Multiple sequence alignment - TraesCS7A01G490200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G490200 chr7A 100.000 6103 0 0 1 6103 679891951 679898053 0.000000e+00 11271.0
1 TraesCS7A01G490200 chr7A 92.500 40 2 1 5314 5353 679897224 679897262 8.550000e-04 56.5
2 TraesCS7A01G490200 chr7A 92.500 40 2 1 5274 5312 679897264 679897303 8.550000e-04 56.5
3 TraesCS7A01G490200 chr7D 96.318 3992 111 14 1615 5600 588034299 588038260 0.000000e+00 6525.0
4 TraesCS7A01G490200 chr7D 85.417 1008 62 37 585 1540 588033027 588034001 0.000000e+00 968.0
5 TraesCS7A01G490200 chr7D 81.407 398 47 12 194 581 588032584 588032964 3.580000e-77 300.0
6 TraesCS7A01G490200 chr7D 83.186 226 16 9 5895 6103 588038256 588038476 2.900000e-43 187.0
7 TraesCS7A01G490200 chr7D 94.444 36 2 0 5314 5349 588037940 588037975 8.550000e-04 56.5
8 TraesCS7A01G490200 chr7D 92.500 40 2 1 5274 5312 588037980 588038019 8.550000e-04 56.5
9 TraesCS7A01G490200 chr7B 97.443 2073 49 3 2791 4862 660336860 660338929 0.000000e+00 3531.0
10 TraesCS7A01G490200 chr7B 89.128 2226 114 58 624 2793 660334642 660336795 0.000000e+00 2652.0
11 TraesCS7A01G490200 chr7B 88.078 1275 67 26 4861 6103 660339012 660340233 0.000000e+00 1434.0
12 TraesCS7A01G490200 chr7B 89.861 503 43 5 83 581 660249379 660249877 1.850000e-179 640.0
13 TraesCS7A01G490200 chr7B 95.000 60 3 0 5282 5341 660339473 660339532 1.810000e-15 95.3
14 TraesCS7A01G490200 chr7B 94.444 36 2 0 5314 5349 660339425 660339460 8.550000e-04 56.5
15 TraesCS7A01G490200 chr2B 91.765 85 6 1 2537 2621 139078909 139078992 3.860000e-22 117.0
16 TraesCS7A01G490200 chr2B 88.372 86 9 1 2536 2621 754008534 754008450 1.080000e-17 102.0
17 TraesCS7A01G490200 chr1D 90.698 86 7 1 2536 2621 319515749 319515833 5.000000e-21 113.0
18 TraesCS7A01G490200 chr1D 89.412 85 8 1 2537 2621 320589948 320590031 8.370000e-19 106.0
19 TraesCS7A01G490200 chr4A 87.500 96 10 2 2528 2622 567678248 567678342 6.470000e-20 110.0
20 TraesCS7A01G490200 chr4A 87.059 85 10 1 5516 5600 551139985 551140068 1.810000e-15 95.3
21 TraesCS7A01G490200 chr5B 87.097 93 11 1 5515 5607 57921619 57921710 3.010000e-18 104.0
22 TraesCS7A01G490200 chr4D 89.157 83 6 3 2536 2618 127893385 127893464 3.890000e-17 100.0
23 TraesCS7A01G490200 chr5D 84.158 101 10 5 2525 2621 369035549 369035647 6.510000e-15 93.5
24 TraesCS7A01G490200 chr2D 84.444 90 13 1 5515 5604 45475700 45475612 3.030000e-13 87.9
25 TraesCS7A01G490200 chr6B 92.857 42 3 0 5540 5581 42409596 42409555 1.840000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G490200 chr7A 679891951 679898053 6102 False 3794.666667 11271 95.000000 1 6103 3 chr7A.!!$F1 6102
1 TraesCS7A01G490200 chr7D 588032584 588038476 5892 False 1348.833333 6525 88.878667 194 6103 6 chr7D.!!$F1 5909
2 TraesCS7A01G490200 chr7B 660334642 660340233 5591 False 1553.760000 3531 92.818600 624 6103 5 chr7B.!!$F2 5479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.035630 CTGCCAGCTAGTGCCTTCTT 60.036 55.000 0.00 0.0 40.80 2.52 F
1267 1391 0.038618 CCGTGTCGTCAGATCAACCA 60.039 55.000 0.00 0.0 0.00 3.67 F
1350 1477 0.618458 CCGGTCTTTCTGGGAATGGA 59.382 55.000 0.00 0.0 38.86 3.41 F
1606 1734 0.823356 TTTGACTCCTGGCCTGCAAC 60.823 55.000 3.32 0.0 0.00 4.17 F
1788 2139 1.065854 CCGAGCCTCCACTGAAATTCT 60.066 52.381 0.00 0.0 0.00 2.40 F
1887 2239 1.189752 TCTGTCACCATCTCTCTGGC 58.810 55.000 0.00 0.0 40.15 4.85 F
3134 3555 1.064389 AGGGCTAACAATTCTGAGGGC 60.064 52.381 0.00 0.0 0.00 5.19 F
3830 4251 1.468914 GCAAATCTTCCGTTGTCTCCC 59.531 52.381 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1329 1455 0.394352 CATTCCCAGAAAGACCGGGG 60.394 60.000 6.32 0.00 40.68 5.73 R
2123 2475 0.792640 AATGCAGAGAACGCGTGAAG 59.207 50.000 14.98 2.44 0.00 3.02 R
2412 2764 2.135664 ATAGCTGAATACGCACCGAC 57.864 50.000 0.00 0.00 0.00 4.79 R
2602 2955 3.683365 TTTACTCCCTCCGTACCAAAC 57.317 47.619 0.00 0.00 0.00 2.93 R
2979 3400 4.469657 AGGACATAGAACAGAGGAGCTAG 58.530 47.826 0.00 0.00 0.00 3.42 R
3830 4251 3.009473 TCAAGGGAGATTTTCCTGTCAGG 59.991 47.826 13.21 13.21 45.98 3.86 R
4320 4741 0.744771 GGTTCTTCCTCATGACGGGC 60.745 60.000 10.23 0.00 0.00 6.13 R
5424 5934 1.535462 CATGGAAAAGGACACCGACAC 59.465 52.381 0.00 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.756933 ACAGGCATTTTTGCTGATGTT 57.243 38.095 0.00 0.00 34.73 2.71
21 22 4.075963 ACAGGCATTTTTGCTGATGTTT 57.924 36.364 0.00 0.00 34.73 2.83
22 23 4.453751 ACAGGCATTTTTGCTGATGTTTT 58.546 34.783 0.00 0.00 34.73 2.43
23 24 4.512571 ACAGGCATTTTTGCTGATGTTTTC 59.487 37.500 0.00 0.00 34.73 2.29
24 25 4.753107 CAGGCATTTTTGCTGATGTTTTCT 59.247 37.500 0.00 0.00 34.73 2.52
25 26 5.927689 CAGGCATTTTTGCTGATGTTTTCTA 59.072 36.000 0.00 0.00 34.73 2.10
26 27 6.424509 CAGGCATTTTTGCTGATGTTTTCTAA 59.575 34.615 0.00 0.00 34.73 2.10
27 28 7.118680 CAGGCATTTTTGCTGATGTTTTCTAAT 59.881 33.333 0.00 0.00 34.73 1.73
28 29 8.313292 AGGCATTTTTGCTGATGTTTTCTAATA 58.687 29.630 0.00 0.00 34.73 0.98
29 30 8.934825 GGCATTTTTGCTGATGTTTTCTAATAA 58.065 29.630 0.00 0.00 34.73 1.40
58 59 8.969260 ATCAATATACTCAACAATTCTCAGCA 57.031 30.769 0.00 0.00 0.00 4.41
59 60 8.791327 TCAATATACTCAACAATTCTCAGCAA 57.209 30.769 0.00 0.00 0.00 3.91
60 61 8.668353 TCAATATACTCAACAATTCTCAGCAAC 58.332 33.333 0.00 0.00 0.00 4.17
61 62 5.886960 ATACTCAACAATTCTCAGCAACC 57.113 39.130 0.00 0.00 0.00 3.77
62 63 3.825328 ACTCAACAATTCTCAGCAACCT 58.175 40.909 0.00 0.00 0.00 3.50
63 64 3.817647 ACTCAACAATTCTCAGCAACCTC 59.182 43.478 0.00 0.00 0.00 3.85
64 65 4.070716 CTCAACAATTCTCAGCAACCTCT 58.929 43.478 0.00 0.00 0.00 3.69
65 66 4.067896 TCAACAATTCTCAGCAACCTCTC 58.932 43.478 0.00 0.00 0.00 3.20
66 67 4.070716 CAACAATTCTCAGCAACCTCTCT 58.929 43.478 0.00 0.00 0.00 3.10
67 68 3.672808 ACAATTCTCAGCAACCTCTCTG 58.327 45.455 0.00 0.00 0.00 3.35
68 69 2.399916 ATTCTCAGCAACCTCTCTGC 57.600 50.000 0.00 0.00 40.24 4.26
69 70 0.322975 TTCTCAGCAACCTCTCTGCC 59.677 55.000 0.00 0.00 40.86 4.85
70 71 0.833409 TCTCAGCAACCTCTCTGCCA 60.833 55.000 0.00 0.00 40.86 4.92
71 72 0.391395 CTCAGCAACCTCTCTGCCAG 60.391 60.000 0.00 0.00 40.86 4.85
72 73 2.039405 CAGCAACCTCTCTGCCAGC 61.039 63.158 0.00 0.00 40.86 4.85
73 74 2.222727 AGCAACCTCTCTGCCAGCT 61.223 57.895 0.00 0.00 40.86 4.24
74 75 0.906756 AGCAACCTCTCTGCCAGCTA 60.907 55.000 0.00 0.00 40.86 3.32
75 76 0.461693 GCAACCTCTCTGCCAGCTAG 60.462 60.000 0.00 0.00 33.51 3.42
76 77 0.901124 CAACCTCTCTGCCAGCTAGT 59.099 55.000 0.00 0.00 0.00 2.57
77 78 0.901124 AACCTCTCTGCCAGCTAGTG 59.099 55.000 0.00 0.00 0.00 2.74
78 79 1.143620 CCTCTCTGCCAGCTAGTGC 59.856 63.158 0.00 0.00 40.05 4.40
79 80 1.143620 CTCTCTGCCAGCTAGTGCC 59.856 63.158 0.00 0.00 40.80 5.01
80 81 1.305633 TCTCTGCCAGCTAGTGCCT 60.306 57.895 0.00 0.00 40.80 4.75
81 82 0.906756 TCTCTGCCAGCTAGTGCCTT 60.907 55.000 0.00 0.00 40.80 4.35
82 83 0.461693 CTCTGCCAGCTAGTGCCTTC 60.462 60.000 0.00 0.00 40.80 3.46
83 84 0.906756 TCTGCCAGCTAGTGCCTTCT 60.907 55.000 0.00 0.00 40.80 2.85
84 85 0.035630 CTGCCAGCTAGTGCCTTCTT 60.036 55.000 0.00 0.00 40.80 2.52
85 86 1.208052 CTGCCAGCTAGTGCCTTCTTA 59.792 52.381 0.00 0.00 40.80 2.10
86 87 1.066143 TGCCAGCTAGTGCCTTCTTAC 60.066 52.381 0.00 0.00 40.80 2.34
87 88 1.208293 GCCAGCTAGTGCCTTCTTACT 59.792 52.381 0.00 0.00 40.80 2.24
88 89 2.431057 GCCAGCTAGTGCCTTCTTACTA 59.569 50.000 0.00 0.00 40.80 1.82
