Multiple sequence alignment - TraesCS7A01G484700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G484700 chr7A 100.000 2774 0 0 1 2774 675576523 675579296 0.000000e+00 5123.0
1 TraesCS7A01G484700 chr7A 87.709 179 19 3 47 223 669512026 669512203 3.620000e-49 206.0
2 TraesCS7A01G484700 chr7B 88.462 1404 72 37 569 1931 654326938 654328292 0.000000e+00 1613.0
3 TraesCS7A01G484700 chr7B 88.889 693 46 15 980 1671 654203067 654202405 0.000000e+00 824.0
4 TraesCS7A01G484700 chr7B 87.190 726 51 19 759 1446 654708419 654709140 0.000000e+00 787.0
5 TraesCS7A01G484700 chr7B 88.278 418 35 9 2328 2743 617884226 617883821 3.210000e-134 488.0
6 TraesCS7A01G484700 chr7B 88.278 418 34 10 2328 2743 617854436 617854032 1.150000e-133 486.0
7 TraesCS7A01G484700 chr7B 88.278 418 34 10 2328 2743 617930190 617929786 1.150000e-133 486.0
8 TraesCS7A01G484700 chr7B 88.278 418 34 11 2328 2743 618046969 618046565 1.150000e-133 486.0
9 TraesCS7A01G484700 chr7B 88.278 418 34 10 2328 2743 618089729 618089325 1.150000e-133 486.0
10 TraesCS7A01G484700 chr7B 88.038 418 36 9 2328 2743 618093822 618093417 1.490000e-132 483.0
11 TraesCS7A01G484700 chr7B 88.038 418 35 11 2328 2743 617947880 617947476 5.370000e-132 481.0
12 TraesCS7A01G484700 chr7B 88.038 418 35 11 2328 2743 618031911 618031507 5.370000e-132 481.0
13 TraesCS7A01G484700 chr7B 88.067 419 33 12 2328 2743 618073213 618072809 5.370000e-132 481.0
14 TraesCS7A01G484700 chr7B 89.219 269 14 6 1666 1931 654173435 654173179 3.450000e-84 322.0
15 TraesCS7A01G484700 chr7B 80.973 226 36 7 2 225 448652483 448652703 3.670000e-39 172.0
16 TraesCS7A01G484700 chr7B 95.946 74 3 0 2040 2113 654508525 654508598 1.350000e-23 121.0
17 TraesCS7A01G484700 chr7B 87.736 106 7 4 2008 2113 654785451 654785550 4.850000e-23 119.0
18 TraesCS7A01G484700 chr7B 76.451 293 24 25 495 779 654208036 654207781 1.750000e-22 117.0
19 TraesCS7A01G484700 chr7B 86.792 106 8 3 2008 2113 654494316 654494415 2.260000e-21 113.0
20 TraesCS7A01G484700 chr7B 91.781 73 6 0 2041 2113 654861496 654861568 4.890000e-18 102.0
21 TraesCS7A01G484700 chr7B 95.745 47 2 0 2067 2113 654169781 654169827 2.960000e-10 76.8
22 TraesCS7A01G484700 chr7D 88.671 1377 68 44 577 1931 585540994 585542304 0.000000e+00 1598.0
23 TraesCS7A01G484700 chr7D 85.656 732 44 24 2058 2774 585542902 585543587 0.000000e+00 713.0
24 TraesCS7A01G484700 chr7D 84.018 219 26 9 1 215 610767848 610768061 4.680000e-48 202.0
25 TraesCS7A01G484700 chr7D 82.743 226 34 5 1 223 577256601 577256824 2.180000e-46 196.0
26 TraesCS7A01G484700 chr7D 87.619 105 7 2 2009 2113 585547406 585547504 1.750000e-22 117.0
27 TraesCS7A01G484700 chr5D 83.016 789 66 35 992 1767 547418230 547418963 0.000000e+00 652.0
28 TraesCS7A01G484700 chr5D 82.575 637 53 34 1146 1767 547495278 547495871 2.460000e-140 508.0
29 TraesCS7A01G484700 chr4A 81.941 814 65 40 976 1767 621515444 621514691 5.080000e-172 614.0
30 TraesCS7A01G484700 chr5B 80.808 792 76 34 989 1764 690952157 690952888 4.040000e-153 551.0
31 TraesCS7A01G484700 chr6A 85.955 178 20 4 2 177 585495773 585495947 4.720000e-43 185.0
32 TraesCS7A01G484700 chr5A 85.876 177 22 3 1 177 211640146 211640319 4.720000e-43 185.0
33 TraesCS7A01G484700 chr6D 81.498 227 35 7 1 223 111953036 111953259 2.200000e-41 180.0
34 TraesCS7A01G484700 chr4D 81.735 219 32 7 1 215 483205485 483205699 2.840000e-40 176.0
35 TraesCS7A01G484700 chr1B 80.995 221 30 10 1 215 34200825 34200611 6.150000e-37 165.0
36 TraesCS7A01G484700 chrUn 95.946 74 3 0 2040 2113 278314969 278315042 1.350000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G484700 chr7A 675576523 675579296 2773 False 5123.000000 5123 100.000000 1 2774 1 chr7A.!!$F2 2773
1 TraesCS7A01G484700 chr7B 654326938 654328292 1354 False 1613.000000 1613 88.462000 569 1931 1 chr7B.!!$F3 1362
2 TraesCS7A01G484700 chr7B 654202405 654203067 662 True 824.000000 824 88.889000 980 1671 1 chr7B.!!$R9 691
3 TraesCS7A01G484700 chr7B 654708419 654709140 721 False 787.000000 787 87.190000 759 1446 1 chr7B.!!$F6 687
4 TraesCS7A01G484700 chr7B 618089325 618093822 4497 True 484.500000 486 88.158000 2328 2743 2 chr7B.!!$R11 415
5 TraesCS7A01G484700 chr7D 585540994 585547504 6510 False 809.333333 1598 87.315333 577 2774 3 chr7D.!!$F3 2197
6 TraesCS7A01G484700 chr5D 547418230 547418963 733 False 652.000000 652 83.016000 992 1767 1 chr5D.!!$F1 775
7 TraesCS7A01G484700 chr5D 547495278 547495871 593 False 508.000000 508 82.575000 1146 1767 1 chr5D.!!$F2 621
8 TraesCS7A01G484700 chr4A 621514691 621515444 753 True 614.000000 614 81.941000 976 1767 1 chr4A.!!$R1 791
9 TraesCS7A01G484700 chr5B 690952157 690952888 731 False 551.000000 551 80.808000 989 1764 1 chr5B.!!$F1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
406 407 0.036294 AGAGTTTGGCTAAGGGACGC 60.036 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2169 2817 0.035598 TGCTGCTTTACTGGCCGTTA 59.964 50.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.458573 AATGTGTATAGAAAAACTGTTGACCA 57.541 30.769 0.00 0.00 0.00 4.02
26 27 8.635765 ATGTGTATAGAAAAACTGTTGACCAT 57.364 30.769 0.00 0.00 0.00 3.55
27 28 7.870826 TGTGTATAGAAAAACTGTTGACCATG 58.129 34.615 0.00 0.00 0.00 3.66
28 29 6.801862 GTGTATAGAAAAACTGTTGACCATGC 59.198 38.462 0.00 0.00 0.00 4.06
29 30 6.488344 TGTATAGAAAAACTGTTGACCATGCA 59.512 34.615 0.00 0.00 0.00 3.96
30 31 4.942761 AGAAAAACTGTTGACCATGCAT 57.057 36.364 0.00 0.00 0.00 3.96
31 32 5.280654 AGAAAAACTGTTGACCATGCATT 57.719 34.783 0.00 0.00 0.00 3.56
32 33 5.051816 AGAAAAACTGTTGACCATGCATTG 58.948 37.500 0.00 0.00 0.00 2.82
33 34 4.405116 AAAACTGTTGACCATGCATTGT 57.595 36.364 2.50 2.50 0.00 2.71
34 35 4.405116 AAACTGTTGACCATGCATTGTT 57.595 36.364 4.71 0.00 0.00 2.83
35 36 4.405116 AACTGTTGACCATGCATTGTTT 57.595 36.364 4.71 0.00 0.00 2.83
36 37 5.528043 AACTGTTGACCATGCATTGTTTA 57.472 34.783 4.71 0.00 0.00 2.01
37 38 5.528043 ACTGTTGACCATGCATTGTTTAA 57.472 34.783 4.71 1.70 0.00 1.52
38 39 6.100404 ACTGTTGACCATGCATTGTTTAAT 57.900 33.333 4.71 0.00 0.00 1.40
39 40 6.523840 ACTGTTGACCATGCATTGTTTAATT 58.476 32.000 4.71 0.00 0.00 1.40
40 41 7.665690 ACTGTTGACCATGCATTGTTTAATTA 58.334 30.769 4.71 0.00 0.00 1.40
41 42 8.313292 ACTGTTGACCATGCATTGTTTAATTAT 58.687 29.630 4.71 0.00 0.00 1.28
42 43 8.476657 TGTTGACCATGCATTGTTTAATTATG 57.523 30.769 4.71 0.00 0.00 1.90
43 44 8.309656 TGTTGACCATGCATTGTTTAATTATGA 58.690 29.630 4.71 0.00 0.00 2.15
44 45 9.316730 GTTGACCATGCATTGTTTAATTATGAT 57.683 29.630 4.71 0.00 0.00 2.45
99 100 9.322773 TCAAGCATTTGAACAAAATATTGAACA 57.677 25.926 15.21 0.00 40.26 3.18
100 101 9.588774 CAAGCATTTGAACAAAATATTGAACAG 57.411 29.630 4.12 0.00 36.28 3.16
101 102 8.891671 AGCATTTGAACAAAATATTGAACAGT 57.108 26.923 4.12 0.00 38.94 3.55
102 103 9.328845 AGCATTTGAACAAAATATTGAACAGTT 57.671 25.926 4.12 0.00 38.94 3.16
168 169 8.927675 TGTGTATAGGAAAAAGTTAACCATGT 57.072 30.769 0.88 0.00 0.00 3.21
169 170 9.005777 TGTGTATAGGAAAAAGTTAACCATGTC 57.994 33.333 0.88 0.00 0.00 3.06
170 171 9.227777 GTGTATAGGAAAAAGTTAACCATGTCT 57.772 33.333 0.88 0.00 0.00 3.41
171 172 9.802039 TGTATAGGAAAAAGTTAACCATGTCTT 57.198 29.630 0.88 0.00 0.00 3.01
212 213 9.316730 TGGCATTTAGAAAAATATTGATCAAGC 57.683 29.630 14.54 6.19 33.45 4.01
213 214 9.316730 GGCATTTAGAAAAATATTGATCAAGCA 57.683 29.630 14.54 4.67 33.45 3.91
227 228 6.647212 TGATCAAGCATGTAAGAAAGTACG 57.353 37.500 0.00 0.00 0.00 3.67
228 229 6.163476 TGATCAAGCATGTAAGAAAGTACGT 58.837 36.000 0.00 0.00 0.00 3.57
