15 1.52
298 299 6.430925 CAGATCCAATTAATCTCGGCCATTAA 59.569 38.462 2.24 6.37 31.05 1.40
299 300 5.939883 CAGATCCAATTAATCTCGGCCATTA 59.060 40.000 2.24 0.00 31.05 1.90
300 301 4.763793 CAGATCCAATTAATCTCGGCCATT 59.236 41.667 2.24 0.00 31.05 3.16
301 302 4.202503 ACAGATCCAATTAATCTCGGCCAT 60.203 41.667 2.24 0.00 31.05 4.40
302 303 3.136443 ACAGATCCAATTAATCTCGGCCA 59.864 43.478 2.24 0.00 31.05 5.36
303 304 3.744660 ACAGATCCAATTAATCTCGGCC 58.255 45.455 0.00 0.00 31.05 6.13
304 305 3.748568 GGACAGATCCAATTAATCTCGGC 59.251 47.826 0.62 0.55 45.47 5.54
380 381 8.988060 CCCCCTTCCTAAAACAATATTAACAAT 58.012 33.333 0.00 0.00 0.00 2.71
381 382 8.178132 TCCCCCTTCCTAAAACAATATTAACAA 58.822 33.333 0.00 0.00 0.00 2.83
382 383 7.710579 TCCCCCTTCCTAAAACAATATTAACA 58.289 34.615 0.00 0.00 0.00 2.41
383 384 8.598202 TTCCCCCTTCCTAAAACAATATTAAC 57.402 34.615 0.00 0.00 0.00 2.01
384 385 9.429109 GATTCCCCCTTCCTAAAACAATATTAA 57.571 33.333 0.00 0.00 0.00 1.40
385 386 8.570470 TGATTCCCCCTTCCTAAAACAATATTA 58.430 33.333 0.00 0.00 0.00 0.98
386 387 7.426667 TGATTCCCCCTTCCTAAAACAATATT 58.573 34.615 0.00 0.00 0.00 1.28
387 388 6.992235 TGATTCCCCCTTCCTAAAACAATAT 58.008 36.000 0.00 0.00 0.00 1.28
388 389 6.410222 TGATTCCCCCTTCCTAAAACAATA 57.590 37.500 0.00 0.00 0.00 1.90
389 390 5.283876 TGATTCCCCCTTCCTAAAACAAT 57.716 39.130 0.00 0.00 0.00 2.71
390 391 4.750833 TGATTCCCCCTTCCTAAAACAA 57.249 40.909 0.00 0.00 0.00 2.83
391 392 4.750833 TTGATTCCCCCTTCCTAAAACA 57.249 40.909 0.00 0.00 0.00 2.83
392 393 5.626809 GCATTTGATTCCCCCTTCCTAAAAC 60.627 44.000 0.00 0.00 0.00 2.43
393 394 4.469586 GCATTTGATTCCCCCTTCCTAAAA 59.530 41.667 0.00 0.00 0.00 1.52
394 395 4.030216 GCATTTGATTCCCCCTTCCTAAA 58.970 43.478 0.00 0.00 0.00 1.85
395 396 3.012274 TGCATTTGATTCCCCCTTCCTAA 59.988 43.478 0.00 0.00 0.00 2.69
396 397 2.584965 TGCATTTGATTCCCCCTTCCTA 59.415 45.455 0.00 0.00 0.00 2.94
397 398 1.362237 TGCATTTGATTCCCCCTTCCT 59.638 47.619 0.00 0.00 0.00 3.36
398 399 1.864669 TGCATTTGATTCCCCCTTCC 58.135 50.000 0.00 0.00 0.00 3.46
399 400 3.979101 TTTGCATTTGATTCCCCCTTC 57.021 42.857 0.00 0.00 0.00 3.46
400 401 3.009363 CCTTTTGCATTTGATTCCCCCTT 59.991 43.478 0.00 0.00 0.00 3.95
401 402 2.573009 CCTTTTGCATTTGATTCCCCCT 59.427 45.455 0.00 0.00 0.00 4.79
