Multiple sequence alignment - TraesCS7A01G481100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G481100 chr7A 100.000 3257 0 0 1 3257 673125509 673128765 0.000000e+00 6015.0
1 TraesCS7A01G481100 chr7A 86.336 2320 225 48 895 3197 673243824 673246068 0.000000e+00 2444.0
2 TraesCS7A01G481100 chr7A 78.265 2075 317 81 1003 3003 673305309 673307323 0.000000e+00 1210.0
3 TraesCS7A01G481100 chr7A 87.404 651 66 8 2144 2791 673314850 673315487 0.000000e+00 734.0
4 TraesCS7A01G481100 chr7D 93.896 2605 113 21 669 3257 581289343 581291917 0.000000e+00 3888.0
5 TraesCS7A01G481100 chr7D 86.503 2282 218 47 930 3197 581452237 581454442 0.000000e+00 2425.0
6 TraesCS7A01G481100 chr7D 86.741 1433 142 33 851 2275 581384469 581385861 0.000000e+00 1550.0
7 TraesCS7A01G481100 chr7D 83.448 870 95 26 2291 3155 581385974 581386799 0.000000e+00 763.0
8 TraesCS7A01G481100 chr7D 88.353 601 59 7 1536 2134 581297083 581297674 0.000000e+00 712.0
9 TraesCS7A01G481100 chr7D 85.870 460 53 8 2743 3197 581389610 581390062 2.270000e-131 479.0
10 TraesCS7A01G481100 chr7D 92.169 332 23 1 1 332 409253859 409253531 1.770000e-127 466.0
11 TraesCS7A01G481100 chr7D 88.773 383 22 9 670 1037 581288123 581288499 1.780000e-122 449.0
12 TraesCS7A01G481100 chr7D 88.274 307 27 4 1536 1833 581430857 581431163 3.090000e-95 359.0
13 TraesCS7A01G481100 chr7D 89.333 75 5 3 3185 3257 581690314 581690387 1.240000e-14 91.6
14 TraesCS7A01G481100 chr7B 92.390 2615 145 22 671 3257 648916279 648918867 0.000000e+00 3677.0
15 TraesCS7A01G481100 chr7B 92.685 1244 77 4 969 2212 648782931 648784160 0.000000e+00 1781.0
16 TraesCS7A01G481100 chr7B 86.490 1436 142 31 850 2275 649013380 649014773 0.000000e+00 1530.0
17 TraesCS7A01G481100 chr7B 84.678 1351 141 38 930 2275 649211322 649212611 0.000000e+00 1288.0
18 TraesCS7A01G481100 chr7B 87.759 1062 104 14 2142 3197 649014765 649015806 0.000000e+00 1218.0
19 TraesCS7A01G481100 chr7B 87.124 1064 109 16 2142 3197 649212603 649213646 0.000000e+00 1181.0
20 TraesCS7A01G481100 chr7B 77.731 2124 339 83 951 3003 649247351 649249411 0.000000e+00 1179.0
21 TraesCS7A01G481100 chr7B 87.193 937 95 13 2143 3075 649098348 649099263 0.000000e+00 1042.0
22 TraesCS7A01G481100 chr7B 87.784 704 69 7 1573 2275 649097668 649098355 0.000000e+00 808.0
23 TraesCS7A01G481100 chr3A 94.277 332 16 2 1 331 218316319 218315990 3.750000e-139 505.0
24 TraesCS7A01G481100 chr2B 93.994 333 18 1 1 333 742788254 742787924 1.350000e-138 503.0
25 TraesCS7A01G481100 chr4D 93.750 336 17 4 1 335 276855253 276854921 4.850000e-138 501.0
26 TraesCS7A01G481100 chr4D 93.235 340 19 3 1 339 204725161 204724825 6.280000e-137 497.0
27 TraesCS7A01G481100 chr4D 83.142 261 38 5 416 675 297785953 297785698 1.950000e-57 233.0