89 90 3.491792 GCCAGCTAGTGCCTTCTTACTAG 60.492 52.174 0.00 0.00 45.75 2.57
92 93 3.737032 CTAGTGCCTTCTTACTAGCCC 57.263 52.381 0.00 0.00 39.73 5.19
93 94 0.824759 AGTGCCTTCTTACTAGCCCG 59.175 55.000 0.00 0.00 0.00 6.13
94 95 0.822164 GTGCCTTCTTACTAGCCCGA 59.178 55.000 0.00 0.00 0.00 5.14
95 96 1.413077 GTGCCTTCTTACTAGCCCGAT 59.587 52.381 0.00 0.00 0.00 4.18
96 97 2.626743 GTGCCTTCTTACTAGCCCGATA 59.373 50.000 0.00 0.00 0.00 2.92
97 98 2.626743 TGCCTTCTTACTAGCCCGATAC 59.373 50.000 0.00 0.00 0.00 2.24
98 99 2.626743 GCCTTCTTACTAGCCCGATACA 59.373 50.000 0.00 0.00 0.00 2.29
99 100 3.305471 GCCTTCTTACTAGCCCGATACAG 60.305 52.174 0.00 0.00 0.00 2.74
100 101 3.256136 CCTTCTTACTAGCCCGATACAGG 59.744 52.174 0.00 0.00 0.00 4.00
101 102 3.589951 TCTTACTAGCCCGATACAGGT 57.410 47.619 0.00 0.00 0.00 4.00
102 103 3.220110 TCTTACTAGCCCGATACAGGTG 58.780 50.000 0.00 0.00 0.00 4.00
103 104 2.742428 TACTAGCCCGATACAGGTGT 57.258 50.000 0.00 0.00 0.00 4.16
104 105 1.861982 ACTAGCCCGATACAGGTGTT 58.138 50.000 0.00 0.00 0.00 3.32
105 106 1.480954 ACTAGCCCGATACAGGTGTTG 59.519 52.381 0.00 0.00 0.00 3.33
106 107 1.754803 CTAGCCCGATACAGGTGTTGA 59.245 52.381 0.00 0.00 0.00 3.18
107 108 0.537188 AGCCCGATACAGGTGTTGAG 59.463 55.000 0.00 0.00 0.00 3.02
108 109 0.535335 GCCCGATACAGGTGTTGAGA 59.465 55.000 0.00 0.00 0.00 3.27
109 110 1.471676 GCCCGATACAGGTGTTGAGAG 60.472 57.143 0.00 0.00 0.00 3.20
110 111 2.100197 CCCGATACAGGTGTTGAGAGA 58.900 52.381 0.00 0.00 0.00 3.10
111 112 2.099921 CCCGATACAGGTGTTGAGAGAG 59.900 54.545 0.00 0.00 0.00 3.20
112 113 2.480416 CCGATACAGGTGTTGAGAGAGC 60.480 54.545 0.00 0.00 0.00 4.09
113 114 2.480416 CGATACAGGTGTTGAGAGAGCC 60.480 54.545 0.00 0.00 0.00 4.70
114 115 1.267121 TACAGGTGTTGAGAGAGCCC 58.733 55.000 0.00 0.00 0.00 5.19
115 116 1.298014 CAGGTGTTGAGAGAGCCCC 59.702 63.158 0.00 0.00 0.00 5.80
116 117 1.152030 AGGTGTTGAGAGAGCCCCA 60.152 57.895 0.00 0.00 0.00 4.96
117 118 0.768221 AGGTGTTGAGAGAGCCCCAA 60.768 55.000 0.00 0.00 0.00 4.12
118 119 0.110486 GGTGTTGAGAGAGCCCCAAA 59.890 55.000 0.00 0.00 0.00 3.28
119 120 1.272147 GGTGTTGAGAGAGCCCCAAAT 60.272 52.381 0.00 0.00 0.00 2.32
120 121 2.087646 GTGTTGAGAGAGCCCCAAATC 58.912 52.381 0.00 0.00 0.00 2.17
121 122 1.004745 TGTTGAGAGAGCCCCAAATCC 59.995 52.381 0.00 0.00 0.00 3.01
122 123 0.625849 TTGAGAGAGCCCCAAATCCC 59.374 55.000 0.00 0.00 0.00 3.85
123 124 0.549902 TGAGAGAGCCCCAAATCCCA 60.550 55.000 0.00 0.00 0.00 4.37
124 125 0.106967 GAGAGAGCCCCAAATCCCAC 60.107 60.000 0.00 0.00 0.00 4.61
125 126 0.846427 AGAGAGCCCCAAATCCCACA 60.846 55.000 0.00 0.00 0.00 4.17
126 127 0.259938 GAGAGCCCCAAATCCCACAT 59.740 55.000 0.00 0.00 0.00 3.21
127 128 0.259938 AGAGCCCCAAATCCCACATC 59.740 55.000 0.00 0.00 0.00 3.06
128 129 0.756815 GAGCCCCAAATCCCACATCC 60.757 60.000 0.00 0.00 0.00 3.51
129 130 1.762063 GCCCCAAATCCCACATCCC 60.762 63.158 0.00 0.00 0.00 3.85
130 131 1.702840 CCCCAAATCCCACATCCCA 59.297 57.895 0.00 0.00 0.00 4.37
131 132 0.265553 CCCCAAATCCCACATCCCAT 59.734 55.000 0.00 0.00 0.00 4.00
132 133 1.708341 CCCAAATCCCACATCCCATC 58.292 55.000 0.00 0.00 0.00 3.51
133 134 1.321474 CCAAATCCCACATCCCATCG 58.679 55.000 0.00 0.00 0.00 3.84
134 135 0.670162 CAAATCCCACATCCCATCGC 59.330 55.000 0.00 0.00 0.00 4.58
135 136 0.819259 AAATCCCACATCCCATCGCG 60.819 55.000 0.00 0.00 0.00 5.87
136 137 1.983119 AATCCCACATCCCATCGCGT 61.983 55.000 5.77 0.00 0.00 6.01
137 138 2.665008 ATCCCACATCCCATCGCGTG 62.665 60.000 5.77 3.64 0.00 5.34
138 139 2.125147 CCACATCCCATCGCGTGT 60.125 61.111 5.77 0.00 0.00 4.49
139 140 1.745115 CCACATCCCATCGCGTGTT 60.745 57.895 5.77 0.00 0.00 3.32
140 141 1.425031 CACATCCCATCGCGTGTTG 59.575 57.895 5.77 2.54 0.00 3.33
141 142 2.398554 ACATCCCATCGCGTGTTGC 61.399 57.895 5.77 0.00 41.47 4.17
142 143 2.108514 CATCCCATCGCGTGTTGCT 61.109 57.895 5.77 0.00 43.27 3.91
143 144 2.108514 ATCCCATCGCGTGTTGCTG 61.109 57.895 5.77 0.00 43.27 4.41
144 145 3.803082 CCCATCGCGTGTTGCTGG 61.803 66.667 5.77 4.91 43.27 4.85
145 146 2.741985 CCATCGCGTGTTGCTGGA 60.742 61.111 5.77 0.00 40.48 3.86
146 147 2.743752 CCATCGCGTGTTGCTGGAG 61.744 63.158 5.77 0.00 40.48 3.86
147 148 1.737735 CATCGCGTGTTGCTGGAGA 60.738 57.895 5.77 0.00 43.27 3.71
148 149 1.005037 ATCGCGTGTTGCTGGAGAA 60.005 52.632 5.77 0.00 43.27 2.87
149 150 0.602638 ATCGCGTGTTGCTGGAGAAA 60.603 50.000 5.77 0.00 43.27 2.52
150 151 0.812014 TCGCGTGTTGCTGGAGAAAA 60.812 50.000 5.77 0.00 43.27 2.29
151 152 0.657368 CGCGTGTTGCTGGAGAAAAC 60.657 55.000 0.00 0.00 43.27 2.43
152 153 0.380378 GCGTGTTGCTGGAGAAAACA 59.620 50.000 0.00 0.00 41.73 2.83
153 154 1.001378 GCGTGTTGCTGGAGAAAACAT 60.001 47.619 0.00 0.00 41.73 2.71
154 155 2.918131 GCGTGTTGCTGGAGAAAACATC 60.918 50.000 0.00 0.00 41.73 3.06
155 156 2.290367 CGTGTTGCTGGAGAAAACATCA 59.710 45.455 0.00 0.00 36.31 3.07
156 157 3.607775 CGTGTTGCTGGAGAAAACATCAG 60.608 47.826 0.00 0.00 36.31 2.90
157 158 3.565482 GTGTTGCTGGAGAAAACATCAGA 59.435 43.478 0.00 0.00 36.31 3.27
158 159 4.036734 GTGTTGCTGGAGAAAACATCAGAA 59.963 41.667 0.00 0.00 36.31 3.02
159 160 4.276678 TGTTGCTGGAGAAAACATCAGAAG 59.723 41.667 0.00 0.00 0.00 2.85
160 161 4.090761 TGCTGGAGAAAACATCAGAAGT 57.909 40.909 0.00 0.00 0.00 3.01
161 162 5.227569 TGCTGGAGAAAACATCAGAAGTA 57.772 39.130 0.00 0.00 0.00 2.24
162 163 5.240891 TGCTGGAGAAAACATCAGAAGTAG 58.759 41.667 0.00 0.00 0.00 2.57
163 164 4.633565 GCTGGAGAAAACATCAGAAGTAGG 59.366 45.833 0.00 0.00 0.00 3.18
164 165 4.579869 TGGAGAAAACATCAGAAGTAGGC 58.420 43.478 0.00 0.00 0.00 3.93
165 166 4.287067 TGGAGAAAACATCAGAAGTAGGCT 59.713 41.667 0.00 0.00 0.00 4.58
166 167 4.633565 GGAGAAAACATCAGAAGTAGGCTG 59.366 45.833 0.00 0.00 34.71 4.85
167 168 5.482908 GAGAAAACATCAGAAGTAGGCTGA 58.517 41.667 0.00 0.00 45.52 4.26
168 169 5.486526 AGAAAACATCAGAAGTAGGCTGAG 58.513 41.667 0.00 0.00 44.75 3.35
169 170 5.247110 AGAAAACATCAGAAGTAGGCTGAGA 59.753 40.000 0.00 0.00 44.75 3.27
170 171 5.489792 AAACATCAGAAGTAGGCTGAGAA 57.510 39.130 0.00 0.00 44.75 2.87
171 172 5.690464 AACATCAGAAGTAGGCTGAGAAT 57.310 39.130 0.00 0.00 44.75 2.40
172 173 5.275067 ACATCAGAAGTAGGCTGAGAATC 57.725 43.478 0.00 0.00 44.75 2.52
173 174 4.961730 ACATCAGAAGTAGGCTGAGAATCT 59.038 41.667 0.00 0.00 44.75 2.40
174 175 5.068987 ACATCAGAAGTAGGCTGAGAATCTC 59.931 44.000 2.75 2.75 44.75 2.75
175 176 4.604156 TCAGAAGTAGGCTGAGAATCTCA 58.396 43.478 12.87 12.87 37.46 3.27
176 177 5.207354 TCAGAAGTAGGCTGAGAATCTCAT 58.793 41.667 13.93 1.62 39.92 2.90
177 178 5.301551 TCAGAAGTAGGCTGAGAATCTCATC 59.698 44.000 13.93 9.53 39.92 2.92
178 179 4.278170 AGAAGTAGGCTGAGAATCTCATCG 59.722 45.833 13.93 4.29 39.92 3.84
179 180 2.295909 AGTAGGCTGAGAATCTCATCGC 59.704 50.000 13.93 13.96 39.92 4.58
180 181 0.392336 AGGCTGAGAATCTCATCGCC 59.608 55.000 26.72 26.72 45.96 5.54
181 182 0.392336 GGCTGAGAATCTCATCGCCT 59.608 55.000 26.72 0.00 43.80 5.52
182 183 1.500108 GCTGAGAATCTCATCGCCTG 58.500 55.000 13.93 2.05 39.92 4.85
183 184 1.500108 CTGAGAATCTCATCGCCTGC 58.500 55.000 13.93 0.00 39.92 4.85
184 185 0.826062 TGAGAATCTCATCGCCTGCA 59.174 50.000 9.18 0.00 35.39 4.41
185 186 1.415289 TGAGAATCTCATCGCCTGCAT 59.585 47.619 9.18 0.00 35.39 3.96
186 187 2.629617 TGAGAATCTCATCGCCTGCATA 59.370 45.455 9.18 0.00 35.39 3.14
187 188 3.260128 TGAGAATCTCATCGCCTGCATAT 59.740 43.478 9.18 0.00 35.39 1.78
