Multiple sequence alignment - TraesCS7A01G495900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G495900 chr7A 100.000 2873 0 0 1 2873 686104392 686107264 0.000000e+00 5306.0
1 TraesCS7A01G495900 chr7D 94.814 1774 69 11 587 2356 593268233 593269987 0.000000e+00 2745.0
2 TraesCS7A01G495900 chr7D 78.188 298 33 11 230 515 593267240 593267517 8.240000e-36 161.0
3 TraesCS7A01G495900 chr7B 94.387 1550 51 22 580 2117 667634114 667632589 0.000000e+00 2348.0
4 TraesCS7A01G495900 chr7B 87.311 331 36 5 2030 2356 667631882 667631554 9.720000e-100 374.0
5 TraesCS7A01G495900 chr7B 89.189 222 22 2 2135 2356 667632601 667632382 2.820000e-70 276.0
6 TraesCS7A01G495900 chr7B 81.379 290 24 9 230 513 667635106 667634841 2.900000e-50 209.0
7 TraesCS7A01G495900 chr3B 100.000 33 0 0 522 554 828146245 828146277 8.600000e-06 62.1
8 TraesCS7A01G495900 chr2D 94.286 35 1 1 673 706 529542507 529542541 5.000000e-03 52.8
9 TraesCS7A01G495900 chr1D 96.875 32 0 1 748 779 479795592 479795562 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G495900 chr7A 686104392 686107264 2872 False 5306.00 5306 100.0000 1 2873 1 chr7A.!!$F1 2872
1 TraesCS7A01G495900 chr7D 593267240 593269987 2747 False 1453.00 2745 86.5010 230 2356 2 chr7D.!!$F1 2126
2 TraesCS7A01G495900 chr7B 667631554 667635106 3552 True 801.75 2348 88.0665 230 2356 4 chr7B.!!$R1 2126

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 198 0.173481 TTGTTCTGATCCCGAGCTCG 59.827 55.0 29.06 29.06 39.44 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 3033 0.036164 TGGGTTTGACACGAGATGGG 59.964 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.381184 TGTGGCCCAACATAATGTATAGT 57.619 39.130 0.00 0.00 0.00 2.12
23 24 5.129634 TGTGGCCCAACATAATGTATAGTG 58.870 41.667 0.00 0.00 0.00 2.74
24 25 5.130350 GTGGCCCAACATAATGTATAGTGT 58.870 41.667 0.00 0.00 0.00 3.55
25 26 5.008613 GTGGCCCAACATAATGTATAGTGTG 59.991 44.000 0.00 0.00 0.00 3.82
26 27 5.104318 TGGCCCAACATAATGTATAGTGTGA 60.104 40.000 0.00 0.00 0.00 3.58
27 28 6.003950 GGCCCAACATAATGTATAGTGTGAT 58.996 40.000 0.00 0.00 0.00 3.06
28 29 6.490040 GGCCCAACATAATGTATAGTGTGATT 59.510 38.462 0.00 0.00 0.00 2.57
29 30 7.014230 GGCCCAACATAATGTATAGTGTGATTT 59.986 37.037 0.00 0.00 0.00 2.17
30 31 8.413229 GCCCAACATAATGTATAGTGTGATTTT 58.587 33.333 0.00 0.00 0.00 1.82
83 84 7.931015 AATTATTTAATTCCCTCTTTCCCCC 57.069 36.000 0.00 0.00 30.50 5.40
114 115 9.862149 ATTAAACTTCATAATTACTGGGGTAGG 57.138 33.333 0.00 0.00 0.00 3.18
115 116 5.906772 ACTTCATAATTACTGGGGTAGGG 57.093 43.478 0.00 0.00 0.00 3.53
116 117 5.294473 ACTTCATAATTACTGGGGTAGGGT 58.706 41.667 0.00 0.00 0.00 4.34
117 118 5.734634 ACTTCATAATTACTGGGGTAGGGTT 59.265 40.000 0.00 0.00 0.00 4.11
118 119 5.899631 TCATAATTACTGGGGTAGGGTTC 57.100 43.478 0.00 0.00 0.00 3.62
119 120 5.290335 TCATAATTACTGGGGTAGGGTTCA 58.710 41.667 0.00 0.00 0.00 3.18
120 121 5.914716 TCATAATTACTGGGGTAGGGTTCAT 59.085 40.000 0.00 0.00 0.00 2.57
121 122 4.519906 AATTACTGGGGTAGGGTTCATG 57.480 45.455 0.00 0.00 0.00 3.07
122 123 2.653543 TACTGGGGTAGGGTTCATGT 57.346 50.000 0.00 0.00 0.00 3.21
123 124 2.653543 ACTGGGGTAGGGTTCATGTA 57.346 50.000 0.00 0.00 0.00 2.29
124 125 3.145559 ACTGGGGTAGGGTTCATGTAT 57.854 47.619 0.00 0.00 0.00 2.29
125 126 3.046374 ACTGGGGTAGGGTTCATGTATC 58.954 50.000 0.00 0.00 0.00 2.24
126 127 3.045634 CTGGGGTAGGGTTCATGTATCA 58.954 50.000 0.00 0.00 0.00 2.15
127 128 3.458118 CTGGGGTAGGGTTCATGTATCAA 59.542 47.826 0.00 0.00 0.00 2.57
128 129 3.853181 TGGGGTAGGGTTCATGTATCAAA 59.147 43.478 0.00 0.00 0.00 2.69
129 130 4.080015 TGGGGTAGGGTTCATGTATCAAAG 60.080 45.833 0.00 0.00 0.00 2.77
130 131 3.883489 GGGTAGGGTTCATGTATCAAAGC 59.117 47.826 0.00 0.00 0.00 3.51
131 132 4.523083 GGTAGGGTTCATGTATCAAAGCA 58.477 43.478 0.00 0.00 0.00 3.91
132 133 4.947388 GGTAGGGTTCATGTATCAAAGCAA 59.053 41.667 0.00 0.00 0.00 3.91
133 134 5.417580 GGTAGGGTTCATGTATCAAAGCAAA 59.582 40.000 0.00 0.00 0.00 3.68
134 135 5.391312 AGGGTTCATGTATCAAAGCAAAC 57.609 39.130 0.00 0.00 0.00 2.93
135 136 4.832266 AGGGTTCATGTATCAAAGCAAACA 59.168 37.500 0.00 0.00 0.00 2.83
136 137 5.481473 AGGGTTCATGTATCAAAGCAAACAT 59.519 36.000 0.00 0.00 32.91 2.71
137 138 6.014327 AGGGTTCATGTATCAAAGCAAACATT 60.014 34.615 0.00 0.00 30.32 2.71
138 139 7.178274 AGGGTTCATGTATCAAAGCAAACATTA 59.822 33.333 0.00 0.00 30.32 1.90
139 140 7.981225 GGGTTCATGTATCAAAGCAAACATTAT 59.019 33.333 0.00 0.00 30.32 1.28
140 141 9.023967 GGTTCATGTATCAAAGCAAACATTATC 57.976 33.333 0.00 0.00 30.32 1.75
141 142 9.023967 GTTCATGTATCAAAGCAAACATTATCC 57.976 33.333 0.00 0.00 30.32 2.59
142 143 7.416817 TCATGTATCAAAGCAAACATTATCCG 58.583 34.615 0.00 0.00 30.32 4.18
143 144 6.751514 TGTATCAAAGCAAACATTATCCGT 57.248 33.333 0.00 0.00 0.00 4.69
144 145 7.851387 TGTATCAAAGCAAACATTATCCGTA 57.149 32.000 0.00 0.00 0.00 4.02
145 146 8.445275 TGTATCAAAGCAAACATTATCCGTAT 57.555 30.769 0.00 0.00 0.00 3.06
146 147 8.341903 TGTATCAAAGCAAACATTATCCGTATG 58.658 33.333 0.00 0.00 0.00 2.39
147 148 6.993786 TCAAAGCAAACATTATCCGTATGA 57.006 33.333 0.00 0.00 0.00 2.15
148 149 6.781138 TCAAAGCAAACATTATCCGTATGAC 58.219 36.000 0.00 0.00 0.00 3.06
149 150 6.597672 TCAAAGCAAACATTATCCGTATGACT 59.402 34.615 0.00 0.00 0.00 3.41
150 151 5.991328 AGCAAACATTATCCGTATGACTG 57.009 39.130 0.00 0.00 0.00 3.51
151 152 5.428253 AGCAAACATTATCCGTATGACTGT 58.572 37.500 0.00 0.00 0.00 3.55
152 153 6.578944 AGCAAACATTATCCGTATGACTGTA 58.421 36.000 0.00 0.00 0.00 2.74
153 154 7.217200 AGCAAACATTATCCGTATGACTGTAT 58.783 34.615 0.00 0.00 0.00 2.29
154 155 8.364894 AGCAAACATTATCCGTATGACTGTATA 58.635 33.333 0.00 0.00 0.00 1.47
155 156 9.151471 GCAAACATTATCCGTATGACTGTATAT 57.849 33.333 0.00 0.00 0.00 0.86
189 190 4.527564 CACGAAAAGTGTTGTTCTGATCC 58.472 43.478 0.00 0.00 45.51 3.36
190 191 3.564225 ACGAAAAGTGTTGTTCTGATCCC 59.436 43.478 0.00 0.00 0.00 3.85
191 192 3.363970 CGAAAAGTGTTGTTCTGATCCCG 60.364 47.826 0.00 0.00 0.00 5.14
192 193 3.485463 AAAGTGTTGTTCTGATCCCGA 57.515 42.857 0.00 0.00 0.00 5.14
193 194 2.751166 AGTGTTGTTCTGATCCCGAG 57.249 50.000 0.00 0.00 0.00 4.63
194 195 1.079503 GTGTTGTTCTGATCCCGAGC 58.920 55.000 0.00 0.00 0.00 5.03
195 196 0.976641 TGTTGTTCTGATCCCGAGCT 59.023 50.000 0.00 0.00 0.00 4.09
196 197 1.066858 TGTTGTTCTGATCCCGAGCTC 60.067 52.381 2.73 2.73 0.00 4.09
197 198 0.173481 TTGTTCTGATCCCGAGCTCG 59.827 55.000 29.06 29.06 39.44 5.03
208 209 3.075005 GAGCTCGGGTGGCCAGTA 61.075 66.667 5.11 0.00 0.00 2.74
209 210 2.606519 AGCTCGGGTGGCCAGTAA 60.607 61.111 5.11 0.00 0.00 2.24
210 211 2.180159 GAGCTCGGGTGGCCAGTAAA 62.180 60.000 5.11 0.00 0.00 2.01
211 212 1.302993 GCTCGGGTGGCCAGTAAAA 60.303 57.895 5.11 0.00 0.00 1.52
212 213 0.679960 GCTCGGGTGGCCAGTAAAAT 60.680 55.000 5.11 0.00 0.00 1.82
213 214 1.407712 GCTCGGGTGGCCAGTAAAATA 60.408 52.381 5.11 0.00 0.00 1.40
214 215 2.942306 GCTCGGGTGGCCAGTAAAATAA 60.942 50.000 5.11 0.00 0.00 1.40
215 216 3.349022 CTCGGGTGGCCAGTAAAATAAA 58.651 45.455 5.11 0.00 0.00 1.40
216 217 3.759618 CTCGGGTGGCCAGTAAAATAAAA 59.240 43.478 5.11 0.00 0.00 1.52
217 218 4.150359 TCGGGTGGCCAGTAAAATAAAAA 58.850 39.130 5.11 0.00 0.00 1.94
253 254 5.476752 TTTTGTGCCAAACATTGCTAAAC 57.523 34.783 0.52 0.00 38.99 2.01
258 259 3.799420 TGCCAAACATTGCTAAACGTTTC 59.201 39.130 18.42 4.68 29.40 2.78
264 265 4.472286 ACATTGCTAAACGTTTCGATTGG 58.528 39.130 18.42 7.38 0.00 3.16
276 277 5.064071 ACGTTTCGATTGGTTGCAAAATTTT 59.936 32.000 0.00 0.00 0.00 1.82
281 282 8.545229 TTCGATTGGTTGCAAAATTTTATCAT 57.455 26.923 0.00 0.00 0.00 2.45
294 295 7.403312 AAATTTTATCATCGGGTGACATTCA 57.597 32.000 0.00 0.00 40.28 2.57
295 296 7.587037 AATTTTATCATCGGGTGACATTCAT 57.413 32.000 0.00 0.00 40.28 2.57
296 297 6.375945 TTTTATCATCGGGTGACATTCATG 57.624 37.500 0.00 0.00 40.28 3.07
297 298 2.330440 TCATCGGGTGACATTCATGG 57.670 50.000 0.00 0.00 0.00 3.66
299 300 2.238395 TCATCGGGTGACATTCATGGAA 59.762 45.455 0.00 0.00 0.00 3.53
300 301 2.869101 TCGGGTGACATTCATGGAAA 57.131 45.000 0.00 0.00 0.00 3.13
302 303 3.278574 TCGGGTGACATTCATGGAAATC 58.721 45.455 0.00 0.00 0.00 2.17
304 305 3.016736 GGGTGACATTCATGGAAATCGT 58.983 45.455 0.00 0.00 0.00 3.73
305 306 3.181497 GGGTGACATTCATGGAAATCGTG 60.181 47.826 0.00 0.00 0.00 4.35
306 307 3.181497 GGTGACATTCATGGAAATCGTGG 60.181 47.826 0.00 0.00 33.31 4.94
307 308 2.423185 TGACATTCATGGAAATCGTGGC 59.577 45.455 0.00 0.00 33.31 5.01
308 309 2.423185 GACATTCATGGAAATCGTGGCA 59.577 45.455 0.00 0.00 33.31 4.92
309 310 2.824936 ACATTCATGGAAATCGTGGCAA 59.175 40.909 0.00 0.00 33.31 4.52
347 348 4.082125 CCAAGATGCTTTTTGGAGTACCT 58.918 43.478 14.78 0.00 45.32 3.08
348 349 4.082571 CCAAGATGCTTTTTGGAGTACCTG 60.083 45.833 14.78 0.00 45.32 4.00
349 350 4.373156 AGATGCTTTTTGGAGTACCTGT 57.627 40.909 0.00 0.00 37.04 4.00
350 351 4.729868 AGATGCTTTTTGGAGTACCTGTT 58.270 39.130 0.00 0.00 37.04 3.16