28 TraesCS7A01G481100 chr1B 91.617 334 20 4 1 333 430225941 430225615 3.830000e-124 455.0
29 TraesCS7A01G481100 chr4A 82.510 263 40 5 414 675 190190745 190191002 3.270000e-55 226.0
30 TraesCS7A01G481100 chr4A 100.000 30 0 0 305 334 520953765 520953794 4.540000e-04 56.5
31 TraesCS7A01G481100 chr5D 97.619 42 0 1 300 341 464140681 464140721 1.620000e-08 71.3
32 TraesCS7A01G481100 chr6B 74.839 155 35 4 180 334 8618891 8619041 2.100000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G481100 chr7A 673125509 673128765 3256 False 6015.000000 6015 100.0000 1 3257 1 chr7A.!!$F1 3256
1 TraesCS7A01G481100 chr7A 673243824 673246068 2244 False 2444.000000 2444 86.3360 895 3197 1 chr7A.!!$F2 2302
2 TraesCS7A01G481100 chr7A 673305309 673307323 2014 False 1210.000000 1210 78.2650 1003 3003 1 chr7A.!!$F3 2000
3 TraesCS7A01G481100 chr7A 673314850 673315487 637 False 734.000000 734 87.4040 2144 2791 1 chr7A.!!$F4 647
4 TraesCS7A01G481100 chr7D 581452237 581454442 2205 False 2425.000000 2425 86.5030 930 3197 1 chr7D.!!$F3 2267
5 TraesCS7A01G481100 chr7D 581288123 581291917 3794 False 2168.500000 3888 91.3345 669 3257 2 chr7D.!!$F5 2588
6 TraesCS7A01G481100 chr7D 581384469 581390062 5593 False 930.666667 1550 85.3530 851 3197 3 chr7D.!!$F6 2346
7 TraesCS7A01G481100 chr7D 581297083 581297674 591 False 712.000000 712 88.3530 1536 2134 1 chr7D.!!$F1 598
8 TraesCS7A01G481100 chr7B 648916279 648918867 2588 False 3677.000000 3677 92.3900 671 3257 1 chr7B.!!$F2 2586
9 TraesCS7A01G481100 chr7B 648782931 648784160 1229 False 1781.000000 1781 92.6850 969 2212 1 chr7B.!!$F1 1243
10 TraesCS7A01G481100 chr7B 649013380 649015806 2426 False 1374.000000 1530 87.1245 850 3197 2 chr7B.!!$F4 2347
11 TraesCS7A01G481100 chr7B 649211322 649213646 2324 False 1234.500000 1288 85.9010 930 3197 2 chr7B.!!$F6 2267
12 TraesCS7A01G481100 chr7B 649247351 649249411 2060 False 1179.000000 1179 77.7310 951 3003 1 chr7B.!!$F3 2052
13 TraesCS7A01G481100 chr7B 649097668 649099263 1595 False 925.000000 1042 87.4885 1573 3075 2 chr7B.!!$F5 1502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.178967 TGCAAGGCACCCTCATGAAA 60.179 50.0 0.0 0.0 31.71 2.69 F
1189 2417 0.037303 ACTCACCGACGACCTCCTTA 59.963 55.0 0.0 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1435 2675 0.174617 GAGAAGAGAAGGAGGCCGTG 59.825 60.0 0.0 0.0 0.00 4.94 R
2731 4175 0.323725 AATGGGAAGTGCTCGGCATT 60.324 50.0 1.9 0.0 41.91 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.500684 TCACAAGAAGTATCTCAAAATGGC 57.499 37.500 0.00 0.00 33.77 4.40
41 42 6.003326 TCACAAGAAGTATCTCAAAATGGCA 58.997 36.000 0.00 0.00 33.77 4.92
42 43 6.489700 TCACAAGAAGTATCTCAAAATGGCAA 59.510 34.615 0.00 0.00 33.77 4.52
43 44 7.177216 TCACAAGAAGTATCTCAAAATGGCAAT 59.823 33.333 0.00 0.00 33.77 3.56