402 403 2.940971 GCCTTTTGCATTTGATTCCCCC 60.941 50.000 0.00 0.00 40.77 5.40
403 404 2.358957 GCCTTTTGCATTTGATTCCCC 58.641 47.619 0.00 0.00 40.77 4.81
404 405 2.001872 CGCCTTTTGCATTTGATTCCC 58.998 47.619 0.00 0.00 41.33 3.97
405 406 2.001872 CCGCCTTTTGCATTTGATTCC 58.998 47.619 0.00 0.00 41.33 3.01
406 407 2.958213 TCCGCCTTTTGCATTTGATTC 58.042 42.857 0.00 0.00 41.33 2.52
407 408 3.399440 TTCCGCCTTTTGCATTTGATT 57.601 38.095 0.00 0.00 41.33 2.57
408 409 3.066380 GTTTCCGCCTTTTGCATTTGAT 58.934 40.909 0.00 0.00 41.33 2.57
409 410 2.478831 GTTTCCGCCTTTTGCATTTGA 58.521 42.857 0.00 0.00 41.33 2.69
410 411 1.530720 GGTTTCCGCCTTTTGCATTTG 59.469 47.619 0.00 0.00 41.33 2.32
411 412 1.542328 GGGTTTCCGCCTTTTGCATTT 60.542 47.619 0.00 0.00 41.33 2.32
412 413 0.034756 GGGTTTCCGCCTTTTGCATT 59.965 50.000 0.00 0.00 41.33 3.56
413 414 1.118356 TGGGTTTCCGCCTTTTGCAT 61.118 50.000 0.00 0.00 41.33 3.96
414 415 1.743321 CTGGGTTTCCGCCTTTTGCA 61.743 55.000 0.00 0.00 41.33 4.08
415 416 1.006220 CTGGGTTTCCGCCTTTTGC 60.006 57.895 0.00 0.00 35.24 3.68
416 417 1.006220 GCTGGGTTTCCGCCTTTTG 60.006 57.895 0.00 0.00 35.24 2.44
417 418 2.207229 GGCTGGGTTTCCGCCTTTT 61.207 57.895 9.74 0.00 44.02 2.27
418 419 2.600470 GGCTGGGTTTCCGCCTTT 60.600 61.111 9.74 0.00 44.02 3.11
419 420 3.868200 CTGGCTGGGTTTCCGCCTT 62.868 63.158 15.25 0.00 45.99 4.35
420 421 4.351054 CTGGCTGGGTTTCCGCCT 62.351 66.667 15.25 0.00 45.99 5.52
422 423 4.344865 TCCTGGCTGGGTTTCCGC 62.345 66.667 10.79 0.00 36.20 5.54
423 424 1.550130 TAGTCCTGGCTGGGTTTCCG 61.550 60.000 10.79 0.00 36.20 4.30
424 425 0.253327 CTAGTCCTGGCTGGGTTTCC 59.747 60.000 10.79 0.00 36.20 3.13
425 426 1.208293 CTCTAGTCCTGGCTGGGTTTC 59.792 57.143 10.79 0.00 36.20 2.78
426 427 1.280457 CTCTAGTCCTGGCTGGGTTT 58.720 55.000 10.79 0.00 36.20 3.27
427 428 0.618968 CCTCTAGTCCTGGCTGGGTT 60.619 60.000 10.79 2.01 36.20 4.11
428 429 1.002274 CCTCTAGTCCTGGCTGGGT 59.998 63.158 10.79 1.21 36.20 4.51
429 430 2.439104 GCCTCTAGTCCTGGCTGGG 61.439 68.421 10.79 0.45 43.05 4.45
430 431 2.790791 CGCCTCTAGTCCTGGCTGG 61.791 68.421 3.65 3.65 44.09 4.85
431 432 2.790791 CCGCCTCTAGTCCTGGCTG 61.791 68.421 13.56 6.57 44.09 4.85
432 433 2.443016 CCGCCTCTAGTCCTGGCT 60.443 66.667 13.56 0.00 44.09 4.75
433 434 4.228567 GCCGCCTCTAGTCCTGGC 62.229 72.222 0.00 0.00 42.94 4.85