351 352 5.140454 AGATGCTTTTTGGAGTACCTGTTT 58.860 37.500 0.00 0.00 37.04 2.83
373 383 2.791383 TTGCCATGTTTTCCACGAAG 57.209 45.000 0.00 0.00 0.00 3.79
386 396 2.771372 TCCACGAAGATCATCCATTCCA 59.229 45.455 0.00 0.00 0.00 3.53
392 402 4.689812 CGAAGATCATCCATTCCAGTGATC 59.310 45.833 6.18 6.18 44.48 2.92
394 404 4.970711 AGATCATCCATTCCAGTGATCAC 58.029 43.478 18.47 18.47 45.81 3.06
412 422 4.362932 TCACACTTCGCAAACAATCAAA 57.637 36.364 0.00 0.00 0.00 2.69
413 423 4.738124 TCACACTTCGCAAACAATCAAAA 58.262 34.783 0.00 0.00 0.00 2.44
414 424 4.560819 TCACACTTCGCAAACAATCAAAAC 59.439 37.500 0.00 0.00 0.00 2.43
415 425 4.325741 CACACTTCGCAAACAATCAAAACA 59.674 37.500 0.00 0.00 0.00 2.83
416 426 5.005586 CACACTTCGCAAACAATCAAAACAT 59.994 36.000 0.00 0.00 0.00 2.71
417 427 5.580297 ACACTTCGCAAACAATCAAAACATT 59.420 32.000 0.00 0.00 0.00 2.71
418 428 6.091986 ACACTTCGCAAACAATCAAAACATTT 59.908 30.769 0.00 0.00 0.00 2.32
419 429 6.408611 CACTTCGCAAACAATCAAAACATTTG 59.591 34.615 0.00 0.00 34.17 2.32
420 430 6.091986 ACTTCGCAAACAATCAAAACATTTGT 59.908 30.769 3.06 0.00 35.19 2.83
421 431 7.276658 ACTTCGCAAACAATCAAAACATTTGTA 59.723 29.630 3.06 0.00 33.44 2.41
493 504 7.961326 AATTTTACTATTCACCCAAGCTCAT 57.039 32.000 0.00 0.00 0.00 2.90
515 527 0.174389 GAGCTCGGATCAGAACAGCA 59.826 55.000 0.00 0.00 32.17 4.41
516 528 0.610174 AGCTCGGATCAGAACAGCAA 59.390 50.000 7.99 0.00 32.17 3.91
576 1194 4.023707 GTGGTAGTAGTACGTGACAACACT 60.024 45.833 0.00 0.00 43.99 3.55
577 1195 4.580167 TGGTAGTAGTACGTGACAACACTT 59.420 41.667 0.00 0.00 43.99 3.16
644 1493 1.600636 CAGCGAGGCCCAAGAACAA 60.601 57.895 0.00 0.00 0.00 2.83
673 1522 1.363744 CAGGATCTGAAGCGGACAAC 58.636 55.000 0.00 0.00 32.44 3.32
807 1661 2.535331 GAGAAGTGGTCAGATCGAAGC 58.465 52.381 0.00 0.00 0.00 3.86
933 1791 1.071471 CACTGACACTCCACACCCC 59.929 63.158 0.00 0.00 0.00 4.95
934 1792 1.074471 ACTGACACTCCACACCCCT 60.074 57.895 0.00 0.00 0.00 4.79
1029 1890 0.321122 CGAAGCTCTCCTTGCTGGTT 60.321 55.000 0.00 0.00 41.03 3.67
1263 2130 4.719369 GCCGACGTCGACTGGCTT 62.719 66.667 37.65 3.70 44.16 4.35
1353 2220 4.789075 TACGACGCCGCCAAGCTC 62.789 66.667 0.00 0.00 39.95 4.09
1814 2681 2.124024 GCTGCAGGCCATGATGGA 60.124 61.111 17.22 0.00 40.96 3.41
1894 2762 3.497118 GTCGCAGATTAGATGAGATCGG 58.503 50.000 0.00 0.00 40.67 4.18
1898 2766 3.671971 GCAGATTAGATGAGATCGGTCGG 60.672 52.174 0.00 0.00 0.00 4.79
2063 2933 7.996644 TGTGTAAAATCTAGGGGATTATCCAAC 59.003 37.037 13.78 5.37 43.17 3.77
2070 2940 7.465900 TCTAGGGGATTATCCAACTTTTCAT 57.534 36.000 13.78 0.00 38.64 2.57
2094 2964 7.865706 TCCTTATTAGACTTCAAAATGGCTC 57.134 36.000 0.00 0.00 0.00 4.70
2125 2995 3.935828 GCCTCTAGTTCTCAACACCATTC 59.064 47.826 0.00 0.00 0.00 2.67
2133 3003 3.420893 TCTCAACACCATTCAATGTCCC 58.579 45.455 0.00 0.00 0.00 4.46
2160 3030 4.728102 TTCACGCTGTACCCGCCG 62.728 66.667 3.29 0.00 0.00 6.46
2203 3073 4.202202 CCAATCAAAGTAACACTGGCCAAA 60.202 41.667 7.01 0.00 0.00 3.28
2309 3179 6.787085 AAATTACAAGCTAGGATATGCGAC 57.213 37.500 0.00 0.00 0.00 5.19
2356 3226 3.577848 TGGCCAAAATTGACACTAGCAAT 59.422 39.130 0.61 0.00 37.56 3.56
2357 3227 4.176271 GGCCAAAATTGACACTAGCAATC 58.824 43.478 0.00 0.00 35.06 2.67
2358 3228 4.176271 GCCAAAATTGACACTAGCAATCC 58.824 43.478 0.00 0.00 35.06 3.01
2359 3229 4.321899 GCCAAAATTGACACTAGCAATCCA 60.322 41.667 0.00 0.00 35.06 3.41
2360 3230 5.782047 CCAAAATTGACACTAGCAATCCAA 58.218 37.500 0.00 0.00 35.06 3.53
2361 3231 6.222389 CCAAAATTGACACTAGCAATCCAAA 58.778 36.000 0.00 0.00 35.06 3.28
2364 3234 9.590451 CAAAATTGACACTAGCAATCCAAATAT 57.410 29.630 0.00 0.00 35.06 1.28
2365 3235 9.590451 AAAATTGACACTAGCAATCCAAATATG 57.410 29.630 0.00 0.00 35.06 1.78
2381 3251 6.503589 CAAATATGGTTCGGTTTGGACTTA 57.496 37.500 0.00 0.00 0.00 2.24
2382 3252 6.319399 CAAATATGGTTCGGTTTGGACTTAC 58.681 40.000 0.00 0.00 0.00 2.34
2383 3253 3.495434 ATGGTTCGGTTTGGACTTACA 57.505 42.857 0.00 0.00 0.00 2.41
2385 3255 3.618351 TGGTTCGGTTTGGACTTACAAA 58.382 40.909 0.00 0.00 37.96 2.83
2387 3257 4.645588 TGGTTCGGTTTGGACTTACAAAAT 59.354 37.500 0.00 0.00 41.53 1.82
2389 3259 5.217393 GTTCGGTTTGGACTTACAAAATCC 58.783 41.667 0.00 0.00 41.53 3.01
2390 3260 3.499157 TCGGTTTGGACTTACAAAATCCG 59.501 43.478 8.88 8.88 44.57 4.18
2392 3262 3.004944 GGTTTGGACTTACAAAATCCGCA 59.995 43.478 0.00 0.00 41.53 5.69
2393 3263 4.500035 GGTTTGGACTTACAAAATCCGCAA 60.500 41.667 0.00 0.00 41.53 4.85
2394 3264 4.497473 TTGGACTTACAAAATCCGCAAG 57.503 40.909 0.00 0.00 35.06 4.01
2395 3265 2.227865 TGGACTTACAAAATCCGCAAGC 59.772 45.455 0.00 0.00 35.06 4.01
2396 3266 2.415491 GGACTTACAAAATCCGCAAGCC 60.415 50.000 0.00 0.00 0.00 4.35
2397 3267 2.227865 GACTTACAAAATCCGCAAGCCA 59.772 45.455 0.00 0.00 0.00 4.75
2398 3268 2.625790 ACTTACAAAATCCGCAAGCCAA 59.374 40.909 0.00 0.00 0.00 4.52
2399 3269 3.244976 CTTACAAAATCCGCAAGCCAAG 58.755 45.455 0.00 0.00 0.00 3.61
2400 3270 1.039856 ACAAAATCCGCAAGCCAAGT 58.960 45.000 0.00 0.00 0.00 3.16
2402 3272 2.061028 CAAAATCCGCAAGCCAAGTTC 58.939 47.619 0.00 0.00 0.00 3.01
2403 3273 0.240945 AAATCCGCAAGCCAAGTTCG 59.759 50.000 0.00 0.00 0.00 3.95
2404 3274 0.889186 AATCCGCAAGCCAAGTTCGT 60.889 50.000 0.00 0.00 0.00 3.85
2406 3276 2.542907 CCGCAAGCCAAGTTCGTGT 61.543 57.895 0.00 0.00 0.00 4.49
2407 3277 1.355210 CGCAAGCCAAGTTCGTGTT 59.645 52.632 0.00 0.00 0.00 3.32
2408 3278 0.584396 CGCAAGCCAAGTTCGTGTTA 59.416 50.000 0.00 0.00 0.00 2.41
2409 3279 1.398451 CGCAAGCCAAGTTCGTGTTAG 60.398 52.381 0.00 0.00 0.00 2.34
2410 3280 1.602377 GCAAGCCAAGTTCGTGTTAGT 59.398 47.619 0.00 0.00 0.00 2.24
2413 3283 2.480845 AGCCAAGTTCGTGTTAGTCAC 58.519 47.619 0.00 0.00 43.03 3.67
2414 3284 2.102588 AGCCAAGTTCGTGTTAGTCACT 59.897 45.455 0.00 0.00 44.16 3.41
2415 3285 2.221055 GCCAAGTTCGTGTTAGTCACTG 59.779 50.000 0.00 0.00 44.16 3.66
2416 3286 2.221055 CCAAGTTCGTGTTAGTCACTGC 59.779 50.000 0.00 0.00 44.16 4.40
2417 3287 2.863740 CAAGTTCGTGTTAGTCACTGCA 59.136 45.455 0.00 0.00 44.16 4.41
2418 3288 3.386768 AGTTCGTGTTAGTCACTGCAT 57.613 42.857 0.00 0.00 44.16 3.96
2422 3292 5.065988 AGTTCGTGTTAGTCACTGCATTTTT 59.934 36.000 0.00 0.00 44.16 1.94
2423 3293 5.090652 TCGTGTTAGTCACTGCATTTTTC 57.909 39.130 0.00 0.00 44.16 2.29
2424 3294 4.572795 TCGTGTTAGTCACTGCATTTTTCA 59.427 37.500 0.00 0.00 44.16 2.69
2425 3295 5.065346 TCGTGTTAGTCACTGCATTTTTCAA 59.935 36.000 0.00 0.00 44.16 2.69
2426 3296 5.171337 CGTGTTAGTCACTGCATTTTTCAAC 59.829 40.000 0.00 0.00 44.16 3.18
2430 3300 5.581126 AGTCACTGCATTTTTCAACTTGA 57.419 34.783 0.00 0.00 0.00 3.02
2431 3301 6.152932 AGTCACTGCATTTTTCAACTTGAT 57.847 33.333 0.00 0.00 0.00 2.57
2432 3302 6.576185 AGTCACTGCATTTTTCAACTTGATT 58.424 32.000 0.00 0.00 0.00 2.57
2433 3303 7.043565 AGTCACTGCATTTTTCAACTTGATTT 58.956 30.769 0.00 0.00 0.00 2.17
2434 3304 8.196771 AGTCACTGCATTTTTCAACTTGATTTA 58.803 29.630 0.00 0.00 0.00 1.40
2435 3305 8.268738 GTCACTGCATTTTTCAACTTGATTTAC 58.731 33.333 0.00 0.00 0.00 2.01
2437 3307 6.420604 ACTGCATTTTTCAACTTGATTTACCG 59.579 34.615 0.00 0.00 0.00 4.02
2438 3308 6.507900 TGCATTTTTCAACTTGATTTACCGA 58.492 32.000 0.00 0.00 0.00 4.69
2439 3309 6.980978 TGCATTTTTCAACTTGATTTACCGAA 59.019 30.769 0.00 0.00 0.00 4.30
2441 3311 7.169140 GCATTTTTCAACTTGATTTACCGAAGT 59.831 33.333 0.00 0.00 0.00 3.01
2442 3312 7.979115 TTTTTCAACTTGATTTACCGAAGTG 57.021 32.000 0.00 0.00 30.33 3.16
2443 3313 6.687081 TTTCAACTTGATTTACCGAAGTGT 57.313 33.333 0.00 0.00 30.33 3.55
2445 3315 6.055231 TCAACTTGATTTACCGAAGTGTTG 57.945 37.500 0.00 0.00 35.15 3.33
2447 3317 6.316640 TCAACTTGATTTACCGAAGTGTTGAA 59.683 34.615 0.00 0.00 38.43 2.69
2449 3319 5.820947 ACTTGATTTACCGAAGTGTTGAAGT 59.179 36.000 0.00 0.00 0.00 3.01
2450 3320 6.317893 ACTTGATTTACCGAAGTGTTGAAGTT 59.682 34.615 0.00 0.00 0.00 2.66
2451 3321 6.055231 TGATTTACCGAAGTGTTGAAGTTG 57.945 37.500 0.00 0.00 0.00 3.16
2452 3322 3.955771 TTACCGAAGTGTTGAAGTTGC 57.044 42.857 0.00 0.00 0.00 4.17
2453 3323 0.655733 ACCGAAGTGTTGAAGTTGCG 59.344 50.000 0.00 0.00 0.00 4.85
2454 3324 0.655733 CCGAAGTGTTGAAGTTGCGT 59.344 50.000 0.00 0.00 0.00 5.24
2455 3325 1.063469 CCGAAGTGTTGAAGTTGCGTT 59.937 47.619 0.00 0.00 0.00 4.84
2456 3326 2.363220 CGAAGTGTTGAAGTTGCGTTC 58.637 47.619 0.00 0.00 0.00 3.95
2457 3327 2.030457 CGAAGTGTTGAAGTTGCGTTCT 59.970 45.455 0.00 0.00 0.00 3.01
2458 3328 3.485216 CGAAGTGTTGAAGTTGCGTTCTT 60.485 43.478 0.00 0.00 0.00 2.52
2459 3329 4.412207 GAAGTGTTGAAGTTGCGTTCTTT 58.588 39.130 0.00 0.00 0.00 2.52
2460 3330 4.016113 AGTGTTGAAGTTGCGTTCTTTC 57.984 40.909 0.00 0.00 0.00 2.62
2461 3331 3.105937 GTGTTGAAGTTGCGTTCTTTCC 58.894 45.455 0.00 0.00 0.00 3.13
2463 3333 3.181501 TGTTGAAGTTGCGTTCTTTCCTG 60.182 43.478 0.00 0.00 0.00 3.86
2464 3334 2.912771 TGAAGTTGCGTTCTTTCCTGA 58.087 42.857 0.00 0.00 0.00 3.86
2465 3335 3.476552 TGAAGTTGCGTTCTTTCCTGAT 58.523 40.909 0.00 0.00 0.00 2.90