229 230 6.310467 TGATCAAGCATGTAAGAAAGTACGTC 59.690 38.462 0.00 0.00 0.00 4.34
230 231 4.927425 TCAAGCATGTAAGAAAGTACGTCC 59.073 41.667 0.00 0.00 0.00 4.79
231 232 3.508762 AGCATGTAAGAAAGTACGTCCG 58.491 45.455 0.00 0.00 0.00 4.79
232 233 2.601763 GCATGTAAGAAAGTACGTCCGG 59.398 50.000 0.00 0.00 0.00 5.14
233 234 3.841643 CATGTAAGAAAGTACGTCCGGT 58.158 45.455 0.00 0.00 0.00 5.28
234 235 3.559238 TGTAAGAAAGTACGTCCGGTC 57.441 47.619 0.00 0.00 0.00 4.79
235 236 2.884012 TGTAAGAAAGTACGTCCGGTCA 59.116 45.455 0.00 0.00 0.00 4.02
236 237 2.428888 AAGAAAGTACGTCCGGTCAC 57.571 50.000 0.00 0.00 0.00 3.67
237 238 0.239347 AGAAAGTACGTCCGGTCACG 59.761 55.000 13.63 13.63 45.65 4.35
238 239 1.339946 GAAAGTACGTCCGGTCACGC 61.340 60.000 14.99 0.89 43.93 5.34
239 240 2.753931 AAAGTACGTCCGGTCACGCC 62.754 60.000 14.99 6.71 43.93 5.68
240 241 4.041917 GTACGTCCGGTCACGCCA 62.042 66.667 14.99 1.44 43.93 5.69
241 242 4.041917 TACGTCCGGTCACGCCAC 62.042 66.667 14.99 0.00 43.93 5.01
244 245 3.986006 GTCCGGTCACGCCACTGA 61.986 66.667 0.00 0.00 39.22 3.41
245 246 3.986006 TCCGGTCACGCCACTGAC 61.986 66.667 0.00 0.00 40.02 3.51
249 250 2.261671 GTCACGCCACTGACCGAT 59.738 61.111 0.00 0.00 35.44 4.18
250 251 1.509463 GTCACGCCACTGACCGATA 59.491 57.895 0.00 0.00 35.44 2.92
251 252 0.801067 GTCACGCCACTGACCGATAC 60.801 60.000 0.00 0.00 35.44 2.24
252 253 1.214325 CACGCCACTGACCGATACA 59.786 57.895 0.00 0.00 0.00 2.29
253 254 0.179111 CACGCCACTGACCGATACAT 60.179 55.000 0.00 0.00 0.00 2.29
254 255 0.179111 ACGCCACTGACCGATACATG 60.179 55.000 0.00 0.00 0.00 3.21
255 256 0.102300 CGCCACTGACCGATACATGA 59.898 55.000 0.00 0.00 0.00 3.07
256 257 1.269778 CGCCACTGACCGATACATGAT 60.270 52.381 0.00 0.00 0.00 2.45
257 258 2.408050 GCCACTGACCGATACATGATC 58.592 52.381 0.00 0.00 0.00 2.92
269 270 2.827800 ACATGATCGCACTAGATGGG 57.172 50.000 0.00 0.00 42.62 4.00
270 271 2.042464 ACATGATCGCACTAGATGGGT 58.958 47.619 0.00 0.00 41.93 4.51
271 272 2.224137 ACATGATCGCACTAGATGGGTG 60.224 50.000 0.00 0.00 41.93 4.61
276 277 2.586079 CACTAGATGGGTGCCGCG 60.586 66.667 0.00 0.00 0.00 6.46
277 278 2.758327 ACTAGATGGGTGCCGCGA 60.758 61.111 8.23 0.00 0.00 5.87
278 279 2.279517 CTAGATGGGTGCCGCGAC 60.280 66.667 8.23 0.00 0.00 5.19
279 280 3.792053 CTAGATGGGTGCCGCGACC 62.792 68.421 8.23 8.35 34.96 4.79
294 295 3.993376 GACCCGAACGCATGCGGTA 62.993 63.158 39.95 0.00 45.85 4.02
295 296 3.261951 CCCGAACGCATGCGGTAG 61.262 66.667 39.95 34.25 45.85 3.18
296 297 3.261951 CCGAACGCATGCGGTAGG 61.262 66.667 36.92 36.92 44.56 3.18
297 298 2.508439 CGAACGCATGCGGTAGGT 60.508 61.111 39.95 19.40 40.58 3.08
298 299 2.098233 CGAACGCATGCGGTAGGTT 61.098 57.895 39.95 26.33 40.58 3.50
299 300 1.632046 CGAACGCATGCGGTAGGTTT 61.632 55.000 39.95 25.61 40.58 3.27
300 301 1.361793 GAACGCATGCGGTAGGTTTA 58.638 50.000 39.95 0.00 40.58 2.01
301 302 1.937899 GAACGCATGCGGTAGGTTTAT 59.062 47.619 39.95 16.32 40.58 1.40
302 303 1.295792 ACGCATGCGGTAGGTTTATG 58.704 50.000 39.95 11.88 44.69 1.90
303 304 0.586319 CGCATGCGGTAGGTTTATGG 59.414 55.000 31.99 0.00 35.56 2.74
304 305 0.951558 GCATGCGGTAGGTTTATGGG 59.048 55.000 0.00 0.00 0.00 4.00
305 306 1.749286 GCATGCGGTAGGTTTATGGGT 60.749 52.381 0.00 0.00 0.00 4.51
306 307 2.218603 CATGCGGTAGGTTTATGGGTC 58.781 52.381 0.00 0.00 0.00 4.46
307 308 0.176219 TGCGGTAGGTTTATGGGTCG 59.824 55.000 0.00 0.00 0.00 4.79
308 309 0.531311 GCGGTAGGTTTATGGGTCGG 60.531 60.000 0.00 0.00 0.00 4.79
309 310 0.531311 CGGTAGGTTTATGGGTCGGC 60.531 60.000 0.00 0.00 0.00 5.54
310 311 0.531311 GGTAGGTTTATGGGTCGGCG 60.531 60.000 0.00 0.00 0.00 6.46
311 312 0.176449 GTAGGTTTATGGGTCGGCGT 59.824 55.000 6.85 0.00 0.00 5.68
312 313 0.461135 TAGGTTTATGGGTCGGCGTC 59.539 55.000 6.85 0.00 0.00 5.19
313 314 2.169146 GGTTTATGGGTCGGCGTCG 61.169 63.158 1.15 1.15 37.82 5.12
314 315 2.169146 GTTTATGGGTCGGCGTCGG 61.169 63.158 10.62 0.00 36.95 4.79
315 316 2.349672 TTTATGGGTCGGCGTCGGA 61.350 57.895 10.62 0.00 36.95 4.55
316 317 2.287457 TTTATGGGTCGGCGTCGGAG 62.287 60.000 10.62 0.00 36.95 4.63
317 318 3.702529 TATGGGTCGGCGTCGGAGA 62.703 63.158 10.62 0.00 36.95 3.71
318 319 2.971095 TATGGGTCGGCGTCGGAGAT 62.971 60.000 10.62 0.00 40.67 2.75
326 327 4.159266 CGTCGGAGATGCCCTCTA 57.841 61.111 3.66 0.00 41.66 2.43
327 328 2.415825 CGTCGGAGATGCCCTCTAA 58.584 57.895 3.66 0.00 41.66 2.10
328 329 0.312416 CGTCGGAGATGCCCTCTAAG 59.688 60.000 3.66 0.00 41.66 2.18
329 330 1.693627 GTCGGAGATGCCCTCTAAGA 58.306 55.000 3.66 0.00 41.66 2.10
330 331 2.243810 GTCGGAGATGCCCTCTAAGAT 58.756 52.381 3.66 0.00 41.66 2.40
331 332 2.230266 GTCGGAGATGCCCTCTAAGATC 59.770 54.545 3.66 0.00 41.66 2.75
332 333 1.548269 CGGAGATGCCCTCTAAGATCC 59.452 57.143 3.66 0.00 41.66 3.36
333 334 1.905894 GGAGATGCCCTCTAAGATCCC 59.094 57.143 3.66 0.00 41.66 3.85
334 335 1.548269 GAGATGCCCTCTAAGATCCCG 59.452 57.143 0.00 0.00 38.86 5.14
335 336 1.148027 AGATGCCCTCTAAGATCCCGA 59.852 52.381 0.00 0.00 30.26 5.14
336 337 1.548269 GATGCCCTCTAAGATCCCGAG 59.452 57.143 0.00 0.00 0.00 4.63
337 338 0.556258 TGCCCTCTAAGATCCCGAGA 59.444 55.000 5.38 0.00 0.00 4.04
338 339 1.253100 GCCCTCTAAGATCCCGAGAG 58.747 60.000 8.51 8.51 37.13 3.20
339 340 1.253100 CCCTCTAAGATCCCGAGAGC 58.747 60.000 9.59 0.00 36.23 4.09
340 341 0.878416 CCTCTAAGATCCCGAGAGCG 59.122 60.000 9.59 0.00 36.23 5.03
341 342 1.543650 CCTCTAAGATCCCGAGAGCGA 60.544 57.143 9.59 0.00 40.82 4.93
342 343 1.804151 CTCTAAGATCCCGAGAGCGAG 59.196 57.143 3.85 0.00 40.82 5.03
343 344 1.416772 TCTAAGATCCCGAGAGCGAGA 59.583 52.381 0.00 0.00 40.82 4.04
344 345 1.804151 CTAAGATCCCGAGAGCGAGAG 59.196 57.143 0.00 0.00 40.82 3.20
345 346 0.181587 AAGATCCCGAGAGCGAGAGA 59.818 55.000 0.00 0.00 40.82 3.10
346 347 0.250295 AGATCCCGAGAGCGAGAGAG 60.250 60.000 0.00 0.00 40.82 3.20
347 348 0.534203 GATCCCGAGAGCGAGAGAGT 60.534 60.000 0.00 0.00 40.82 3.24
348 349 0.106918 ATCCCGAGAGCGAGAGAGTT 60.107 55.000 0.00 0.00 40.82 3.01
349 350 0.322636 TCCCGAGAGCGAGAGAGTTT 60.323 55.000 0.00 0.00 40.82 2.66
350 351 0.528470 CCCGAGAGCGAGAGAGTTTT 59.472 55.000 0.00 0.00 40.82 2.43
351 352 1.067495 CCCGAGAGCGAGAGAGTTTTT 60.067 52.381 0.00 0.00 40.82 1.94
380 381 8.871686 TTTTAATCTTTTTGTGAAAGGAGAGC 57.128 30.769 0.00 0.00 34.81 4.09
381 382 4.756084 ATCTTTTTGTGAAAGGAGAGCG 57.244 40.909 0.00 0.00 34.81 5.03
382 383 3.804036 TCTTTTTGTGAAAGGAGAGCGA 58.196 40.909 0.00 0.00 0.00 4.93
383 384 3.809832 TCTTTTTGTGAAAGGAGAGCGAG 59.190 43.478 0.00 0.00 0.00 5.03
384 385 2.169832 TTTGTGAAAGGAGAGCGAGG 57.830 50.000 0.00 0.00 0.00 4.63
385 386 0.321671 TTGTGAAAGGAGAGCGAGGG 59.678 55.000 0.00 0.00 0.00 4.30
386 387 1.219393 GTGAAAGGAGAGCGAGGGG 59.781 63.158 0.00 0.00 0.00 4.79
387 388 1.078528 TGAAAGGAGAGCGAGGGGA 59.921 57.895 0.00 0.00 0.00 4.81
388 389 0.972983 TGAAAGGAGAGCGAGGGGAG 60.973 60.000 0.00 0.00 0.00 4.30
389 390 0.684805 GAAAGGAGAGCGAGGGGAGA 60.685 60.000 0.00 0.00 0.00 3.71
390 391 0.686112 AAAGGAGAGCGAGGGGAGAG 60.686 60.000 0.00 0.00 0.00 3.20
391 392 1.869824 AAGGAGAGCGAGGGGAGAGT 61.870 60.000 0.00 0.00 0.00 3.24
392 393 1.380650 GGAGAGCGAGGGGAGAGTT 60.381 63.158 0.00 0.00 0.00 3.01
393 394 0.973496 GGAGAGCGAGGGGAGAGTTT 60.973 60.000 0.00 0.00 0.00 2.66
394 395 0.174617 GAGAGCGAGGGGAGAGTTTG 59.825 60.000 0.00 0.00 0.00 2.93
395 396 1.219393 GAGCGAGGGGAGAGTTTGG 59.781 63.158 0.00 0.00 0.00 3.28
396 397 2.436824 GCGAGGGGAGAGTTTGGC 60.437 66.667 0.00 0.00 0.00 4.52