434 435 0.827925 TATGCCGCCTCTAGTCCTGG 60.828 60.000 0.00 0.00 0.00 4.45
435 436 1.000283 CTTATGCCGCCTCTAGTCCTG 60.000 57.143 0.00 0.00 0.00 3.86
436 437 1.133450 TCTTATGCCGCCTCTAGTCCT 60.133 52.381 0.00 0.00 0.00 3.85
437 438 1.329256 TCTTATGCCGCCTCTAGTCC 58.671 55.000 0.00 0.00 0.00 3.85
438 439 2.100916 TGTTCTTATGCCGCCTCTAGTC 59.899 50.000 0.00 0.00 0.00 2.59
439 440 2.101582 CTGTTCTTATGCCGCCTCTAGT 59.898 50.000 0.00 0.00 0.00 2.57
440 441 2.362397 TCTGTTCTTATGCCGCCTCTAG 59.638 50.000 0.00 0.00 0.00 2.43
441 442 2.384828 TCTGTTCTTATGCCGCCTCTA 58.615 47.619 0.00 0.00 0.00 2.43
442 443 1.195115 TCTGTTCTTATGCCGCCTCT 58.805 50.000 0.00 0.00 0.00 3.69
443 444 2.024176 TTCTGTTCTTATGCCGCCTC 57.976 50.000 0.00 0.00 0.00 4.70
444 445 2.084546 GTTTCTGTTCTTATGCCGCCT 58.915 47.619 0.00 0.00 0.00 5.52
445 446 1.202031 CGTTTCTGTTCTTATGCCGCC 60.202 52.381 0.00 0.00 0.00 6.13
446 447 1.730064 TCGTTTCTGTTCTTATGCCGC 59.270 47.619 0.00 0.00 0.00 6.53
447 448 2.993899 AGTCGTTTCTGTTCTTATGCCG 59.006 45.455 0.00 0.00 0.00 5.69
448 449 5.062308 CAGTAGTCGTTTCTGTTCTTATGCC 59.938 44.000 0.00 0.00 0.00 4.40
449 450 5.862323 TCAGTAGTCGTTTCTGTTCTTATGC 59.138 40.000 0.00 0.00 0.00 3.14
450 451 7.869016 TTCAGTAGTCGTTTCTGTTCTTATG 57.131 36.000 0.00 0.00 0.00 1.90
451 452 8.304596 TGATTCAGTAGTCGTTTCTGTTCTTAT 58.695 33.333 0.00 0.00 0.00 1.73
452 453 7.654568 TGATTCAGTAGTCGTTTCTGTTCTTA 58.345 34.615 0.00 0.00 0.00 2.10
453 454 6.513180 TGATTCAGTAGTCGTTTCTGTTCTT 58.487 36.000 0.00 0.00 0.00 2.52
454 455 6.085555 TGATTCAGTAGTCGTTTCTGTTCT 57.914 37.500 0.00 0.00 0.00 3.01
455 456 6.586463 TGATGATTCAGTAGTCGTTTCTGTTC 59.414 38.462 0.00 0.00 0.00 3.18
456 457 6.455647 TGATGATTCAGTAGTCGTTTCTGTT 58.544 36.000 0.00 0.00 0.00 3.16
457 458 6.025749 TGATGATTCAGTAGTCGTTTCTGT 57.974 37.500 0.00 0.00 0.00 3.41
458 459 6.366061 TGTTGATGATTCAGTAGTCGTTTCTG 59.634 38.462 0.00 0.00 32.27 3.02
459 460 6.455647 TGTTGATGATTCAGTAGTCGTTTCT 58.544 36.000 0.00 0.00 32.27 2.52
460 461 6.670927 GCTGTTGATGATTCAGTAGTCGTTTC 60.671 42.308 0.00 0.00 32.27 2.78
461 462 5.120830 GCTGTTGATGATTCAGTAGTCGTTT 59.879 40.000 0.00 0.00 32.27 3.60
462 463 4.627467 GCTGTTGATGATTCAGTAGTCGTT 59.373 41.667 0.00 0.00 32.27 3.85