188 189 3.597255 AGAATCTCATCGCCTGCATATG 58.403 45.455 0.00 0.00 0.00 1.78
189 190 2.398252 ATCTCATCGCCTGCATATGG 57.602 50.000 4.56 0.00 0.00 2.74
190 191 0.322648 TCTCATCGCCTGCATATGGG 59.677 55.000 4.56 0.00 0.00 4.00
191 192 1.302752 TCATCGCCTGCATATGGGC 60.303 57.895 11.79 11.79 44.43 5.36
219 220 3.057315 CACACCACCTTCAAATCCATGTC 60.057 47.826 0.00 0.00 0.00 3.06
225 226 2.616960 CTTCAAATCCATGTCGTCGGA 58.383 47.619 0.00 0.00 35.27 4.55
279 280 8.212995 ACAACCAGATCAAAATTTTCCAAATCT 58.787 29.630 0.00 4.93 0.00 2.40
280 281 8.500773 CAACCAGATCAAAATTTTCCAAATCTG 58.499 33.333 21.49 21.49 38.75 2.90
288 289 2.132740 TTTCCAAATCTGCACAACGC 57.867 45.000 0.00 0.00 42.89 4.84
289 290 1.317613 TTCCAAATCTGCACAACGCT 58.682 45.000 0.00 0.00 43.06 5.07
290 291 1.317613 TCCAAATCTGCACAACGCTT 58.682 45.000 0.00 0.00 43.06 4.68
291 292 2.499197 TCCAAATCTGCACAACGCTTA 58.501 42.857 0.00 0.00 43.06 3.09
300 301 2.095768 TGCACAACGCTTAAGAGATTGC 60.096 45.455 13.55 16.10 43.06 3.56
318 319 1.136147 CTGTCATTGCAAGCGCCTC 59.864 57.895 2.29 0.00 37.32 4.70
322 323 2.358615 ATTGCAAGCGCCTCGTCA 60.359 55.556 2.29 0.00 37.32 4.35
339 340 2.417787 CGTCATGAGACAGCTTGATCCA 60.418 50.000 0.00 0.00 45.23 3.41
347 348 2.025727 GCTTGATCCAGCGCATGC 59.974 61.111 11.47 7.91 43.24 4.06
351 352 2.280119 GATCCAGCGCATGCCGTA 60.280 61.111 13.15 0.00 44.31 4.02
356 357 3.585990 AGCGCATGCCGTATTGCC 61.586 61.111 13.15 0.00 44.31 4.52
357 358 4.962122 GCGCATGCCGTATTGCCG 62.962 66.667 13.15 0.00 39.71 5.69
358 359 3.572539 CGCATGCCGTATTGCCGT 61.573 61.111 13.15 0.00 0.00 5.68
359 360 2.327940 GCATGCCGTATTGCCGTC 59.672 61.111 6.36 0.00 0.00 4.79
379 384 0.252742 GGGGAAGAGGGGTTGAGAGA 60.253 60.000 0.00 0.00 0.00 3.10
389 394 0.811281 GGTTGAGAGAAAATGGGCCG 59.189 55.000 0.00 0.00 0.00 6.13
396 401 1.153389 GAAAATGGGCCGGGCAATG 60.153 57.895 30.95 0.00 0.00 2.82
398 403 2.182732 AAAATGGGCCGGGCAATGTG 62.183 55.000 30.95 0.00 0.00 3.21
401 406 3.758931 GGGCCGGGCAATGTGTTC 61.759 66.667 30.95 5.52 0.00 3.18
402 407 2.988684 GGCCGGGCAATGTGTTCA 60.989 61.111 25.33 0.00 0.00 3.18
407 412 1.139163 CGGGCAATGTGTTCAAAAGC 58.861 50.000 0.00 0.00 0.00 3.51
408 413 1.511850 GGGCAATGTGTTCAAAAGCC 58.488 50.000 0.00 0.00 37.76 4.35
411 416 3.055891 GGGCAATGTGTTCAAAAGCCTAT 60.056 43.478 0.00 0.00 38.21 2.57
416 421 7.362574 GGCAATGTGTTCAAAAGCCTATAACTA 60.363 37.037 0.00 0.00 36.55 2.24
427 432 7.939784 AAAGCCTATAACTAAAGAAGGGTTG 57.060 36.000 5.01 0.00 44.87 3.77
428 433 6.002653 AGCCTATAACTAAAGAAGGGTTGG 57.997 41.667 0.00 0.00 34.49 3.77
429 434 5.729718 AGCCTATAACTAAAGAAGGGTTGGA 59.270 40.000 0.00 0.00 34.49 3.53
431 436 6.542735 GCCTATAACTAAAGAAGGGTTGGAAG 59.457 42.308 0.00 0.00 0.00 3.46
432 437 6.542735 CCTATAACTAAAGAAGGGTTGGAAGC 59.457 42.308 0.00 0.00 0.00 3.86
440 445 2.873797 GGGTTGGAAGCCATGAGAC 58.126 57.895 2.66 0.00 45.72 3.36
441 446 0.329596 GGGTTGGAAGCCATGAGACT 59.670 55.000 2.66 0.00 45.72 3.24
442 447 1.457346 GGTTGGAAGCCATGAGACTG 58.543 55.000 0.00 0.00 31.53 3.51
443 448 1.457346 GTTGGAAGCCATGAGACTGG 58.543 55.000 0.00 0.00 39.45 4.00
444 449 0.329261 TTGGAAGCCATGAGACTGGG 59.671 55.000 0.00 0.00 36.75 4.45
445 450 0.547471 TGGAAGCCATGAGACTGGGA 60.547 55.000 0.00 0.00 36.75 4.37
446 451 0.842635 GGAAGCCATGAGACTGGGAT 59.157 55.000 0.00 0.00 36.75 3.85
447 452 1.202746 GGAAGCCATGAGACTGGGATC 60.203 57.143 0.00 0.00 36.75 3.36
448 453 1.767681 GAAGCCATGAGACTGGGATCT 59.232 52.381 0.00 0.00 36.75 2.75
449 454 1.422531 AGCCATGAGACTGGGATCTC 58.577 55.000 0.00 0.00 44.68 2.75
450 455 1.062275 AGCCATGAGACTGGGATCTCT 60.062 52.381 0.00 0.00 44.71 3.10
451 456 1.767681 GCCATGAGACTGGGATCTCTT 59.232 52.381 0.00 0.00 44.71 2.85
452 457 2.968574 GCCATGAGACTGGGATCTCTTA 59.031 50.000 0.00 0.00 44.71 2.10
469 474 7.038729 GGATCTCTTAGGATCATGTGGTATCAA 60.039 40.741 11.02 0.00 42.63 2.57
472 477 6.291377 TCTTAGGATCATGTGGTATCAAAGC 58.709 40.000 0.00 0.00 0.00 3.51
479 484 3.737559 TGTGGTATCAAAGCCCTTCAT 57.262 42.857 0.00 0.00 0.00 2.57
480 485 3.355378 TGTGGTATCAAAGCCCTTCATG 58.645 45.455 0.00 0.00 0.00 3.07
490 495 0.535780 GCCCTTCATGGATCATCGCA 60.536 55.000 0.00 0.00 38.35 5.10
495 500 2.914695 TCATGGATCATCGCATGTCA 57.085 45.000 12.98 0.00 31.46 3.58
505 510 2.112380 TCGCATGTCACATTGTGGAT 57.888 45.000 16.46 6.67 33.87 3.41
517 522 5.241403 ACATTGTGGATGTACAGAGGAAA 57.759 39.130 0.33 0.00 47.00 3.13
523 528 3.327757 TGGATGTACAGAGGAAAGCAAGT 59.672 43.478 0.33 0.00 0.00 3.16
533 538 2.010497 GGAAAGCAAGTCGAATCCTCC 58.990 52.381 0.00 0.00 0.00 4.30
539 544 4.843728 AGCAAGTCGAATCCTCCATAAAA 58.156 39.130 0.00 0.00 0.00 1.52
540 545 4.878397 AGCAAGTCGAATCCTCCATAAAAG 59.122 41.667 0.00 0.00 0.00 2.27
542 547 5.529060 GCAAGTCGAATCCTCCATAAAAGAT 59.471 40.000 0.00 0.00 0.00 2.40
543 548 6.293135 GCAAGTCGAATCCTCCATAAAAGATC 60.293 42.308 0.00 0.00 0.00 2.75
544 549 5.533482 AGTCGAATCCTCCATAAAAGATCG 58.467 41.667 0.00 0.00 0.00 3.69
545 550 5.302059 AGTCGAATCCTCCATAAAAGATCGA 59.698 40.000 0.00 0.00 0.00 3.59
547 552 7.176865 AGTCGAATCCTCCATAAAAGATCGATA 59.823 37.037 0.00 0.00 0.00 2.92
549 554 8.029522 TCGAATCCTCCATAAAAGATCGATAAG 58.970 37.037 0.00 0.00 0.00 1.73
551 556 9.364989 GAATCCTCCATAAAAGATCGATAAGAG 57.635 37.037 0.00 0.00 0.00 2.85
552 557 7.841282 TCCTCCATAAAAGATCGATAAGAGT 57.159 36.000 0.00 0.00 0.00 3.24
553 558 8.251383 TCCTCCATAAAAGATCGATAAGAGTT 57.749 34.615 0.00 0.00 0.00 3.01
554 559 8.144478 TCCTCCATAAAAGATCGATAAGAGTTG 58.856 37.037 0.00 0.00 0.00 3.16
555 560 8.144478 CCTCCATAAAAGATCGATAAGAGTTGA 58.856 37.037 0.00 0.00 0.00 3.18
556 561 9.534565 CTCCATAAAAGATCGATAAGAGTTGAA 57.465 33.333 0.00 0.00 0.00 2.69
557 562 9.314321 TCCATAAAAGATCGATAAGAGTTGAAC 57.686 33.333 0.00 0.00 0.00 3.18
589 654 7.429636 TTTCGAACCGTGAAAAAGATTCTAT 57.570 32.000 0.00 0.00 32.70 1.98
600 665 9.118236 GTGAAAAAGATTCTATGTGTTAGTTGC 57.882 33.333 0.00 0.00 0.00 4.17
609 674 1.270094 TGTGTTAGTTGCGAGTCAGGG 60.270 52.381 0.00 0.00 0.00 4.45
615 680 2.154462 AGTTGCGAGTCAGGGATTTTG 58.846 47.619 0.00 0.00 0.00 2.44
619 684 3.218453 TGCGAGTCAGGGATTTTGAAAA 58.782 40.909 0.00 0.00 0.00 2.29
620 685 3.004315 TGCGAGTCAGGGATTTTGAAAAC 59.996 43.478 0.00 0.00 0.00 2.43
631 696 5.237815 GGATTTTGAAAACCCCACTGATTC 58.762 41.667 0.00 0.00 0.00 2.52
633 698 4.935352 TTTGAAAACCCCACTGATTCTG 57.065 40.909 0.00 0.00 0.00 3.02
639 704 4.927267 AACCCCACTGATTCTGTTCATA 57.073 40.909 0.00 0.00 0.00 2.15
642 707 5.440610 ACCCCACTGATTCTGTTCATATTC 58.559 41.667 0.00 0.00 0.00 1.75
670 736 9.234384 GCAAAAATTGATGATGTTCTAGAGATG 57.766 33.333 0.00 0.00 0.00 2.90
686 753 1.739466 AGATGTAGTGCATTTGCCACG 59.261 47.619 0.00 0.00 41.18 4.94
790 875 4.144727 TCCCTCCCTCCCTCGCTC 62.145 72.222 0.00 0.00 0.00 5.03
868 953 0.043485 AAGAAGGTCTCCTCCCTCCC 59.957 60.000 0.00 0.00 30.89 4.30
869 954 0.858139 AGAAGGTCTCCTCCCTCCCT 60.858 60.000 0.00 0.00 30.89 4.20
870 955 0.397957 GAAGGTCTCCTCCCTCCCTC 60.398 65.000 0.00 0.00 30.89 4.30
871 956 1.892441 AAGGTCTCCTCCCTCCCTCC 61.892 65.000 0.00 0.00 30.89 4.30
872 957 2.284151 GTCTCCTCCCTCCCTCCC 59.716 72.222 0.00 0.00 0.00 4.30
873 958 2.133201 TCTCCTCCCTCCCTCCCT 59.867 66.667 0.00 0.00 0.00 4.20
874 959 2.015726 TCTCCTCCCTCCCTCCCTC 61.016 68.421 0.00 0.00 0.00 4.30