44 45 8.461222 CACAAGAAGTATCTCAAAATGGCAATA 58.539 33.333 0.00 0.00 33.77 1.90
45 46 9.193806 ACAAGAAGTATCTCAAAATGGCAATAT 57.806 29.630 0.00 0.00 33.77 1.28
62 63 8.862325 TGGCAATATATACATAACCTTTCCTG 57.138 34.615 0.00 0.00 0.00 3.86
63 64 7.888021 TGGCAATATATACATAACCTTTCCTGG 59.112 37.037 0.00 0.00 0.00 4.45
64 65 7.148069 GGCAATATATACATAACCTTTCCTGGC 60.148 40.741 0.00 0.00 0.00 4.85
65 66 7.414098 GCAATATATACATAACCTTTCCTGGCG 60.414 40.741 0.00 0.00 0.00 5.69
66 67 3.926058 ATACATAACCTTTCCTGGCGT 57.074 42.857 0.00 0.00 0.00 5.68
67 68 2.109425 ACATAACCTTTCCTGGCGTC 57.891 50.000 0.00 0.00 0.00 5.19
68 69 1.339727 ACATAACCTTTCCTGGCGTCC 60.340 52.381 0.00 0.00 0.00 4.79
69 70 0.255033 ATAACCTTTCCTGGCGTCCC 59.745 55.000 0.00 0.00 0.00 4.46
70 71 1.844544 TAACCTTTCCTGGCGTCCCC 61.845 60.000 0.00 0.00 0.00 4.81
71 72 3.646715 CCTTTCCTGGCGTCCCCA 61.647 66.667 0.00 0.00 42.79 4.96
72 73 2.677228 CTTTCCTGGCGTCCCCAT 59.323 61.111 0.00 0.00 44.33 4.00
73 74 1.000896 CTTTCCTGGCGTCCCCATT 60.001 57.895 0.00 0.00 44.33 3.16
74 75 1.001393 TTTCCTGGCGTCCCCATTC 60.001 57.895 0.00 0.00 44.33 2.67
75 76 2.493273 TTTCCTGGCGTCCCCATTCC 62.493 60.000 0.00 0.00 44.33 3.01
76 77 3.727258 CCTGGCGTCCCCATTCCA 61.727 66.667 0.00 0.00 44.33 3.53
77 78 2.597340 CTGGCGTCCCCATTCCAT 59.403 61.111 0.00 0.00 44.33 3.41
78 79 1.705002 CCTGGCGTCCCCATTCCATA 61.705 60.000 0.00 0.00 44.33 2.74
79 80 0.401738 CTGGCGTCCCCATTCCATAT 59.598 55.000 0.00 0.00 44.33 1.78
80 81 0.400213 TGGCGTCCCCATTCCATATC 59.600 55.000 0.00 0.00 39.18 1.63
81 82 0.693049 GGCGTCCCCATTCCATATCT 59.307 55.000 0.00 0.00 0.00 1.98
82 83 1.073923 GGCGTCCCCATTCCATATCTT 59.926 52.381 0.00 0.00 0.00 2.40
83 84 2.489073 GGCGTCCCCATTCCATATCTTT 60.489 50.000 0.00 0.00 0.00 2.52
84 85 3.222603 GCGTCCCCATTCCATATCTTTT 58.777 45.455 0.00 0.00 0.00 2.27
85 86 3.253432 GCGTCCCCATTCCATATCTTTTC 59.747 47.826 0.00 0.00 0.00 2.29
86 87 4.718961 CGTCCCCATTCCATATCTTTTCT 58.281 43.478 0.00 0.00 0.00 2.52
87 88 5.133221 CGTCCCCATTCCATATCTTTTCTT 58.867 41.667 0.00 0.00 0.00 2.52
88 89 6.296026 CGTCCCCATTCCATATCTTTTCTTA 58.704 40.000 0.00 0.00 0.00 2.10
89 90 6.770785 CGTCCCCATTCCATATCTTTTCTTAA 59.229 38.462 0.00 0.00 0.00 1.85
90 91 7.448469 CGTCCCCATTCCATATCTTTTCTTAAT 59.552 37.037 0.00 0.00 0.00 1.40
91 92 9.147732 GTCCCCATTCCATATCTTTTCTTAATT 57.852 33.333 0.00 0.00 0.00 1.40
92 93 9.728100 TCCCCATTCCATATCTTTTCTTAATTT 57.272 29.630 0.00 0.00 0.00 1.82
93 94 9.768662 CCCCATTCCATATCTTTTCTTAATTTG 57.231 33.333 0.00 0.00 0.00 2.32
94 95 9.264719 CCCATTCCATATCTTTTCTTAATTTGC 57.735 33.333 0.00 0.00 0.00 3.68
144 145 9.759473 TCCTATGAGATCACTTATGTCATATCA 57.241 33.333 5.59 0.00 45.09 2.15
145 146 9.800433 CCTATGAGATCACTTATGTCATATCAC 57.200 37.037 5.59 0.00 45.09 3.06