2466 3336 3.250762 TGAAGTTGCGTTCTTTCCTGATG 59.749 43.478 0.00 0.00 0.00 3.07
2468 3338 3.476552 AGTTGCGTTCTTTCCTGATGAA 58.523 40.909 0.00 0.00 0.00 2.57
2469 3339 3.499918 AGTTGCGTTCTTTCCTGATGAAG 59.500 43.478 0.00 0.00 33.63 3.02
2477 3347 3.841078 CCTGATGAAGGGGTGGGT 58.159 61.111 0.00 0.00 43.15 4.51
2478 3348 1.304282 CCTGATGAAGGGGTGGGTG 59.696 63.158 0.00 0.00 43.15 4.61
2479 3349 1.500783 CCTGATGAAGGGGTGGGTGT 61.501 60.000 0.00 0.00 43.15 4.16
2480 3350 0.322816 CTGATGAAGGGGTGGGTGTG 60.323 60.000 0.00 0.00 0.00 3.82
2481 3351 0.770166 TGATGAAGGGGTGGGTGTGA 60.770 55.000 0.00 0.00 0.00 3.58
2482 3352 0.322546 GATGAAGGGGTGGGTGTGAC 60.323 60.000 0.00 0.00 0.00 3.67
2483 3353 0.772124 ATGAAGGGGTGGGTGTGACT 60.772 55.000 0.00 0.00 0.00 3.41
2484 3354 1.073199 GAAGGGGTGGGTGTGACTG 59.927 63.158 0.00 0.00 0.00 3.51
2485 3355 3.133365 AAGGGGTGGGTGTGACTGC 62.133 63.158 0.00 0.00 0.00 4.40
2486 3356 3.570212 GGGGTGGGTGTGACTGCT 61.570 66.667 0.00 0.00 0.00 4.24
2487 3357 2.281761 GGGTGGGTGTGACTGCTG 60.282 66.667 0.00 0.00 0.00 4.41
2488 3358 2.980233 GGTGGGTGTGACTGCTGC 60.980 66.667 0.00 0.00 0.00 5.25
2490 3360 2.111669 TGGGTGTGACTGCTGCTG 59.888 61.111 4.89 4.89 0.00 4.41
2491 3361 2.111878 GGGTGTGACTGCTGCTGT 59.888 61.111 12.15 12.15 0.00 4.40
2494 3364 1.611673 GGGTGTGACTGCTGCTGTAAT 60.612 52.381 12.29 0.00 0.00 1.89
2495 3365 2.354704 GGGTGTGACTGCTGCTGTAATA 60.355 50.000 12.29 0.59 0.00 0.98
2497 3367 3.372206 GGTGTGACTGCTGCTGTAATAAG 59.628 47.826 12.29 0.00 0.00 1.73
2498 3368 4.245660 GTGTGACTGCTGCTGTAATAAGA 58.754 43.478 12.29 0.00 0.00 2.10
2499 3369 4.328440 GTGTGACTGCTGCTGTAATAAGAG 59.672 45.833 12.29 0.00 0.00 2.85
2501 3371 5.105187 TGTGACTGCTGCTGTAATAAGAGAT 60.105 40.000 12.29 0.00 0.00 2.75
2502 3372 5.233902 GTGACTGCTGCTGTAATAAGAGATG 59.766 44.000 12.29 0.00 0.00 2.90
2504 3374 5.355596 ACTGCTGCTGTAATAAGAGATGAC 58.644 41.667 10.61 0.00 0.00 3.06
2505 3375 5.105187 ACTGCTGCTGTAATAAGAGATGACA 60.105 40.000 10.61 0.00 0.00 3.58
2506 3376 5.354767 TGCTGCTGTAATAAGAGATGACAG 58.645 41.667 0.00 0.00 40.39 3.51
2507 3377 4.749099 GCTGCTGTAATAAGAGATGACAGG 59.251 45.833 4.57 0.00 38.35 4.00
2508 3378 5.282055 TGCTGTAATAAGAGATGACAGGG 57.718 43.478 4.57 0.00 38.35 4.45
2509 3379 4.101585 TGCTGTAATAAGAGATGACAGGGG 59.898 45.833 4.57 0.00 38.35 4.79
2510 3380 4.101741 GCTGTAATAAGAGATGACAGGGGT 59.898 45.833 4.57 0.00 38.35 4.95
2511 3381 5.304614 GCTGTAATAAGAGATGACAGGGGTA 59.695 44.000 4.57 0.00 38.35 3.69
2512 3382 6.183360 GCTGTAATAAGAGATGACAGGGGTAA 60.183 42.308 4.57 0.00 38.35 2.85
2513 3383 7.361457 TGTAATAAGAGATGACAGGGGTAAG 57.639 40.000 0.00 0.00 0.00 2.34
2515 3385 6.893020 AATAAGAGATGACAGGGGTAAGTT 57.107 37.500 0.00 0.00 0.00 2.66
2516 3386 6.893020 ATAAGAGATGACAGGGGTAAGTTT 57.107 37.500 0.00 0.00 0.00 2.66
2518 3388 6.697641 AAGAGATGACAGGGGTAAGTTTTA 57.302 37.500 0.00 0.00 0.00 1.52
2519 3389 6.893020 AGAGATGACAGGGGTAAGTTTTAT 57.107 37.500 0.00 0.00 0.00 1.40
2520 3390 6.653989 AGAGATGACAGGGGTAAGTTTTATG 58.346 40.000 0.00 0.00 0.00 1.90
2521 3391 5.193679 AGATGACAGGGGTAAGTTTTATGC 58.806 41.667 0.00 0.00 0.00 3.14
2522 3392 4.374689 TGACAGGGGTAAGTTTTATGCA 57.625 40.909 0.00 0.00 0.00 3.96
2523 3393 4.331968 TGACAGGGGTAAGTTTTATGCAG 58.668 43.478 0.00 0.00 0.00 4.41
2526 3396 3.129287 CAGGGGTAAGTTTTATGCAGCTG 59.871 47.826 10.11 10.11 0.00 4.24
2528 3398 3.128764 GGGGTAAGTTTTATGCAGCTGAC 59.871 47.826 20.43 9.67 0.00 3.51
2530 3400 3.435671 GGTAAGTTTTATGCAGCTGACGT 59.564 43.478 20.43 12.72 0.00 4.34
2532 3402 2.766313 AGTTTTATGCAGCTGACGTGA 58.234 42.857 20.43 4.30 0.00 4.35
2533 3403 3.338249 AGTTTTATGCAGCTGACGTGAT 58.662 40.909 20.43 2.96 0.00 3.06
2535 3405 2.671130 TTATGCAGCTGACGTGATCA 57.329 45.000 20.43 3.86 35.45 2.92
2536 3406 1.926561 TATGCAGCTGACGTGATCAC 58.073 50.000 20.43 16.21 32.37 3.06
2537 3407 0.248565 ATGCAGCTGACGTGATCACT 59.751 50.000 22.95 10.54 32.37 3.41
2538 3408 0.887933 TGCAGCTGACGTGATCACTA 59.112 50.000 22.95 8.89 32.37 2.74
2539 3409 1.272781 GCAGCTGACGTGATCACTAC 58.727 55.000 22.95 16.15 32.37 2.73
2540 3410 1.402852 GCAGCTGACGTGATCACTACA 60.403 52.381 22.95 19.34 32.37 2.74
2543 3413 2.820197 AGCTGACGTGATCACTACAGAA 59.180 45.455 32.99 13.48 35.67 3.02
2544 3414 3.119673 AGCTGACGTGATCACTACAGAAG 60.120 47.826 32.99 20.10 35.67 2.85
2545 3415 3.175152 CTGACGTGATCACTACAGAAGC 58.825 50.000 28.81 11.37 35.67 3.86
2546 3416 2.177977 GACGTGATCACTACAGAAGCG 58.822 52.381 22.95 9.40 0.00 4.68
2547 3417 1.810755 ACGTGATCACTACAGAAGCGA 59.189 47.619 22.95 0.00 0.00 4.93
2548 3418 2.423892 ACGTGATCACTACAGAAGCGAT 59.576 45.455 22.95 0.00 29.42 4.58
2549 3419 2.786027 CGTGATCACTACAGAAGCGATG 59.214 50.000 22.95 0.00 26.84 3.84
2550 3420 3.119291 GTGATCACTACAGAAGCGATGG 58.881 50.000 18.83 0.00 26.84 3.51
2551 3421 2.131183 GATCACTACAGAAGCGATGGC 58.869 52.381 0.00 0.00 40.37 4.40
2552 3422 0.175760 TCACTACAGAAGCGATGGCC 59.824 55.000 0.00 0.00 41.24 5.36
2555 3425 1.224075 CTACAGAAGCGATGGCCATG 58.776 55.000 26.56 16.49 41.24 3.66
2556 3426 0.829990 TACAGAAGCGATGGCCATGA 59.170 50.000 26.56 0.00 41.24 3.07
2557 3427 0.463295 ACAGAAGCGATGGCCATGAG 60.463 55.000 26.56 18.04 41.24 2.90
2559 3429 0.106335 AGAAGCGATGGCCATGAGAG 59.894 55.000 26.56 12.65 41.24 3.20
2561 3431 0.763652 AAGCGATGGCCATGAGAGAT 59.236 50.000 26.56 7.53 41.24 2.75
2562 3432 0.035036 AGCGATGGCCATGAGAGATG 59.965 55.000 26.56 4.79 41.24 2.90
2568 3438 1.964552 GGCCATGAGAGATGGACTTG 58.035 55.000 0.00 0.00 43.87 3.16
2569 3439 1.307097 GCCATGAGAGATGGACTTGC 58.693 55.000 4.83 0.00 41.64 4.01
2570 3440 1.964552 CCATGAGAGATGGACTTGCC 58.035 55.000 0.00 0.00 41.64 4.52
2571 3441 1.476471 CCATGAGAGATGGACTTGCCC 60.476 57.143 0.00 0.00 41.64 5.36
2572 3442 1.489649 CATGAGAGATGGACTTGCCCT 59.510 52.381 0.00 0.00 34.97 5.19
2573 3443 1.661463 TGAGAGATGGACTTGCCCTT 58.339 50.000 0.00 0.00 34.97 3.95
2574 3444 1.280133 TGAGAGATGGACTTGCCCTTG 59.720 52.381 0.00 0.00 34.97 3.61
2577 3447 1.210478 GAGATGGACTTGCCCTTGCTA 59.790 52.381 0.00 0.00 38.71 3.49
2578 3448 1.635487 AGATGGACTTGCCCTTGCTAA 59.365 47.619 0.00 0.00 38.71 3.09
2579 3449 1.745653 GATGGACTTGCCCTTGCTAAC 59.254 52.381 0.00 0.00 38.71 2.34
2580 3450 0.771127 TGGACTTGCCCTTGCTAACT 59.229 50.000 0.00 0.00 38.71 2.24
2581 3451 1.271379 TGGACTTGCCCTTGCTAACTC 60.271 52.381 0.00 0.00 38.71 3.01
2582 3452 1.003696 GGACTTGCCCTTGCTAACTCT 59.996 52.381 0.00 0.00 38.71 3.24
2583 3453 2.351455 GACTTGCCCTTGCTAACTCTC 58.649 52.381 0.00 0.00 38.71 3.20
2584 3454 1.981495 ACTTGCCCTTGCTAACTCTCT 59.019 47.619 0.00 0.00 38.71 3.10
2586 3456 2.479566 TGCCCTTGCTAACTCTCTTG 57.520 50.000 0.00 0.00 38.71 3.02
2587 3457 1.003580 TGCCCTTGCTAACTCTCTTGG 59.996 52.381 0.00 0.00 38.71 3.61
2588 3458 1.680249 GCCCTTGCTAACTCTCTTGGG 60.680 57.143 0.00 0.00 36.63 4.12
2589 3459 1.630878 CCCTTGCTAACTCTCTTGGGT 59.369 52.381 0.00 0.00 0.00 4.51
2591 3461 3.498661 CCCTTGCTAACTCTCTTGGGTTT 60.499 47.826 0.00 0.00 0.00 3.27
2593 3463 5.313712 CCTTGCTAACTCTCTTGGGTTTAA 58.686 41.667 0.00 0.00 0.00 1.52
2594 3464 5.946377 CCTTGCTAACTCTCTTGGGTTTAAT 59.054 40.000 0.00 0.00 0.00 1.40
2595 3465 6.434340 CCTTGCTAACTCTCTTGGGTTTAATT 59.566 38.462 0.00 0.00 0.00 1.40
2596 3466 6.817765 TGCTAACTCTCTTGGGTTTAATTG 57.182 37.500 0.00 0.00 0.00 2.32
2597 3467 5.710099 TGCTAACTCTCTTGGGTTTAATTGG 59.290 40.000 0.00 0.00 0.00 3.16
2598 3468 5.393135 GCTAACTCTCTTGGGTTTAATTGGC 60.393 44.000 0.00 0.00 0.00 4.52
2599 3469 4.388577 ACTCTCTTGGGTTTAATTGGCT 57.611 40.909 0.00 0.00 0.00 4.75
2600 3470 4.336280 ACTCTCTTGGGTTTAATTGGCTC 58.664 43.478 0.00 0.00 0.00 4.70
2601 3471 3.343617 TCTCTTGGGTTTAATTGGCTCG 58.656 45.455 0.00 0.00 0.00 5.03
2602 3472 3.008594 TCTCTTGGGTTTAATTGGCTCGA 59.991 43.478 0.00 0.00 0.00 4.04
2603 3473 3.343617 TCTTGGGTTTAATTGGCTCGAG 58.656 45.455 8.45 8.45 0.00 4.04
2604 3474 2.122783 TGGGTTTAATTGGCTCGAGG 57.877 50.000 15.58 0.00 0.00 4.63
2605 3475 0.738975 GGGTTTAATTGGCTCGAGGC 59.261 55.000 30.53 30.53 41.50 4.70
2608 3478 2.273557 GTTTAATTGGCTCGAGGCGTA 58.726 47.619 30.84 22.46 44.42 4.42
2609 3479 2.218953 TTAATTGGCTCGAGGCGTAG 57.781 50.000 30.84 0.00 44.42 3.51
2610 3480 1.108776 TAATTGGCTCGAGGCGTAGT 58.891 50.000 30.84 22.73 44.42 2.73
2611 3481 0.179108 AATTGGCTCGAGGCGTAGTC 60.179 55.000 30.84 4.97 44.42 2.59
2612 3482 2.337749 ATTGGCTCGAGGCGTAGTCG 62.338 60.000 30.84 0.00 44.42 4.18
2613 3483 4.253257 GGCTCGAGGCGTAGTCGG 62.253 72.222 24.18 0.00 42.94 4.79
2616 3486 2.023318 CTCGAGGCGTAGTCGGATT 58.977 57.895 3.91 0.00 36.95 3.01
2617 3487 0.041135 CTCGAGGCGTAGTCGGATTC 60.041 60.000 3.91 0.00 36.95 2.52
2618 3488 1.008767 CGAGGCGTAGTCGGATTCC 60.009 63.158 0.00 0.00 36.95 3.01
2619 3489 1.445716 CGAGGCGTAGTCGGATTCCT 61.446 60.000 0.30 0.00 36.95 3.36
2620 3490 0.745468 GAGGCGTAGTCGGATTCCTT 59.255 55.000 0.30 0.00 36.95 3.36