397 398 2.960688 GCGAGGGGAGAGTTTGGCT 61.961 63.158 0.00 0.00 0.00 4.75
398 399 1.614241 GCGAGGGGAGAGTTTGGCTA 61.614 60.000 0.00 0.00 0.00 3.93
399 400 0.902531 CGAGGGGAGAGTTTGGCTAA 59.097 55.000 0.00 0.00 0.00 3.09
400 401 1.134670 CGAGGGGAGAGTTTGGCTAAG 60.135 57.143 0.00 0.00 0.00 2.18
401 402 1.210722 GAGGGGAGAGTTTGGCTAAGG 59.789 57.143 0.00 0.00 0.00 2.69
402 403 0.256177 GGGGAGAGTTTGGCTAAGGG 59.744 60.000 0.00 0.00 0.00 3.95
403 404 1.286248 GGGAGAGTTTGGCTAAGGGA 58.714 55.000 0.00 0.00 0.00 4.20
404 405 1.065345 GGGAGAGTTTGGCTAAGGGAC 60.065 57.143 0.00 0.00 0.00 4.46
405 406 1.405661 GGAGAGTTTGGCTAAGGGACG 60.406 57.143 0.00 0.00 0.00 4.79
406 407 0.036294 AGAGTTTGGCTAAGGGACGC 60.036 55.000 0.00 0.00 0.00 5.19
407 408 0.321298 GAGTTTGGCTAAGGGACGCA 60.321 55.000 0.00 0.00 0.00 5.24
408 409 0.109723 AGTTTGGCTAAGGGACGCAA 59.890 50.000 0.00 0.00 0.00 4.85
409 410 0.955905 GTTTGGCTAAGGGACGCAAA 59.044 50.000 0.00 0.00 0.00 3.68
410 411 0.955905 TTTGGCTAAGGGACGCAAAC 59.044 50.000 0.00 0.00 0.00 2.93
411 412 0.109723 TTGGCTAAGGGACGCAAACT 59.890 50.000 0.00 0.00 0.00 2.66
412 413 0.321298 TGGCTAAGGGACGCAAACTC 60.321 55.000 0.00 0.00 0.00 3.01
413 414 1.025113 GGCTAAGGGACGCAAACTCC 61.025 60.000 0.00 0.00 0.00 3.85
414 415 0.321298 GCTAAGGGACGCAAACTCCA 60.321 55.000 0.00 0.00 0.00 3.86
415 416 1.679032 GCTAAGGGACGCAAACTCCAT 60.679 52.381 0.00 0.00 0.00 3.41
416 417 2.280628 CTAAGGGACGCAAACTCCATC 58.719 52.381 0.00 0.00 0.00 3.51
417 418 0.693049 AAGGGACGCAAACTCCATCT 59.307 50.000 0.00 0.00 0.00 2.90
418 419 1.568504 AGGGACGCAAACTCCATCTA 58.431 50.000 0.00 0.00 0.00 1.98
419 420 1.207329 AGGGACGCAAACTCCATCTAC 59.793 52.381 0.00 0.00 0.00 2.59
420 421 1.207329 GGGACGCAAACTCCATCTACT 59.793 52.381 0.00 0.00 0.00 2.57
421 422 2.541556 GGACGCAAACTCCATCTACTC 58.458 52.381 0.00 0.00 0.00 2.59
422 423 2.166664 GGACGCAAACTCCATCTACTCT 59.833 50.000 0.00 0.00 0.00 3.24
423 424 3.182967 GACGCAAACTCCATCTACTCTG 58.817 50.000 0.00 0.00 0.00 3.35
424 425 2.093973 ACGCAAACTCCATCTACTCTGG 60.094 50.000 0.00 0.00 34.93 3.86
425 426 2.093973 CGCAAACTCCATCTACTCTGGT 60.094 50.000 0.00 0.00 35.19 4.00
426 427 3.265791 GCAAACTCCATCTACTCTGGTG 58.734 50.000 0.00 0.00 35.19 4.17
427 428 3.055819 GCAAACTCCATCTACTCTGGTGA 60.056 47.826 0.00 0.00 35.19 4.02
428 429 4.499183 CAAACTCCATCTACTCTGGTGAC 58.501 47.826 0.00 0.00 35.19 3.67
429 430 2.370349 ACTCCATCTACTCTGGTGACG 58.630 52.381 0.00 0.00 35.19 4.35
430 431 1.066303 CTCCATCTACTCTGGTGACGC 59.934 57.143 0.00 0.00 35.19 5.19
431 432 0.817654 CCATCTACTCTGGTGACGCA 59.182 55.000 0.00 0.00 0.00 5.24
432 433 1.469940 CCATCTACTCTGGTGACGCAC 60.470 57.143 1.92 1.92 0.00 5.34
440 441 3.986006 GGTGACGCACCGGACTCA 61.986 66.667 9.46 0.00 44.95 3.41
441 442 2.261671 GTGACGCACCGGACTCAT 59.738 61.111 9.46 0.00 0.00 2.90
442 443 1.805945 GTGACGCACCGGACTCATC 60.806 63.158 9.46 0.00 0.00 2.92
443 444 2.272447 TGACGCACCGGACTCATCA 61.272 57.895 9.46 1.84 0.00 3.07
444 445 1.141881 GACGCACCGGACTCATCAT 59.858 57.895 9.46 0.00 0.00 2.45
445 446 1.148157 GACGCACCGGACTCATCATG 61.148 60.000 9.46 0.00 0.00 3.07
446 447 1.153568 CGCACCGGACTCATCATGT 60.154 57.895 9.46 0.00 0.00 3.21
447 448 1.148157 CGCACCGGACTCATCATGTC 61.148 60.000 9.46 0.00 0.00 3.06
453 454 2.787473 GGACTCATCATGTCCCAACA 57.213 50.000 1.76 0.00 46.01 3.33
454 455 3.071874 GGACTCATCATGTCCCAACAA 57.928 47.619 1.76 0.00 46.01 2.83
455 456 2.749621 GGACTCATCATGTCCCAACAAC 59.250 50.000 1.76 0.00 46.01 3.32
456 457 3.411446 GACTCATCATGTCCCAACAACA 58.589 45.455 0.00 0.00 39.30 3.33
457 458 3.820467 GACTCATCATGTCCCAACAACAA 59.180 43.478 0.00 0.00 39.30 2.83
458 459 4.214310 ACTCATCATGTCCCAACAACAAA 58.786 39.130 0.00 0.00 39.30 2.83
459 460 4.037923 ACTCATCATGTCCCAACAACAAAC 59.962 41.667 0.00 0.00 39.30 2.93
460 461 4.214310 TCATCATGTCCCAACAACAAACT 58.786 39.130 0.00 0.00 39.30 2.66
461 462 4.648762 TCATCATGTCCCAACAACAAACTT 59.351 37.500 0.00 0.00 39.30 2.66
462 463 4.383850 TCATGTCCCAACAACAAACTTG 57.616 40.909 0.00 0.00 39.30 3.16
463 464 3.131933 TCATGTCCCAACAACAAACTTGG 59.868 43.478 0.00 0.00 39.30 3.61
464 465 1.205893 TGTCCCAACAACAAACTTGGC 59.794 47.619 0.00 0.00 36.36 4.52
465 466 1.205893 GTCCCAACAACAAACTTGGCA 59.794 47.619 0.00 0.00 36.36 4.92
466 467 1.480137 TCCCAACAACAAACTTGGCAG 59.520 47.619 0.00 0.00 36.36 4.85
467 468 1.206849 CCCAACAACAAACTTGGCAGT 59.793 47.619 0.00 0.00 36.36 4.40
468 469 2.270047 CCAACAACAAACTTGGCAGTG 58.730 47.619 0.00 0.00 31.60 3.66
469 470 2.353605 CCAACAACAAACTTGGCAGTGT 60.354 45.455 0.00 0.00 31.60 3.55
470 471 3.324993 CAACAACAAACTTGGCAGTGTT 58.675 40.909 2.75 2.75 31.60 3.32
471 472 4.489810 CAACAACAAACTTGGCAGTGTTA 58.510 39.130 8.07 0.00 31.60 2.41
472 473 4.792521 ACAACAAACTTGGCAGTGTTAA 57.207 36.364 8.07 0.00 31.60 2.01
473 474 5.140747 ACAACAAACTTGGCAGTGTTAAA 57.859 34.783 8.07 0.00 31.60 1.52
474 475 5.542779 ACAACAAACTTGGCAGTGTTAAAA 58.457 33.333 8.07 0.00 31.60 1.52
475 476 5.992217 ACAACAAACTTGGCAGTGTTAAAAA 59.008 32.000 8.07 0.00 31.60 1.94
505 506 2.712057 AAAATTGTCCAGCTGCGAAG 57.288 45.000 8.66 0.00 0.00 3.79
519 520 3.098032 CGAAGCAAAGCAAAGCTCC 57.902 52.632 0.00 0.00 40.90 4.70
520 521 0.387750 CGAAGCAAAGCAAAGCTCCC 60.388 55.000 0.00 0.00 40.90 4.30
521 522 0.964700 GAAGCAAAGCAAAGCTCCCT 59.035 50.000 0.00 0.00 40.90 4.20
522 523 0.964700 AAGCAAAGCAAAGCTCCCTC 59.035 50.000 0.00 0.00 40.90 4.30
523 524 1.211190 GCAAAGCAAAGCTCCCTCG 59.789 57.895 0.00 0.00 38.25 4.63
524 525 1.518903 GCAAAGCAAAGCTCCCTCGT 61.519 55.000 0.00 0.00 38.25 4.18
525 526 0.954452 CAAAGCAAAGCTCCCTCGTT 59.046 50.000 0.00 0.00 38.25 3.85
526 527 0.954452 AAAGCAAAGCTCCCTCGTTG 59.046 50.000 0.00 0.00 38.25 4.10
527 528 0.179018 AAGCAAAGCTCCCTCGTTGT 60.179 50.000 0.00 0.00 38.25 3.32
528 529 0.603975 AGCAAAGCTCCCTCGTTGTC 60.604 55.000 0.00 0.00 30.62 3.18
529 530 1.901650 GCAAAGCTCCCTCGTTGTCG 61.902 60.000 0.00 0.00 38.55 4.35
530 531 1.668151 AAAGCTCCCTCGTTGTCGC 60.668 57.895 0.00 0.00 36.96 5.19
531 532 3.916392 AAGCTCCCTCGTTGTCGCG 62.916 63.158 0.00 0.00 36.96 5.87
532 533 4.415332 GCTCCCTCGTTGTCGCGA 62.415 66.667 3.71 3.71 39.22 5.87
533 534 2.504244 CTCCCTCGTTGTCGCGAC 60.504 66.667 31.66 31.66 36.80 5.19
534 535 2.979197 CTCCCTCGTTGTCGCGACT 61.979 63.158 36.27 0.00 36.80 4.18
535 536 2.504244 CCCTCGTTGTCGCGACTC 60.504 66.667 36.27 26.92 36.80 3.36
536 537 2.561885 CCTCGTTGTCGCGACTCT 59.438 61.111 36.27 0.00 36.80 3.24
537 538 1.642037 CCCTCGTTGTCGCGACTCTA 61.642 60.000 36.27 20.60 36.80 2.43
538 539 0.247735 CCTCGTTGTCGCGACTCTAG 60.248 60.000 36.27 26.82 36.80 2.43
539 540 0.443088 CTCGTTGTCGCGACTCTAGT 59.557 55.000 36.27 0.00 36.80 2.57
540 541 0.441533 TCGTTGTCGCGACTCTAGTC 59.558 55.000 36.27 19.20 35.83 2.59
541 542 0.520827 CGTTGTCGCGACTCTAGTCC 60.521 60.000 36.27 16.35 41.86 3.85
542 543 0.520404 GTTGTCGCGACTCTAGTCCA 59.480 55.000 36.27 14.02 41.86 4.02
543 544 0.803117 TTGTCGCGACTCTAGTCCAG 59.197 55.000 36.27 0.00 41.86 3.86
544 545 0.321387 TGTCGCGACTCTAGTCCAGT 60.321 55.000 36.27 0.00 41.86 4.00
545 546 0.374410 GTCGCGACTCTAGTCCAGTC 59.626 60.000 31.12 0.00 41.86 3.51
546 547 0.743701 TCGCGACTCTAGTCCAGTCC 60.744 60.000 3.71 0.00 41.86 3.85
547 548 1.025113 CGCGACTCTAGTCCAGTCCA 61.025 60.000 0.00 0.00 41.86 4.02
548 549 0.452585 GCGACTCTAGTCCAGTCCAC 59.547 60.000 4.58 0.00 41.86 4.02
549 550 1.096416 CGACTCTAGTCCAGTCCACC 58.904 60.000 4.58 0.00 41.86 4.61