148 149 8.242729 TGAGATCACTTATGTCATATCACTGT 57.757 34.615 0.00 0.00 33.16 3.55
149 150 9.354673 TGAGATCACTTATGTCATATCACTGTA 57.645 33.333 0.00 0.00 33.16 2.74
188 189 9.672673 ATGATACACTTTGCTATCTTTACAACT 57.327 29.630 0.00 0.00 0.00 3.16
195 196 9.819267 ACTTTGCTATCTTTACAACTATACTCC 57.181 33.333 0.00 0.00 0.00 3.85
196 197 9.817809 CTTTGCTATCTTTACAACTATACTCCA 57.182 33.333 0.00 0.00 0.00 3.86
198 199 9.817809 TTGCTATCTTTACAACTATACTCCAAG 57.182 33.333 0.00 0.00 0.00 3.61
199 200 8.978472 TGCTATCTTTACAACTATACTCCAAGT 58.022 33.333 0.00 0.00 0.00 3.16
209 210 9.690913 ACAACTATACTCCAAGTACTATGTACA 57.309 33.333 0.00 0.00 32.84 2.90
213 214 9.627395 CTATACTCCAAGTACTATGTACATTGC 57.373 37.037 14.77 0.23 32.84 3.56
214 215 6.294361 ACTCCAAGTACTATGTACATTGCA 57.706 37.500 14.77 0.00 0.00 4.08
215 216 6.341316 ACTCCAAGTACTATGTACATTGCAG 58.659 40.000 14.77 8.11 0.00 4.41
216 217 6.070767 ACTCCAAGTACTATGTACATTGCAGT 60.071 38.462 14.77 13.73 0.00 4.40
217 218 6.707290 TCCAAGTACTATGTACATTGCAGTT 58.293 36.000 14.77 9.06 0.00 3.16
218 219 7.165485 TCCAAGTACTATGTACATTGCAGTTT 58.835 34.615 14.77 1.44 0.00 2.66
219 220 7.663905 TCCAAGTACTATGTACATTGCAGTTTT 59.336 33.333 14.77 7.15 0.00 2.43
220 221 8.296713 CCAAGTACTATGTACATTGCAGTTTTT 58.703 33.333 14.77 6.84 0.00 1.94
255 256 5.690997 ATAAGAGATCTACGATGCGAACA 57.309 39.130 0.00 0.00 0.00 3.18
256 257 4.371855 AAGAGATCTACGATGCGAACAA 57.628 40.909 0.00 0.00 0.00 2.83
257 258 4.371855 AGAGATCTACGATGCGAACAAA 57.628 40.909 0.00 0.00 0.00 2.83
258 259 4.938080 AGAGATCTACGATGCGAACAAAT 58.062 39.130 0.00 0.00 0.00 2.32
259 260 5.352284 AGAGATCTACGATGCGAACAAATT 58.648 37.500 0.00 0.00 0.00 1.82
260 261 5.812642 AGAGATCTACGATGCGAACAAATTT 59.187 36.000 0.00 0.00 0.00 1.82
261 262 6.978659 AGAGATCTACGATGCGAACAAATTTA 59.021 34.615 0.00 0.00 0.00 1.40
262 263 7.166628 AGATCTACGATGCGAACAAATTTAG 57.833 36.000 0.00 0.00 0.00 1.85
263 264 6.757010 AGATCTACGATGCGAACAAATTTAGT 59.243 34.615 0.00 0.00 0.00 2.24
264 265 6.327177 TCTACGATGCGAACAAATTTAGTC 57.673 37.500 0.00 0.00 0.00 2.59
265 266 5.865013 TCTACGATGCGAACAAATTTAGTCA 59.135 36.000 0.00 0.00 0.00 3.41
266 267 5.351233 ACGATGCGAACAAATTTAGTCAA 57.649 34.783 0.00 0.00 0.00 3.18
267 268 5.144359 ACGATGCGAACAAATTTAGTCAAC 58.856 37.500 0.00 0.00 0.00 3.18
268 269 5.049680 ACGATGCGAACAAATTTAGTCAACT 60.050 36.000 0.00 0.00 0.00 3.16
269 270 5.851177 CGATGCGAACAAATTTAGTCAACTT 59.149 36.000 0.00 0.00 0.00 2.66
270 271 7.012943 CGATGCGAACAAATTTAGTCAACTTA 58.987 34.615 0.00 0.00 0.00 2.24
271 272 7.692291 CGATGCGAACAAATTTAGTCAACTTAT 59.308 33.333 0.00 0.00 0.00 1.73
272 273 9.982291 GATGCGAACAAATTTAGTCAACTTATA 57.018 29.630 0.00 0.00 0.00 0.98
297 298 6.665992 ATTCTTATACGCATAGGACCAAGA 57.334 37.500 0.00 0.00 0.00 3.02
298 299 5.707242 TCTTATACGCATAGGACCAAGAG 57.293 43.478 0.00 0.00 0.00 2.85