2621 3491 1.952296 GAGGCGTAGTCGGATTCCTTA 59.048 52.381 0.30 0.00 36.95 2.69
2622 3492 1.680207 AGGCGTAGTCGGATTCCTTAC 59.320 52.381 0.30 0.00 36.95 2.34
2623 3493 1.269465 GGCGTAGTCGGATTCCTTACC 60.269 57.143 0.30 0.00 37.56 2.85
2625 3495 2.035576 GCGTAGTCGGATTCCTTACCAT 59.964 50.000 0.30 0.00 37.56 3.55
2626 3496 3.856267 GCGTAGTCGGATTCCTTACCATC 60.856 52.174 0.30 0.00 37.56 3.51
2627 3497 3.305199 CGTAGTCGGATTCCTTACCATCC 60.305 52.174 0.30 0.00 36.35 3.51
2628 3498 2.759355 AGTCGGATTCCTTACCATCCA 58.241 47.619 0.30 0.00 39.29 3.41
2630 3500 4.489737 AGTCGGATTCCTTACCATCCATA 58.510 43.478 0.30 0.00 39.29 2.74
2631 3501 4.905456 AGTCGGATTCCTTACCATCCATAA 59.095 41.667 0.30 0.00 39.29 1.90
2633 3503 6.044404 AGTCGGATTCCTTACCATCCATAATT 59.956 38.462 0.30 0.00 39.29 1.40
2634 3504 6.715264 GTCGGATTCCTTACCATCCATAATTT 59.285 38.462 0.30 0.00 39.29 1.82
2636 3506 7.230510 TCGGATTCCTTACCATCCATAATTTTG 59.769 37.037 0.30 0.00 39.29 2.44
2637 3507 7.014230 CGGATTCCTTACCATCCATAATTTTGT 59.986 37.037 0.30 0.00 39.29 2.83
2638 3508 8.143835 GGATTCCTTACCATCCATAATTTTGTG 58.856 37.037 0.00 0.00 39.16 3.33
2639 3509 6.463995 TCCTTACCATCCATAATTTTGTGC 57.536 37.500 0.00 0.00 0.00 4.57
2641 3511 6.042143 CCTTACCATCCATAATTTTGTGCAC 58.958 40.000 10.75 10.75 0.00 4.57
2642 3512 6.127366 CCTTACCATCCATAATTTTGTGCACT 60.127 38.462 19.41 0.00 0.00 4.40
2643 3513 5.075858 ACCATCCATAATTTTGTGCACTG 57.924 39.130 19.41 5.69 0.00 3.66
2644 3514 4.081531 ACCATCCATAATTTTGTGCACTGG 60.082 41.667 19.41 15.08 0.00 4.00
2645 3515 4.435425 CATCCATAATTTTGTGCACTGGG 58.565 43.478 19.41 7.71 0.00 4.45
2646 3516 2.233431 TCCATAATTTTGTGCACTGGGC 59.767 45.455 19.41 0.00 45.13 5.36
2655 3525 4.972875 GCACTGGGCAAGCTAGAT 57.027 55.556 0.00 0.00 43.97 1.98
2656 3526 2.401967 GCACTGGGCAAGCTAGATG 58.598 57.895 0.00 0.00 43.97 2.90
2657 3527 1.099879 GCACTGGGCAAGCTAGATGG 61.100 60.000 0.00 0.00 43.97 3.51
2658 3528 0.254178 CACTGGGCAAGCTAGATGGT 59.746 55.000 0.00 0.00 0.00 3.55
2659 3529 0.254178 ACTGGGCAAGCTAGATGGTG 59.746 55.000 0.00 0.00 0.00 4.17
2661 3531 1.152881 GGGCAAGCTAGATGGTGGG 60.153 63.158 0.00 0.00 0.00 4.61
2662 3532 1.635817 GGGCAAGCTAGATGGTGGGA 61.636 60.000 0.00 0.00 0.00 4.37
2664 3534 1.602311 GCAAGCTAGATGGTGGGATG 58.398 55.000 0.00 0.00 0.00 3.51
2666 3536 0.107456 AAGCTAGATGGTGGGATGCG 59.893 55.000 0.00 0.00 0.00 4.73
2667 3537 1.302033 GCTAGATGGTGGGATGCGG 60.302 63.158 0.00 0.00 0.00 5.69
2668 3538 2.044806 GCTAGATGGTGGGATGCGGT 62.045 60.000 0.00 0.00 0.00 5.68
2669 3539 1.338107 CTAGATGGTGGGATGCGGTA 58.662 55.000 0.00 0.00 0.00 4.02
2671 3541 0.180406 AGATGGTGGGATGCGGTAAC 59.820 55.000 0.00 0.00 0.00 2.50
2672 3542 0.107410 GATGGTGGGATGCGGTAACA 60.107 55.000 0.00 0.00 0.00 2.41
2673 3543 0.329931 ATGGTGGGATGCGGTAACAA 59.670 50.000 0.00 0.00 0.00 2.83
2675 3545 0.606944 GGTGGGATGCGGTAACAACA 60.607 55.000 0.00 0.00 0.00 3.33
2676 3546 1.240256 GTGGGATGCGGTAACAACAA 58.760 50.000 0.00 0.00 0.00 2.83
2677 3547 1.816224 GTGGGATGCGGTAACAACAAT 59.184 47.619 0.00 0.00 0.00 2.71
2678 3548 2.230266 GTGGGATGCGGTAACAACAATT 59.770 45.455 0.00 0.00 0.00 2.32
2679 3549 2.894126 TGGGATGCGGTAACAACAATTT 59.106 40.909 0.00 0.00 0.00 1.82
2680 3550 3.322254 TGGGATGCGGTAACAACAATTTT 59.678 39.130 0.00 0.00 0.00 1.82
2681 3551 4.202264 TGGGATGCGGTAACAACAATTTTT 60.202 37.500 0.00 0.00 0.00 1.94
2682 3552 4.151512 GGGATGCGGTAACAACAATTTTTG 59.848 41.667 2.77 2.77 0.00 2.44
2684 3554 3.521560 TGCGGTAACAACAATTTTTGCA 58.478 36.364 4.23 0.00 0.00 4.08
2686 3556 3.799420 GCGGTAACAACAATTTTTGCAGA 59.201 39.130 4.23 0.00 0.00 4.26
2687 3557 4.268884 GCGGTAACAACAATTTTTGCAGAA 59.731 37.500 4.23 0.00 0.00 3.02
2688 3558 5.050431 GCGGTAACAACAATTTTTGCAGAAT 60.050 36.000 4.23 0.00 0.00 2.40
2689 3559 6.354080 CGGTAACAACAATTTTTGCAGAATG 58.646 36.000 4.23 0.00 40.87 2.67
2692 3562 6.740411 AACAACAATTTTTGCAGAATGTGT 57.260 29.167 4.23 0.00 39.31 3.72
2693 3563 6.109320 ACAACAATTTTTGCAGAATGTGTG 57.891 33.333 4.23 5.93 39.31 3.82
2694 3564 5.064962 ACAACAATTTTTGCAGAATGTGTGG 59.935 36.000 4.23 6.60 39.31 4.17
2696 3566 2.237393 TTTTTGCAGAATGTGTGGGC 57.763 45.000 0.00 0.00 39.31 5.36
2697 3567 1.412079 TTTTGCAGAATGTGTGGGCT 58.588 45.000 0.00 0.00 39.31 5.19
2698 3568 1.412079 TTTGCAGAATGTGTGGGCTT 58.588 45.000 0.00 0.00 39.31 4.35
2699 3569 2.284754 TTGCAGAATGTGTGGGCTTA 57.715 45.000 0.00 0.00 39.31 3.09
2700 3570 1.825090 TGCAGAATGTGTGGGCTTAG 58.175 50.000 0.00 0.00 39.31 2.18
2704 3574 3.270877 CAGAATGTGTGGGCTTAGGTAC 58.729 50.000 0.00 0.00 0.00 3.34
2706 3576 3.587506 AGAATGTGTGGGCTTAGGTACTT 59.412 43.478 0.00 0.00 41.75 2.24
2707 3577 4.042934 AGAATGTGTGGGCTTAGGTACTTT 59.957 41.667 0.00 0.00 41.75 2.66
2709 3579 2.706723 TGTGTGGGCTTAGGTACTTTGA 59.293 45.455 0.00 0.00 41.75 2.69
2710 3580 3.329520 TGTGTGGGCTTAGGTACTTTGAT 59.670 43.478 0.00 0.00 41.75 2.57
2711 3581 4.202524 TGTGTGGGCTTAGGTACTTTGATT 60.203 41.667 0.00 0.00 41.75 2.57
2712 3582 4.156008 GTGTGGGCTTAGGTACTTTGATTG 59.844 45.833 0.00 0.00 41.75 2.67
2713 3583 3.694566 GTGGGCTTAGGTACTTTGATTGG 59.305 47.826 0.00 0.00 41.75 3.16
2714 3584 3.589735 TGGGCTTAGGTACTTTGATTGGA 59.410 43.478 0.00 0.00 41.75 3.53
2715 3585 4.043561 TGGGCTTAGGTACTTTGATTGGAA 59.956 41.667 0.00 0.00 41.75 3.53
2717 3587 5.067805 GGGCTTAGGTACTTTGATTGGAATG 59.932 44.000 0.00 0.00 41.75 2.67
2719 3589 5.450550 GCTTAGGTACTTTGATTGGAATGCC 60.451 44.000 0.00 0.00 41.75 4.40
2720 3590 4.046286 AGGTACTTTGATTGGAATGCCA 57.954 40.909 0.00 0.00 37.87 4.92
2721 3591 4.613437 AGGTACTTTGATTGGAATGCCAT 58.387 39.130 0.00 0.00 39.42 4.40
2722 3592 5.025453 AGGTACTTTGATTGGAATGCCATT 58.975 37.500 0.00 0.00 39.42 3.16
2723 3593 5.484998 AGGTACTTTGATTGGAATGCCATTT 59.515 36.000 0.00 0.00 39.42 2.32
2724 3594 6.013466 AGGTACTTTGATTGGAATGCCATTTT 60.013 34.615 0.00 0.00 39.42 1.82
2725 3595 6.313658 GGTACTTTGATTGGAATGCCATTTTC 59.686 38.462 0.00 0.00 45.46 2.29
2727 3597 6.297582 ACTTTGATTGGAATGCCATTTTCAA 58.702 32.000 0.00 1.03 45.46 2.69
2728 3598 6.428771 ACTTTGATTGGAATGCCATTTTCAAG 59.571 34.615 11.23 5.82 45.46 3.02
2749 3619 7.393551 CAAGCATTGTTTTCGTTCTTGTAAT 57.606 32.000 0.00 0.00 42.34 1.89
2750 3620 6.991485 AGCATTGTTTTCGTTCTTGTAATG 57.009 33.333 0.00 0.00 0.00 1.90
2751 3621 5.920273 AGCATTGTTTTCGTTCTTGTAATGG 59.080 36.000 0.00 0.00 0.00 3.16
2752 3622 5.689961 GCATTGTTTTCGTTCTTGTAATGGT 59.310 36.000 0.00 0.00 0.00 3.55
2753 3623 6.129194 GCATTGTTTTCGTTCTTGTAATGGTC 60.129 38.462 0.00 0.00 0.00 4.02
2756 3626 6.434596 TGTTTTCGTTCTTGTAATGGTCATG 58.565 36.000 0.00 0.00 0.00 3.07
2757 3627 6.038825 TGTTTTCGTTCTTGTAATGGTCATGT 59.961 34.615 0.00 0.00 0.00 3.21
2758 3628 5.605564 TTCGTTCTTGTAATGGTCATGTG 57.394 39.130 0.00 0.00 0.00 3.21
2759 3629 3.435327 TCGTTCTTGTAATGGTCATGTGC 59.565 43.478 0.00 0.00 0.00 4.57
2760 3630 3.436704 CGTTCTTGTAATGGTCATGTGCT 59.563 43.478 0.00 0.00 0.00 4.40
2762 3632 5.220472 CGTTCTTGTAATGGTCATGTGCTAG 60.220 44.000 0.00 0.00 0.00 3.42
2764 3634 3.625649 TGTAATGGTCATGTGCTAGCA 57.374 42.857 14.93 14.93 0.00 3.49
2766 3636 4.525996 TGTAATGGTCATGTGCTAGCAAT 58.474 39.130 21.29 12.40 0.00 3.56
2768 3638 5.418524 TGTAATGGTCATGTGCTAGCAATTT 59.581 36.000 21.29 4.07 0.00 1.82
2769 3639 5.410355 AATGGTCATGTGCTAGCAATTTT 57.590 34.783 21.29 1.25 0.00 1.82
2770 3640 4.439305 TGGTCATGTGCTAGCAATTTTC 57.561 40.909 21.29 7.20 0.00 2.29
2771 3641 3.825585 TGGTCATGTGCTAGCAATTTTCA 59.174 39.130 21.29 13.38 0.00 2.69
2773 3643 4.082571 GGTCATGTGCTAGCAATTTTCAGT 60.083 41.667 21.29 0.70 0.00 3.41
2774 3644 5.464168 GTCATGTGCTAGCAATTTTCAGTT 58.536 37.500 21.29 0.00 0.00 3.16
2775 3645 6.349280 GGTCATGTGCTAGCAATTTTCAGTTA 60.349 38.462 21.29 0.00 0.00 2.24
2776 3646 7.253422 GTCATGTGCTAGCAATTTTCAGTTAT 58.747 34.615 21.29 0.00 0.00 1.89
2777 3647 7.756722 GTCATGTGCTAGCAATTTTCAGTTATT 59.243 33.333 21.29 0.00 0.00 1.40
2779 3649 6.980593 TGTGCTAGCAATTTTCAGTTATTGT 58.019 32.000 21.29 0.00 34.88 2.71
2780 3650 8.105097 TGTGCTAGCAATTTTCAGTTATTGTA 57.895 30.769 21.29 0.00 34.88 2.41
2781 3651 8.572185 TGTGCTAGCAATTTTCAGTTATTGTAA 58.428 29.630 21.29 0.00 34.88 2.41
2782 3652 9.573133 GTGCTAGCAATTTTCAGTTATTGTAAT 57.427 29.630 21.29 0.00 34.88 1.89
2787 3657 9.586435 AGCAATTTTCAGTTATTGTAATAAGGC 57.414 29.630 0.00 0.00 34.88 4.35
2788 3658 9.586435 GCAATTTTCAGTTATTGTAATAAGGCT 57.414 29.630 0.00 0.00 34.88 4.58
2801 3671 9.749340 ATTGTAATAAGGCTACTTTTAGTTGGT 57.251 29.630 0.00 0.00 38.14 3.67
2804 3674 7.462571 AATAAGGCTACTTTTAGTTGGTTGG 57.537 36.000 0.00 0.00 38.14 3.77
2806 3676 4.395625 AGGCTACTTTTAGTTGGTTGGAC 58.604 43.478 0.00 0.00 0.00 4.02
2809 3679 4.151867 GCTACTTTTAGTTGGTTGGACGAG 59.848 45.833 0.00 0.00 0.00 4.18
2811 3681 1.886886 TTTAGTTGGTTGGACGAGCC 58.113 50.000 0.00 0.00 37.10 4.70