550 551 1.096416 GACTCTAGTCCAGTCCACCG 58.904 60.000 0.00 0.00 39.07 4.94
551 552 0.697079 ACTCTAGTCCAGTCCACCGA 59.303 55.000 0.00 0.00 0.00 4.69
552 553 1.285373 ACTCTAGTCCAGTCCACCGAT 59.715 52.381 0.00 0.00 0.00 4.18
553 554 2.508716 ACTCTAGTCCAGTCCACCGATA 59.491 50.000 0.00 0.00 0.00 2.92
554 555 3.142951 CTCTAGTCCAGTCCACCGATAG 58.857 54.545 0.00 0.00 0.00 2.08
555 556 2.508716 TCTAGTCCAGTCCACCGATAGT 59.491 50.000 0.00 0.00 0.00 2.12
556 557 1.475403 AGTCCAGTCCACCGATAGTG 58.525 55.000 0.00 0.00 46.83 2.74
557 558 1.183549 GTCCAGTCCACCGATAGTGT 58.816 55.000 0.00 0.00 45.74 3.55
558 559 1.549170 GTCCAGTCCACCGATAGTGTT 59.451 52.381 0.00 0.00 45.74 3.32
559 560 2.756760 GTCCAGTCCACCGATAGTGTTA 59.243 50.000 0.00 0.00 45.74 2.41
560 561 3.194116 GTCCAGTCCACCGATAGTGTTAA 59.806 47.826 0.00 0.00 45.74 2.01
561 562 3.833650 TCCAGTCCACCGATAGTGTTAAA 59.166 43.478 0.00 0.00 45.74 1.52
562 563 4.283978 TCCAGTCCACCGATAGTGTTAAAA 59.716 41.667 0.00 0.00 45.74 1.52
563 564 4.998672 CCAGTCCACCGATAGTGTTAAAAA 59.001 41.667 0.00 0.00 45.74 1.94
564 565 5.646360 CCAGTCCACCGATAGTGTTAAAAAT 59.354 40.000 0.00 0.00 45.74 1.82
565 566 6.150474 CCAGTCCACCGATAGTGTTAAAAATT 59.850 38.462 0.00 0.00 45.74 1.82
566 567 7.021196 CAGTCCACCGATAGTGTTAAAAATTG 58.979 38.462 0.00 0.00 45.74 2.32
567 568 6.150474 AGTCCACCGATAGTGTTAAAAATTGG 59.850 38.462 0.00 0.00 45.74 3.16
568 569 5.099575 CCACCGATAGTGTTAAAAATTGGC 58.900 41.667 0.00 0.00 45.74 4.52
569 570 5.336055 CCACCGATAGTGTTAAAAATTGGCA 60.336 40.000 0.00 0.00 45.74 4.92
570 571 5.799936 CACCGATAGTGTTAAAAATTGGCAG 59.200 40.000 0.00 0.00 41.93 4.85
571 572 5.475564 ACCGATAGTGTTAAAAATTGGCAGT 59.524 36.000 0.00 0.00 0.00 4.40
572 573 5.799936 CCGATAGTGTTAAAAATTGGCAGTG 59.200 40.000 0.00 0.00 0.00 3.66
573 574 6.378582 CGATAGTGTTAAAAATTGGCAGTGT 58.621 36.000 0.00 0.00 0.00 3.55
574 575 6.861055 CGATAGTGTTAAAAATTGGCAGTGTT 59.139 34.615 0.00 0.00 0.00 3.32
579 580 5.698545 TGTTAAAAATTGGCAGTGTTATGGC 59.301 36.000 0.00 0.00 45.50 4.40
596 598 4.745751 CGGTTTCCGGCGCAGGTA 62.746 66.667 26.04 14.65 44.15 3.08
600 602 4.752879 TTCCGGCGCAGGTAGCAC 62.753 66.667 26.04 0.00 46.13 4.40
657 665 1.479709 CTCCCACCAGGTAGAGTGAG 58.520 60.000 9.78 1.06 36.01 3.51
688 696 7.388460 AGAGGACAAAGCAAGAAGAAATATG 57.612 36.000 0.00 0.00 0.00 1.78
750 765 4.731612 CACAGCTCGCTCGGCAGT 62.732 66.667 0.00 1.69 0.00 4.40
751 766 4.427661 ACAGCTCGCTCGGCAGTC 62.428 66.667 0.00 0.00 0.00 3.51
773 788 1.703411 CACCAACCAAACCAGACCAT 58.297 50.000 0.00 0.00 0.00 3.55
774 789 1.340889 CACCAACCAAACCAGACCATG 59.659 52.381 0.00 0.00 0.00 3.66
779 808 2.306847 ACCAAACCAGACCATGTCAAC 58.693 47.619 0.00 0.00 34.60 3.18
890 929 1.217882 CCGCGCTTTTATCTACCAGG 58.782 55.000 5.56 0.00 0.00 4.45
892 931 1.806623 CGCGCTTTTATCTACCAGGCT 60.807 52.381 5.56 0.00 0.00 4.58
911 950 3.195396 GGCTAGACCAGAGATGATCATCC 59.805 52.174 28.23 20.17 37.13 3.51
944 998 2.672996 CCACCACAAGGAAGGCCG 60.673 66.667 0.00 0.00 39.96 6.13
948 1002 1.073199 CCACAAGGAAGGCCGAAGT 59.927 57.895 0.00 0.00 39.96 3.01
1096 1174 2.443016 CCTCCTCCTCCTCCCACG 60.443 72.222 0.00 0.00 0.00 4.94
1139 1223 1.377463 AGCTCACGCTCGTCTACCT 60.377 57.895 0.00 0.00 45.15 3.08
1470 1605 2.761465 GCTCATAAGGGCCAGGGCT 61.761 63.158 13.81 0.00 41.60 5.19
1771 1918 2.659063 CGGTGATCCCTGCCTGTCA 61.659 63.158 0.00 0.00 0.00 3.58
1772 1919 1.685224 GGTGATCCCTGCCTGTCAA 59.315 57.895 0.00 0.00 0.00 3.18
1773 1920 0.038166 GGTGATCCCTGCCTGTCAAA 59.962 55.000 0.00 0.00 0.00 2.69
1774 1921 1.547675 GGTGATCCCTGCCTGTCAAAA 60.548 52.381 0.00 0.00 0.00 2.44
1775 1922 2.450476 GTGATCCCTGCCTGTCAAAAT 58.550 47.619 0.00 0.00 0.00 1.82
1812 1959 8.760569 TGTTTTTGTTTTCTTCAGTTTCACTTC 58.239 29.630 0.00 0.00 0.00 3.01
1813 1960 7.883229 TTTTGTTTTCTTCAGTTTCACTTCC 57.117 32.000 0.00 0.00 0.00 3.46
1814 1961 5.576447 TGTTTTCTTCAGTTTCACTTCCC 57.424 39.130 0.00 0.00 0.00 3.97
1831 1978 3.048337 TCCCGGTCAAAGTGTATTCAC 57.952 47.619 0.00 0.00 44.15 3.18
1852 1999 4.818546 CACCAGGATAGGATTTTGCAGTAG 59.181 45.833 0.00 0.00 0.00 2.57
1909 2057 2.029918 GTGGGAGTTGTCAATCAAAGCC 60.030 50.000 0.00 0.00 37.81 4.35
1911 2059 2.489722 GGGAGTTGTCAATCAAAGCCTC 59.510 50.000 0.00 0.00 37.81 4.70
1915 2063 5.234466 AGTTGTCAATCAAAGCCTCTAGT 57.766 39.130 0.00 0.00 37.81 2.57
1944 2092 7.754851 ATGTACATACATACATACACTCGGA 57.245 36.000 6.56 0.00 44.54 4.55
1952 2131 6.403049 ACATACATACACTCGGAATCAACAA 58.597 36.000 0.00 0.00 0.00 2.83
1974 2153 7.208777 ACAATCACAACATGCTACATCAAAAA 58.791 30.769 0.00 0.00 0.00 1.94
2035 2679 2.659016 CAAGAGTCCCGAGCTGCA 59.341 61.111 1.02 0.00 0.00 4.41
2036 2680 1.739562 CAAGAGTCCCGAGCTGCAC 60.740 63.158 1.02 0.00 0.00 4.57
2037 2681 2.948720 AAGAGTCCCGAGCTGCACC 61.949 63.158 1.02 0.00 0.00 5.01
2038 2682 3.386237 GAGTCCCGAGCTGCACCT 61.386 66.667 1.02 0.00 0.00 4.00
2039 2683 3.655810 GAGTCCCGAGCTGCACCTG 62.656 68.421 1.02 0.00 0.00 4.00
2046 2690 4.996434 AGCTGCACCTGCACGGTC 62.996 66.667 1.02 2.66 44.93 4.79
2047 2691 4.996434 GCTGCACCTGCACGGTCT 62.996 66.667 5.02 0.00 44.93 3.85
2048 2692 2.740055 CTGCACCTGCACGGTCTC 60.740 66.667 5.02 2.28 44.93 3.36
2049 2693 4.314440 TGCACCTGCACGGTCTCC 62.314 66.667 5.02 0.00 44.93 3.71
2050 2694 4.314440 GCACCTGCACGGTCTCCA 62.314 66.667 5.02 0.00 44.93 3.86
2051 2695 2.665000 CACCTGCACGGTCTCCAT 59.335 61.111 5.02 0.00 44.93 3.41
2052 2696 1.448540 CACCTGCACGGTCTCCATC 60.449 63.158 5.02 0.00 44.93 3.51
2053 2697 2.187946 CCTGCACGGTCTCCATCC 59.812 66.667 0.00 0.00 0.00 3.51
2054 2698 2.362369 CCTGCACGGTCTCCATCCT 61.362 63.158 0.00 0.00 0.00 3.24
2055 2699 1.142748 CTGCACGGTCTCCATCCTC 59.857 63.158 0.00 0.00 0.00 3.71
2056 2700 1.607801 CTGCACGGTCTCCATCCTCA 61.608 60.000 0.00 0.00 0.00 3.86
2057 2701 1.142748 GCACGGTCTCCATCCTCAG 59.857 63.158 0.00 0.00 0.00 3.35
2058 2702 1.142748 CACGGTCTCCATCCTCAGC 59.857 63.158 0.00 0.00 0.00 4.26
2103 2747 3.409856 GGGACGATGTTGCCGATG 58.590 61.111 0.00 0.00 0.00 3.84
2138 2786 1.202818 ACTGGAACCCAAGAAGAGCAC 60.203 52.381 0.00 0.00 30.80 4.40
2169 2817 0.105453 AGTCACCCGCCCATCTATCT 60.105 55.000 0.00 0.00 0.00 1.98
2179 2827 1.971357 CCCATCTATCTAACGGCCAGT 59.029 52.381 2.24 0.00 0.00 4.00
2182 2830 4.039973 CCCATCTATCTAACGGCCAGTAAA 59.960 45.833 2.24 0.00 0.00 2.01
2203 2852 2.959030 AGCAGCACGGTAGAGATCATAA 59.041 45.455 0.00 0.00 0.00 1.90
2204 2853 3.053455 GCAGCACGGTAGAGATCATAAC 58.947 50.000 0.00 0.00 0.00 1.89
2206 2855 4.294232 CAGCACGGTAGAGATCATAACAG 58.706 47.826 0.00 0.00 0.00 3.16
2209 2858 4.793353 GCACGGTAGAGATCATAACAGACC 60.793 50.000 0.00 0.00 0.00 3.85
2211 2860 3.889538 CGGTAGAGATCATAACAGACCCA 59.110 47.826 0.00 0.00 0.00 4.51
2212 2861 4.261656 CGGTAGAGATCATAACAGACCCAC 60.262 50.000 0.00 0.00 0.00 4.61
2213 2862 4.039366 GGTAGAGATCATAACAGACCCACC 59.961 50.000 0.00 0.00 0.00 4.61
2214 2863 3.041946 AGAGATCATAACAGACCCACCC 58.958 50.000 0.00 0.00 0.00 4.61
2215 2864 2.771943 GAGATCATAACAGACCCACCCA 59.228 50.000 0.00 0.00 0.00 4.51
2216 2865 3.189606 AGATCATAACAGACCCACCCAA 58.810 45.455 0.00 0.00 0.00 4.12
2217 2866 2.871096 TCATAACAGACCCACCCAAC 57.129 50.000 0.00 0.00 0.00 3.77
2218 2867 1.002659 TCATAACAGACCCACCCAACG 59.997 52.381 0.00 0.00 0.00 4.10
2219 2868 0.326927 ATAACAGACCCACCCAACGG 59.673 55.000 0.00 0.00 0.00 4.44
2220 2869 2.400269 TAACAGACCCACCCAACGGC 62.400 60.000 0.00 0.00 0.00 5.68
2226 2875 4.636435 CCACCCAACGGCCGAAGT 62.636 66.667 35.90 19.66 0.00 3.01