299 300 5.138276 TCTTATACGCATAGGACCAAGAGT 58.862 41.667 0.00 0.00 0.00 3.24
300 301 5.597182 TCTTATACGCATAGGACCAAGAGTT 59.403 40.000 0.00 0.00 0.00 3.01
301 302 4.755266 ATACGCATAGGACCAAGAGTTT 57.245 40.909 0.00 0.00 0.00 2.66
302 303 2.973945 ACGCATAGGACCAAGAGTTTC 58.026 47.619 0.00 0.00 0.00 2.78
303 304 2.567615 ACGCATAGGACCAAGAGTTTCT 59.432 45.455 0.00 0.00 0.00 2.52
304 305 2.932614 CGCATAGGACCAAGAGTTTCTG 59.067 50.000 0.00 0.00 0.00 3.02
305 306 3.617531 CGCATAGGACCAAGAGTTTCTGT 60.618 47.826 0.00 0.00 0.00 3.41
306 307 4.381612 CGCATAGGACCAAGAGTTTCTGTA 60.382 45.833 0.00 0.00 0.00 2.74
307 308 5.112686 GCATAGGACCAAGAGTTTCTGTAG 58.887 45.833 0.00 0.00 0.00 2.74
308 309 3.686916 AGGACCAAGAGTTTCTGTAGC 57.313 47.619 0.00 0.00 0.00 3.58
309 310 2.972713 AGGACCAAGAGTTTCTGTAGCA 59.027 45.455 0.00 0.00 0.00 3.49
310 311 3.391296 AGGACCAAGAGTTTCTGTAGCAA 59.609 43.478 0.00 0.00 0.00 3.91
311 312 3.498777 GGACCAAGAGTTTCTGTAGCAAC 59.501 47.826 0.00 0.00 0.00 4.17
312 313 3.131396 ACCAAGAGTTTCTGTAGCAACG 58.869 45.455 0.00 0.00 0.00 4.10
313 314 2.096218 CCAAGAGTTTCTGTAGCAACGC 60.096 50.000 0.00 0.00 0.00 4.84
314 315 1.419374 AGAGTTTCTGTAGCAACGCG 58.581 50.000 3.53 3.53 0.00 6.01
315 316 0.179248 GAGTTTCTGTAGCAACGCGC 60.179 55.000 5.73 0.00 42.91 6.86
316 317 0.878523 AGTTTCTGTAGCAACGCGCA 60.879 50.000 5.73 0.00 46.13 6.09
317 318 0.451135 GTTTCTGTAGCAACGCGCAG 60.451 55.000 5.73 4.12 46.13 5.18
318 319 1.565156 TTTCTGTAGCAACGCGCAGG 61.565 55.000 5.73 0.00 46.13 4.85
319 320 3.490759 CTGTAGCAACGCGCAGGG 61.491 66.667 5.73 0.00 46.13 4.45
329 330 3.408389 CGCGCAGGGTATCATCTAG 57.592 57.895 8.75 0.00 34.98 2.43
330 331 0.598562 CGCGCAGGGTATCATCTAGT 59.401 55.000 8.75 0.00 34.98 2.57
331 332 1.000163 CGCGCAGGGTATCATCTAGTT 60.000 52.381 8.75 0.00 34.98 2.24
332 333 2.545952 CGCGCAGGGTATCATCTAGTTT 60.546 50.000 8.75 0.00 34.98 2.66
333 334 3.467803 GCGCAGGGTATCATCTAGTTTT 58.532 45.455 0.30 0.00 0.00 2.43
334 335 4.628074 GCGCAGGGTATCATCTAGTTTTA 58.372 43.478 0.30 0.00 0.00 1.52
335 336 5.054477 GCGCAGGGTATCATCTAGTTTTAA 58.946 41.667 0.30 0.00 0.00 1.52
336 337 5.701290 GCGCAGGGTATCATCTAGTTTTAAT 59.299 40.000 0.30 0.00 0.00 1.40
337 338 6.872020 GCGCAGGGTATCATCTAGTTTTAATA 59.128 38.462 0.30 0.00 0.00 0.98
338 339 7.063544 GCGCAGGGTATCATCTAGTTTTAATAG 59.936 40.741 0.30 0.00 0.00 1.73
339 340 8.304596 CGCAGGGTATCATCTAGTTTTAATAGA 58.695 37.037 0.00 0.00 33.93 1.98
340 341 9.646427 GCAGGGTATCATCTAGTTTTAATAGAG 57.354 37.037 0.00 0.00 32.96 2.43
342 343 9.327731 AGGGTATCATCTAGTTTTAATAGAGGG 57.672 37.037 0.00 0.00 33.10 4.30
343 344 8.041919 GGGTATCATCTAGTTTTAATAGAGGGC 58.958 40.741 0.00 0.00 33.10 5.19
344 345 8.594550 GGTATCATCTAGTTTTAATAGAGGGCA 58.405 37.037 0.00 0.00 33.10 5.36