875 960 3.036959 TCCTCCCTCCCTCCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
1226 1347 1.803943 CTGAGCTACGCGGAGAGTT 59.196 57.895 25.84 8.40 37.08 3.01
1227 1348 0.524392 CTGAGCTACGCGGAGAGTTG 60.524 60.000 25.84 4.88 37.08 3.16
1235 1358 2.262915 CGGAGAGTTGCCGCTTCT 59.737 61.111 0.00 0.00 42.55 2.85
1240 1363 1.604278 GAGAGTTGCCGCTTCTGTTTT 59.396 47.619 0.00 0.00 0.00 2.43
1267 1391 0.038618 CCGTGTCGTCAGATCAACCA 60.039 55.000 0.00 0.00 0.00 3.67
1277 1401 3.619038 GTCAGATCAACCAACCGAATCTC 59.381 47.826 0.00 0.00 0.00 2.75
1295 1419 4.876081 CTGCTTTGATCGGCGCGC 62.876 66.667 25.94 25.94 0.00 6.86
1300 1424 2.308450 CTTTGATCGGCGCGCATGAA 62.308 55.000 34.42 16.41 0.00 2.57
1301 1425 2.308450 TTTGATCGGCGCGCATGAAG 62.308 55.000 34.42 17.55 0.00 3.02
1327 1453 8.543862 AAAAAGAAGATCAAAATTCAGGCATC 57.456 30.769 0.00 0.00 0.00 3.91
1329 1455 3.705043 AGATCAAAATTCAGGCATCGC 57.295 42.857 0.00 0.00 0.00 4.58
1349 1476 3.175133 CCGGTCTTTCTGGGAATGG 57.825 57.895 0.00 0.00 38.86 3.16
1350 1477 0.618458 CCGGTCTTTCTGGGAATGGA 59.382 55.000 0.00 0.00 38.86 3.41
1351 1478 1.407437 CCGGTCTTTCTGGGAATGGAG 60.407 57.143 0.00 0.00 38.86 3.86
1352 1479 1.279271 CGGTCTTTCTGGGAATGGAGT 59.721 52.381 0.00 0.00 0.00 3.85
1353 1480 2.678190 CGGTCTTTCTGGGAATGGAGTC 60.678 54.545 0.00 0.00 0.00 3.36
1356 1483 4.568592 GGTCTTTCTGGGAATGGAGTCAAT 60.569 45.833 0.00 0.00 0.00 2.57
1359 1486 2.561187 TCTGGGAATGGAGTCAATGGA 58.439 47.619 0.00 0.00 0.00 3.41
1374 1501 5.615289 GTCAATGGACTATTGCTATCCTGT 58.385 41.667 6.66 0.00 44.69 4.00
1403 1530 6.071952 AGTGTTTGATTCGGCTCAATGTTAAT 60.072 34.615 2.16 0.00 35.20 1.40
1404 1531 6.586082 GTGTTTGATTCGGCTCAATGTTAATT 59.414 34.615 2.16 0.00 35.20 1.40
1406 1533 8.300286 TGTTTGATTCGGCTCAATGTTAATTAA 58.700 29.630 0.00 0.00 35.20 1.40
1480 1607 1.880601 GCGTGCTAATCATCGCGAGG 61.881 60.000 15.81 15.81 38.34 4.63
1497 1624 4.109050 GCGAGGAGTTACATTTCTCTGAG 58.891 47.826 0.00 0.00 0.00 3.35
1507 1634 8.457261 AGTTACATTTCTCTGAGCATTCATTTC 58.543 33.333 0.00 0.00 31.68 2.17
1521 1648 7.775120 AGCATTCATTTCCCTAGTTATTGTTG 58.225 34.615 0.00 0.00 0.00 3.33
1540 1667 7.712264 TTGTTGCAAGGAATTTGTAAATCAG 57.288 32.000 0.00 0.00 41.95 2.90
1543 1670 7.224362 TGTTGCAAGGAATTTGTAAATCAGTTG 59.776 33.333 0.00 0.00 41.95 3.16
1556 1683 4.417426 AATCAGTTGTTATCGTAGGGGG 57.583 45.455 0.00 0.00 0.00 5.40
1588 1716 2.633481 AGTCTGTTAGCTTCGAGGGTTT 59.367 45.455 4.04 0.00 0.00 3.27
1606 1734 0.823356 TTTGACTCCTGGCCTGCAAC 60.823 55.000 3.32 0.00 0.00 4.17
1609 1737 2.116983 GACTCCTGGCCTGCAACTGA 62.117 60.000 3.32 0.00 0.00 3.41
1612 1740 1.303888 CCTGGCCTGCAACTGATGT 60.304 57.895 3.32 0.00 0.00 3.06
1628 1978 7.323656 GCAACTGATGTTTGTTGTTGTAGATAC 59.676 37.037 0.00 0.00 43.66 2.24
1676 2026 1.696884 GATCCCCATCTCTCCAAGGAC 59.303 57.143 0.00 0.00 0.00 3.85
1709 2059 5.189180 GCTCCTAATCTTGTTGTGGAGAAT 58.811 41.667 10.58 0.00 42.48 2.40
1788 2139 1.065854 CCGAGCCTCCACTGAAATTCT 60.066 52.381 0.00 0.00 0.00 2.40
1887 2239 1.189752 TCTGTCACCATCTCTCTGGC 58.810 55.000 0.00 0.00 40.15 4.85
2112 2464 3.469008 TGTATCCTCGGCAATACAAGG 57.531 47.619 0.00 0.00 35.87 3.61
2123 2475 6.640518 TCGGCAATACAAGGAAGATATATCC 58.359 40.000 9.18 0.00 37.22 2.59
2176 2528 4.219944 AGCATGAAGACATTCAGTTGCATT 59.780 37.500 15.19 0.00 46.71 3.56
2177 2529 5.849907 AGCATGAAGACATTCAGTTGCATTG 60.850 40.000 15.19 0.00 46.71 2.82
2178 2530 3.904571 TGAAGACATTCAGTTGCATTGC 58.095 40.909 0.46 0.46 40.54 3.56
2179 2531 3.318557 TGAAGACATTCAGTTGCATTGCA 59.681 39.130 7.38 7.38 40.54 4.08
2182 2534 3.508402 AGACATTCAGTTGCATTGCATCA 59.492 39.130 19.08 0.88 38.76 3.07
2183 2535 3.845178 ACATTCAGTTGCATTGCATCAG 58.155 40.909 19.08 12.64 38.76 2.90
2184 2536 2.357327 TTCAGTTGCATTGCATCAGC 57.643 45.000 19.08 8.23 38.76 4.26
2185 2537 1.541379 TCAGTTGCATTGCATCAGCT 58.459 45.000 19.08 10.05 42.74 4.24
2186 2538 1.471287 TCAGTTGCATTGCATCAGCTC 59.529 47.619 19.08 4.95 42.74 4.09
2187 2539 1.472878 CAGTTGCATTGCATCAGCTCT 59.527 47.619 19.08 6.76 42.74 4.09
2188 2540 2.094700 CAGTTGCATTGCATCAGCTCTT 60.095 45.455 19.08 0.00 42.74 2.85
2412 2764 6.652062 AGTTTGGGTATAAACAAGGTAAGTCG 59.348 38.462 0.00 0.00 41.76 4.18
2467 2820 3.737559 TGGCCTAACATTGTGGAATCT 57.262 42.857 3.32 0.00 0.00 2.40
2499 2852 5.106791 GCTGCAGAGCCTACAATATGTTATG 60.107 44.000 20.43 0.00 39.57 1.90
2838 3259 5.241403 TCTTTCCCACATGTGTAACTCAT 57.759 39.130 23.79 0.00 38.04 2.90
2979 3400 4.095483 CACTTACAGGAATGCATGAACTCC 59.905 45.833 0.00 3.03 0.00 3.85
3134 3555 1.064389 AGGGCTAACAATTCTGAGGGC 60.064 52.381 0.00 0.00 0.00 5.19
3370 3791 2.950309 GTCCTGCATCAGAATCAAGCAT 59.050 45.455 0.00 0.00 34.35 3.79
3830 4251 1.468914 GCAAATCTTCCGTTGTCTCCC 59.531 52.381 0.00 0.00 0.00 4.30
3969 4390 5.048991 GGATTTTTAAGAAGAAGCGTGTCCA 60.049 40.000 0.00 0.00 0.00 4.02
4343 4764 2.355108 CCGTCATGAGGAAGAACCATGT 60.355 50.000 16.84 0.00 42.04 3.21
4380 4801 4.385199 CCAAGGTGGTTAATGAGCCAGATA 60.385 45.833 0.00 0.00 35.14 1.98
4422 4843 1.905215 AGACTGATGAACCCTGTCAGG 59.095 52.381 12.40 12.40 42.75 3.86
4459 4880 4.271776 TGATGAAGCAGCAATTACAGATCG 59.728 41.667 0.00 0.00 0.00 3.69
4663 5084 3.290948 TGTTACTGCCACCTGAACTTT 57.709 42.857 0.00 0.00 0.00 2.66
4692 5113 7.377397 GCAACACATCACTGTTATTTTCGTAAA 59.623 33.333 0.00 0.00 32.90 2.01
4750 5171 6.879276 AGGTTTTGTTAAAGCTCCTACTTC 57.121 37.500 0.00 0.00 46.22 3.01
4762 5183 3.679389 CTCCTACTTCATGTTGGTGCTT 58.321 45.455 0.00 0.00 41.34 3.91
4996 5504 6.687081 TGAACTACACTTTCGACCAAATTT 57.313 33.333 0.00 0.00 0.00 1.82
4999 5507 6.549912 ACTACACTTTCGACCAAATTTACC 57.450 37.500 0.00 0.00 0.00 2.85
5122 5630 7.752239 TGTTTAACTAGTACAACGTCTATCTGC 59.248 37.037 0.00 0.00 0.00 4.26
5124 5632 5.738118 ACTAGTACAACGTCTATCTGCTC 57.262 43.478 0.00 0.00 0.00 4.26
5210 5718 6.013379 AGACCTCCAAATCAATTGTCTAGTGA 60.013 38.462 5.13 0.00 37.32 3.41
5261 5769 6.070251 TGTGTACATGATCCAGTAACCTGATT 60.070 38.462 0.00 0.00 41.50 2.57
5311 5820 3.953612 TCTTGGCTGGCTGTAAATAATGG 59.046 43.478 2.00 0.00 0.00 3.16
5357 5866 4.683400 GCTGGCTGTAAATAAGTGGAGCTA 60.683 45.833 0.00 0.00 0.00 3.32
5362 5871 6.017852 GGCTGTAAATAAGTGGAGCTACAATC 60.018 42.308 0.00 0.00 0.00 2.67
5383 5893 5.725110 TCATTTTCTCTATTGCTCGCTTC 57.275 39.130 0.00 0.00 0.00 3.86
5400 5910 2.512705 CTTCTCTTTGGCCTGCTCTTT 58.487 47.619 3.32 0.00 0.00 2.52
5406 5916 1.616159 TTGGCCTGCTCTTTACCAAC 58.384 50.000 3.32 0.00 35.53 3.77
5444 5954 1.535462 GTGTCGGTGTCCTTTTCCATG 59.465 52.381 0.00 0.00 0.00 3.66
5466 5976 9.170734 CCATGTCATATTCTTTTGAGAGAAAGA 57.829 33.333 0.00 0.00 42.28 2.52
5538 6055 6.607600 AGTCTAGTTGTCTATCCATTGCACTA 59.392 38.462 0.00 0.00 0.00 2.74
5553 6070 7.039082 TCCATTGCACTAGCTTTTATTTTCCTT 60.039 33.333 0.00 0.00 42.74 3.36
5622 6139 7.816945 AATAAGTGTTGCATTGTTCATTAGC 57.183 32.000 0.00 0.00 0.00 3.09
5623 6140 4.852134 AGTGTTGCATTGTTCATTAGCA 57.148 36.364 0.00 0.00 0.00 3.49
5624 6141 5.395682 AGTGTTGCATTGTTCATTAGCAT 57.604 34.783 0.00 0.00 34.87 3.79
5625 6142 5.404946 AGTGTTGCATTGTTCATTAGCATC 58.595 37.500 0.00 0.00 34.87 3.91
5641 6158 6.704289 TTAGCATCTGAATGAGGAATTTGG 57.296 37.500 0.00 0.00 34.61 3.28
5666 6183 2.550978 GTTCATCGACCCAGGTACATG 58.449 52.381 0.00 0.00 0.00 3.21
5667 6184 2.153034 TCATCGACCCAGGTACATGA 57.847 50.000 9.54 6.21 0.00 3.07