2227 2876 3.047877 CACCCAACGGCCGAAGTC 61.048 66.667 35.90 0.00 0.00 3.01
2228 2877 3.552384 ACCCAACGGCCGAAGTCA 61.552 61.111 35.90 0.00 0.00 3.41
2229 2878 3.047877 CCCAACGGCCGAAGTCAC 61.048 66.667 35.90 0.00 0.00 3.67
2230 2879 3.047877 CCAACGGCCGAAGTCACC 61.048 66.667 35.90 0.00 0.00 4.02
2231 2880 3.047877 CAACGGCCGAAGTCACCC 61.048 66.667 35.90 0.00 0.00 4.61
2232 2881 4.675029 AACGGCCGAAGTCACCCG 62.675 66.667 35.90 0.02 45.80 5.28
2235 2884 4.778143 GGCCGAAGTCACCCGCAT 62.778 66.667 0.00 0.00 0.00 4.73
2326 2981 1.063811 GACTACGTCTAGCGGTGCC 59.936 63.158 0.00 0.00 46.52 5.01
2333 2990 0.246635 GTCTAGCGGTGCCTCTGAAA 59.753 55.000 0.00 0.00 0.00 2.69
2352 3009 5.147032 TGAAATTTTTGTCCCTGGTCTGAT 58.853 37.500 0.00 0.00 0.00 2.90
2486 3143 9.708092 TTTGCAATCAACTGATAAATGAAATGA 57.292 25.926 0.00 0.00 33.73 2.57
2492 3149 8.750515 TCAACTGATAAATGAAATGATGCCTA 57.249 30.769 0.00 0.00 0.00 3.93
2502 3159 4.263462 TGAAATGATGCCTAGGTTGTGACT 60.263 41.667 11.31 0.00 0.00 3.41
2571 5413 3.572255 ACATGGTGTGTTCGCCTTTTTAT 59.428 39.130 0.00 0.00 43.94 1.40
2572 5414 4.038642 ACATGGTGTGTTCGCCTTTTTATT 59.961 37.500 0.00 0.00 43.94 1.40
2573 5415 4.657436 TGGTGTGTTCGCCTTTTTATTT 57.343 36.364 0.00 0.00 43.94 1.40
2574 5416 5.012328 TGGTGTGTTCGCCTTTTTATTTT 57.988 34.783 0.00 0.00 43.94 1.82
2575 5417 6.145338 TGGTGTGTTCGCCTTTTTATTTTA 57.855 33.333 0.00 0.00 43.94 1.52
2576 5418 6.750148 TGGTGTGTTCGCCTTTTTATTTTAT 58.250 32.000 0.00 0.00 43.94 1.40
2577 5419 7.883217 TGGTGTGTTCGCCTTTTTATTTTATA 58.117 30.769 0.00 0.00 43.94 0.98
2578 5420 8.024285 TGGTGTGTTCGCCTTTTTATTTTATAG 58.976 33.333 0.00 0.00 43.94 1.31
2579 5421 7.008901 GGTGTGTTCGCCTTTTTATTTTATAGC 59.991 37.037 0.00 0.00 40.73 2.97
2580 5422 7.008901 GTGTGTTCGCCTTTTTATTTTATAGCC 59.991 37.037 0.00 0.00 0.00 3.93
2581 5423 6.474427 GTGTTCGCCTTTTTATTTTATAGCCC 59.526 38.462 0.00 0.00 0.00 5.19
2582 5424 5.427036 TCGCCTTTTTATTTTATAGCCCG 57.573 39.130 0.00 0.00 0.00 6.13
2583 5425 4.883006 TCGCCTTTTTATTTTATAGCCCGT 59.117 37.500 0.00 0.00 0.00 5.28
2584 5426 5.357596 TCGCCTTTTTATTTTATAGCCCGTT 59.642 36.000 0.00 0.00 0.00 4.44
2585 5427 6.037726 CGCCTTTTTATTTTATAGCCCGTTT 58.962 36.000 0.00 0.00 0.00 3.60
2769 5635 6.579666 AAATCTGCAACAGAATAAGCTTGA 57.420 33.333 9.86 0.00 44.04 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.458573 TGGTCAACAGTTTTTCTATACACATT 57.541 30.769 0.00 0.00 0.00 2.71
2 3 7.521423 GCATGGTCAACAGTTTTTCTATACACA 60.521 37.037 0.00 0.00 0.00 3.72
8 9 6.183360 ACAATGCATGGTCAACAGTTTTTCTA 60.183 34.615 0.00 0.00 0.00 2.10
9 10 4.942761 ATGCATGGTCAACAGTTTTTCT 57.057 36.364 0.00 0.00 0.00 2.52
10 11 4.810491 ACAATGCATGGTCAACAGTTTTTC 59.190 37.500 0.00 0.00 0.00 2.29
11 12 4.768583 ACAATGCATGGTCAACAGTTTTT 58.231 34.783 0.00 0.00 0.00 1.94
12 13 4.405116 ACAATGCATGGTCAACAGTTTT 57.595 36.364 0.00 0.00 0.00 2.43
13 14 4.405116 AACAATGCATGGTCAACAGTTT 57.595 36.364 7.31 0.00 0.00 2.66
14 15 4.405116 AAACAATGCATGGTCAACAGTT 57.595 36.364 7.31 0.00 0.00 3.16
15 16 5.528043 TTAAACAATGCATGGTCAACAGT 57.472 34.783 7.31 0.00 0.00 3.55
16 17 8.597227 CATAATTAAACAATGCATGGTCAACAG 58.403 33.333 7.31 0.00 0.00 3.16
17 18 8.309656 TCATAATTAAACAATGCATGGTCAACA 58.690 29.630 7.31 0.00 0.00 3.33
18 19 8.700722 TCATAATTAAACAATGCATGGTCAAC 57.299 30.769 7.31 0.00 0.00 3.18
73 74 9.322773 TGTTCAATATTTTGTTCAAATGCTTGA 57.677 25.926 0.00 6.03 39.87 3.02
74 75 9.588774 CTGTTCAATATTTTGTTCAAATGCTTG 57.411 29.630 0.00 4.19 35.71 4.01
75 76 9.328845 ACTGTTCAATATTTTGTTCAAATGCTT 57.671 25.926 0.00 0.00 35.71 3.91
76 77 8.891671 ACTGTTCAATATTTTGTTCAAATGCT 57.108 26.923 0.00 0.00 35.71 3.79
142 143 9.528489 ACATGGTTAACTTTTTCCTATACACAT 57.472 29.630 5.42 0.00 0.00 3.21
143 144 8.927675 ACATGGTTAACTTTTTCCTATACACA 57.072 30.769 5.42 0.00 0.00 3.72
144 145 9.227777 AGACATGGTTAACTTTTTCCTATACAC 57.772 33.333 5.42 0.00 0.00 2.90
145 146 9.802039 AAGACATGGTTAACTTTTTCCTATACA 57.198 29.630 5.42 0.00 0.00 2.29
186 187 9.316730 GCTTGATCAATATTTTTCTAAATGCCA 57.683 29.630 8.96 0.00 35.61 4.92
187 188 9.316730 TGCTTGATCAATATTTTTCTAAATGCC 57.683 29.630 8.96 0.00 35.61 4.40
201 202 8.817100 CGTACTTTCTTACATGCTTGATCAATA 58.183 33.333 8.96 1.67 0.00 1.90
202 203 7.334421 ACGTACTTTCTTACATGCTTGATCAAT 59.666 33.333 8.96 0.00 0.00 2.57
203 204 6.649141 ACGTACTTTCTTACATGCTTGATCAA 59.351 34.615 8.12 8.12 0.00 2.57
204 205 6.163476 ACGTACTTTCTTACATGCTTGATCA 58.837 36.000 6.60 0.00 0.00 2.92
205 206 6.237861 GGACGTACTTTCTTACATGCTTGATC 60.238 42.308 6.60 0.00 0.00 2.92
206 207 5.581085 GGACGTACTTTCTTACATGCTTGAT 59.419 40.000 6.60 0.00 0.00 2.57
207 208 4.927425 GGACGTACTTTCTTACATGCTTGA 59.073 41.667 6.60 0.00 0.00 3.02
208 209 4.201589 CGGACGTACTTTCTTACATGCTTG 60.202 45.833 0.00 0.00 0.00 4.01
209 210 3.924686 CGGACGTACTTTCTTACATGCTT 59.075 43.478 0.00 0.00 0.00 3.91
210 211 3.508762 CGGACGTACTTTCTTACATGCT 58.491 45.455 0.00 0.00 0.00 3.79
211 212 2.601763 CCGGACGTACTTTCTTACATGC 59.398 50.000 0.00 0.00 0.00 4.06
212 213 3.841643 ACCGGACGTACTTTCTTACATG 58.158 45.455 9.46 0.00 0.00 3.21
213 214 3.507233 TGACCGGACGTACTTTCTTACAT 59.493 43.478 9.46 0.00 0.00 2.29
214 215 2.884012 TGACCGGACGTACTTTCTTACA 59.116 45.455 9.46 0.00 0.00 2.41
215 216 3.237628 GTGACCGGACGTACTTTCTTAC 58.762 50.000 9.46 0.00 0.00 2.34
216 217 2.095768 CGTGACCGGACGTACTTTCTTA 60.096 50.000 9.46 0.00 34.56 2.10
217 218 1.335324 CGTGACCGGACGTACTTTCTT 60.335 52.381 9.46 0.00 34.56 2.52
218 219 0.239347 CGTGACCGGACGTACTTTCT 59.761 55.000 9.46 0.00 34.56 2.52
219 220 1.339946 GCGTGACCGGACGTACTTTC 61.340 60.000 9.46 0.00 41.54 2.62
220 221 1.372128 GCGTGACCGGACGTACTTT 60.372 57.895 9.46 0.00 41.54 2.66
221 222 2.256461 GCGTGACCGGACGTACTT 59.744 61.111 9.46 0.00 41.54 2.24
222 223 3.741476 GGCGTGACCGGACGTACT 61.741 66.667 9.46 0.00 41.54 2.73
223 224 4.041917 TGGCGTGACCGGACGTAC 62.042 66.667 9.46 7.01 43.94 3.67
224 225 4.041917 GTGGCGTGACCGGACGTA 62.042 66.667 9.46 0.00 43.94 3.57
227 228 3.986006 TCAGTGGCGTGACCGGAC 61.986 66.667 9.46 1.07 43.94 4.79
228 229 3.986006 GTCAGTGGCGTGACCGGA 61.986 66.667 9.46 0.00 43.94 5.14
232 233 0.801067 GTATCGGTCAGTGGCGTGAC 60.801 60.000 10.52 10.52 45.30 3.67
233 234 1.245376 TGTATCGGTCAGTGGCGTGA 61.245 55.000 0.00 0.00 0.00 4.35
234 235 0.179111 ATGTATCGGTCAGTGGCGTG 60.179 55.000 0.00 0.00 0.00 5.34
235 236 0.179111 CATGTATCGGTCAGTGGCGT 60.179 55.000 0.00 0.00 0.00 5.68
236 237 0.102300 TCATGTATCGGTCAGTGGCG 59.898 55.000 0.00 0.00 0.00 5.69
237 238 2.408050 GATCATGTATCGGTCAGTGGC 58.592 52.381 0.00 0.00 0.00 5.01
247 248 4.081972 ACCCATCTAGTGCGATCATGTATC 60.082 45.833 0.00 0.00 0.00 2.24
248 249 3.834813 ACCCATCTAGTGCGATCATGTAT 59.165 43.478 0.00 0.00 0.00 2.29
249 250 3.005791 CACCCATCTAGTGCGATCATGTA 59.994 47.826 0.00 0.00 0.00 2.29
250 251 2.042464 ACCCATCTAGTGCGATCATGT 58.958 47.619 0.00 0.00 0.00 3.21
251 252 2.410939 CACCCATCTAGTGCGATCATG 58.589 52.381 0.00 0.00 0.00 3.07
252 253 2.827800 CACCCATCTAGTGCGATCAT 57.172 50.000 0.00 0.00 0.00 2.45
259 260 2.586079 CGCGGCACCCATCTAGTG 60.586 66.667 0.00 0.00 38.30 2.74
260 261 2.758327 TCGCGGCACCCATCTAGT 60.758 61.111 6.13 0.00 0.00 2.57
261 262 2.279517 GTCGCGGCACCCATCTAG 60.280 66.667 5.47 0.00 0.00 2.43
262 263 3.845259 GGTCGCGGCACCCATCTA 61.845 66.667 14.93 0.00 0.00 1.98
280 281 1.632046 AAACCTACCGCATGCGTTCG 61.632 55.000 35.55 23.90 37.81 3.95
281 282 1.361793 TAAACCTACCGCATGCGTTC 58.638 50.000 35.55 0.00 37.81 3.95