345 346 9.425577 GTATCATCTAGTTTTAATAGAGGGCAC 57.574 37.037 0.00 0.00 33.10 5.01
346 347 6.513180 TCATCTAGTTTTAATAGAGGGCACG 58.487 40.000 0.00 0.00 33.10 5.34
347 348 5.927281 TCTAGTTTTAATAGAGGGCACGT 57.073 39.130 0.00 0.00 0.00 4.49
348 349 5.657474 TCTAGTTTTAATAGAGGGCACGTG 58.343 41.667 12.28 12.28 0.00 4.49
349 350 3.007635 AGTTTTAATAGAGGGCACGTGC 58.992 45.455 32.15 32.15 41.14 5.34
350 351 2.745281 GTTTTAATAGAGGGCACGTGCA 59.255 45.455 38.60 20.86 44.36 4.57
351 352 2.772077 TTAATAGAGGGCACGTGCAA 57.228 45.000 38.60 20.65 44.36 4.08
352 353 2.309528 TAATAGAGGGCACGTGCAAG 57.690 50.000 38.60 4.30 44.36 4.01
353 354 0.392998 AATAGAGGGCACGTGCAAGG 60.393 55.000 38.60 3.87 44.36 3.61
354 355 2.876368 ATAGAGGGCACGTGCAAGGC 62.876 60.000 38.60 24.46 44.36 4.35
364 365 3.169378 TGCAAGGCACCCTCATGA 58.831 55.556 0.00 0.00 31.71 3.07
365 366 1.459812 TGCAAGGCACCCTCATGAA 59.540 52.632 0.00 0.00 31.71 2.57
366 367 0.178967 TGCAAGGCACCCTCATGAAA 60.179 50.000 0.00 0.00 31.71 2.69
367 368 0.244721 GCAAGGCACCCTCATGAAAC 59.755 55.000 0.00 0.00 30.89 2.78
368 369 0.890683 CAAGGCACCCTCATGAAACC 59.109 55.000 0.00 0.00 30.89 3.27
369 370 0.779997 AAGGCACCCTCATGAAACCT 59.220 50.000 0.00 0.00 30.89 3.50
370 371 0.329596 AGGCACCCTCATGAAACCTC 59.670 55.000 0.00 0.00 0.00 3.85
371 372 0.329596 GGCACCCTCATGAAACCTCT 59.670 55.000 0.00 0.00 0.00 3.69
372 373 1.272147 GGCACCCTCATGAAACCTCTT 60.272 52.381 0.00 0.00 0.00 2.85
373 374 2.519013 GCACCCTCATGAAACCTCTTT 58.481 47.619 0.00 0.00 0.00 2.52
374 375 2.489722 GCACCCTCATGAAACCTCTTTC 59.510 50.000 0.00 0.00 36.97 2.62
375 376 2.744202 CACCCTCATGAAACCTCTTTCG 59.256 50.000 0.00 0.00 39.01 3.46
376 377 2.637872 ACCCTCATGAAACCTCTTTCGA 59.362 45.455 0.00 0.00 39.01 3.71
377 378 3.264450 ACCCTCATGAAACCTCTTTCGAT 59.736 43.478 0.00 0.00 39.01 3.59
378 379 4.469945 ACCCTCATGAAACCTCTTTCGATA 59.530 41.667 0.00 0.00 39.01 2.92
379 380 5.053145 CCCTCATGAAACCTCTTTCGATAG 58.947 45.833 0.00 0.00 39.01 2.08
395 396 3.987868 TCGATAGAATTATTGGAGCGTGC 59.012 43.478 0.00 0.00 46.15 5.34
396 397 3.740832 CGATAGAATTATTGGAGCGTGCA 59.259 43.478 0.00 0.00 39.76 4.57
397 398 4.211164 CGATAGAATTATTGGAGCGTGCAA 59.789 41.667 0.00 0.00 39.76 4.08
398 399 5.613360 CGATAGAATTATTGGAGCGTGCAAG 60.613 44.000 0.00 0.00 39.76 4.01
399 400 2.684881 AGAATTATTGGAGCGTGCAAGG 59.315 45.455 0.79 0.00 29.36 3.61
400 401 1.392589 ATTATTGGAGCGTGCAAGGG 58.607 50.000 0.79 0.00 29.36 3.95
401 402 0.679640 TTATTGGAGCGTGCAAGGGG 60.680 55.000 0.79 0.00 29.36 4.79
412 413 3.781760 CAAGGGGCATTGCACTGT 58.218 55.556 11.32 0.00 29.71 3.55
413 414 2.959967 CAAGGGGCATTGCACTGTA 58.040 52.632 11.32 0.00 29.71 2.74
414 415 0.527565 CAAGGGGCATTGCACTGTAC 59.472 55.000 11.32 0.00 29.71 2.90