463 464 4.177026 GCTGTTGATGATTCAGTAGTCGT 58.823 43.478 0.00 0.00 32.27 4.34
464 465 4.176271 TGCTGTTGATGATTCAGTAGTCG 58.824 43.478 0.00 0.00 32.27 4.18
465 466 5.414360 TCTGCTGTTGATGATTCAGTAGTC 58.586 41.667 8.70 0.00 40.75 2.59
466 467 5.411831 TCTGCTGTTGATGATTCAGTAGT 57.588 39.130 8.70 0.00 40.75 2.73
467 468 6.732531 TTTCTGCTGTTGATGATTCAGTAG 57.267 37.500 0.00 0.00 41.08 2.57
468 469 6.936335 TCTTTTCTGCTGTTGATGATTCAGTA 59.064 34.615 0.00 0.00 32.27 2.74
469 470 5.766670 TCTTTTCTGCTGTTGATGATTCAGT 59.233 36.000 0.00 0.00 32.27 3.41
470 471 6.148976 TCTCTTTTCTGCTGTTGATGATTCAG 59.851 38.462 0.00 0.00 32.27 3.02
471 472 5.999600 TCTCTTTTCTGCTGTTGATGATTCA 59.000 36.000 0.00 0.00 0.00 2.57
472 473 6.313252 GTCTCTTTTCTGCTGTTGATGATTC 58.687 40.000 0.00 0.00 0.00 2.52
473 474 5.106791 CGTCTCTTTTCTGCTGTTGATGATT 60.107 40.000 0.00 0.00 0.00 2.57
474 475 4.391216 CGTCTCTTTTCTGCTGTTGATGAT 59.609 41.667 0.00 0.00 0.00 2.45
475 476 3.742882 CGTCTCTTTTCTGCTGTTGATGA 59.257 43.478 0.00 0.00 0.00 2.92
476 477 3.742882 TCGTCTCTTTTCTGCTGTTGATG 59.257 43.478 0.00 0.00 0.00 3.07
477 478 3.995199 TCGTCTCTTTTCTGCTGTTGAT 58.005 40.909 0.00 0.00 0.00 2.57
478 479 3.452755 TCGTCTCTTTTCTGCTGTTGA 57.547 42.857 0.00 0.00 0.00 3.18
479 480 5.164233 TCTATCGTCTCTTTTCTGCTGTTG 58.836 41.667 0.00 0.00 0.00 3.33
480 481 5.392767 TCTATCGTCTCTTTTCTGCTGTT 57.607 39.130 0.00 0.00 0.00 3.16
481 482 5.392767 TTCTATCGTCTCTTTTCTGCTGT 57.607 39.130 0.00 0.00 0.00 4.40
482 483 6.671879 GCTTTTCTATCGTCTCTTTTCTGCTG 60.672 42.308 0.00 0.00 0.00 4.41
483 484 5.350091 GCTTTTCTATCGTCTCTTTTCTGCT 59.650 40.000 0.00 0.00 0.00 4.24
484 485 5.120830 TGCTTTTCTATCGTCTCTTTTCTGC 59.879 40.000 0.00 0.00 0.00 4.26
485 486 6.367422 ACTGCTTTTCTATCGTCTCTTTTCTG 59.633 38.462 0.00 0.00 0.00 3.02
486 487 6.459923 ACTGCTTTTCTATCGTCTCTTTTCT 58.540 36.000 0.00 0.00 0.00 2.52
487 488 6.713792 ACTGCTTTTCTATCGTCTCTTTTC 57.286 37.500 0.00 0.00 0.00 2.29
488 489 6.566753 GCAACTGCTTTTCTATCGTCTCTTTT 60.567 38.462 0.00 0.00 38.21 2.27
489 490 5.106908 GCAACTGCTTTTCTATCGTCTCTTT 60.107 40.000 0.00 0.00 38.21 2.52
490 491 4.390297 GCAACTGCTTTTCTATCGTCTCTT 59.610 41.667 0.00 0.00 38.21 2.85
491 492 3.929610 GCAACTGCTTTTCTATCGTCTCT 59.070 43.478 0.00 0.00 38.21 3.10