282 283 1.668751 CATAAACCTACCGCATGCGTT 59.331 47.619 35.55 26.91 37.81 4.84
283 284 1.295792 CATAAACCTACCGCATGCGT 58.704 50.000 35.55 25.53 37.81 5.24
284 285 0.586319 CCATAAACCTACCGCATGCG 59.414 55.000 32.60 32.60 39.44 4.73
285 286 0.951558 CCCATAAACCTACCGCATGC 59.048 55.000 7.91 7.91 0.00 4.06
286 287 2.218603 GACCCATAAACCTACCGCATG 58.781 52.381 0.00 0.00 0.00 4.06
287 288 1.202604 CGACCCATAAACCTACCGCAT 60.203 52.381 0.00 0.00 0.00 4.73
288 289 0.176219 CGACCCATAAACCTACCGCA 59.824 55.000 0.00 0.00 0.00 5.69
289 290 0.531311 CCGACCCATAAACCTACCGC 60.531 60.000 0.00 0.00 0.00 5.68
290 291 0.531311 GCCGACCCATAAACCTACCG 60.531 60.000 0.00 0.00 0.00 4.02
291 292 0.531311 CGCCGACCCATAAACCTACC 60.531 60.000 0.00 0.00 0.00 3.18
292 293 0.176449 ACGCCGACCCATAAACCTAC 59.824 55.000 0.00 0.00 0.00 3.18
293 294 0.461135 GACGCCGACCCATAAACCTA 59.539 55.000 0.00 0.00 0.00 3.08
294 295 1.219935 GACGCCGACCCATAAACCT 59.780 57.895 0.00 0.00 0.00 3.50
295 296 2.169146 CGACGCCGACCCATAAACC 61.169 63.158 0.00 0.00 38.22 3.27
296 297 2.169146 CCGACGCCGACCCATAAAC 61.169 63.158 0.00 0.00 38.22 2.01
297 298 2.184836 CCGACGCCGACCCATAAA 59.815 61.111 0.00 0.00 38.22 1.40
298 299 2.755064 TCCGACGCCGACCCATAA 60.755 61.111 0.00 0.00 38.22 1.90
299 300 2.971095 ATCTCCGACGCCGACCCATA 62.971 60.000 0.00 0.00 38.22 2.74
302 303 4.570663 CATCTCCGACGCCGACCC 62.571 72.222 0.00 0.00 38.22 4.46
307 308 4.593864 GAGGGCATCTCCGACGCC 62.594 72.222 0.00 0.00 40.49 5.68
308 309 1.735376 TTAGAGGGCATCTCCGACGC 61.735 60.000 4.30 0.00 43.44 5.19
309 310 0.312416 CTTAGAGGGCATCTCCGACG 59.688 60.000 4.30 0.00 43.44 5.12
310 311 1.693627 TCTTAGAGGGCATCTCCGAC 58.306 55.000 4.30 0.00 43.44 4.79
311 312 2.520069 GATCTTAGAGGGCATCTCCGA 58.480 52.381 4.30 3.72 43.44 4.55
312 313 1.548269 GGATCTTAGAGGGCATCTCCG 59.452 57.143 4.30 0.00 43.44 4.63
313 314 1.905894 GGGATCTTAGAGGGCATCTCC 59.094 57.143 4.30 0.00 43.44 3.71
314 315 1.548269 CGGGATCTTAGAGGGCATCTC 59.452 57.143 4.30 0.00 42.75 2.75
315 316 1.148027 TCGGGATCTTAGAGGGCATCT 59.852 52.381 6.96 6.96 42.47 2.90
316 317 1.548269 CTCGGGATCTTAGAGGGCATC 59.452 57.143 0.00 0.00 0.00 3.91
317 318 1.148027 TCTCGGGATCTTAGAGGGCAT 59.852 52.381 10.91 0.00 33.16 4.40
318 319 0.556258 TCTCGGGATCTTAGAGGGCA 59.444 55.000 10.91 0.00 33.16 5.36
319 320 1.253100 CTCTCGGGATCTTAGAGGGC 58.747 60.000 10.06 0.00 34.40 5.19
320 321 1.253100 GCTCTCGGGATCTTAGAGGG 58.747 60.000 16.19 12.28 37.75 4.30
321 322 0.878416 CGCTCTCGGGATCTTAGAGG 59.122 60.000 16.19 8.22 37.75 3.69
322 323 1.804151 CTCGCTCTCGGGATCTTAGAG 59.196 57.143 12.40 12.40 38.83 2.43
323 324 1.416772 TCTCGCTCTCGGGATCTTAGA 59.583 52.381 0.00 0.00 40.86 2.10
324 325 1.804151 CTCTCGCTCTCGGGATCTTAG 59.196 57.143 0.00 0.00 45.26 2.18
325 326 1.416772 TCTCTCGCTCTCGGGATCTTA 59.583 52.381 0.00 0.00 45.26 2.10
326 327 0.181587 TCTCTCGCTCTCGGGATCTT 59.818 55.000 0.00 0.00 45.26 2.40
327 328 0.250295 CTCTCTCGCTCTCGGGATCT 60.250 60.000 0.00 0.00 45.26 2.75
328 329 0.534203 ACTCTCTCGCTCTCGGGATC 60.534 60.000 0.00 0.00 45.26 3.36
329 330 0.106918 AACTCTCTCGCTCTCGGGAT 60.107 55.000 0.00 0.00 45.26 3.85
330 331 0.322636 AAACTCTCTCGCTCTCGGGA 60.323 55.000 0.00 0.00 44.02 5.14
331 332 0.528470 AAAACTCTCTCGCTCTCGGG 59.472 55.000 0.00 0.00 37.58 5.14
332 333 2.355717 AAAAACTCTCTCGCTCTCGG 57.644 50.000 0.00 0.00 36.13 4.63
354 355 9.313118 GCTCTCCTTTCACAAAAAGATTAAAAA 57.687 29.630 0.00 0.00 0.00 1.94
355 356 7.647715 CGCTCTCCTTTCACAAAAAGATTAAAA 59.352 33.333 0.00 0.00 0.00 1.52
356 357 7.012894 TCGCTCTCCTTTCACAAAAAGATTAAA 59.987 33.333 0.00 0.00 0.00 1.52
357 358 6.485313 TCGCTCTCCTTTCACAAAAAGATTAA 59.515 34.615 0.00 0.00 0.00 1.40
358 359 5.995282 TCGCTCTCCTTTCACAAAAAGATTA 59.005 36.000 0.00 0.00 0.00 1.75
359 360 4.821805 TCGCTCTCCTTTCACAAAAAGATT 59.178 37.500 0.00 0.00 0.00 2.40
360 361 4.389374 TCGCTCTCCTTTCACAAAAAGAT 58.611 39.130 0.00 0.00 0.00 2.40
361 362 3.804036 TCGCTCTCCTTTCACAAAAAGA 58.196 40.909 0.00 0.00 0.00 2.52
362 363 3.058639 CCTCGCTCTCCTTTCACAAAAAG 60.059 47.826 0.00 0.00 0.00 2.27
363 364 2.878406 CCTCGCTCTCCTTTCACAAAAA 59.122 45.455 0.00 0.00 0.00 1.94
364 365 2.494059 CCTCGCTCTCCTTTCACAAAA 58.506 47.619 0.00 0.00 0.00 2.44
365 366 1.270839 CCCTCGCTCTCCTTTCACAAA 60.271 52.381 0.00 0.00 0.00 2.83
366 367 0.321671 CCCTCGCTCTCCTTTCACAA 59.678 55.000 0.00 0.00 0.00 3.33
367 368 1.544825 CCCCTCGCTCTCCTTTCACA 61.545 60.000 0.00 0.00 0.00 3.58
368 369 1.219393 CCCCTCGCTCTCCTTTCAC 59.781 63.158 0.00 0.00 0.00 3.18
369 370 0.972983 CTCCCCTCGCTCTCCTTTCA 60.973 60.000 0.00 0.00 0.00 2.69
370 371 0.684805 TCTCCCCTCGCTCTCCTTTC 60.685 60.000 0.00 0.00 0.00 2.62
371 372 0.686112 CTCTCCCCTCGCTCTCCTTT 60.686 60.000 0.00 0.00 0.00 3.11
372 373 1.076339 CTCTCCCCTCGCTCTCCTT 60.076 63.158 0.00 0.00 0.00 3.36
373 374 1.869824 AACTCTCCCCTCGCTCTCCT 61.870 60.000 0.00 0.00 0.00 3.69
374 375 0.973496 AAACTCTCCCCTCGCTCTCC 60.973 60.000 0.00 0.00 0.00 3.71
375 376 0.174617 CAAACTCTCCCCTCGCTCTC 59.825 60.000 0.00 0.00 0.00 3.20
376 377 1.261238 CCAAACTCTCCCCTCGCTCT 61.261 60.000 0.00 0.00 0.00 4.09
377 378 1.219393 CCAAACTCTCCCCTCGCTC 59.781 63.158 0.00 0.00 0.00 5.03
378 379 2.960688 GCCAAACTCTCCCCTCGCT 61.961 63.158 0.00 0.00 0.00 4.93
379 380 1.614241 TAGCCAAACTCTCCCCTCGC 61.614 60.000 0.00 0.00 0.00 5.03
380 381 0.902531 TTAGCCAAACTCTCCCCTCG 59.097 55.000 0.00 0.00 0.00 4.63
381 382 1.210722 CCTTAGCCAAACTCTCCCCTC 59.789 57.143 0.00 0.00 0.00 4.30
382 383 1.290134 CCTTAGCCAAACTCTCCCCT 58.710 55.000 0.00 0.00 0.00 4.79
383 384 0.256177 CCCTTAGCCAAACTCTCCCC 59.744 60.000 0.00 0.00 0.00 4.81
384 385 1.065345 GTCCCTTAGCCAAACTCTCCC 60.065 57.143 0.00 0.00 0.00 4.30
385 386 1.405661 CGTCCCTTAGCCAAACTCTCC 60.406 57.143 0.00 0.00 0.00 3.71
386 387 2.007547 GCGTCCCTTAGCCAAACTCTC 61.008 57.143 0.00 0.00 0.00 3.20
387 388 0.036294 GCGTCCCTTAGCCAAACTCT 60.036 55.000 0.00 0.00 0.00 3.24
388 389 0.321298 TGCGTCCCTTAGCCAAACTC 60.321 55.000 0.00 0.00 0.00 3.01
389 390 0.109723 TTGCGTCCCTTAGCCAAACT 59.890 50.000 0.00 0.00 0.00 2.66
390 391 0.955905 TTTGCGTCCCTTAGCCAAAC 59.044 50.000 0.00 0.00 0.00 2.93
391 392 0.955905 GTTTGCGTCCCTTAGCCAAA 59.044 50.000 0.00 0.00 0.00 3.28
392 393 0.109723 AGTTTGCGTCCCTTAGCCAA 59.890 50.000 0.00 0.00 0.00 4.52
393 394 0.321298 GAGTTTGCGTCCCTTAGCCA 60.321 55.000 0.00 0.00 0.00 4.75
394 395 1.025113 GGAGTTTGCGTCCCTTAGCC 61.025 60.000 0.00 0.00 0.00 3.93
395 396 0.321298 TGGAGTTTGCGTCCCTTAGC 60.321 55.000 0.00 0.00 32.49 3.09
396 397 2.093447 AGATGGAGTTTGCGTCCCTTAG 60.093 50.000 0.00 0.00 32.49 2.18
397 398 1.906574 AGATGGAGTTTGCGTCCCTTA 59.093 47.619 0.00 0.00 32.49 2.69
398 399 0.693049 AGATGGAGTTTGCGTCCCTT 59.307 50.000 0.00 0.00 32.49 3.95
399 400 1.207329 GTAGATGGAGTTTGCGTCCCT 59.793 52.381 0.00 0.00 32.49 4.20
400 401 1.207329 AGTAGATGGAGTTTGCGTCCC 59.793 52.381 0.00 0.00 32.49 4.46
401 402 2.166664 AGAGTAGATGGAGTTTGCGTCC 59.833 50.000 0.00 0.00 34.31 4.79
402 403 3.182967 CAGAGTAGATGGAGTTTGCGTC 58.817 50.000 0.00 0.00 0.00 5.19
403 404 2.093973 CCAGAGTAGATGGAGTTTGCGT 60.094 50.000 0.00 0.00 40.51 5.24
404 405 2.093973 ACCAGAGTAGATGGAGTTTGCG 60.094 50.000 0.00 0.00 40.51 4.85
405 406 3.055819 TCACCAGAGTAGATGGAGTTTGC 60.056 47.826 0.00 0.00 40.51 3.68
406 407 4.499183 GTCACCAGAGTAGATGGAGTTTG 58.501 47.826 0.00 0.00 40.51 2.93
407 408 3.193691 CGTCACCAGAGTAGATGGAGTTT 59.806 47.826 0.00 0.00 40.51 2.66