415 416 0.611896 AAGGGGCATTGCACTGTACC 60.612 55.000 11.32 8.38 29.71 3.34
416 417 1.304052 GGGGCATTGCACTGTACCA 60.304 57.895 11.32 0.00 29.71 3.25
417 418 0.684153 GGGGCATTGCACTGTACCAT 60.684 55.000 11.32 0.00 29.71 3.55
418 419 0.740737 GGGCATTGCACTGTACCATC 59.259 55.000 11.39 0.00 0.00 3.51
419 420 1.462616 GGCATTGCACTGTACCATCA 58.537 50.000 11.39 0.00 0.00 3.07
420 421 2.026641 GGCATTGCACTGTACCATCAT 58.973 47.619 11.39 0.00 0.00 2.45
421 422 2.033801 GGCATTGCACTGTACCATCATC 59.966 50.000 11.39 0.00 0.00 2.92
422 423 2.947652 GCATTGCACTGTACCATCATCT 59.052 45.455 3.15 0.00 0.00 2.90
423 424 3.379372 GCATTGCACTGTACCATCATCTT 59.621 43.478 3.15 0.00 0.00 2.40
424 425 4.497006 GCATTGCACTGTACCATCATCTTC 60.497 45.833 3.15 0.00 0.00 2.87
425 426 4.558226 TTGCACTGTACCATCATCTTCT 57.442 40.909 0.00 0.00 0.00 2.85
426 427 4.558226 TGCACTGTACCATCATCTTCTT 57.442 40.909 0.00 0.00 0.00 2.52
427 428 4.507710 TGCACTGTACCATCATCTTCTTC 58.492 43.478 0.00 0.00 0.00 2.87
428 429 3.553511 GCACTGTACCATCATCTTCTTCG 59.446 47.826 0.00 0.00 0.00 3.79
429 430 4.678044 GCACTGTACCATCATCTTCTTCGA 60.678 45.833 0.00 0.00 0.00 3.71
430 431 5.595885 CACTGTACCATCATCTTCTTCGAT 58.404 41.667 0.00 0.00 0.00 3.59
431 432 6.735968 GCACTGTACCATCATCTTCTTCGATA 60.736 42.308 0.00 0.00 0.00 2.92
432 433 7.203218 CACTGTACCATCATCTTCTTCGATAA 58.797 38.462 0.00 0.00 0.00 1.75
433 434 7.168302 CACTGTACCATCATCTTCTTCGATAAC 59.832 40.741 0.00 0.00 0.00 1.89
434 435 7.107639 TGTACCATCATCTTCTTCGATAACA 57.892 36.000 0.00 0.00 0.00 2.41
435 436 6.978659 TGTACCATCATCTTCTTCGATAACAC 59.021 38.462 0.00 0.00 0.00 3.32
436 437 5.977635 ACCATCATCTTCTTCGATAACACA 58.022 37.500 0.00 0.00 0.00 3.72
437 438 6.406370 ACCATCATCTTCTTCGATAACACAA 58.594 36.000 0.00 0.00 0.00 3.33
438 439 6.878923 ACCATCATCTTCTTCGATAACACAAA 59.121 34.615 0.00 0.00 0.00 2.83
439 440 7.148407 ACCATCATCTTCTTCGATAACACAAAC 60.148 37.037 0.00 0.00 0.00 2.93
440 441 6.721571 TCATCTTCTTCGATAACACAAACC 57.278 37.500 0.00 0.00 0.00 3.27
441 442 6.464222 TCATCTTCTTCGATAACACAAACCT 58.536 36.000 0.00 0.00 0.00 3.50
442 443 6.590292 TCATCTTCTTCGATAACACAAACCTC 59.410 38.462 0.00 0.00 0.00 3.85
443 444 6.097915 TCTTCTTCGATAACACAAACCTCT 57.902 37.500 0.00 0.00 0.00 3.69
444 445 6.522054 TCTTCTTCGATAACACAAACCTCTT 58.478 36.000 0.00 0.00 0.00 2.85
445 446 6.990349 TCTTCTTCGATAACACAAACCTCTTT 59.010 34.615 0.00 0.00 0.00 2.52
446 447 8.145767 TCTTCTTCGATAACACAAACCTCTTTA 58.854 33.333 0.00 0.00 0.00 1.85
447 448 8.665643 TTCTTCGATAACACAAACCTCTTTAA 57.334 30.769 0.00 0.00 0.00 1.52
448 449 8.665643 TCTTCGATAACACAAACCTCTTTAAA 57.334 30.769 0.00 0.00 0.00 1.52
449 450 9.280174 TCTTCGATAACACAAACCTCTTTAAAT 57.720 29.630 0.00 0.00 0.00 1.40
452 453 9.932207 TCGATAACACAAACCTCTTTAAATAGA 57.068 29.630 2.31 0.00 0.00 1.98