2812 3682 1.053424 TTAGTTGGTTGGACGAGCCT 58.947 50.000 0.00 0.00 37.63 4.58
2813 3683 0.606604 TAGTTGGTTGGACGAGCCTC 59.393 55.000 0.00 0.00 37.63 4.70
2814 3684 1.070786 GTTGGTTGGACGAGCCTCA 59.929 57.895 0.00 0.00 37.63 3.86
2815 3685 0.534203 GTTGGTTGGACGAGCCTCAA 60.534 55.000 0.00 0.00 37.63 3.02
2817 3687 0.181587 TGGTTGGACGAGCCTCAAAA 59.818 50.000 0.00 0.00 37.63 2.44
2820 3690 0.881118 TTGGACGAGCCTCAAAATGC 59.119 50.000 0.00 0.00 37.63 3.56
2821 3691 1.298157 TGGACGAGCCTCAAAATGCG 61.298 55.000 0.00 0.00 37.63 4.73
2822 3692 1.226128 GACGAGCCTCAAAATGCGC 60.226 57.895 0.00 0.00 0.00 6.09
2823 3693 2.100991 CGAGCCTCAAAATGCGCC 59.899 61.111 4.18 0.00 0.00 6.53
2824 3694 2.491621 GAGCCTCAAAATGCGCCC 59.508 61.111 4.18 0.00 0.00 6.13
2826 3696 2.182537 GCCTCAAAATGCGCCCTG 59.817 61.111 4.18 0.00 0.00 4.45
2828 3698 1.508088 CCTCAAAATGCGCCCTGTC 59.492 57.895 4.18 0.00 0.00 3.51
2829 3699 1.508088 CTCAAAATGCGCCCTGTCC 59.492 57.895 4.18 0.00 0.00 4.02
2830 3700 0.962356 CTCAAAATGCGCCCTGTCCT 60.962 55.000 4.18 0.00 0.00 3.85
2831 3701 1.213537 CAAAATGCGCCCTGTCCTG 59.786 57.895 4.18 0.00 0.00 3.86
2832 3702 1.228552 AAAATGCGCCCTGTCCTGT 60.229 52.632 4.18 0.00 0.00 4.00
2833 3703 1.526575 AAAATGCGCCCTGTCCTGTG 61.527 55.000 4.18 0.00 0.00 3.66
2834 3704 3.925630 AATGCGCCCTGTCCTGTGG 62.926 63.158 4.18 0.00 0.00 4.17
2860 3749 3.186283 TGGCCTGTGTAAAATCTAGGGA 58.814 45.455 3.32 0.00 0.00 4.20
2863 3752 4.580580 GGCCTGTGTAAAATCTAGGGAATG 59.419 45.833 0.00 0.00 0.00 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.129634 CACTATACATTATGTTGGGCCACA 58.870 41.667 5.23 8.66 0.00 4.17
1 2 5.008613 CACACTATACATTATGTTGGGCCAC 59.991 44.000 5.23 1.85 0.00 5.01
2 3 5.104318 TCACACTATACATTATGTTGGGCCA 60.104 40.000 0.00 0.00 0.00 5.36
3 4 5.373222 TCACACTATACATTATGTTGGGCC 58.627 41.667 2.23 0.00 0.00 5.80
4 5 7.510549 AATCACACTATACATTATGTTGGGC 57.489 36.000 2.23 0.00 0.00 5.36
54 55 9.201989 GGAAAGAGGGAATTAAATAATTCTGGT 57.798 33.333 19.79 9.16 46.63 4.00
55 56 8.642432 GGGAAAGAGGGAATTAAATAATTCTGG 58.358 37.037 19.79 0.00 46.63 3.86
56 57 8.642432 GGGGAAAGAGGGAATTAAATAATTCTG 58.358 37.037 19.79 0.00 46.63 3.02
57 58 7.789831 GGGGGAAAGAGGGAATTAAATAATTCT 59.210 37.037 19.79 6.61 46.63 2.40
58 59 7.963532 GGGGGAAAGAGGGAATTAAATAATTC 58.036 38.462 14.67 14.67 46.69 2.17
59 60 7.931015 GGGGGAAAGAGGGAATTAAATAATT 57.069 36.000 0.00 0.00 38.51 1.40
88 89 9.862149 CCTACCCCAGTAATTATGAAGTTTAAT 57.138 33.333 0.00 0.00 0.00 1.40
89 90 8.276477 CCCTACCCCAGTAATTATGAAGTTTAA 58.724 37.037 0.00 0.00 0.00 1.52
90 91 7.406739 ACCCTACCCCAGTAATTATGAAGTTTA 59.593 37.037 0.00 0.00 0.00 2.01
91 92 6.218938 ACCCTACCCCAGTAATTATGAAGTTT 59.781 38.462 0.00 0.00 0.00 2.66
92 93 5.734634 ACCCTACCCCAGTAATTATGAAGTT 59.265 40.000 0.00 0.00 0.00 2.66
93 94 5.294473 ACCCTACCCCAGTAATTATGAAGT 58.706 41.667 0.00 0.00 0.00 3.01
94 95 5.906772 ACCCTACCCCAGTAATTATGAAG 57.093 43.478 0.00 0.00 0.00 3.02
95 96 5.732170 TGAACCCTACCCCAGTAATTATGAA 59.268 40.000 0.00 0.00 0.00 2.57
96 97 5.290335 TGAACCCTACCCCAGTAATTATGA 58.710 41.667 0.00 0.00 0.00 2.15
97 98 5.640158 TGAACCCTACCCCAGTAATTATG 57.360 43.478 0.00 0.00 0.00 1.90
98 99 5.674958 ACATGAACCCTACCCCAGTAATTAT 59.325 40.000 0.00 0.00 0.00 1.28
99 100 5.041015 ACATGAACCCTACCCCAGTAATTA 58.959 41.667 0.00 0.00 0.00 1.40
100 101 3.856206 ACATGAACCCTACCCCAGTAATT 59.144 43.478 0.00 0.00 0.00 1.40
101 102 3.470868 ACATGAACCCTACCCCAGTAAT 58.529 45.455 0.00 0.00 0.00 1.89
102 103 2.923908 ACATGAACCCTACCCCAGTAA 58.076 47.619 0.00 0.00 0.00 2.24
103 104 2.653543 ACATGAACCCTACCCCAGTA 57.346 50.000 0.00 0.00 0.00 2.74
104 105 2.653543 TACATGAACCCTACCCCAGT 57.346 50.000 0.00 0.00 0.00 4.00
105 106 3.045634 TGATACATGAACCCTACCCCAG 58.954 50.000 0.00 0.00 0.00 4.45
106 107 3.138123 TGATACATGAACCCTACCCCA 57.862 47.619 0.00 0.00 0.00 4.96
107 108 4.461198 CTTTGATACATGAACCCTACCCC 58.539 47.826 0.00 0.00 0.00 4.95
108 109 3.883489 GCTTTGATACATGAACCCTACCC 59.117 47.826 0.00 0.00 0.00 3.69
109 110 4.523083 TGCTTTGATACATGAACCCTACC 58.477 43.478 0.00 0.00 0.00 3.18
110 111 6.072175 TGTTTGCTTTGATACATGAACCCTAC 60.072 38.462 0.00 0.00 0.00 3.18
111 112 6.007076 TGTTTGCTTTGATACATGAACCCTA 58.993 36.000 0.00 0.00 0.00 3.53
112 113 4.832266 TGTTTGCTTTGATACATGAACCCT 59.168 37.500 0.00 0.00 0.00 4.34
113 114 5.132897 TGTTTGCTTTGATACATGAACCC 57.867 39.130 0.00 0.00 0.00 4.11
114 115 8.931385 ATAATGTTTGCTTTGATACATGAACC 57.069 30.769 0.00 0.00 31.98 3.62
115 116 9.023967 GGATAATGTTTGCTTTGATACATGAAC 57.976 33.333 0.00 0.00 31.98 3.18
116 117 7.914871 CGGATAATGTTTGCTTTGATACATGAA 59.085 33.333 0.00 0.00 31.98 2.57
117 118 7.066887 ACGGATAATGTTTGCTTTGATACATGA 59.933 33.333 0.00 0.00 31.98 3.07
118 119 7.195646 ACGGATAATGTTTGCTTTGATACATG 58.804 34.615 0.00 0.00 31.98 3.21
119 120 7.333528 ACGGATAATGTTTGCTTTGATACAT 57.666 32.000 0.00 0.00 32.89 2.29
120 121 6.751514 ACGGATAATGTTTGCTTTGATACA 57.248 33.333 0.00 0.00 0.00 2.29
121 122 8.556194 TCATACGGATAATGTTTGCTTTGATAC 58.444 33.333 0.00 0.00 0.00 2.24
122 123 8.556194 GTCATACGGATAATGTTTGCTTTGATA 58.444 33.333 0.00 0.00 0.00 2.15
123 124 7.283127 AGTCATACGGATAATGTTTGCTTTGAT 59.717 33.333 0.00 0.00 0.00 2.57
124 125 6.597672 AGTCATACGGATAATGTTTGCTTTGA 59.402 34.615 0.00 0.00 0.00 2.69
125 126 6.688385 CAGTCATACGGATAATGTTTGCTTTG 59.312 38.462 0.00 0.00 0.00 2.77
126 127 6.374333 ACAGTCATACGGATAATGTTTGCTTT 59.626 34.615 0.00 0.00 0.00 3.51
127 128 5.880332 ACAGTCATACGGATAATGTTTGCTT 59.120 36.000 0.00 0.00 0.00 3.91
128 129 5.428253 ACAGTCATACGGATAATGTTTGCT 58.572 37.500 0.00 0.00 0.00 3.91
129 130 5.734855 ACAGTCATACGGATAATGTTTGC 57.265 39.130 0.00 0.00 0.00 3.68
168 169 3.564225 GGGATCAGAACAACACTTTTCGT 59.436 43.478 0.00 0.00 0.00 3.85
169 170 3.363970 CGGGATCAGAACAACACTTTTCG 60.364 47.826 0.00 0.00 0.00 3.46
170 171 3.813166 TCGGGATCAGAACAACACTTTTC 59.187 43.478 0.00 0.00 0.00 2.29
171 172 3.815401 CTCGGGATCAGAACAACACTTTT 59.185 43.478 0.00 0.00 0.00 2.27
172 173 3.403038 CTCGGGATCAGAACAACACTTT 58.597 45.455 0.00 0.00 0.00 2.66
173 174 2.872038 GCTCGGGATCAGAACAACACTT 60.872 50.000 0.00 0.00 0.00 3.16
174 175 1.338200 GCTCGGGATCAGAACAACACT 60.338 52.381 0.00 0.00 0.00 3.55
175 176 1.079503 GCTCGGGATCAGAACAACAC 58.920 55.000 0.00 0.00 0.00 3.32
176 177 0.976641 AGCTCGGGATCAGAACAACA 59.023 50.000 0.00 0.00 0.00 3.33
177 178 1.646189 GAGCTCGGGATCAGAACAAC 58.354 55.000 0.00 0.00 0.00 3.32
178 179 0.173481 CGAGCTCGGGATCAGAACAA 59.827 55.000 28.40 0.00 35.37 2.83
179 180 1.809869 CGAGCTCGGGATCAGAACA 59.190 57.895 28.40 0.00 35.37 3.18
180 181 4.719997 CGAGCTCGGGATCAGAAC 57.280 61.111 28.40 0.00 35.37 3.01
191 192 2.180159 TTTACTGGCCACCCGAGCTC 62.180 60.000 0.00 2.73 0.00 4.09
192 193 1.774894 TTTTACTGGCCACCCGAGCT 61.775 55.000 0.00 0.00 0.00 4.09
193 194 0.679960 ATTTTACTGGCCACCCGAGC 60.680 55.000 0.00 0.00 0.00 5.03
194 195 2.702592 TATTTTACTGGCCACCCGAG 57.297 50.000 0.00 0.00 0.00 4.63
195 196 3.436577 TTTATTTTACTGGCCACCCGA 57.563 42.857 0.00 0.00 0.00 5.14
196 197 4.522722 TTTTTATTTTACTGGCCACCCG 57.477 40.909 0.00 0.00 0.00 5.28
248 249 3.879427 TGCAACCAATCGAAACGTTTAG 58.121 40.909 14.65 14.39 0.00 1.85
253 254 4.707210 AATTTTGCAACCAATCGAAACG 57.293 36.364 0.00 0.00 0.00 3.60
258 259 7.112397 CGATGATAAAATTTTGCAACCAATCG 58.888 34.615 13.76 11.97 0.00 3.34
264 265 5.866633 TCACCCGATGATAAAATTTTGCAAC 59.133 36.000 13.76 9.12 29.99 4.17
276 277 3.645687 TCCATGAATGTCACCCGATGATA 59.354 43.478 0.00 0.00 40.28 2.15
281 282 2.869101 TTTCCATGAATGTCACCCGA 57.131 45.000 0.00 0.00 0.00 5.14
351 352 3.526931 TCGTGGAAAACATGGCAAAAA 57.473 38.095 0.00 0.00 36.71 1.94
356 357 2.487762 TGATCTTCGTGGAAAACATGGC 59.512 45.455 0.00 0.00 36.71 4.40
357 358 4.201950 GGATGATCTTCGTGGAAAACATGG 60.202 45.833 0.00 0.00 36.71 3.66
360 361 4.014569 TGGATGATCTTCGTGGAAAACA 57.985 40.909 2.77 0.00 0.00 2.83
373 383 4.514441 GTGTGATCACTGGAATGGATGATC 59.486 45.833 25.55 6.20 45.07 2.92
392 402 4.325741 TGTTTTGATTGTTTGCGAAGTGTG 59.674 37.500 0.00 0.00 0.00 3.82
394 404 5.640218 ATGTTTTGATTGTTTGCGAAGTG 57.360 34.783 0.00 0.00 0.00 3.16
399 409 8.671536 CATTTACAAATGTTTTGATTGTTTGCG 58.328 29.630 6.96 0.00 40.61 4.85
493 504 2.035193 GCTGTTCTGATCCGAGCTCATA 59.965 50.000 15.40 0.29 0.00 2.15
546 1004 6.430925 TGTCACGTACTACTACCACTGTAAAT 59.569 38.462 0.00 0.00 0.00 1.40
554 1012 4.488126 GTGTTGTCACGTACTACTACCA 57.512 45.455 0.00 0.00 35.21 3.25
644 1493 0.619832 TCAGATCCTGCCTGCCTTCT 60.620 55.000 0.00 0.00 0.00 2.85
807 1661 2.653702 GAGATCTGATCGGCCGGG 59.346 66.667 27.83 13.32 0.00 5.73
933 1791 4.398988 AGCTTGATCTCTGAGTGAGTGTAG 59.601 45.833 4.32 0.00 43.13 2.74
934 1792 4.339748 AGCTTGATCTCTGAGTGAGTGTA 58.660 43.478 4.32 0.00 43.13 2.90
952 1810 2.590007 GATGGCGATGGCGAGCTT 60.590 61.111 0.00 0.00 41.24 3.74