5668 6185 2.677914 TCATCGACCCAGGTACATGAT 58.322 47.619 9.54 0.00 0.00 2.45
5669 6186 3.038280 TCATCGACCCAGGTACATGATT 58.962 45.455 9.54 0.00 0.00 2.57
5670 6187 3.454447 TCATCGACCCAGGTACATGATTT 59.546 43.478 9.54 0.00 0.00 2.17
5671 6188 3.536956 TCGACCCAGGTACATGATTTC 57.463 47.619 9.54 1.29 0.00 2.17
5672 6189 2.835156 TCGACCCAGGTACATGATTTCA 59.165 45.455 9.54 0.00 0.00 2.69
5673 6190 3.118775 TCGACCCAGGTACATGATTTCAG 60.119 47.826 9.54 0.00 0.00 3.02
5674 6191 3.118775 CGACCCAGGTACATGATTTCAGA 60.119 47.826 9.54 0.00 0.00 3.27
5675 6192 4.622933 CGACCCAGGTACATGATTTCAGAA 60.623 45.833 9.54 0.00 0.00 3.02
5676 6193 5.253330 GACCCAGGTACATGATTTCAGAAA 58.747 41.667 9.54 0.00 0.00 2.52
5677 6194 5.256474 ACCCAGGTACATGATTTCAGAAAG 58.744 41.667 9.54 0.00 0.00 2.62
5678 6195 5.014123 ACCCAGGTACATGATTTCAGAAAGA 59.986 40.000 9.54 0.00 0.00 2.52
5679 6196 5.945784 CCCAGGTACATGATTTCAGAAAGAA 59.054 40.000 9.54 0.00 0.00 2.52
5705 6222 6.489603 AGATACTGATCTAGGTACCTCATGG 58.510 44.000 20.32 7.69 40.85 3.66
5706 6223 3.235200 ACTGATCTAGGTACCTCATGGC 58.765 50.000 20.32 6.23 36.63 4.40
5707 6224 2.564947 CTGATCTAGGTACCTCATGGCC 59.435 54.545 20.32 0.00 36.63 5.36
5708 6225 2.180086 TGATCTAGGTACCTCATGGCCT 59.820 50.000 20.32 0.00 36.63 5.19
5709 6226 2.383442 TCTAGGTACCTCATGGCCTC 57.617 55.000 20.32 0.00 36.63 4.70
5710 6227 1.573857 TCTAGGTACCTCATGGCCTCA 59.426 52.381 20.32 0.00 36.63 3.86
5711 6228 2.180086 TCTAGGTACCTCATGGCCTCAT 59.820 50.000 20.32 0.00 36.63 2.90
5721 6238 2.441532 GGCCTCATGTGCTGCCAT 60.442 61.111 9.38 0.00 43.46 4.40
5756 6273 5.235850 TGGGCAAAACTCATACTTCACTA 57.764 39.130 0.00 0.00 0.00 2.74
5768 6285 9.066892 ACTCATACTTCACTAAATCAAAAGCAA 57.933 29.630 0.00 0.00 0.00 3.91
5842 6360 5.014123 AGTCCCTTGTGAATTGTGATCCTAA 59.986 40.000 0.00 0.00 0.00 2.69
5844 6362 5.887598 TCCCTTGTGAATTGTGATCCTAATG 59.112 40.000 0.00 0.00 0.00 1.90
5845 6363 5.653769 CCCTTGTGAATTGTGATCCTAATGT 59.346 40.000 0.00 0.00 0.00 2.71
5846 6364 6.183360 CCCTTGTGAATTGTGATCCTAATGTC 60.183 42.308 0.00 0.00 0.00 3.06
5847 6365 6.375174 CCTTGTGAATTGTGATCCTAATGTCA 59.625 38.462 0.00 0.00 0.00 3.58
5848 6366 7.094248 CCTTGTGAATTGTGATCCTAATGTCAA 60.094 37.037 0.00 0.00 0.00 3.18
5849 6367 7.943079 TGTGAATTGTGATCCTAATGTCAAT 57.057 32.000 0.00 0.00 0.00 2.57
5850 6368 7.764331 TGTGAATTGTGATCCTAATGTCAATG 58.236 34.615 0.00 0.00 0.00 2.82
5851 6369 7.611079 TGTGAATTGTGATCCTAATGTCAATGA 59.389 33.333 0.00 0.00 0.00 2.57
5862 6380 7.203218 TCCTAATGTCAATGAGTCAATCTACG 58.797 38.462 0.00 0.00 0.00 3.51
5886 6404 7.923878 ACGTGGCATTTCTTTTGTTACTAAATT 59.076 29.630 0.00 0.00 0.00 1.82
5964 6492 3.316308 GCCGCATCAGATTATTTGGAACT 59.684 43.478 0.00 0.00 0.00 3.01
5997 6526 0.962356 AGTGCTGGCAGGCATTACAC 60.962 55.000 17.64 13.93 44.34 2.90
6007 6536 3.556843 GCAGGCATTACACCCATTTGTTT 60.557 43.478 0.00 0.00 0.00 2.83
6039 6579 5.894298 ATCTGAACACCTATGGCAAGATA 57.106 39.130 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.756933 AACATCAGCAAAAATGCCTGT 57.243 38.095 0.00 0.00 34.90 4.00
1 2 4.753107 AGAAAACATCAGCAAAAATGCCTG 59.247 37.500 0.00 0.00 34.90 4.85
2 3 4.964593 AGAAAACATCAGCAAAAATGCCT 58.035 34.783 0.00 0.00 34.90 4.75
3 4 6.783892 TTAGAAAACATCAGCAAAAATGCC 57.216 33.333 0.00 0.00 34.90 4.40
32 33 9.399797 TGCTGAGAATTGTTGAGTATATTGATT 57.600 29.630 0.00 0.00 0.00 2.57
33 34 8.969260 TGCTGAGAATTGTTGAGTATATTGAT 57.031 30.769 0.00 0.00 0.00 2.57
34 35 8.668353 GTTGCTGAGAATTGTTGAGTATATTGA 58.332 33.333 0.00 0.00 0.00 2.57
35 36 7.912250 GGTTGCTGAGAATTGTTGAGTATATTG 59.088 37.037 0.00 0.00 0.00 1.90
36 37 7.831193 AGGTTGCTGAGAATTGTTGAGTATATT 59.169 33.333 0.00 0.00 0.00 1.28
37 38 7.341805 AGGTTGCTGAGAATTGTTGAGTATAT 58.658 34.615 0.00 0.00 0.00 0.86
38 39 6.711277 AGGTTGCTGAGAATTGTTGAGTATA 58.289 36.000 0.00 0.00 0.00 1.47
39 40 5.564550 AGGTTGCTGAGAATTGTTGAGTAT 58.435 37.500 0.00 0.00 0.00 2.12
40 41 4.973168 AGGTTGCTGAGAATTGTTGAGTA 58.027 39.130 0.00 0.00 0.00 2.59
41 42 3.817647 GAGGTTGCTGAGAATTGTTGAGT 59.182 43.478 0.00 0.00 0.00 3.41
42 43 4.070716 AGAGGTTGCTGAGAATTGTTGAG 58.929 43.478 0.00 0.00 0.00 3.02
43 44 4.067896 GAGAGGTTGCTGAGAATTGTTGA 58.932 43.478 0.00 0.00 0.00 3.18
44 45 4.070716 AGAGAGGTTGCTGAGAATTGTTG 58.929 43.478 0.00 0.00 0.00 3.33
45 46 4.070716 CAGAGAGGTTGCTGAGAATTGTT 58.929 43.478 0.00 0.00 34.06 2.83
46 47 3.672808 CAGAGAGGTTGCTGAGAATTGT 58.327 45.455 0.00 0.00 34.06 2.71
47 48 2.419324 GCAGAGAGGTTGCTGAGAATTG 59.581 50.000 0.00 0.00 38.51 2.32
48 49 2.617532 GGCAGAGAGGTTGCTGAGAATT 60.618 50.000 0.00 0.00 41.27 2.17
49 50 1.065564 GGCAGAGAGGTTGCTGAGAAT 60.066 52.381 0.00 0.00 41.27 2.40
50 51 0.322975 GGCAGAGAGGTTGCTGAGAA 59.677 55.000 0.00 0.00 41.27 2.87
51 52 0.833409 TGGCAGAGAGGTTGCTGAGA 60.833 55.000 0.00 0.00 41.27 3.27
52 53 0.391395 CTGGCAGAGAGGTTGCTGAG 60.391 60.000 9.42 0.00 41.27 3.35
53 54 1.675801 CTGGCAGAGAGGTTGCTGA 59.324 57.895 9.42 0.00 41.27 4.26
54 55 2.039405 GCTGGCAGAGAGGTTGCTG 61.039 63.158 20.86 0.00 41.27 4.41
55 56 0.906756 TAGCTGGCAGAGAGGTTGCT 60.907 55.000 20.86 8.85 41.27 3.91
56 57 0.461693 CTAGCTGGCAGAGAGGTTGC 60.462 60.000 20.86 0.00 40.80 4.17
57 58 0.901124 ACTAGCTGGCAGAGAGGTTG 59.099 55.000 20.86 0.87 0.00 3.77
58 59 0.901124 CACTAGCTGGCAGAGAGGTT 59.099 55.000 20.86 0.00 0.00 3.50
59 60 1.612395 GCACTAGCTGGCAGAGAGGT 61.612 60.000 20.86 7.81 37.91 3.85
60 61 1.143620 GCACTAGCTGGCAGAGAGG 59.856 63.158 20.86 7.15 37.91 3.69
61 62 1.143620 GGCACTAGCTGGCAGAGAG 59.856 63.158 20.86 16.10 45.09 3.20
62 63 3.303189 GGCACTAGCTGGCAGAGA 58.697 61.111 20.86 3.37 45.09 3.10
67 68 1.208293 AGTAAGAAGGCACTAGCTGGC 59.792 52.381 0.00 9.77 46.14 4.85
68 69 4.314740 CTAGTAAGAAGGCACTAGCTGG 57.685 50.000 0.00 0.00 38.49 4.85
72 73 2.034812 CGGGCTAGTAAGAAGGCACTAG 59.965 54.545 4.95 4.95 44.66 2.57
73 74 2.029623 CGGGCTAGTAAGAAGGCACTA 58.970 52.381 0.00 0.00 38.49 2.74
75 76 0.822164 TCGGGCTAGTAAGAAGGCAC 59.178 55.000 0.00 0.00 41.11 5.01
76 77 1.789523 ATCGGGCTAGTAAGAAGGCA 58.210 50.000 0.00 0.00 41.11 4.75
77 78 2.626743 TGTATCGGGCTAGTAAGAAGGC 59.373 50.000 0.00 0.00 38.73 4.35
78 79 3.256136 CCTGTATCGGGCTAGTAAGAAGG 59.744 52.174 0.00 0.00 0.00 3.46
79 80 3.890147 ACCTGTATCGGGCTAGTAAGAAG 59.110 47.826 0.00 0.00 32.02 2.85
80 81 3.635373 CACCTGTATCGGGCTAGTAAGAA 59.365 47.826 0.00 0.00 32.02 2.52
81 82 3.220110 CACCTGTATCGGGCTAGTAAGA 58.780 50.000 0.00 0.00 32.02 2.10
82 83 2.957006 ACACCTGTATCGGGCTAGTAAG 59.043 50.000 0.00 0.00 32.02 2.34
83 84 3.022557 ACACCTGTATCGGGCTAGTAA 57.977 47.619 0.00 0.00 32.02 2.24
84 85 2.691526 CAACACCTGTATCGGGCTAGTA 59.308 50.000 0.00 0.00 32.02 1.82
85 86 1.480954 CAACACCTGTATCGGGCTAGT 59.519 52.381 0.00 0.00 32.02 2.57
86 87 1.754803 TCAACACCTGTATCGGGCTAG 59.245 52.381 0.00 0.00 32.02 3.42
87 88 1.754803 CTCAACACCTGTATCGGGCTA 59.245 52.381 0.00 0.00 32.02 3.93
88 89 0.537188 CTCAACACCTGTATCGGGCT 59.463 55.000 0.00 0.00 32.02 5.19
89 90 0.535335 TCTCAACACCTGTATCGGGC 59.465 55.000 0.00 0.00 32.02 6.13
90 91 2.099921 CTCTCTCAACACCTGTATCGGG 59.900 54.545 0.00 0.00 35.68 5.14
91 92 2.480416 GCTCTCTCAACACCTGTATCGG 60.480 54.545 0.00 0.00 0.00 4.18
92 93 2.480416 GGCTCTCTCAACACCTGTATCG 60.480 54.545 0.00 0.00 0.00 2.92
93 94 2.159028 GGGCTCTCTCAACACCTGTATC 60.159 54.545 0.00 0.00 0.00 2.24