492 493 4.251960 GCAACTGCTTTTCTATCGTCTC 57.748 45.455 0.00 0.00 38.21 3.36
506 507 6.363357 CACTAAACCTTTTAATCAGCAACTGC 59.637 38.462 0.00 0.00 42.49 4.40
507 508 7.425606 ACACTAAACCTTTTAATCAGCAACTG 58.574 34.615 0.00 0.00 0.00 3.16
508 509 7.502561 AGACACTAAACCTTTTAATCAGCAACT 59.497 33.333 0.00 0.00 0.00 3.16
509 510 7.649057 AGACACTAAACCTTTTAATCAGCAAC 58.351 34.615 0.00 0.00 0.00 4.17
510 511 7.817418 AGACACTAAACCTTTTAATCAGCAA 57.183 32.000 0.00 0.00 0.00 3.91
511 512 7.255451 CCAAGACACTAAACCTTTTAATCAGCA 60.255 37.037 0.00 0.00 0.00 4.41
512 513 7.040686 TCCAAGACACTAAACCTTTTAATCAGC 60.041 37.037 0.00 0.00 0.00 4.26
513 514 8.391075 TCCAAGACACTAAACCTTTTAATCAG 57.609 34.615 0.00 0.00 0.00 2.90
514 515 8.754991 TTCCAAGACACTAAACCTTTTAATCA 57.245 30.769 0.00 0.00 0.00 2.57
516 517 9.981114 CATTTCCAAGACACTAAACCTTTTAAT 57.019 29.630 0.00 0.00 0.00 1.40
517 518 7.923878 GCATTTCCAAGACACTAAACCTTTTAA 59.076 33.333 0.00 0.00 0.00 1.52
518 519 7.068839 TGCATTTCCAAGACACTAAACCTTTTA 59.931 33.333 0.00 0.00 0.00 1.52
519 520 6.127196 TGCATTTCCAAGACACTAAACCTTTT 60.127 34.615 0.00 0.00 0.00 2.27
520 521 5.362430 TGCATTTCCAAGACACTAAACCTTT 59.638 36.000 0.00 0.00 0.00 3.11
521 522 4.892934 TGCATTTCCAAGACACTAAACCTT 59.107 37.500 0.00 0.00 0.00 3.50
522 523 4.469657 TGCATTTCCAAGACACTAAACCT 58.530 39.130 0.00 0.00 0.00 3.50
523 524 4.846779 TGCATTTCCAAGACACTAAACC 57.153 40.909 0.00 0.00 0.00 3.27
524 525 4.622740 GCATGCATTTCCAAGACACTAAAC 59.377 41.667 14.21 0.00 0.00 2.01
525 526 4.523943 AGCATGCATTTCCAAGACACTAAA 59.476 37.500 21.98 0.00 0.00 1.85
526 527 4.081406 AGCATGCATTTCCAAGACACTAA 58.919 39.130 21.98 0.00 0.00 2.24
527 528 3.689347 AGCATGCATTTCCAAGACACTA 58.311 40.909 21.98 0.00 0.00 2.74
528 529 2.522185 AGCATGCATTTCCAAGACACT 58.478 42.857 21.98 0.00 0.00 3.55
529 530 2.991190 CAAGCATGCATTTCCAAGACAC 59.009 45.455 21.98 0.00 0.00 3.67
530 531 2.028839 CCAAGCATGCATTTCCAAGACA 60.029 45.455 21.98 0.00 0.00 3.41
531 532 2.613691 CCAAGCATGCATTTCCAAGAC 58.386 47.619 21.98 0.00 0.00 3.01
532 533 1.066716 GCCAAGCATGCATTTCCAAGA 60.067 47.619 21.98 0.00 0.00 3.02
533 534 1.066430 AGCCAAGCATGCATTTCCAAG 60.066 47.619 21.98 0.36 0.00 3.61
534 535 0.978151 AGCCAAGCATGCATTTCCAA 59.022 45.000 21.98 0.00 0.00 3.53