973 1831 1.521681 GCGGCTAGTGGATGTGGAC 60.522 63.158 0.00 0.00 0.00 4.02
974 1832 1.987306 TGCGGCTAGTGGATGTGGA 60.987 57.895 0.00 0.00 0.00 4.02
975 1833 1.815421 GTGCGGCTAGTGGATGTGG 60.815 63.158 0.00 0.00 0.00 4.17
976 1834 2.167219 CGTGCGGCTAGTGGATGTG 61.167 63.158 0.00 0.00 0.00 3.21
977 1835 2.184322 CGTGCGGCTAGTGGATGT 59.816 61.111 0.00 0.00 0.00 3.06
978 1836 3.264897 GCGTGCGGCTAGTGGATG 61.265 66.667 0.00 0.00 39.11 3.51
1029 1890 1.637724 GGAGGAGGAGGACGAGGAGA 61.638 65.000 0.00 0.00 0.00 3.71
1113 1980 3.119096 GAGACGTTGAAGCCGCCC 61.119 66.667 0.00 0.00 0.00 6.13
1114 1981 3.479269 CGAGACGTTGAAGCCGCC 61.479 66.667 0.00 0.00 0.00 6.13
1115 1982 3.479269 CCGAGACGTTGAAGCCGC 61.479 66.667 0.00 0.00 0.00 6.53
1387 2254 4.796231 GAGCGTGGTGGCGACGAT 62.796 66.667 0.00 0.91 37.77 3.73
1894 2762 4.877323 AAATTTATCGAGGCTTTCCGAC 57.123 40.909 0.00 0.00 37.64 4.79
1898 2766 6.196079 AGACCAAAATTTATCGAGGCTTTC 57.804 37.500 0.00 0.00 0.00 2.62
2070 2940 6.538742 CGAGCCATTTTGAAGTCTAATAAGGA 59.461 38.462 0.00 0.00 0.00 3.36
2078 2948 5.705441 TGTAAATCGAGCCATTTTGAAGTCT 59.295 36.000 0.00 0.00 0.00 3.24
2079 2949 5.938322 TGTAAATCGAGCCATTTTGAAGTC 58.062 37.500 0.00 0.00 0.00 3.01
2094 2964 5.250235 TGAGAACTAGAGGCTGTAAATCG 57.750 43.478 0.00 0.00 0.00 3.34
2125 2995 2.171003 GAAAACTGGAGGGGGACATTG 58.829 52.381 0.00 0.00 0.00 2.82
2133 3003 0.535102 ACAGCGTGAAAACTGGAGGG 60.535 55.000 0.00 0.00 38.25 4.30
2160 3030 1.439679 GTTTGACACGAGATGGGGTC 58.560 55.000 0.00 0.00 0.00 4.46
2163 3033 0.036164 TGGGTTTGACACGAGATGGG 59.964 55.000 0.00 0.00 0.00 4.00
2172 3042 5.654650 AGTGTTACTTTGATTGGGTTTGACA 59.345 36.000 0.00 0.00 0.00 3.58
2255 3125 1.908619 GGTGCCAATCCCTTTTCCAAT 59.091 47.619 0.00 0.00 0.00 3.16
2279 3149 2.752903 CCTAGCTTGTAATTTTGCCGGT 59.247 45.455 1.90 0.00 0.00 5.28
2309 3179 3.955471 TCCTAGGAAAGGCAACAAGATG 58.045 45.455 9.71 0.00 46.10 2.90
2336 3206 4.176271 GGATTGCTAGTGTCAATTTTGGC 58.824 43.478 0.00 0.00 34.59 4.52
2337 3207 5.389859 TGGATTGCTAGTGTCAATTTTGG 57.610 39.130 0.00 0.00 34.59 3.28
2358 3228 5.385509 AAGTCCAAACCGAACCATATTTG 57.614 39.130 0.00 0.00 32.89 2.32
2359 3229 6.005198 TGTAAGTCCAAACCGAACCATATTT 58.995 36.000 0.00 0.00 0.00 1.40
2360 3230 5.562635 TGTAAGTCCAAACCGAACCATATT 58.437 37.500 0.00 0.00 0.00 1.28
2361 3231 5.168647 TGTAAGTCCAAACCGAACCATAT 57.831 39.130 0.00 0.00 0.00 1.78
2364 3234 3.278668 TTGTAAGTCCAAACCGAACCA 57.721 42.857 0.00 0.00 0.00 3.67
2365 3235 4.635833 TTTTGTAAGTCCAAACCGAACC 57.364 40.909 0.00 0.00 34.23 3.62
2366 3236 5.217393 GGATTTTGTAAGTCCAAACCGAAC 58.783 41.667 0.00 0.00 34.23 3.95
2367 3237 4.023878 CGGATTTTGTAAGTCCAAACCGAA 60.024 41.667 8.97 0.00 42.20 4.30
2368 3238 3.499157 CGGATTTTGTAAGTCCAAACCGA 59.501 43.478 8.97 0.00 42.20 4.69
2369 3239 3.817238 CGGATTTTGTAAGTCCAAACCG 58.183 45.455 0.00 0.00 37.51 4.44
2370 3240 3.004944 TGCGGATTTTGTAAGTCCAAACC 59.995 43.478 0.00 0.00 34.23 3.27
2371 3241 4.231718 TGCGGATTTTGTAAGTCCAAAC 57.768 40.909 0.00 0.00 34.23 2.93
2372 3242 4.794655 GCTTGCGGATTTTGTAAGTCCAAA 60.795 41.667 0.00 0.00 32.46 3.28
2373 3243 3.305064 GCTTGCGGATTTTGTAAGTCCAA 60.305 43.478 0.00 0.00 32.46 3.53
2375 3245 2.415491 GGCTTGCGGATTTTGTAAGTCC 60.415 50.000 0.00 0.00 32.46 3.85
2376 3246 2.227865 TGGCTTGCGGATTTTGTAAGTC 59.772 45.455 0.00 0.00 34.74 3.01
2378 3248 3.244976 CTTGGCTTGCGGATTTTGTAAG 58.755 45.455 0.00 0.00 32.94 2.34
2381 3251 1.039856 ACTTGGCTTGCGGATTTTGT 58.960 45.000 0.00 0.00 0.00 2.83
2382 3252 2.061028 GAACTTGGCTTGCGGATTTTG 58.939 47.619 0.00 0.00 0.00 2.44
2383 3253 1.335872 CGAACTTGGCTTGCGGATTTT 60.336 47.619 0.00 0.00 0.00 1.82
2385 3255 0.889186 ACGAACTTGGCTTGCGGATT 60.889 50.000 0.00 0.00 0.00 3.01
2387 3257 2.110213 ACGAACTTGGCTTGCGGA 59.890 55.556 0.00 0.00 0.00 5.54
2389 3259 0.584396 TAACACGAACTTGGCTTGCG 59.416 50.000 0.00 0.00 0.00 4.85
2390 3260 1.602377 ACTAACACGAACTTGGCTTGC 59.398 47.619 0.00 0.00 0.00 4.01
2392 3262 2.870411 GTGACTAACACGAACTTGGCTT 59.130 45.455 0.00 0.00 39.78 4.35
2393 3263 2.480845 GTGACTAACACGAACTTGGCT 58.519 47.619 0.00 0.00 39.78 4.75
2394 3264 2.943843 GTGACTAACACGAACTTGGC 57.056 50.000 0.00 0.00 39.78 4.52
2404 3274 6.449635 AGTTGAAAAATGCAGTGACTAACA 57.550 33.333 0.00 0.00 0.00 2.41
2406 3276 7.094508 TCAAGTTGAAAAATGCAGTGACTAA 57.905 32.000 2.20 0.00 0.00 2.24
2407 3277 6.691754 TCAAGTTGAAAAATGCAGTGACTA 57.308 33.333 2.20 0.00 0.00 2.59
2408 3278 5.581126 TCAAGTTGAAAAATGCAGTGACT 57.419 34.783 2.20 0.00 0.00 3.41
2409 3279 6.833342 AATCAAGTTGAAAAATGCAGTGAC 57.167 33.333 10.14 0.00 0.00 3.67
2410 3280 7.437862 GGTAAATCAAGTTGAAAAATGCAGTGA 59.562 33.333 10.14 0.00 0.00 3.41
2413 3283 6.640499 TCGGTAAATCAAGTTGAAAAATGCAG 59.360 34.615 10.14 1.85 0.00 4.41
2414 3284 6.507900 TCGGTAAATCAAGTTGAAAAATGCA 58.492 32.000 10.14 0.00 0.00 3.96
2415 3285 7.169140 ACTTCGGTAAATCAAGTTGAAAAATGC 59.831 33.333 10.14 0.49 0.00 3.56
2416 3286 8.479280 CACTTCGGTAAATCAAGTTGAAAAATG 58.521 33.333 10.14 0.00 0.00 2.32
2417 3287 8.194769 ACACTTCGGTAAATCAAGTTGAAAAAT 58.805 29.630 10.14 0.00 0.00 1.82
2418 3288 7.540299 ACACTTCGGTAAATCAAGTTGAAAAA 58.460 30.769 10.14 0.00 0.00 1.94
2422 3292 5.818336 TCAACACTTCGGTAAATCAAGTTGA 59.182 36.000 8.27 8.27 40.06 3.18
2423 3293 6.055231 TCAACACTTCGGTAAATCAAGTTG 57.945 37.500 0.00 0.00 36.19 3.16
2424 3294 6.317893 ACTTCAACACTTCGGTAAATCAAGTT 59.682 34.615 0.00 0.00 0.00 2.66
2425 3295 5.820947 ACTTCAACACTTCGGTAAATCAAGT 59.179 36.000 0.00 0.00 0.00 3.16
2426 3296 6.300354 ACTTCAACACTTCGGTAAATCAAG 57.700 37.500 0.00 0.00 0.00 3.02
2430 3300 4.553938 CGCAACTTCAACACTTCGGTAAAT 60.554 41.667 0.00 0.00 0.00 1.40
2431 3301 3.242478 CGCAACTTCAACACTTCGGTAAA 60.242 43.478 0.00 0.00 0.00 2.01
2432 3302 2.285756 CGCAACTTCAACACTTCGGTAA 59.714 45.455 0.00 0.00 0.00 2.85
2433 3303 1.862201 CGCAACTTCAACACTTCGGTA 59.138 47.619 0.00 0.00 0.00 4.02
2434 3304 0.655733 CGCAACTTCAACACTTCGGT 59.344 50.000 0.00 0.00 0.00 4.69
2435 3305 0.655733 ACGCAACTTCAACACTTCGG 59.344 50.000 0.00 0.00 0.00 4.30
2437 3307 3.675467 AGAACGCAACTTCAACACTTC 57.325 42.857 0.00 0.00 0.00 3.01
2438 3308 4.412207 GAAAGAACGCAACTTCAACACTT 58.588 39.130 0.00 0.00 0.00 3.16
2439 3309 3.181500 GGAAAGAACGCAACTTCAACACT 60.181 43.478 0.00 0.00 0.00 3.55
2441 3311 3.013921 AGGAAAGAACGCAACTTCAACA 58.986 40.909 0.00 0.00 0.00 3.33
2442 3312 3.064820 TCAGGAAAGAACGCAACTTCAAC 59.935 43.478 0.00 0.00 0.00 3.18
2443 3313 3.275143 TCAGGAAAGAACGCAACTTCAA 58.725 40.909 0.00 0.00 0.00 2.69
2445 3315 3.498397 TCATCAGGAAAGAACGCAACTTC 59.502 43.478 0.00 0.00 0.00 3.01
2447 3317 3.126001 TCATCAGGAAAGAACGCAACT 57.874 42.857 0.00 0.00 0.00 3.16
2460 3330 1.304282 CACCCACCCCTTCATCAGG 59.696 63.158 0.00 0.00 43.49 3.86
2461 3331 0.322816 CACACCCACCCCTTCATCAG 60.323 60.000 0.00 0.00 0.00 2.90
2463 3333 0.322546 GTCACACCCACCCCTTCATC 60.323 60.000 0.00 0.00 0.00 2.92
2464 3334 0.772124 AGTCACACCCACCCCTTCAT 60.772 55.000 0.00 0.00 0.00 2.57
2465 3335 1.385347 AGTCACACCCACCCCTTCA 60.385 57.895 0.00 0.00 0.00 3.02
2466 3336 1.073199 CAGTCACACCCACCCCTTC 59.927 63.158 0.00 0.00 0.00 3.46
2468 3338 3.570212 GCAGTCACACCCACCCCT 61.570 66.667 0.00 0.00 0.00 4.79
2469 3339 3.570212 AGCAGTCACACCCACCCC 61.570 66.667 0.00 0.00 0.00 4.95
2470 3340 2.281761 CAGCAGTCACACCCACCC 60.282 66.667 0.00 0.00 0.00 4.61
2472 3342 2.111878 AGCAGCAGTCACACCCAC 59.888 61.111 0.00 0.00 0.00 4.61
2473 3343 1.406860 TACAGCAGCAGTCACACCCA 61.407 55.000 0.00 0.00 0.00 4.51
2474 3344 0.250295 TTACAGCAGCAGTCACACCC 60.250 55.000 0.00 0.00 0.00 4.61
2475 3345 1.813513 ATTACAGCAGCAGTCACACC 58.186 50.000 0.00 0.00 0.00 4.16
2476 3346 4.245660 TCTTATTACAGCAGCAGTCACAC 58.754 43.478 0.00 0.00 0.00 3.82
2477 3347 4.220602 TCTCTTATTACAGCAGCAGTCACA 59.779 41.667 0.00 0.00 0.00 3.58
2478 3348 4.748892 TCTCTTATTACAGCAGCAGTCAC 58.251 43.478 0.00 0.00 0.00 3.67
2479 3349 5.127682 TCATCTCTTATTACAGCAGCAGTCA 59.872 40.000 0.00 0.00 0.00 3.41
2480 3350 5.461737 GTCATCTCTTATTACAGCAGCAGTC 59.538 44.000 0.00 0.00 0.00 3.51
2481 3351 5.105187 TGTCATCTCTTATTACAGCAGCAGT 60.105 40.000 0.00 0.00 0.00 4.40
2482 3352 5.354767 TGTCATCTCTTATTACAGCAGCAG 58.645 41.667 0.00 0.00 0.00 4.24
2483 3353 5.343307 TGTCATCTCTTATTACAGCAGCA 57.657 39.130 0.00 0.00 0.00 4.41
2484 3354 4.749099 CCTGTCATCTCTTATTACAGCAGC 59.251 45.833 0.00 0.00 36.96 5.25
2485 3355 5.295950 CCCTGTCATCTCTTATTACAGCAG 58.704 45.833 0.00 0.00 36.96 4.24
2486 3356 4.101585 CCCCTGTCATCTCTTATTACAGCA 59.898 45.833 0.00 0.00 36.96 4.41
2487 3357 4.101741 ACCCCTGTCATCTCTTATTACAGC 59.898 45.833 0.00 0.00 36.96 4.40
2488 3358 5.878406 ACCCCTGTCATCTCTTATTACAG 57.122 43.478 0.00 0.00 37.81 2.74
2490 3360 7.362802 ACTTACCCCTGTCATCTCTTATTAC 57.637 40.000 0.00 0.00 0.00 1.89
2491 3361 7.989947 AACTTACCCCTGTCATCTCTTATTA 57.010 36.000 0.00 0.00 0.00 0.98