94 95 1.834263 GGGCTCTCTCAACACCTGTAT 59.166 52.381 0.00 0.00 0.00 2.29
95 96 1.267121 GGGCTCTCTCAACACCTGTA 58.733 55.000 0.00 0.00 0.00 2.74
96 97 1.484444 GGGGCTCTCTCAACACCTGT 61.484 60.000 0.00 0.00 0.00 4.00
97 98 1.298014 GGGGCTCTCTCAACACCTG 59.702 63.158 0.00 0.00 0.00 4.00
98 99 0.768221 TTGGGGCTCTCTCAACACCT 60.768 55.000 0.00 0.00 0.00 4.00
99 100 0.110486 TTTGGGGCTCTCTCAACACC 59.890 55.000 0.00 0.00 0.00 4.16
100 101 2.087646 GATTTGGGGCTCTCTCAACAC 58.912 52.381 0.00 0.00 0.00 3.32
101 102 1.004745 GGATTTGGGGCTCTCTCAACA 59.995 52.381 0.00 0.00 0.00 3.33
102 103 1.683319 GGGATTTGGGGCTCTCTCAAC 60.683 57.143 0.00 0.00 0.00 3.18
103 104 0.625849 GGGATTTGGGGCTCTCTCAA 59.374 55.000 0.00 0.00 0.00 3.02
104 105 0.549902 TGGGATTTGGGGCTCTCTCA 60.550 55.000 0.00 0.00 0.00 3.27
105 106 0.106967 GTGGGATTTGGGGCTCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
106 107 0.846427 TGTGGGATTTGGGGCTCTCT 60.846 55.000 0.00 0.00 0.00 3.10
107 108 0.259938 ATGTGGGATTTGGGGCTCTC 59.740 55.000 0.00 0.00 0.00 3.20
108 109 0.259938 GATGTGGGATTTGGGGCTCT 59.740 55.000 0.00 0.00 0.00 4.09
109 110 0.756815 GGATGTGGGATTTGGGGCTC 60.757 60.000 0.00 0.00 0.00 4.70
110 111 1.311059 GGATGTGGGATTTGGGGCT 59.689 57.895 0.00 0.00 0.00 5.19
111 112 1.762063 GGGATGTGGGATTTGGGGC 60.762 63.158 0.00 0.00 0.00 5.80
112 113 0.265553 ATGGGATGTGGGATTTGGGG 59.734 55.000 0.00 0.00 0.00 4.96
113 114 1.708341 GATGGGATGTGGGATTTGGG 58.292 55.000 0.00 0.00 0.00 4.12
114 115 1.321474 CGATGGGATGTGGGATTTGG 58.679 55.000 0.00 0.00 0.00 3.28
115 116 0.670162 GCGATGGGATGTGGGATTTG 59.330 55.000 0.00 0.00 0.00 2.32
116 117 0.819259 CGCGATGGGATGTGGGATTT 60.819 55.000 0.00 0.00 0.00 2.17
117 118 1.227943 CGCGATGGGATGTGGGATT 60.228 57.895 0.00 0.00 0.00 3.01
118 119 2.427320 CGCGATGGGATGTGGGAT 59.573 61.111 0.00 0.00 0.00 3.85
119 120 3.080765 ACGCGATGGGATGTGGGA 61.081 61.111 15.93 0.00 0.00 4.37
120 121 2.896854 CACGCGATGGGATGTGGG 60.897 66.667 15.93 0.00 0.00 4.61
121 122 1.745115 AACACGCGATGGGATGTGG 60.745 57.895 15.93 0.00 36.67 4.17
122 123 1.425031 CAACACGCGATGGGATGTG 59.575 57.895 15.93 0.00 38.28 3.21
123 124 2.398554 GCAACACGCGATGGGATGT 61.399 57.895 15.93 1.51 0.00 3.06
124 125 2.404789 GCAACACGCGATGGGATG 59.595 61.111 15.93 0.68 0.00 3.51
133 134 0.380378 TGTTTTCTCCAGCAACACGC 59.620 50.000 0.00 0.00 42.91 5.34
134 135 2.290367 TGATGTTTTCTCCAGCAACACG 59.710 45.455 0.00 0.00 33.33 4.49
135 136 3.565482 TCTGATGTTTTCTCCAGCAACAC 59.435 43.478 0.00 0.00 33.33 3.32
136 137 3.819368 TCTGATGTTTTCTCCAGCAACA 58.181 40.909 0.00 0.00 34.97 3.33
137 138 4.276926 ACTTCTGATGTTTTCTCCAGCAAC 59.723 41.667 0.00 0.00 0.00 4.17
138 139 4.464008 ACTTCTGATGTTTTCTCCAGCAA 58.536 39.130 0.00 0.00 0.00 3.91
139 140 4.090761 ACTTCTGATGTTTTCTCCAGCA 57.909 40.909 0.00 0.00 0.00 4.41
140 141 4.633565 CCTACTTCTGATGTTTTCTCCAGC 59.366 45.833 1.28 0.00 0.00 4.85
141 142 4.633565 GCCTACTTCTGATGTTTTCTCCAG 59.366 45.833 1.28 0.00 0.00 3.86
142 143 4.287067 AGCCTACTTCTGATGTTTTCTCCA 59.713 41.667 1.28 0.00 0.00 3.86
143 144 4.633565 CAGCCTACTTCTGATGTTTTCTCC 59.366 45.833 1.28 0.00 33.54 3.71
144 145 5.482908 TCAGCCTACTTCTGATGTTTTCTC 58.517 41.667 1.28 0.00 35.81 2.87
145 146 5.247110 TCTCAGCCTACTTCTGATGTTTTCT 59.753 40.000 1.28 0.00 39.56 2.52
146 147 5.482908 TCTCAGCCTACTTCTGATGTTTTC 58.517 41.667 1.28 0.00 39.56 2.29
147 148 5.489792 TCTCAGCCTACTTCTGATGTTTT 57.510 39.130 1.28 0.00 39.56 2.43
148 149 5.489792 TTCTCAGCCTACTTCTGATGTTT 57.510 39.130 1.28 0.00 39.56 2.83
149 150 5.424895 AGATTCTCAGCCTACTTCTGATGTT 59.575 40.000 1.28 0.00 39.56 2.71
150 151 4.961730 AGATTCTCAGCCTACTTCTGATGT 59.038 41.667 1.65 1.65 39.56 3.06
151 152 5.068855 TGAGATTCTCAGCCTACTTCTGATG 59.931 44.000 12.38 0.00 39.56 3.07
152 153 5.207354 TGAGATTCTCAGCCTACTTCTGAT 58.793 41.667 12.38 0.00 39.56 2.90
153 154 4.604156 TGAGATTCTCAGCCTACTTCTGA 58.396 43.478 12.38 0.00 35.39 3.27
154 155 4.998671 TGAGATTCTCAGCCTACTTCTG 57.001 45.455 12.38 0.00 35.39 3.02
155 156 4.278170 CGATGAGATTCTCAGCCTACTTCT 59.722 45.833 22.55 3.69 43.02 2.85
156 157 4.545610 CGATGAGATTCTCAGCCTACTTC 58.454 47.826 22.55 12.17 43.02 3.01
157 158 3.243704 GCGATGAGATTCTCAGCCTACTT 60.244 47.826 22.55 5.05 43.02 2.24
158 159 2.295909 GCGATGAGATTCTCAGCCTACT 59.704 50.000 22.55 5.73 43.02 2.57
159 160 2.609244 GGCGATGAGATTCTCAGCCTAC 60.609 54.545 27.54 17.44 43.80 3.18
160 161 1.615883 GGCGATGAGATTCTCAGCCTA 59.384 52.381 27.54 6.44 43.80 3.93
161 162 0.392336 GGCGATGAGATTCTCAGCCT 59.608 55.000 27.54 12.27 43.80 4.58
162 163 0.392336 AGGCGATGAGATTCTCAGCC 59.608 55.000 27.55 27.55 45.96 4.85
163 164 1.500108 CAGGCGATGAGATTCTCAGC 58.500 55.000 19.58 19.58 44.08 4.26
164 165 1.202498 TGCAGGCGATGAGATTCTCAG 60.202 52.381 20.35 9.96 44.08 3.35
165 166 0.826062 TGCAGGCGATGAGATTCTCA 59.174 50.000 18.29 18.29 44.99 3.27
166 167 2.166821 ATGCAGGCGATGAGATTCTC 57.833 50.000 6.73 6.73 0.00 2.87
167 168 3.597255 CATATGCAGGCGATGAGATTCT 58.403 45.455 0.00 0.00 0.00 2.40
168 169 2.676839 CCATATGCAGGCGATGAGATTC 59.323 50.000 0.00 0.00 0.00 2.52
169 170 2.617276 CCCATATGCAGGCGATGAGATT 60.617 50.000 0.00 0.00 0.00 2.40
170 171 1.065636 CCCATATGCAGGCGATGAGAT 60.066 52.381 0.00 0.00 0.00 2.75
171 172 0.322648 CCCATATGCAGGCGATGAGA 59.677 55.000 0.00 0.00 0.00 3.27
172 173 1.303799 GCCCATATGCAGGCGATGAG 61.304 60.000 7.17 0.00 39.87 2.90
173 174 1.302752 GCCCATATGCAGGCGATGA 60.303 57.895 7.17 0.00 39.87 2.92
174 175 3.271014 GCCCATATGCAGGCGATG 58.729 61.111 7.17 0.00 39.87 3.84
178 179 3.667282 CAGCGCCCATATGCAGGC 61.667 66.667 2.29 11.79 46.17 4.85
179 180 3.667282 GCAGCGCCCATATGCAGG 61.667 66.667 13.08 0.00 39.75 4.85
180 181 3.667282 GGCAGCGCCCATATGCAG 61.667 66.667 18.65 0.00 44.06 4.41
191 192 3.357079 GAAGGTGGTGTGGCAGCG 61.357 66.667 0.00 0.00 34.27 5.18
192 193 1.391157 TTTGAAGGTGGTGTGGCAGC 61.391 55.000 0.00 0.00 0.00 5.25
207 208 2.232696 TCTTCCGACGACATGGATTTGA 59.767 45.455 0.00 0.00 33.42 2.69
219 220 2.893398 CCCCTCCTTCTTCCGACG 59.107 66.667 0.00 0.00 0.00 5.12
225 226 1.846124 TCAACCGCCCCTCCTTCTT 60.846 57.895 0.00 0.00 0.00 2.52
257 258 6.651643 TGCAGATTTGGAAAATTTTGATCTGG 59.348 34.615 25.39 16.37 39.39 3.86
268 269 2.468831 GCGTTGTGCAGATTTGGAAAA 58.531 42.857 0.00 0.00 45.45 2.29
269 270 2.132740 GCGTTGTGCAGATTTGGAAA 57.867 45.000 0.00 0.00 45.45 3.13
270 271 3.863681 GCGTTGTGCAGATTTGGAA 57.136 47.368 0.00 0.00 45.45 3.53
280 281 2.160417 AGCAATCTCTTAAGCGTTGTGC 59.840 45.455 0.00 4.00 46.98 4.57
288 289 5.556355 TGCAATGACAGCAATCTCTTAAG 57.444 39.130 0.00 0.00 39.39 1.85
289 290 5.963176 TTGCAATGACAGCAATCTCTTAA 57.037 34.783 0.00 0.00 46.13 1.85
300 301 1.136147 GAGGCGCTTGCAATGACAG 59.864 57.895 7.64 0.00 41.71 3.51
318 319 2.200067 GGATCAAGCTGTCTCATGACG 58.800 52.381 0.00 0.00 45.70 4.35
322 323 1.472904 CGCTGGATCAAGCTGTCTCAT 60.473 52.381 19.90 0.00 41.24 2.90
328 329 1.355563 CATGCGCTGGATCAAGCTG 59.644 57.895 19.90 13.85 41.24 4.24
331 332 2.719979 GGCATGCGCTGGATCAAG 59.280 61.111 12.44 0.00 38.60 3.02
339 340 3.585990 GGCAATACGGCATGCGCT 61.586 61.111 12.44 0.81 43.47 5.92
347 348 3.374012 TTCCCCGACGGCAATACGG 62.374 63.158 8.86 3.00 45.24 4.02
351 352 2.584608 CTCTTCCCCGACGGCAAT 59.415 61.111 8.86 0.00 0.00 3.56