408 409 2.755655 CGTCACCAGAGTAGATGGAGTT 59.244 50.000 0.00 0.00 40.51 3.01
409 410 2.370349 CGTCACCAGAGTAGATGGAGT 58.630 52.381 0.00 0.00 40.51 3.85
410 411 1.066303 GCGTCACCAGAGTAGATGGAG 59.934 57.143 0.00 0.00 40.51 3.86
411 412 1.103803 GCGTCACCAGAGTAGATGGA 58.896 55.000 0.00 0.00 40.51 3.41
412 413 0.817654 TGCGTCACCAGAGTAGATGG 59.182 55.000 0.00 0.00 43.87 3.51
413 414 1.914634 GTGCGTCACCAGAGTAGATG 58.085 55.000 0.00 0.00 0.00 2.90
424 425 1.805945 GATGAGTCCGGTGCGTCAC 60.806 63.158 0.00 1.92 0.00 3.67
425 426 1.604147 ATGATGAGTCCGGTGCGTCA 61.604 55.000 14.75 14.75 32.69 4.35
426 427 1.141881 ATGATGAGTCCGGTGCGTC 59.858 57.895 0.00 3.82 0.00 5.19
427 428 1.153568 CATGATGAGTCCGGTGCGT 60.154 57.895 0.00 0.00 0.00 5.24
428 429 1.148157 GACATGATGAGTCCGGTGCG 61.148 60.000 0.00 0.00 0.00 5.34
429 430 0.811616 GGACATGATGAGTCCGGTGC 60.812 60.000 0.00 0.00 45.35 5.01
430 431 3.369381 GGACATGATGAGTCCGGTG 57.631 57.895 0.00 0.00 45.35 4.94
435 436 3.411446 TGTTGTTGGGACATGATGAGTC 58.589 45.455 0.00 0.00 39.30 3.36
436 437 3.507162 TGTTGTTGGGACATGATGAGT 57.493 42.857 0.00 0.00 39.30 3.41
437 438 4.279169 AGTTTGTTGTTGGGACATGATGAG 59.721 41.667 0.00 0.00 39.30 2.90
438 439 4.214310 AGTTTGTTGTTGGGACATGATGA 58.786 39.130 0.00 0.00 39.30 2.92
439 440 4.589216 AGTTTGTTGTTGGGACATGATG 57.411 40.909 0.00 0.00 39.30 3.07
440 441 4.202243 CCAAGTTTGTTGTTGGGACATGAT 60.202 41.667 0.00 0.00 39.76 2.45
441 442 3.131933 CCAAGTTTGTTGTTGGGACATGA 59.868 43.478 0.00 0.00 39.76 3.07
442 443 3.456280 CCAAGTTTGTTGTTGGGACATG 58.544 45.455 0.00 0.00 39.76 3.21
443 444 2.158971 GCCAAGTTTGTTGTTGGGACAT 60.159 45.455 3.41 0.00 43.11 3.06
444 445 1.205893 GCCAAGTTTGTTGTTGGGACA 59.794 47.619 3.41 0.00 43.11 4.02
445 446 1.205893 TGCCAAGTTTGTTGTTGGGAC 59.794 47.619 3.41 0.00 43.11 4.46
446 447 1.480137 CTGCCAAGTTTGTTGTTGGGA 59.520 47.619 3.41 0.00 43.11 4.37
447 448 1.206849 ACTGCCAAGTTTGTTGTTGGG 59.793 47.619 3.41 0.00 43.11 4.12
448 449 2.270047 CACTGCCAAGTTTGTTGTTGG 58.730 47.619 0.00 0.00 45.30 3.77
449 450 2.958213 ACACTGCCAAGTTTGTTGTTG 58.042 42.857 0.00 0.00 32.98 3.33
450 451 3.676291 AACACTGCCAAGTTTGTTGTT 57.324 38.095 0.00 0.00 32.98 2.83
451 452 4.792521 TTAACACTGCCAAGTTTGTTGT 57.207 36.364 1.04 0.00 32.98 3.32
452 453 6.473397 TTTTTAACACTGCCAAGTTTGTTG 57.527 33.333 1.04 0.00 32.98 3.33
485 486 2.863704 GCTTCGCAGCTGGACAATTTTT 60.864 45.455 17.12 0.00 43.51 1.94
486 487 1.336240 GCTTCGCAGCTGGACAATTTT 60.336 47.619 17.12 0.00 43.51 1.82
487 488 0.242017 GCTTCGCAGCTGGACAATTT 59.758 50.000 17.12 0.00 43.51 1.82
488 489 1.878775 GCTTCGCAGCTGGACAATT 59.121 52.632 17.12 0.00 43.51 2.32
489 490 3.583383 GCTTCGCAGCTGGACAAT 58.417 55.556 17.12 0.00 43.51 2.71
498 499 0.318445 AGCTTTGCTTTGCTTCGCAG 60.318 50.000 0.00 0.00 40.61 5.18
499 500 0.318107 GAGCTTTGCTTTGCTTCGCA 60.318 50.000 0.00 0.00 39.88 5.10
500 501 1.005804 GGAGCTTTGCTTTGCTTCGC 61.006 55.000 0.00 0.00 39.88 4.70
501 502 0.387750 GGGAGCTTTGCTTTGCTTCG 60.388 55.000 0.00 0.00 39.88 3.79
502 503 0.964700 AGGGAGCTTTGCTTTGCTTC 59.035 50.000 0.00 0.00 39.88 3.86
503 504 0.964700 GAGGGAGCTTTGCTTTGCTT 59.035 50.000 0.00 0.00 39.88 3.91
504 505 1.239968 CGAGGGAGCTTTGCTTTGCT 61.240 55.000 0.00 0.00 39.88 3.91
505 506 1.211190 CGAGGGAGCTTTGCTTTGC 59.789 57.895 0.00 0.00 39.88 3.68
506 507 0.954452 AACGAGGGAGCTTTGCTTTG 59.046 50.000 0.00 0.00 39.88 2.77
507 508 0.954452 CAACGAGGGAGCTTTGCTTT 59.046 50.000 0.00 0.00 39.88 3.51
508 509 0.179018 ACAACGAGGGAGCTTTGCTT 60.179 50.000 0.00 0.00 39.88 3.91
509 510 0.603975 GACAACGAGGGAGCTTTGCT 60.604 55.000 0.00 0.00 43.88 3.91
510 511 1.869690 GACAACGAGGGAGCTTTGC 59.130 57.895 0.00 0.00 0.00 3.68
511 512 1.901650 GCGACAACGAGGGAGCTTTG 61.902 60.000 0.00 0.00 42.66 2.77
512 513 1.668151 GCGACAACGAGGGAGCTTT 60.668 57.895 0.00 0.00 42.66 3.51
513 514 2.048127 GCGACAACGAGGGAGCTT 60.048 61.111 0.00 0.00 42.66 3.74
514 515 4.421479 CGCGACAACGAGGGAGCT 62.421 66.667 0.00 0.00 42.66 4.09
515 516 4.415332 TCGCGACAACGAGGGAGC 62.415 66.667 3.71 0.00 42.66 4.70
516 517 2.504244 GTCGCGACAACGAGGGAG 60.504 66.667 33.09 0.00 43.89 4.30
517 518 2.974489 GAGTCGCGACAACGAGGGA 61.974 63.158 37.85 0.00 43.89 4.20
518 519 1.642037 TAGAGTCGCGACAACGAGGG 61.642 60.000 37.85 0.00 43.89 4.30
519 520 0.247735 CTAGAGTCGCGACAACGAGG 60.248 60.000 37.85 19.43 43.89 4.63
520 521 0.443088 ACTAGAGTCGCGACAACGAG 59.557 55.000 37.85 32.38 43.89 4.18
521 522 0.441533 GACTAGAGTCGCGACAACGA 59.558 55.000 37.85 25.12 40.36 3.85
522 523 0.520827 GGACTAGAGTCGCGACAACG 60.521 60.000 37.85 24.60 45.65 4.10
523 524 0.520404 TGGACTAGAGTCGCGACAAC 59.480 55.000 37.85 29.38 45.65 3.32
524 525 0.803117 CTGGACTAGAGTCGCGACAA 59.197 55.000 37.85 22.55 45.65 3.18
525 526 0.321387 ACTGGACTAGAGTCGCGACA 60.321 55.000 37.85 19.02 45.65 4.35
526 527 0.374410 GACTGGACTAGAGTCGCGAC 59.626 60.000 31.30 31.30 45.65 5.19
527 528 0.743701 GGACTGGACTAGAGTCGCGA 60.744 60.000 3.71 3.71 45.65 5.87
528 529 1.025113 TGGACTGGACTAGAGTCGCG 61.025 60.000 0.00 0.00 45.65 5.87
529 530 0.452585 GTGGACTGGACTAGAGTCGC 59.547 60.000 0.00 0.00 45.65 5.19
530 531 1.096416 GGTGGACTGGACTAGAGTCG 58.904 60.000 0.00 0.00 45.65 4.18
531 532 1.096416 CGGTGGACTGGACTAGAGTC 58.904 60.000 0.00 0.75 44.04 3.36
532 533 0.697079 TCGGTGGACTGGACTAGAGT 59.303 55.000 0.00 0.00 0.00 3.24
533 534 2.060050 ATCGGTGGACTGGACTAGAG 57.940 55.000 0.00 0.00 0.00 2.43
534 535 2.508716 ACTATCGGTGGACTGGACTAGA 59.491 50.000 0.00 0.00 0.00 2.43
535 536 2.619177 CACTATCGGTGGACTGGACTAG 59.381 54.545 0.00 0.00 41.90 2.57
536 537 2.651455 CACTATCGGTGGACTGGACTA 58.349 52.381 0.00 0.00 41.90 2.59
537 538 1.475403 CACTATCGGTGGACTGGACT 58.525 55.000 0.00 0.00 41.90 3.85
547 548 5.475564 ACTGCCAATTTTTAACACTATCGGT 59.524 36.000 0.00 0.00 0.00 4.69
548 549 5.799936 CACTGCCAATTTTTAACACTATCGG 59.200 40.000 0.00 0.00 0.00 4.18
549 550 6.378582 ACACTGCCAATTTTTAACACTATCG 58.621 36.000 0.00 0.00 0.00 2.92
550 551 9.855021 ATAACACTGCCAATTTTTAACACTATC 57.145 29.630 0.00 0.00 0.00 2.08
551 552 9.638239 CATAACACTGCCAATTTTTAACACTAT 57.362 29.630 0.00 0.00 0.00 2.12
552 553 8.085296 CCATAACACTGCCAATTTTTAACACTA 58.915 33.333 0.00 0.00 0.00 2.74
553 554 6.928492 CCATAACACTGCCAATTTTTAACACT 59.072 34.615 0.00 0.00 0.00 3.55
554 555 6.347321 GCCATAACACTGCCAATTTTTAACAC 60.347 38.462 0.00 0.00 0.00 3.32
555 556 5.698545 GCCATAACACTGCCAATTTTTAACA 59.301 36.000 0.00 0.00 0.00 2.41
556 557 5.164002 CGCCATAACACTGCCAATTTTTAAC 60.164 40.000 0.00 0.00 0.00 2.01
557 558 4.926238 CGCCATAACACTGCCAATTTTTAA 59.074 37.500 0.00 0.00 0.00 1.52
558 559 4.489810 CGCCATAACACTGCCAATTTTTA 58.510 39.130 0.00 0.00 0.00 1.52
559 560 3.324993 CGCCATAACACTGCCAATTTTT 58.675 40.909 0.00 0.00 0.00 1.94
560 561 2.353605 CCGCCATAACACTGCCAATTTT 60.354 45.455 0.00 0.00 0.00 1.82
561 562 1.204467 CCGCCATAACACTGCCAATTT 59.796 47.619 0.00 0.00 0.00 1.82
562 563 0.817013 CCGCCATAACACTGCCAATT 59.183 50.000 0.00 0.00 0.00 2.32
563 564 0.323360 ACCGCCATAACACTGCCAAT 60.323 50.000 0.00 0.00 0.00 3.16
564 565 0.538516 AACCGCCATAACACTGCCAA 60.539 50.000 0.00 0.00 0.00 4.52
565 566 0.538516 AAACCGCCATAACACTGCCA 60.539 50.000 0.00 0.00 0.00 4.92
566 567 0.170339 GAAACCGCCATAACACTGCC 59.830 55.000 0.00 0.00 0.00 4.85
567 568 0.170339 GGAAACCGCCATAACACTGC 59.830 55.000 0.00 0.00 0.00 4.40
568 569 0.446222 CGGAAACCGCCATAACACTG 59.554 55.000 0.00 0.00 41.17 3.66
569 570 0.675522 CCGGAAACCGCCATAACACT 60.676 55.000 0.00 0.00 46.86 3.55