2494 3364 6.697641 AAAACTTACCCCTGTCATCTCTTA 57.302 37.500 0.00 0.00 0.00 2.10
2495 3365 5.584551 AAAACTTACCCCTGTCATCTCTT 57.415 39.130 0.00 0.00 0.00 2.85
2497 3367 5.297029 GCATAAAACTTACCCCTGTCATCTC 59.703 44.000 0.00 0.00 0.00 2.75
2498 3368 5.193679 GCATAAAACTTACCCCTGTCATCT 58.806 41.667 0.00 0.00 0.00 2.90
2499 3369 4.947388 TGCATAAAACTTACCCCTGTCATC 59.053 41.667 0.00 0.00 0.00 2.92
2501 3371 4.331968 CTGCATAAAACTTACCCCTGTCA 58.668 43.478 0.00 0.00 0.00 3.58
2502 3372 3.128764 GCTGCATAAAACTTACCCCTGTC 59.871 47.826 0.00 0.00 0.00 3.51
2504 3374 3.129287 CAGCTGCATAAAACTTACCCCTG 59.871 47.826 0.00 0.00 0.00 4.45
2505 3375 3.010138 TCAGCTGCATAAAACTTACCCCT 59.990 43.478 9.47 0.00 0.00 4.79
2506 3376 3.128764 GTCAGCTGCATAAAACTTACCCC 59.871 47.826 9.47 0.00 0.00 4.95
2507 3377 3.181510 CGTCAGCTGCATAAAACTTACCC 60.182 47.826 9.47 0.00 0.00 3.69
2508 3378 3.435671 ACGTCAGCTGCATAAAACTTACC 59.564 43.478 9.47 0.00 0.00 2.85
2509 3379 4.151689 TCACGTCAGCTGCATAAAACTTAC 59.848 41.667 9.47 0.00 0.00 2.34
2510 3380 4.311606 TCACGTCAGCTGCATAAAACTTA 58.688 39.130 9.47 0.00 0.00 2.24
2511 3381 3.138304 TCACGTCAGCTGCATAAAACTT 58.862 40.909 9.47 0.00 0.00 2.66
2512 3382 2.766313 TCACGTCAGCTGCATAAAACT 58.234 42.857 9.47 0.00 0.00 2.66
2513 3383 3.125146 TGATCACGTCAGCTGCATAAAAC 59.875 43.478 9.47 0.00 31.80 2.43
2515 3385 2.672874 GTGATCACGTCAGCTGCATAAA 59.327 45.455 10.69 0.00 37.56 1.40
2516 3386 2.094026 AGTGATCACGTCAGCTGCATAA 60.094 45.455 19.85 0.00 37.56 1.90
2518 3388 0.248565 AGTGATCACGTCAGCTGCAT 59.751 50.000 19.85 0.00 37.56 3.96
2519 3389 0.887933 TAGTGATCACGTCAGCTGCA 59.112 50.000 19.85 0.00 37.56 4.41
2520 3390 1.272781 GTAGTGATCACGTCAGCTGC 58.727 55.000 19.85 3.23 37.56 5.25
2521 3391 2.162408 TCTGTAGTGATCACGTCAGCTG 59.838 50.000 30.32 7.63 37.56 4.24
2522 3392 2.437413 TCTGTAGTGATCACGTCAGCT 58.563 47.619 30.32 15.08 37.56 4.24
2523 3393 2.921634 TCTGTAGTGATCACGTCAGC 57.078 50.000 30.32 18.15 37.56 4.26
2526 3396 2.159558 TCGCTTCTGTAGTGATCACGTC 60.160 50.000 19.85 16.29 38.45 4.34
2528 3398 2.544480 TCGCTTCTGTAGTGATCACG 57.456 50.000 19.85 6.18 38.45 4.35
2533 3403 0.175760 GGCCATCGCTTCTGTAGTGA 59.824 55.000 0.00 0.00 46.77 3.41
2535 3405 0.833287 ATGGCCATCGCTTCTGTAGT 59.167 50.000 14.09 0.00 34.44 2.73
2536 3406 1.202568 TCATGGCCATCGCTTCTGTAG 60.203 52.381 17.61 0.00 34.44 2.74
2537 3407 0.829990 TCATGGCCATCGCTTCTGTA 59.170 50.000 17.61 0.00 34.44 2.74
2538 3408 0.463295 CTCATGGCCATCGCTTCTGT 60.463 55.000 17.61 0.00 34.44 3.41
2539 3409 0.179065 TCTCATGGCCATCGCTTCTG 60.179 55.000 17.61 4.26 34.44 3.02
2540 3410 0.106335 CTCTCATGGCCATCGCTTCT 59.894 55.000 17.61 0.00 34.44 2.85
2543 3413 0.035036 CATCTCTCATGGCCATCGCT 59.965 55.000 17.61 0.00 34.44 4.93
2544 3414 0.954449 CCATCTCTCATGGCCATCGC 60.954 60.000 17.61 0.00 31.75 4.58
2545 3415 0.683412 TCCATCTCTCATGGCCATCG 59.317 55.000 17.61 11.99 39.01 3.84
2546 3416 1.698532 AGTCCATCTCTCATGGCCATC 59.301 52.381 17.61 0.00 39.01 3.51
2547 3417 1.817087 AGTCCATCTCTCATGGCCAT 58.183 50.000 14.09 14.09 39.01 4.40
2548 3418 1.211212 CAAGTCCATCTCTCATGGCCA 59.789 52.381 8.56 8.56 39.01 5.36
2549 3419 1.964552 CAAGTCCATCTCTCATGGCC 58.035 55.000 0.00 0.00 39.01 5.36
2550 3420 1.307097 GCAAGTCCATCTCTCATGGC 58.693 55.000 0.00 0.00 39.01 4.40
2551 3421 1.476471 GGGCAAGTCCATCTCTCATGG 60.476 57.143 0.00 0.00 40.48 3.66
2552 3422 1.489649 AGGGCAAGTCCATCTCTCATG 59.510 52.381 0.00 0.00 36.21 3.07
2555 3425 2.016096 GCAAGGGCAAGTCCATCTCTC 61.016 57.143 0.00 0.00 40.72 3.20
2556 3426 0.034670 GCAAGGGCAAGTCCATCTCT 60.035 55.000 0.00 0.00 40.72 3.10
2557 3427 0.034670 AGCAAGGGCAAGTCCATCTC 60.035 55.000 0.00 0.00 44.61 2.75
2559 3429 1.745653 GTTAGCAAGGGCAAGTCCATC 59.254 52.381 0.00 0.00 44.61 3.51
2561 3431 0.771127 AGTTAGCAAGGGCAAGTCCA 59.229 50.000 0.00 0.00 44.61 4.02
2562 3432 1.003696 AGAGTTAGCAAGGGCAAGTCC 59.996 52.381 0.00 0.00 44.61 3.85
2565 3435 2.746362 CAAGAGAGTTAGCAAGGGCAAG 59.254 50.000 0.00 0.00 44.61 4.01
2568 3438 1.680249 CCCAAGAGAGTTAGCAAGGGC 60.680 57.143 0.00 0.00 41.61 5.19
2569 3439 1.630878 ACCCAAGAGAGTTAGCAAGGG 59.369 52.381 0.00 0.00 40.88 3.95
2570 3440 3.425162 AACCCAAGAGAGTTAGCAAGG 57.575 47.619 0.00 0.00 0.00 3.61
2571 3441 7.308435 CAATTAAACCCAAGAGAGTTAGCAAG 58.692 38.462 0.00 0.00 0.00 4.01
2572 3442 6.208599 CCAATTAAACCCAAGAGAGTTAGCAA 59.791 38.462 0.00 0.00 0.00 3.91
2573 3443 5.710099 CCAATTAAACCCAAGAGAGTTAGCA 59.290 40.000 0.00 0.00 0.00 3.49
2574 3444 5.393135 GCCAATTAAACCCAAGAGAGTTAGC 60.393 44.000 0.00 0.00 0.00 3.09
2577 3447 4.740902 AGCCAATTAAACCCAAGAGAGTT 58.259 39.130 0.00 0.00 0.00 3.01
2578 3448 4.336280 GAGCCAATTAAACCCAAGAGAGT 58.664 43.478 0.00 0.00 0.00 3.24
2579 3449 3.375299 CGAGCCAATTAAACCCAAGAGAG 59.625 47.826 0.00 0.00 0.00 3.20
2580 3450 3.008594 TCGAGCCAATTAAACCCAAGAGA 59.991 43.478 0.00 0.00 0.00 3.10
2581 3451 3.343617 TCGAGCCAATTAAACCCAAGAG 58.656 45.455 0.00 0.00 0.00 2.85
2582 3452 3.343617 CTCGAGCCAATTAAACCCAAGA 58.656 45.455 0.00 0.00 0.00 3.02
2583 3453 2.423538 CCTCGAGCCAATTAAACCCAAG 59.576 50.000 6.99 0.00 0.00 3.61
2584 3454 2.442413 CCTCGAGCCAATTAAACCCAA 58.558 47.619 6.99 0.00 0.00 4.12
2586 3456 0.738975 GCCTCGAGCCAATTAAACCC 59.261 55.000 6.99 0.00 34.35 4.11
2587 3457 0.377203 CGCCTCGAGCCAATTAAACC 59.623 55.000 6.99 0.00 38.78 3.27
2588 3458 1.084289 ACGCCTCGAGCCAATTAAAC 58.916 50.000 6.99 0.00 38.78 2.01
2589 3459 2.093869 ACTACGCCTCGAGCCAATTAAA 60.094 45.455 6.99 0.00 38.78 1.52
2591 3461 1.066605 GACTACGCCTCGAGCCAATTA 59.933 52.381 6.99 0.00 38.78 1.40
2593 3463 1.437986 GACTACGCCTCGAGCCAAT 59.562 57.895 6.99 0.00 38.78 3.16
2594 3464 2.882876 GACTACGCCTCGAGCCAA 59.117 61.111 6.99 0.00 38.78 4.52
2595 3465 3.506096 CGACTACGCCTCGAGCCA 61.506 66.667 6.99 0.00 38.78 4.75
2596 3466 4.253257 CCGACTACGCCTCGAGCC 62.253 72.222 6.99 0.00 38.78 4.70
2597 3467 2.061182 AATCCGACTACGCCTCGAGC 62.061 60.000 6.99 1.53 38.29 5.03
2598 3468 0.041135 GAATCCGACTACGCCTCGAG 60.041 60.000 5.13 5.13 38.29 4.04
2599 3469 1.442526 GGAATCCGACTACGCCTCGA 61.443 60.000 0.00 0.00 38.29 4.04
2600 3470 1.008767 GGAATCCGACTACGCCTCG 60.009 63.158 0.00 0.00 38.29 4.63
2601 3471 0.745468 AAGGAATCCGACTACGCCTC 59.255 55.000 0.00 0.00 38.29 4.70
2602 3472 1.680207 GTAAGGAATCCGACTACGCCT 59.320 52.381 0.00 0.00 38.29 5.52
2603 3473 1.269465 GGTAAGGAATCCGACTACGCC 60.269 57.143 7.20 0.00 38.29 5.68
2604 3474 1.406539 TGGTAAGGAATCCGACTACGC 59.593 52.381 7.20 1.25 38.29 4.42
2605 3475 3.305199 GGATGGTAAGGAATCCGACTACG 60.305 52.174 7.20 0.00 33.42 3.51
2608 3478 2.759355 TGGATGGTAAGGAATCCGACT 58.241 47.619 7.20 0.00 44.59 4.18
2609 3479 3.771577 ATGGATGGTAAGGAATCCGAC 57.228 47.619 0.00 0.00 44.59 4.79
2610 3480 6.448369 AATTATGGATGGTAAGGAATCCGA 57.552 37.500 0.00 0.00 44.59 4.55
2611 3481 7.014230 ACAAAATTATGGATGGTAAGGAATCCG 59.986 37.037 0.00 0.00 44.59 4.18
2612 3482 8.143835 CACAAAATTATGGATGGTAAGGAATCC 58.856 37.037 0.00 0.00 42.40 3.01
2613 3483 7.653311 GCACAAAATTATGGATGGTAAGGAATC 59.347 37.037 0.00 0.00 0.00 2.52
2616 3486 5.954752 TGCACAAAATTATGGATGGTAAGGA 59.045 36.000 0.00 0.00 0.00 3.36
2617 3487 6.042143 GTGCACAAAATTATGGATGGTAAGG 58.958 40.000 13.17 0.00 0.00 2.69
2618 3488 6.753279 CAGTGCACAAAATTATGGATGGTAAG 59.247 38.462 21.04 0.00 0.00 2.34
2619 3489 6.350864 CCAGTGCACAAAATTATGGATGGTAA 60.351 38.462 21.04 0.00 0.00 2.85
2620 3490 5.126869 CCAGTGCACAAAATTATGGATGGTA 59.873 40.000 21.04 0.00 0.00 3.25
2621 3491 4.081531 CCAGTGCACAAAATTATGGATGGT 60.082 41.667 21.04 0.00 0.00 3.55
2622 3492 4.435425 CCAGTGCACAAAATTATGGATGG 58.565 43.478 21.04 9.26 0.00 3.51
2623 3493 4.435425 CCCAGTGCACAAAATTATGGATG 58.565 43.478 21.04 3.40 0.00 3.51
2625 3495 2.233431 GCCCAGTGCACAAAATTATGGA 59.767 45.455 21.04 0.00 40.77 3.41
2626 3496 2.620242 GCCCAGTGCACAAAATTATGG 58.380 47.619 21.04 15.37 40.77 2.74
2638 3508 1.099879 CCATCTAGCTTGCCCAGTGC 61.100 60.000 0.00 0.00 41.77 4.40
2639 3509 0.254178 ACCATCTAGCTTGCCCAGTG 59.746 55.000 0.00 0.00 0.00 3.66
2641 3511 0.465097 CCACCATCTAGCTTGCCCAG 60.465 60.000 0.00 0.00 0.00 4.45
2642 3512 1.609239 CCACCATCTAGCTTGCCCA 59.391 57.895 0.00 0.00 0.00 5.36
2643 3513 1.152881 CCCACCATCTAGCTTGCCC 60.153 63.158 0.00 0.00 0.00 5.36
2644 3514 0.475906 ATCCCACCATCTAGCTTGCC 59.524 55.000 0.00 0.00 0.00 4.52
2645 3515 1.602311 CATCCCACCATCTAGCTTGC 58.398 55.000 0.00 0.00 0.00 4.01
2646 3516 1.602311 GCATCCCACCATCTAGCTTG 58.398 55.000 0.00 0.00 0.00 4.01
2647 3517 0.107456 CGCATCCCACCATCTAGCTT 59.893 55.000 0.00 0.00 0.00 3.74
2650 3520 1.338107 TACCGCATCCCACCATCTAG 58.662 55.000 0.00 0.00 0.00 2.43
2651 3521 1.414919 GTTACCGCATCCCACCATCTA 59.585 52.381 0.00 0.00 0.00 1.98
2653 3523 0.107410 TGTTACCGCATCCCACCATC 60.107 55.000 0.00 0.00 0.00 3.51
2654 3524 0.329931 TTGTTACCGCATCCCACCAT 59.670 50.000 0.00 0.00 0.00 3.55