356 357 3.001406 AACCCCTCTTCCCCGACG 61.001 66.667 0.00 0.00 0.00 5.12
357 358 1.900545 CTCAACCCCTCTTCCCCGAC 61.901 65.000 0.00 0.00 0.00 4.79
358 359 1.612442 CTCAACCCCTCTTCCCCGA 60.612 63.158 0.00 0.00 0.00 5.14
359 360 1.612442 TCTCAACCCCTCTTCCCCG 60.612 63.158 0.00 0.00 0.00 5.73
363 364 4.013050 CCATTTTCTCTCAACCCCTCTTC 58.987 47.826 0.00 0.00 0.00 2.87
365 366 2.310052 CCCATTTTCTCTCAACCCCTCT 59.690 50.000 0.00 0.00 0.00 3.69
366 367 2.728007 CCCATTTTCTCTCAACCCCTC 58.272 52.381 0.00 0.00 0.00 4.30
367 368 1.272704 GCCCATTTTCTCTCAACCCCT 60.273 52.381 0.00 0.00 0.00 4.79
379 384 1.917787 ACATTGCCCGGCCCATTTT 60.918 52.632 7.03 0.00 0.00 1.82
389 394 1.070601 AGGCTTTTGAACACATTGCCC 59.929 47.619 0.00 0.00 39.68 5.36
396 401 9.827411 CTTCTTTAGTTATAGGCTTTTGAACAC 57.173 33.333 0.00 0.00 0.00 3.32
398 403 8.459635 CCCTTCTTTAGTTATAGGCTTTTGAAC 58.540 37.037 0.00 0.00 0.00 3.18
401 406 7.939784 ACCCTTCTTTAGTTATAGGCTTTTG 57.060 36.000 0.00 0.00 0.00 2.44
402 407 7.396339 CCAACCCTTCTTTAGTTATAGGCTTTT 59.604 37.037 0.00 0.00 0.00 2.27
407 412 6.542735 GCTTCCAACCCTTCTTTAGTTATAGG 59.457 42.308 0.00 0.00 0.00 2.57
408 413 6.542735 GGCTTCCAACCCTTCTTTAGTTATAG 59.457 42.308 0.00 0.00 0.00 1.31
411 416 4.105057 TGGCTTCCAACCCTTCTTTAGTTA 59.895 41.667 0.00 0.00 0.00 2.24
416 421 2.158325 TCATGGCTTCCAACCCTTCTTT 60.158 45.455 0.00 0.00 36.95 2.52
419 424 1.004745 TCTCATGGCTTCCAACCCTTC 59.995 52.381 0.00 0.00 36.95 3.46
427 432 0.842635 ATCCCAGTCTCATGGCTTCC 59.157 55.000 0.00 0.00 39.17 3.46
428 433 1.767681 AGATCCCAGTCTCATGGCTTC 59.232 52.381 0.00 0.00 39.17 3.86
429 434 1.767681 GAGATCCCAGTCTCATGGCTT 59.232 52.381 0.00 0.00 43.27 4.35
431 436 1.422531 AGAGATCCCAGTCTCATGGC 58.577 55.000 6.67 0.00 45.62 4.40
432 437 3.577848 CCTAAGAGATCCCAGTCTCATGG 59.422 52.174 6.67 2.28 45.62 3.66
440 445 4.020396 CCACATGATCCTAAGAGATCCCAG 60.020 50.000 0.00 0.00 41.73 4.45
441 446 3.906218 CCACATGATCCTAAGAGATCCCA 59.094 47.826 0.00 0.00 41.73 4.37
442 447 3.906846 ACCACATGATCCTAAGAGATCCC 59.093 47.826 0.00 0.00 41.73 3.85
443 448 6.438741 TGATACCACATGATCCTAAGAGATCC 59.561 42.308 0.00 0.00 41.73 3.36
444 449 7.473735 TGATACCACATGATCCTAAGAGATC 57.526 40.000 0.00 0.00 42.57 2.75
445 450 7.862274 TTGATACCACATGATCCTAAGAGAT 57.138 36.000 0.00 0.00 0.00 2.75
446 451 7.675161 TTTGATACCACATGATCCTAAGAGA 57.325 36.000 0.00 0.00 0.00 3.10
447 452 6.426328 GCTTTGATACCACATGATCCTAAGAG 59.574 42.308 0.00 0.00 0.00 2.85
448 453 6.291377 GCTTTGATACCACATGATCCTAAGA 58.709 40.000 0.00 0.00 0.00 2.10
449 454 5.471456 GGCTTTGATACCACATGATCCTAAG 59.529 44.000 0.00 0.49 0.00 2.18
450 455 5.376625 GGCTTTGATACCACATGATCCTAA 58.623 41.667 0.00 0.00 0.00 2.69
451 456 4.202461 GGGCTTTGATACCACATGATCCTA 60.202 45.833 0.00 0.00 0.00 2.94
452 457 3.435601 GGGCTTTGATACCACATGATCCT 60.436 47.826 0.00 0.00 0.00 3.24
469 474 1.816961 GCGATGATCCATGAAGGGCTT 60.817 52.381 0.00 0.00 38.24 4.35
472 477 1.810755 CATGCGATGATCCATGAAGGG 59.189 52.381 14.71 0.00 40.92 3.95
479 484 2.614983 CAATGTGACATGCGATGATCCA 59.385 45.455 0.00 0.00 0.00 3.41
480 485 2.615447 ACAATGTGACATGCGATGATCC 59.385 45.455 0.00 0.00 0.00 3.36
505 510 2.626266 TCGACTTGCTTTCCTCTGTACA 59.374 45.455 0.00 0.00 0.00 2.90
510 515 2.569404 AGGATTCGACTTGCTTTCCTCT 59.431 45.455 0.00 0.00 0.00 3.69
517 522 4.487714 TTTATGGAGGATTCGACTTGCT 57.512 40.909 0.00 0.00 0.00 3.91
523 528 5.784578 TCGATCTTTTATGGAGGATTCGA 57.215 39.130 0.00 0.00 0.00 3.71
539 544 9.442047 AAAAGATTGTTCAACTCTTATCGATCT 57.558 29.630 0.00 0.00 0.00 2.75
581 587 5.967088 ACTCGCAACTAACACATAGAATCT 58.033 37.500 0.00 0.00 35.47 2.40
582 588 5.805486 TGACTCGCAACTAACACATAGAATC 59.195 40.000 0.00 0.00 35.47 2.52
589 654 1.270094 CCCTGACTCGCAACTAACACA 60.270 52.381 0.00 0.00 0.00 3.72
600 665 3.057526 GGGTTTTCAAAATCCCTGACTCG 60.058 47.826 0.00 0.00 42.28 4.18
609 674 5.928264 CAGAATCAGTGGGGTTTTCAAAATC 59.072 40.000 0.00 0.00 0.00 2.17
615 680 3.888930 TGAACAGAATCAGTGGGGTTTTC 59.111 43.478 0.00 0.00 0.00 2.29
619 684 5.192522 AGAATATGAACAGAATCAGTGGGGT 59.807 40.000 0.00 0.00 31.76 4.95
620 685 5.530171 CAGAATATGAACAGAATCAGTGGGG 59.470 44.000 0.00 0.00 31.76 4.96
622 687 5.587443 TGCAGAATATGAACAGAATCAGTGG 59.413 40.000 0.00 0.00 31.76 4.00
631 696 9.361315 TCATCAATTTTTGCAGAATATGAACAG 57.639 29.630 8.61 4.23 0.00 3.16
639 704 9.582431 CTAGAACATCATCAATTTTTGCAGAAT 57.418 29.630 0.00 0.00 0.00 2.40
642 707 8.456471 TCTCTAGAACATCATCAATTTTTGCAG 58.544 33.333 0.00 0.00 0.00 4.41
662 728 4.272018 GTGGCAAATGCACTACATCTCTAG 59.728 45.833 7.80 0.00 44.36 2.43
670 736 1.578926 TGCGTGGCAAATGCACTAC 59.421 52.632 7.80 2.63 46.04 2.73
686 753 3.553508 CCCTATGGCATATGCTTTTGTGC 60.554 47.826 26.12 9.08 41.70 4.57
790 875 2.747855 GCTGACAGGGGGAAAGCG 60.748 66.667 4.26 0.00 0.00 4.68
791 876 1.377856 GAGCTGACAGGGGGAAAGC 60.378 63.158 4.26 0.00 0.00 3.51
792 877 1.301293 GGAGCTGACAGGGGGAAAG 59.699 63.158 4.26 0.00 0.00 2.62
793 878 2.231380 GGGAGCTGACAGGGGGAAA 61.231 63.158 4.26 0.00 0.00 3.13
870 955 4.924187 ATCGAGGAGGGCGGAGGG 62.924 72.222 0.00 0.00 0.00 4.30
871 956 3.299190 GATCGAGGAGGGCGGAGG 61.299 72.222 0.00 0.00 0.00 4.30
872 957 3.299190 GGATCGAGGAGGGCGGAG 61.299 72.222 0.00 0.00 0.00 4.63
875 960 2.088674 AATTCGGATCGAGGAGGGCG 62.089 60.000 0.00 0.00 37.14 6.13
1226 1347 0.525761 GCCATAAAACAGAAGCGGCA 59.474 50.000 1.45 0.00 37.98 5.69
1227 1348 0.523335 CGCCATAAAACAGAAGCGGC 60.523 55.000 0.00 0.00 39.89 6.53
1235 1358 1.579084 GACACGGGCGCCATAAAACA 61.579 55.000 30.85 0.00 0.00 2.83
1240 1363 4.501714 GACGACACGGGCGCCATA 62.502 66.667 30.85 0.00 0.00 2.74
1267 1391 2.859165 TCAAAGCAGGAGATTCGGTT 57.141 45.000 0.00 0.00 0.00 4.44
1277 1401 4.228097 CGCGCCGATCAAAGCAGG 62.228 66.667 0.00 0.00 0.00 4.85
1300 1424 7.729116 TGCCTGAATTTTGATCTTCTTTTTCT 58.271 30.769 0.00 0.00 0.00 2.52
1301 1425 7.951530 TGCCTGAATTTTGATCTTCTTTTTC 57.048 32.000 0.00 0.00 0.00 2.29
1327 1453 4.778143 CCCAGAAAGACCGGGGCG 62.778 72.222 6.32 0.00 36.21 6.13
1329 1455 0.394352 CATTCCCAGAAAGACCGGGG 60.394 60.000 6.32 0.00 40.68 5.73
1351 1478 5.615289 ACAGGATAGCAATAGTCCATTGAC 58.385 41.667 1.26 0.00 45.99 3.18
1352 1479 5.604231 AGACAGGATAGCAATAGTCCATTGA 59.396 40.000 1.26 0.00 45.99 2.57
1353 1480 5.862845 AGACAGGATAGCAATAGTCCATTG 58.137 41.667 0.00 0.00 45.87 2.82
1356 1483 4.546674 TGAGACAGGATAGCAATAGTCCA 58.453 43.478 0.00 0.00 34.42 4.02
1359 1486 4.959210 ACACTGAGACAGGATAGCAATAGT 59.041 41.667 0.00 0.00 35.51 2.12
1374 1501 2.037121 TGAGCCGAATCAAACACTGAGA 59.963 45.455 0.00 0.00 37.52 3.27
1403 1530 1.134818 AGCATCATGACGGCGAGTTAA 60.135 47.619 16.62 0.00 0.00 2.01
1404 1531 0.459899 AGCATCATGACGGCGAGTTA 59.540 50.000 16.62 0.00 0.00 2.24
1406 1533 1.520120 CAGCATCATGACGGCGAGT 60.520 57.895 16.62 0.00 0.00 4.18
1480 1607 6.974932 TGAATGCTCAGAGAAATGTAACTC 57.025 37.500 0.00 0.00 0.00 3.01
1497 1624 6.476706 GCAACAATAACTAGGGAAATGAATGC 59.523 38.462 0.00 0.86 0.00 3.56
1507 1634 6.530019 AATTCCTTGCAACAATAACTAGGG 57.470 37.500 0.00 0.00 0.00 3.53
1521 1648 7.713764 AACAACTGATTTACAAATTCCTTGC 57.286 32.000 0.00 0.00 38.75 4.01
1556 1683 2.162408 GCTAACAGACTTGCACATTCCC 59.838 50.000 0.00 0.00 0.00 3.97
1557 1684 3.077359 AGCTAACAGACTTGCACATTCC 58.923 45.455 0.00 0.00 0.00 3.01