570 571 1.798087 CCGGAAACCGCCATAACAC 59.202 57.895 0.00 0.00 46.86 3.32
571 572 2.041686 GCCGGAAACCGCCATAACA 61.042 57.895 5.05 0.00 46.86 2.41
572 573 2.795973 GCCGGAAACCGCCATAAC 59.204 61.111 5.05 0.00 46.86 1.89
573 574 2.820479 CGCCGGAAACCGCCATAA 60.820 61.111 5.05 0.00 46.86 1.90
617 625 2.203437 ACGGTTTGGGCTTGGGTC 60.203 61.111 0.00 0.00 0.00 4.46
657 665 0.250901 TGCTTTGTCCTCTTGCTCCC 60.251 55.000 0.00 0.00 0.00 4.30
688 696 1.065928 CTGTCCGTCCGCCTGATAC 59.934 63.158 0.00 0.00 0.00 2.24
749 764 2.070654 CTGGTTTGGTTGGTGCCGAC 62.071 60.000 0.00 0.00 0.00 4.79
750 765 1.826054 CTGGTTTGGTTGGTGCCGA 60.826 57.895 0.00 0.00 0.00 5.54
751 766 1.826054 TCTGGTTTGGTTGGTGCCG 60.826 57.895 0.00 0.00 0.00 5.69
752 767 1.739667 GTCTGGTTTGGTTGGTGCC 59.260 57.895 0.00 0.00 0.00 5.01
753 768 1.040339 TGGTCTGGTTTGGTTGGTGC 61.040 55.000 0.00 0.00 0.00 5.01
754 769 1.340889 CATGGTCTGGTTTGGTTGGTG 59.659 52.381 0.00 0.00 0.00 4.17
755 770 1.063266 ACATGGTCTGGTTTGGTTGGT 60.063 47.619 0.00 0.00 0.00 3.67
773 788 1.227527 CAGAGCACACGGGTTGACA 60.228 57.895 0.00 0.00 0.00 3.58
774 789 2.607892 GCAGAGCACACGGGTTGAC 61.608 63.158 0.00 0.00 0.00 3.18
779 808 1.845809 GAAACAGCAGAGCACACGGG 61.846 60.000 0.00 0.00 0.00 5.28
890 929 4.088634 AGGATGATCATCTCTGGTCTAGC 58.911 47.826 29.85 12.88 37.92 3.42
892 931 6.461577 AGTAGGATGATCATCTCTGGTCTA 57.538 41.667 29.85 19.77 37.92 2.59
911 950 2.268298 GGTGGTGTTGTATGCGAGTAG 58.732 52.381 0.00 0.00 0.00 2.57
944 998 3.751518 TCCCTTGCTAGGTTTTCACTTC 58.248 45.455 13.38 0.00 40.19 3.01
948 1002 2.175931 TGGTTCCCTTGCTAGGTTTTCA 59.824 45.455 13.38 3.84 40.19 2.69
967 1025 1.112113 AGCACGTAGGTAGGATGTGG 58.888 55.000 0.00 0.00 34.89 4.17
1628 1769 1.000486 TCCACCTCCTCCTCCTTCG 60.000 63.158 0.00 0.00 0.00 3.79
1812 1959 2.081462 GGTGAATACACTTTGACCGGG 58.919 52.381 6.32 0.00 45.32 5.73
1813 1960 2.742053 CTGGTGAATACACTTTGACCGG 59.258 50.000 0.00 0.00 45.32 5.28
1814 1961 2.742053 CCTGGTGAATACACTTTGACCG 59.258 50.000 0.00 0.00 45.32 4.79
1831 1978 3.817647 GCTACTGCAAAATCCTATCCTGG 59.182 47.826 0.00 0.00 39.41 4.45
1852 1999 6.586082 CACTAGACTGAAGAAGAAGAAGAAGC 59.414 42.308 0.00 0.00 0.00 3.86
1931 2079 6.533723 GTGATTGTTGATTCCGAGTGTATGTA 59.466 38.462 0.00 0.00 0.00 2.29
1932 2080 5.351465 GTGATTGTTGATTCCGAGTGTATGT 59.649 40.000 0.00 0.00 0.00 2.29
1935 2083 4.888917 TGTGATTGTTGATTCCGAGTGTA 58.111 39.130 0.00 0.00 0.00 2.90
1936 2084 3.738982 TGTGATTGTTGATTCCGAGTGT 58.261 40.909 0.00 0.00 0.00 3.55
1938 2086 4.133820 TGTTGTGATTGTTGATTCCGAGT 58.866 39.130 0.00 0.00 0.00 4.18
1939 2087 4.747540 TGTTGTGATTGTTGATTCCGAG 57.252 40.909 0.00 0.00 0.00 4.63
1940 2088 4.615682 GCATGTTGTGATTGTTGATTCCGA 60.616 41.667 0.00 0.00 0.00 4.55
1941 2089 3.609373 GCATGTTGTGATTGTTGATTCCG 59.391 43.478 0.00 0.00 0.00 4.30
1942 2090 4.813027 AGCATGTTGTGATTGTTGATTCC 58.187 39.130 0.00 0.00 0.00 3.01
1943 2091 6.380995 TGTAGCATGTTGTGATTGTTGATTC 58.619 36.000 0.00 0.00 0.00 2.52
1944 2092 6.330004 TGTAGCATGTTGTGATTGTTGATT 57.670 33.333 0.00 0.00 0.00 2.57
1952 2131 6.864685 CAGTTTTTGATGTAGCATGTTGTGAT 59.135 34.615 0.00 0.00 0.00 3.06
1974 2153 4.863131 GTCTTCGTCGGTTTTATCATCAGT 59.137 41.667 0.00 0.00 0.00 3.41
1986 2165 3.352222 ACGCTCGTCTTCGTCGGT 61.352 61.111 0.00 0.00 37.95 4.69
2016 2660 2.659016 CAGCTCGGGACTCTTGCA 59.341 61.111 0.00 0.00 0.00 4.08
2037 2681 1.142748 GAGGATGGAGACCGTGCAG 59.857 63.158 0.00 0.00 33.12 4.41
2038 2682 1.607801 CTGAGGATGGAGACCGTGCA 61.608 60.000 0.00 0.00 33.12 4.57
2039 2683 1.142748 CTGAGGATGGAGACCGTGC 59.857 63.158 0.00 0.00 0.00 5.34
2040 2684 1.142748 GCTGAGGATGGAGACCGTG 59.857 63.158 0.00 0.00 0.00 4.94
2041 2685 2.418910 CGCTGAGGATGGAGACCGT 61.419 63.158 0.00 0.00 0.00 4.83
2042 2686 2.415010 CGCTGAGGATGGAGACCG 59.585 66.667 0.00 0.00 0.00 4.79
2043 2687 2.107953 GCGCTGAGGATGGAGACC 59.892 66.667 0.00 0.00 0.00 3.85
2044 2688 2.279120 CGCGCTGAGGATGGAGAC 60.279 66.667 5.56 0.00 0.00 3.36
2045 2689 3.531207 CCGCGCTGAGGATGGAGA 61.531 66.667 5.56 0.00 0.00 3.71
2113 2757 0.476771 TTCTTGGGTTCCAGTCCACC 59.523 55.000 0.00 0.00 33.81 4.61
2114 2758 1.420138 TCTTCTTGGGTTCCAGTCCAC 59.580 52.381 0.00 0.00 33.81 4.02
2115 2759 1.699634 CTCTTCTTGGGTTCCAGTCCA 59.300 52.381 0.00 0.00 33.81 4.02
2117 2761 1.072331 TGCTCTTCTTGGGTTCCAGTC 59.928 52.381 0.00 0.00 33.81 3.51
2118 2762 1.140312 TGCTCTTCTTGGGTTCCAGT 58.860 50.000 0.00 0.00 33.81 4.00
2119 2763 1.528129 GTGCTCTTCTTGGGTTCCAG 58.472 55.000 0.00 0.00 33.81 3.86
2120 2764 0.110486 GGTGCTCTTCTTGGGTTCCA 59.890 55.000 0.00 0.00 0.00 3.53
2122 2766 0.110486 TGGGTGCTCTTCTTGGGTTC 59.890 55.000 0.00 0.00 0.00 3.62
2138 2786 2.639286 GTGACTTGCGTTGCTGGG 59.361 61.111 0.00 0.00 0.00 4.45
2169 2817 0.035598 TGCTGCTTTACTGGCCGTTA 59.964 50.000 0.00 0.00 0.00 3.18
2179 2827 2.758423 TGATCTCTACCGTGCTGCTTTA 59.242 45.455 0.00 0.00 0.00 1.85
2182 2830 1.407936 ATGATCTCTACCGTGCTGCT 58.592 50.000 0.00 0.00 0.00 4.24
2203 2852 4.265056 GCCGTTGGGTGGGTCTGT 62.265 66.667 0.00 0.00 34.97 3.41
2209 2858 4.636435 ACTTCGGCCGTTGGGTGG 62.636 66.667 27.15 10.60 34.97 4.61
2211 2860 3.552384 TGACTTCGGCCGTTGGGT 61.552 61.111 27.15 18.57 34.97 4.51
2212 2861 3.047877 GTGACTTCGGCCGTTGGG 61.048 66.667 27.15 15.49 0.00 4.12
2213 2862 3.047877 GGTGACTTCGGCCGTTGG 61.048 66.667 27.15 18.00 0.00 3.77
2214 2863 3.047877 GGGTGACTTCGGCCGTTG 61.048 66.667 27.15 20.67 0.00 4.10
2215 2864 4.675029 CGGGTGACTTCGGCCGTT 62.675 66.667 27.15 11.02 0.00 4.44
2218 2867 4.778143 ATGCGGGTGACTTCGGCC 62.778 66.667 0.00 0.00 0.00 6.13
2219 2868 3.195698 GATGCGGGTGACTTCGGC 61.196 66.667 1.90 0.00 0.00 5.54
2220 2869 2.885644 CGATGCGGGTGACTTCGG 60.886 66.667 1.90 0.00 0.00 4.30
2221 2870 2.885644 CCGATGCGGGTGACTTCG 60.886 66.667 0.00 0.00 44.15 3.79
2231 2880 1.636340 GTCCATTTCGTCCGATGCG 59.364 57.895 0.00 0.00 0.00 4.73
2232 2881 1.082117 ACGTCCATTTCGTCCGATGC 61.082 55.000 0.00 0.00 36.85 3.91
2235 2884 1.080366 CCACGTCCATTTCGTCCGA 60.080 57.895 0.00 0.00 39.55 4.55
2240 2889 2.225068 AGATAGCCACGTCCATTTCG 57.775 50.000 0.00 0.00 0.00 3.46
2242 2891 3.350219 ACAAGATAGCCACGTCCATTT 57.650 42.857 0.00 0.00 0.00 2.32
2294 2945 0.320160 GTAGTCGTGTTGGGTGGGTC 60.320 60.000 0.00 0.00 0.00 4.46
2326 2981 4.829492 AGACCAGGGACAAAAATTTCAGAG 59.171 41.667 0.00 0.00 0.00 3.35
2333 2990 4.292306 ACCTATCAGACCAGGGACAAAAAT 59.708 41.667 5.13 0.00 36.15 1.82
2352 3009 3.036452 AGCGGTATGGGACTAAACCTA 57.964 47.619 0.00 0.00 0.00 3.08
2482 3139 4.225042 TGTAGTCACAACCTAGGCATCATT 59.775 41.667 9.30 0.00 0.00 2.57
2483 3140 3.774766 TGTAGTCACAACCTAGGCATCAT 59.225 43.478 9.30 0.00 0.00 2.45
2484 3141 3.169908 TGTAGTCACAACCTAGGCATCA 58.830 45.455 9.30 0.00 0.00 3.07
2485 3142 3.887621 TGTAGTCACAACCTAGGCATC 57.112 47.619 9.30 0.00 0.00 3.91
2486 3143 4.844349 AATGTAGTCACAACCTAGGCAT 57.156 40.909 9.30 0.00 38.42 4.40
2492 3149 3.550820 TGTGCAAATGTAGTCACAACCT 58.449 40.909 0.00 0.00 38.42 3.50
2528 3185 1.822990 CGGTGTGCTAAGGAGAGGTTA 59.177 52.381 0.00 0.00 0.00 2.85
2649 5507 6.985645 AGACTTCAGACAAGATTCATCTATGC 59.014 38.462 0.00 0.00 35.76 3.14
2650 5508 8.819015 CAAGACTTCAGACAAGATTCATCTATG 58.181 37.037 0.00 0.00 35.76 2.23
2714 5573 6.276847 AGCCACATTCGTGAAATTAAAAACA 58.723 32.000 0.00 0.00 46.80 2.83
2726 5585 7.588854 CAGATTTATCAAATAGCCACATTCGTG 59.411 37.037 0.00 0.00 43.21 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.