2655 3525 0.606944 GTTGTTACCGCATCCCACCA 60.607 55.000 0.00 0.00 0.00 4.17
2656 3526 0.606944 TGTTGTTACCGCATCCCACC 60.607 55.000 0.00 0.00 0.00 4.61
2657 3527 1.240256 TTGTTGTTACCGCATCCCAC 58.760 50.000 0.00 0.00 0.00 4.61
2658 3528 2.208132 ATTGTTGTTACCGCATCCCA 57.792 45.000 0.00 0.00 0.00 4.37
2659 3529 3.586100 AAATTGTTGTTACCGCATCCC 57.414 42.857 0.00 0.00 0.00 3.85
2661 3531 4.210120 TGCAAAAATTGTTGTTACCGCATC 59.790 37.500 10.07 0.00 0.00 3.91
2662 3532 4.122776 TGCAAAAATTGTTGTTACCGCAT 58.877 34.783 10.07 0.00 0.00 4.73
2664 3534 3.799420 TCTGCAAAAATTGTTGTTACCGC 59.201 39.130 10.07 0.00 0.00 5.68
2666 3536 7.125113 CACATTCTGCAAAAATTGTTGTTACC 58.875 34.615 10.07 0.00 0.00 2.85
2667 3537 7.635587 CACACATTCTGCAAAAATTGTTGTTAC 59.364 33.333 10.07 0.00 0.00 2.50
2668 3538 7.201591 CCACACATTCTGCAAAAATTGTTGTTA 60.202 33.333 10.07 0.00 0.00 2.41
2669 3539 6.403418 CCACACATTCTGCAAAAATTGTTGTT 60.403 34.615 10.07 0.00 0.00 2.83
2671 3541 5.503498 CCACACATTCTGCAAAAATTGTTG 58.497 37.500 3.80 3.80 0.00 3.33
2672 3542 4.575645 CCCACACATTCTGCAAAAATTGTT 59.424 37.500 0.00 0.00 0.00 2.83
2673 3543 4.128643 CCCACACATTCTGCAAAAATTGT 58.871 39.130 0.00 0.00 0.00 2.71
2675 3545 3.140623 GCCCACACATTCTGCAAAAATT 58.859 40.909 0.00 0.00 0.00 1.82
2676 3546 2.369532 AGCCCACACATTCTGCAAAAAT 59.630 40.909 0.00 0.00 0.00 1.82
2677 3547 1.761784 AGCCCACACATTCTGCAAAAA 59.238 42.857 0.00 0.00 0.00 1.94
2678 3548 1.412079 AGCCCACACATTCTGCAAAA 58.588 45.000 0.00 0.00 0.00 2.44
2679 3549 1.412079 AAGCCCACACATTCTGCAAA 58.588 45.000 0.00 0.00 0.00 3.68
2680 3550 2.161855 CTAAGCCCACACATTCTGCAA 58.838 47.619 0.00 0.00 0.00 4.08
2681 3551 1.614051 CCTAAGCCCACACATTCTGCA 60.614 52.381 0.00 0.00 0.00 4.41
2682 3552 1.098050 CCTAAGCCCACACATTCTGC 58.902 55.000 0.00 0.00 0.00 4.26
2684 3554 3.182152 AGTACCTAAGCCCACACATTCT 58.818 45.455 0.00 0.00 0.00 2.40
2686 3556 4.079253 CAAAGTACCTAAGCCCACACATT 58.921 43.478 0.00 0.00 0.00 2.71
2687 3557 3.329520 TCAAAGTACCTAAGCCCACACAT 59.670 43.478 0.00 0.00 0.00 3.21
2688 3558 2.706723 TCAAAGTACCTAAGCCCACACA 59.293 45.455 0.00 0.00 0.00 3.72
2689 3559 3.412237 TCAAAGTACCTAAGCCCACAC 57.588 47.619 0.00 0.00 0.00 3.82
2692 3562 3.589735 TCCAATCAAAGTACCTAAGCCCA 59.410 43.478 0.00 0.00 0.00 5.36
2693 3563 4.230745 TCCAATCAAAGTACCTAAGCCC 57.769 45.455 0.00 0.00 0.00 5.19
2694 3564 5.450550 GCATTCCAATCAAAGTACCTAAGCC 60.451 44.000 0.00 0.00 0.00 4.35
2696 3566 5.652014 TGGCATTCCAATCAAAGTACCTAAG 59.348 40.000 0.00 0.00 39.99 2.18
2697 3567 5.575157 TGGCATTCCAATCAAAGTACCTAA 58.425 37.500 0.00 0.00 39.99 2.69
2698 3568 5.186256 TGGCATTCCAATCAAAGTACCTA 57.814 39.130 0.00 0.00 39.99 3.08
2699 3569 4.046286 TGGCATTCCAATCAAAGTACCT 57.954 40.909 0.00 0.00 39.99 3.08
2715 3585 5.334260 CGAAAACAATGCTTGAAAATGGCAT 60.334 36.000 0.00 0.00 46.79 4.40
2717 3587 4.024977 ACGAAAACAATGCTTGAAAATGGC 60.025 37.500 0.00 0.00 0.00 4.40
2719 3589 6.936374 AGAACGAAAACAATGCTTGAAAATG 58.064 32.000 0.00 0.00 0.00 2.32
2720 3590 7.064490 ACAAGAACGAAAACAATGCTTGAAAAT 59.936 29.630 0.00 0.00 36.18 1.82
2721 3591 6.367422 ACAAGAACGAAAACAATGCTTGAAAA 59.633 30.769 0.00 0.00 36.18 2.29
2722 3592 5.866633 ACAAGAACGAAAACAATGCTTGAAA 59.133 32.000 0.00 0.00 36.18 2.69
2723 3593 5.406649 ACAAGAACGAAAACAATGCTTGAA 58.593 33.333 0.00 0.00 36.18 2.69
2724 3594 4.992688 ACAAGAACGAAAACAATGCTTGA 58.007 34.783 0.00 0.00 36.18 3.02
2725 3595 6.804534 TTACAAGAACGAAAACAATGCTTG 57.195 33.333 0.00 0.00 37.75 4.01
2727 3597 5.920273 CCATTACAAGAACGAAAACAATGCT 59.080 36.000 0.00 0.00 0.00 3.79
2728 3598 5.689961 ACCATTACAAGAACGAAAACAATGC 59.310 36.000 0.00 0.00 0.00 3.56
2731 3601 6.438259 TGACCATTACAAGAACGAAAACAA 57.562 33.333 0.00 0.00 0.00 2.83
2732 3602 6.038825 ACATGACCATTACAAGAACGAAAACA 59.961 34.615 0.00 0.00 0.00 2.83
2734 3604 6.434596 CACATGACCATTACAAGAACGAAAA 58.565 36.000 0.00 0.00 0.00 2.29
2735 3605 5.561919 GCACATGACCATTACAAGAACGAAA 60.562 40.000 0.00 0.00 0.00 3.46
2736 3606 4.083537 GCACATGACCATTACAAGAACGAA 60.084 41.667 0.00 0.00 0.00 3.85
2737 3607 3.435327 GCACATGACCATTACAAGAACGA 59.565 43.478 0.00 0.00 0.00 3.85
2738 3608 3.436704 AGCACATGACCATTACAAGAACG 59.563 43.478 0.00 0.00 0.00 3.95
2739 3609 5.447818 GCTAGCACATGACCATTACAAGAAC 60.448 44.000 10.63 0.00 0.00 3.01
2740 3610 4.635765 GCTAGCACATGACCATTACAAGAA 59.364 41.667 10.63 0.00 0.00 2.52
2741 3611 4.191544 GCTAGCACATGACCATTACAAGA 58.808 43.478 10.63 0.00 0.00 3.02
2742 3612 3.940852 TGCTAGCACATGACCATTACAAG 59.059 43.478 14.93 0.00 0.00 3.16
2743 3613 3.949132 TGCTAGCACATGACCATTACAA 58.051 40.909 14.93 0.00 0.00 2.41
2744 3614 3.625649 TGCTAGCACATGACCATTACA 57.374 42.857 14.93 0.00 0.00 2.41
2746 3616 6.152492 TGAAAATTGCTAGCACATGACCATTA 59.848 34.615 19.17 0.00 0.00 1.90
2749 3619 3.825585 TGAAAATTGCTAGCACATGACCA 59.174 39.130 19.17 8.74 0.00 4.02
2750 3620 4.082571 ACTGAAAATTGCTAGCACATGACC 60.083 41.667 19.17 6.10 0.00 4.02
2751 3621 5.051891 ACTGAAAATTGCTAGCACATGAC 57.948 39.130 19.17 9.94 0.00 3.06
2752 3622 5.710513 AACTGAAAATTGCTAGCACATGA 57.289 34.783 19.17 2.40 0.00 3.07
2753 3623 7.543172 ACAATAACTGAAAATTGCTAGCACATG 59.457 33.333 19.17 8.82 36.72 3.21
2756 3626 8.964420 TTACAATAACTGAAAATTGCTAGCAC 57.036 30.769 19.17 6.08 36.72 4.40
2762 3632 9.586435 AGCCTTATTACAATAACTGAAAATTGC 57.414 29.630 0.00 0.00 36.72 3.56
2775 3645 9.749340 ACCAACTAAAAGTAGCCTTATTACAAT 57.251 29.630 0.00 0.00 0.00 2.71
2776 3646 9.577222 AACCAACTAAAAGTAGCCTTATTACAA 57.423 29.630 0.00 0.00 0.00 2.41
2777 3647 9.005777 CAACCAACTAAAAGTAGCCTTATTACA 57.994 33.333 0.00 0.00 0.00 2.41
2779 3649 8.384718 TCCAACCAACTAAAAGTAGCCTTATTA 58.615 33.333 0.00 0.00 0.00 0.98
2780 3650 7.176165 GTCCAACCAACTAAAAGTAGCCTTATT 59.824 37.037 0.00 0.00 0.00 1.40
2781 3651 6.657966 GTCCAACCAACTAAAAGTAGCCTTAT 59.342 38.462 0.00 0.00 0.00 1.73
2782 3652 5.999600 GTCCAACCAACTAAAAGTAGCCTTA 59.000 40.000 0.00 0.00 0.00 2.69
2783 3653 4.825634 GTCCAACCAACTAAAAGTAGCCTT 59.174 41.667 0.00 0.00 0.00 4.35
2784 3654 4.395625 GTCCAACCAACTAAAAGTAGCCT 58.604 43.478 0.00 0.00 0.00 4.58
2786 3656 4.060205 TCGTCCAACCAACTAAAAGTAGC 58.940 43.478 0.00 0.00 0.00 3.58
2787 3657 4.151867 GCTCGTCCAACCAACTAAAAGTAG 59.848 45.833 0.00 0.00 0.00 2.57
2788 3658 4.060205 GCTCGTCCAACCAACTAAAAGTA 58.940 43.478 0.00 0.00 0.00 2.24
2789 3659 2.876550 GCTCGTCCAACCAACTAAAAGT 59.123 45.455 0.00 0.00 0.00 2.66
2790 3660 2.225727 GGCTCGTCCAACCAACTAAAAG 59.774 50.000 0.00 0.00 34.01 2.27
2791 3661 2.158726 AGGCTCGTCCAACCAACTAAAA 60.159 45.455 0.00 0.00 37.29 1.52
2792 3662 1.418637 AGGCTCGTCCAACCAACTAAA 59.581 47.619 0.00 0.00 37.29 1.85
2793 3663 1.001633 GAGGCTCGTCCAACCAACTAA 59.998 52.381 0.00 0.00 37.29 2.24
2796 3666 0.534203 TTGAGGCTCGTCCAACCAAC 60.534 55.000 10.42 0.00 37.29 3.77
2797 3667 0.181587 TTTGAGGCTCGTCCAACCAA 59.818 50.000 10.42 0.00 37.29 3.67
2798 3668 0.181587 TTTTGAGGCTCGTCCAACCA 59.818 50.000 10.42 0.00 37.29 3.67
2799 3669 1.200020 CATTTTGAGGCTCGTCCAACC 59.800 52.381 10.42 0.00 37.29 3.77
2801 3671 0.881118 GCATTTTGAGGCTCGTCCAA 59.119 50.000 10.42 0.00 37.29 3.53
2804 3674 1.226128 GCGCATTTTGAGGCTCGTC 60.226 57.895 10.42 0.00 0.00 4.20
2806 3676 2.100991 GGCGCATTTTGAGGCTCG 59.899 61.111 10.83 0.00 39.50 5.03
2809 3679 2.182537 CAGGGCGCATTTTGAGGC 59.817 61.111 10.83 0.00 41.73 4.70
2811 3681 0.962356 AGGACAGGGCGCATTTTGAG 60.962 55.000 10.83 0.00 0.00 3.02
2812 3682 1.074775 AGGACAGGGCGCATTTTGA 59.925 52.632 10.83 0.00 0.00 2.69
2813 3683 1.213537 CAGGACAGGGCGCATTTTG 59.786 57.895 10.83 3.77 0.00 2.44
2814 3684 1.228552 ACAGGACAGGGCGCATTTT 60.229 52.632 10.83 0.00 0.00 1.82
2815 3685 1.973281 CACAGGACAGGGCGCATTT 60.973 57.895 10.83 0.00 0.00 2.32
2817 3687 4.415150 CCACAGGACAGGGCGCAT 62.415 66.667 10.83 0.00 0.00 4.73
2821 3691 3.146828 AAACCCCACAGGACAGGGC 62.147 63.158 0.00 0.00 45.48 5.19
2823 3693 1.228552 CCAAACCCCACAGGACAGG 60.229 63.158 0.00 0.00 39.89 4.00
2824 3694 1.903404 GCCAAACCCCACAGGACAG 60.903 63.158 0.00 0.00 39.89 3.51
2826 3696 2.600470 GGCCAAACCCCACAGGAC 60.600 66.667 0.00 0.00 39.89 3.85
2828 3698 2.601367 CAGGCCAAACCCCACAGG 60.601 66.667 5.01 0.00 40.58 4.00
2829 3699 2.198426 ACAGGCCAAACCCCACAG 59.802 61.111 5.01 0.00 40.58 3.66
2830 3700 1.646367 TACACAGGCCAAACCCCACA 61.646 55.000 5.01 0.00 40.58 4.17
2831 3701 0.468400 TTACACAGGCCAAACCCCAC 60.468 55.000 5.01 0.00 40.58 4.61
2832 3702 0.261991 TTTACACAGGCCAAACCCCA 59.738 50.000 5.01 0.00 40.58 4.96
2833 3703 1.415200 TTTTACACAGGCCAAACCCC 58.585 50.000 5.01 0.00 40.58 4.95
2834 3704 2.897326 AGATTTTACACAGGCCAAACCC 59.103 45.455 5.01 0.00 40.58 4.11
2835 3705 4.157840 CCTAGATTTTACACAGGCCAAACC 59.842 45.833 5.01 0.00 39.61 3.27
2836 3706 4.157840 CCCTAGATTTTACACAGGCCAAAC 59.842 45.833 5.01 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.