535 536 0.248012 CAGCCAAGCATGCATTTCCA 59.752 50.000 21.98 0.00 0.00 3.53
536 537 0.533491 TCAGCCAAGCATGCATTTCC 59.467 50.000 21.98 3.86 0.00 3.13
537 538 1.475280 TCTCAGCCAAGCATGCATTTC 59.525 47.619 21.98 6.19 0.00 2.17
538 539 1.552578 TCTCAGCCAAGCATGCATTT 58.447 45.000 21.98 2.93 0.00 2.32
539 540 1.552578 TTCTCAGCCAAGCATGCATT 58.447 45.000 21.98 8.51 0.00 3.56
540 541 1.552578 TTTCTCAGCCAAGCATGCAT 58.447 45.000 21.98 4.57 0.00 3.96
541 542 1.330234 TTTTCTCAGCCAAGCATGCA 58.670 45.000 21.98 0.00 0.00 3.96
542 543 2.268298 CATTTTCTCAGCCAAGCATGC 58.732 47.619 10.51 10.51 0.00 4.06
543 544 2.418197 CCCATTTTCTCAGCCAAGCATG 60.418 50.000 0.00 0.00 0.00 4.06
544 545 1.829222 CCCATTTTCTCAGCCAAGCAT 59.171 47.619 0.00 0.00 0.00 3.79
545 546 1.259609 CCCATTTTCTCAGCCAAGCA 58.740 50.000 0.00 0.00 0.00 3.91
546 547 0.108472 GCCCATTTTCTCAGCCAAGC 60.108 55.000 0.00 0.00 0.00 4.01
547 548 0.533951 GGCCCATTTTCTCAGCCAAG 59.466 55.000 0.00 0.00 43.32 3.61
548 549 2.669878 GGCCCATTTTCTCAGCCAA 58.330 52.632 0.00 0.00 43.32 4.52
549 550 4.440145 GGCCCATTTTCTCAGCCA 57.560 55.556 0.00 0.00 43.32 4.75
550 551 1.197812 ATTGGCCCATTTTCTCAGCC 58.802 50.000 0.00 0.00 44.13 4.85
551 552 2.223900 GCTATTGGCCCATTTTCTCAGC 60.224 50.000 0.00 0.00 34.27 4.26
552 553 3.294214 AGCTATTGGCCCATTTTCTCAG 58.706 45.455 0.00 0.00 43.05 3.35
553 554 3.290710 GAGCTATTGGCCCATTTTCTCA 58.709 45.455 0.00 0.00 43.05 3.27
554 555 2.625314 GGAGCTATTGGCCCATTTTCTC 59.375 50.000 0.00 2.40 43.05 2.87
555 556 2.245806 AGGAGCTATTGGCCCATTTTCT 59.754 45.455 0.00 0.00 43.05 2.52
556 557 2.363359 CAGGAGCTATTGGCCCATTTTC 59.637 50.000 0.00 0.00 43.05 2.29
557 558 2.292455 ACAGGAGCTATTGGCCCATTTT 60.292 45.455 0.00 0.00 43.05 1.82
558 559 1.288932 ACAGGAGCTATTGGCCCATTT 59.711 47.619 0.00 0.00 43.05 2.32
559 560 0.929244 ACAGGAGCTATTGGCCCATT 59.071 50.000 0.00 0.00 43.05 3.16
606 607 0.858583 CACTCGAACAATGTCGCACA 59.141 50.000 0.00 0.00 40.88 4.57
614 615 2.485426 CACAGCCATTCACTCGAACAAT 59.515 45.455 0.00 0.00 32.81 2.71
934 935 2.159490 TCCATGGTTGGCAGGTGGA 61.159 57.895 12.58 7.77 43.29 4.02
1392 1393 6.822676 TGCCAATTTTCTTCAATTCACACTTT 59.177 30.769 0.00 0.00 0.00 2.66
2171 2179 0.105039 GCTATGGGTTGCTACGAGCT 59.895 55.000 8.07 0.00 42.97 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.