1558 1685 4.667668 CGAAGCTAACAGACTTGCACATTC 60.668 45.833 0.00 0.00 0.00 2.67
1562 1690 2.404215 TCGAAGCTAACAGACTTGCAC 58.596 47.619 0.00 0.00 0.00 4.57
1588 1716 1.228245 GTTGCAGGCCAGGAGTCAA 60.228 57.895 5.01 0.00 0.00 3.18
1606 1734 6.015504 GCGTATCTACAACAACAAACATCAG 58.984 40.000 0.00 0.00 0.00 2.90
1609 1737 7.661127 TTAGCGTATCTACAACAACAAACAT 57.339 32.000 0.00 0.00 0.00 2.71
1612 1740 7.535940 GCAAATTAGCGTATCTACAACAACAAA 59.464 33.333 0.00 0.00 0.00 2.83
1676 2026 1.405821 AGATTAGGAGCACCGTCTTCG 59.594 52.381 0.00 0.00 41.83 3.79
1709 2059 0.758734 CTGGGTTCTGTGACAGTGGA 59.241 55.000 12.93 0.00 32.61 4.02
1715 2065 4.800554 CCACCTGGGTTCTGTGAC 57.199 61.111 0.00 0.00 31.66 3.67
1774 2125 8.887717 CCTAAATCTACAAGAATTTCAGTGGAG 58.112 37.037 11.56 9.05 0.00 3.86
1781 2132 9.989869 GTAACAGCCTAAATCTACAAGAATTTC 57.010 33.333 0.00 0.00 0.00 2.17
1788 2139 7.847096 TCTGATGTAACAGCCTAAATCTACAA 58.153 34.615 0.00 0.00 37.75 2.41
1887 2239 5.431765 AGTCATCTAGCACCAACCATTTAG 58.568 41.667 0.00 0.00 0.00 1.85
2112 2464 5.462405 AGAACGCGTGAAGGATATATCTTC 58.538 41.667 14.98 13.15 40.57 2.87
2123 2475 0.792640 AATGCAGAGAACGCGTGAAG 59.207 50.000 14.98 2.44 0.00 3.02
2161 2513 3.840468 TGATGCAATGCAACTGAATGTC 58.160 40.909 13.45 2.89 43.62 3.06
2394 2746 5.287035 CACCGACGACTTACCTTGTTTATAC 59.713 44.000 0.00 0.00 0.00 1.47
2412 2764 2.135664 ATAGCTGAATACGCACCGAC 57.864 50.000 0.00 0.00 0.00 4.79
2499 2852 4.156739 CCTGTGAAACCAATTCTCTTAGGC 59.843 45.833 0.00 0.00 38.92 3.93
2602 2955 3.683365 TTTACTCCCTCCGTACCAAAC 57.317 47.619 0.00 0.00 0.00 2.93
2656 3010 8.691661 ATATCTAAGAAACAGTTTGTGGTTGT 57.308 30.769 2.34 0.00 35.62 3.32
2714 3068 7.147567 TGCTTATGTCATGGAATCTACCAGTAA 60.148 37.037 0.00 0.00 43.49 2.24
2768 3122 8.177663 CCTATATGGCAAAAATAATGCTACTCG 58.822 37.037 0.00 0.00 43.34 4.18
2769 3123 9.014297 ACCTATATGGCAAAAATAATGCTACTC 57.986 33.333 0.00 0.00 43.34 2.59
2881 3302 6.064717 GCAATTAGGAGGTAACATGAGGAAT 58.935 40.000 0.00 0.00 41.41 3.01
2979 3400 4.469657 AGGACATAGAACAGAGGAGCTAG 58.530 47.826 0.00 0.00 0.00 3.42
3134 3555 4.946784 ACTTCTAATTTTAGCTGCACCG 57.053 40.909 1.02 0.00 0.00 4.94
3830 4251 3.009473 TCAAGGGAGATTTTCCTGTCAGG 59.991 47.826 13.21 13.21 45.98 3.86
3969 4390 7.012894 TGTTCTAGAAACATTTGATTCGGTGTT 59.987 33.333 6.78 0.00 36.43 3.32
4320 4741 0.744771 GGTTCTTCCTCATGACGGGC 60.745 60.000 10.23 0.00 0.00 6.13
4343 4764 2.203552 TTGGCGCCATGGGAAACA 60.204 55.556 33.25 10.05 0.00 2.83
4422 4843 3.873952 GCTTCATCAGTCTTACCATCACC 59.126 47.826 0.00 0.00 0.00 4.02
4459 4880 7.026631 TGATAATCCACCGATTCAAATGTTC 57.973 36.000 0.00 0.00 39.49 3.18
4663 5084 6.198029 CGAAAATAACAGTGATGTGTTGCAAA 59.802 34.615 0.00 0.00 40.89 3.68
4735 5156 5.705441 CACCAACATGAAGTAGGAGCTTTAA 59.295 40.000 0.00 0.00 0.00 1.52
4897 5402 7.658167 CAGAGTGATATTCATGATCTGAGCTTT 59.342 37.037 12.80 0.00 36.91 3.51
4996 5504 4.984194 GCACTGATGCCATGGGTA 57.016 55.556 15.13 0.00 46.97 3.69
5166 5674 8.360390 GGAGGTCTTGTCAAATGAAAGTTAAAT 58.640 33.333 0.00 0.00 0.00 1.40
5311 5820 5.517770 GCCAAGATTTGATCAAATGTACAGC 59.482 40.000 32.89 25.92 40.77 4.40
5357 5866 5.587844 AGCGAGCAATAGAGAAAATGATTGT 59.412 36.000 0.00 0.00 32.89 2.71
5362 5871 5.523188 AGAGAAGCGAGCAATAGAGAAAATG 59.477 40.000 0.00 0.00 0.00 2.32
5383 5893 2.087646 GGTAAAGAGCAGGCCAAAGAG 58.912 52.381 5.01 0.00 0.00 2.85
5400 5910 4.855715 TTTTGCAAATCCATCGTTGGTA 57.144 36.364 13.65 0.34 44.06 3.25
5424 5934 1.535462 CATGGAAAAGGACACCGACAC 59.465 52.381 0.00 0.00 0.00 3.67
5553 6070 9.276791 AGGGCATCTTAGATCTGATTAATATCA 57.723 33.333 5.18 0.00 38.45 2.15
5608 6125 6.500910 TCATTCAGATGCTAATGAACAATGC 58.499 36.000 0.00 0.00 38.74 3.56
5609 6126 7.012989 TCCTCATTCAGATGCTAATGAACAATG 59.987 37.037 0.00 0.00 40.56 2.82
5610 6127 7.058525 TCCTCATTCAGATGCTAATGAACAAT 58.941 34.615 0.00 0.00 40.56 2.71
5611 6128 6.417258 TCCTCATTCAGATGCTAATGAACAA 58.583 36.000 0.00 0.00 40.56 2.83
5612 6129 5.993055 TCCTCATTCAGATGCTAATGAACA 58.007 37.500 0.00 0.00 40.56 3.18
5613 6130 6.932356 TTCCTCATTCAGATGCTAATGAAC 57.068 37.500 0.00 0.00 40.56 3.18
5614 6131 8.410912 CAAATTCCTCATTCAGATGCTAATGAA 58.589 33.333 0.00 1.50 40.56 2.57
5615 6132 7.013942 CCAAATTCCTCATTCAGATGCTAATGA 59.986 37.037 0.00 0.00 39.24 2.57
5616 6133 7.145985 CCAAATTCCTCATTCAGATGCTAATG 58.854 38.462 0.00 0.00 34.96 1.90
5617 6134 6.267014 CCCAAATTCCTCATTCAGATGCTAAT 59.733 38.462 0.00 0.00 33.14 1.73
5618 6135 5.595542 CCCAAATTCCTCATTCAGATGCTAA 59.404 40.000 0.00 0.00 33.14 3.09
5619 6136 5.135383 CCCAAATTCCTCATTCAGATGCTA 58.865 41.667 0.00 0.00 33.14 3.49
5620 6137 3.958798 CCCAAATTCCTCATTCAGATGCT 59.041 43.478 0.00 0.00 33.14 3.79
5621 6138 3.069158 CCCCAAATTCCTCATTCAGATGC 59.931 47.826 0.00 0.00 33.14 3.91
5622 6139 3.640029 CCCCCAAATTCCTCATTCAGATG 59.360 47.826 0.00 0.00 34.46 2.90
5623 6140 3.919834 CCCCCAAATTCCTCATTCAGAT 58.080 45.455 0.00 0.00 0.00 2.90
5624 6141 3.386932 CCCCCAAATTCCTCATTCAGA 57.613 47.619 0.00 0.00 0.00 3.27
5670 6187 9.261035 ACCTAGATCAGTATCTTTTCTTTCTGA 57.739 33.333 0.00 0.00 39.55 3.27
5673 6190 9.752961 GGTACCTAGATCAGTATCTTTTCTTTC 57.247 37.037 4.06 0.00 39.55 2.62
5674 6191 9.495382 AGGTACCTAGATCAGTATCTTTTCTTT 57.505 33.333 14.41 0.00 39.55 2.52
5675 6192 9.138596 GAGGTACCTAGATCAGTATCTTTTCTT 57.861 37.037 16.29 0.00 39.55 2.52
5676 6193 8.282982 TGAGGTACCTAGATCAGTATCTTTTCT 58.717 37.037 16.29 0.00 39.55 2.52
5677 6194 8.466617 TGAGGTACCTAGATCAGTATCTTTTC 57.533 38.462 16.29 0.00 39.55 2.29
5678 6195 8.865090 CATGAGGTACCTAGATCAGTATCTTTT 58.135 37.037 16.29 0.00 39.55 2.27
5679 6196 7.453126 CCATGAGGTACCTAGATCAGTATCTTT 59.547 40.741 16.29 0.00 39.55 2.52
5680 6197 6.951198 CCATGAGGTACCTAGATCAGTATCTT 59.049 42.308 16.29 0.00 39.55 2.40
5681 6198 6.489603 CCATGAGGTACCTAGATCAGTATCT 58.510 44.000 16.29 0.00 44.80 1.98
5682 6199 5.126384 GCCATGAGGTACCTAGATCAGTATC 59.874 48.000 16.29 0.00 37.19 2.24
5683 6200 5.020132 GCCATGAGGTACCTAGATCAGTAT 58.980 45.833 16.29 0.00 37.19 2.12
5684 6201 4.408276 GCCATGAGGTACCTAGATCAGTA 58.592 47.826 16.29 0.00 37.19 2.74
5692 6209 2.795291 ATGAGGCCATGAGGTACCTA 57.205 50.000 16.29 3.87 37.19 3.08
5721 6238 2.203625 GCCCAAGGGAAGCCAACA 60.204 61.111 9.92 0.00 37.50 3.33
5768 6285 7.960262 TCTCATGTATGTATTCTGAGAGCAAT 58.040 34.615 0.00 0.00 37.89 3.56
5842 6360 5.111989 CCACGTAGATTGACTCATTGACAT 58.888 41.667 0.00 0.00 0.00 3.06
5844 6362 3.307242 GCCACGTAGATTGACTCATTGAC 59.693 47.826 0.00 0.00 0.00 3.18
5845 6363 3.056179 TGCCACGTAGATTGACTCATTGA 60.056 43.478 0.00 0.00 0.00 2.57
5846 6364 3.261580 TGCCACGTAGATTGACTCATTG 58.738 45.455 0.00 0.00 0.00 2.82
5847 6365 3.610040 TGCCACGTAGATTGACTCATT 57.390 42.857 0.00 0.00 0.00 2.57
5848 6366 3.827008 ATGCCACGTAGATTGACTCAT 57.173 42.857 0.00 0.00 0.00 2.90
5849 6367 3.610040 AATGCCACGTAGATTGACTCA 57.390 42.857 0.00 0.00 0.00 3.41
5850 6368 4.184629 AGAAATGCCACGTAGATTGACTC 58.815 43.478 0.00 0.00 0.00 3.36
5851 6369 4.207891 AGAAATGCCACGTAGATTGACT 57.792 40.909 0.00 0.00 0.00 3.41
5862 6380 9.476202 AGAATTTAGTAACAAAAGAAATGCCAC 57.524 29.630 0.00 0.00 0.00 5.01
5997 6526 7.601856 TCAGATAAACAAGCTAAACAAATGGG 58.398 34.615 0.00 0.00 0.00 4.00
6007 6536 7.047891 CCATAGGTGTTCAGATAAACAAGCTA 58.952 38.462 0.00 0.00 40.62 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.