457 458 9.740710 AACACAAACCTCTTTAAATAGATAGCT 57.259 29.630 2.31 0.00 0.00 3.32
458 459 9.384764 ACACAAACCTCTTTAAATAGATAGCTC 57.615 33.333 2.31 0.00 0.00 4.09
459 460 8.831550 CACAAACCTCTTTAAATAGATAGCTCC 58.168 37.037 2.31 0.00 0.00 4.70
460 461 7.711339 ACAAACCTCTTTAAATAGATAGCTCCG 59.289 37.037 2.31 0.00 0.00 4.63
461 462 6.980416 ACCTCTTTAAATAGATAGCTCCGT 57.020 37.500 2.31 0.00 0.00 4.69
462 463 6.983984 ACCTCTTTAAATAGATAGCTCCGTC 58.016 40.000 2.31 0.00 0.00 4.79
463 464 6.015265 ACCTCTTTAAATAGATAGCTCCGTCC 60.015 42.308 2.31 0.00 0.00 4.79
464 465 6.015350 CCTCTTTAAATAGATAGCTCCGTCCA 60.015 42.308 2.31 0.00 0.00 4.02
465 466 7.356089 TCTTTAAATAGATAGCTCCGTCCAA 57.644 36.000 0.00 0.00 0.00 3.53
466 467 7.963532 TCTTTAAATAGATAGCTCCGTCCAAT 58.036 34.615 0.00 0.00 0.00 3.16
467 468 9.085645 TCTTTAAATAGATAGCTCCGTCCAATA 57.914 33.333 0.00 0.00 0.00 1.90
468 469 9.877178 CTTTAAATAGATAGCTCCGTCCAATAT 57.123 33.333 0.00 0.00 0.00 1.28
469 470 9.653287 TTTAAATAGATAGCTCCGTCCAATATG 57.347 33.333 0.00 0.00 0.00 1.78
470 471 7.482169 AAATAGATAGCTCCGTCCAATATGA 57.518 36.000 0.00 0.00 0.00 2.15
471 472 6.707440 ATAGATAGCTCCGTCCAATATGAG 57.293 41.667 0.00 0.00 0.00 2.90
473 474 3.997672 GCTCCGTCCAATATGAGCT 57.002 52.632 0.00 0.00 45.21 4.09
474 475 2.246719 GCTCCGTCCAATATGAGCTT 57.753 50.000 0.00 0.00 45.21 3.74
475 476 1.869767 GCTCCGTCCAATATGAGCTTG 59.130 52.381 0.00 0.00 45.21 4.01
476 477 2.483714 GCTCCGTCCAATATGAGCTTGA 60.484 50.000 0.00 0.00 45.21 3.02
477 478 3.388308 CTCCGTCCAATATGAGCTTGAG 58.612 50.000 0.00 0.00 0.00 3.02
478 479 3.031013 TCCGTCCAATATGAGCTTGAGA 58.969 45.455 0.00 0.00 0.00 3.27
479 480 3.643320 TCCGTCCAATATGAGCTTGAGAT 59.357 43.478 0.00 0.00 0.00 2.75
480 481 3.744942 CCGTCCAATATGAGCTTGAGATG 59.255 47.826 0.00 0.00 0.00 2.90
481 482 3.744942 CGTCCAATATGAGCTTGAGATGG 59.255 47.826 0.00 0.00 0.00 3.51
482 483 4.502087 CGTCCAATATGAGCTTGAGATGGA 60.502 45.833 7.23 7.23 33.54 3.41
483 484 4.754114 GTCCAATATGAGCTTGAGATGGAC 59.246 45.833 19.51 19.51 45.97 4.02
484 485 4.657504 TCCAATATGAGCTTGAGATGGACT 59.342 41.667 7.23 0.00 31.12 3.85
485 486 4.996122 CCAATATGAGCTTGAGATGGACTC 59.004 45.833 3.46 0.00 45.11 3.36
496 497 2.996621 GAGATGGACTCGTTCAAGTTGG 59.003 50.000 2.34 0.00 35.84 3.77
497 498 2.368875 AGATGGACTCGTTCAAGTTGGT 59.631 45.455 2.34 0.00 0.00 3.67
498 499 3.576982 AGATGGACTCGTTCAAGTTGGTA 59.423 43.478 2.34 0.00 0.00 3.25
499 500 3.102052 TGGACTCGTTCAAGTTGGTAC 57.898 47.619 2.34 1.27 0.00 3.34
500 501 2.696707 TGGACTCGTTCAAGTTGGTACT 59.303 45.455 2.34 0.00 35.68 2.73
501 502 3.057734 GGACTCGTTCAAGTTGGTACTG 58.942 50.000 2.34 1.43 34.01 2.74
502 503 3.057734 GACTCGTTCAAGTTGGTACTGG 58.942 50.000 2.34 1.15 34.01 4.00
503 504 2.696707 ACTCGTTCAAGTTGGTACTGGA 59.303 45.455 2.34 0.00 34.01 3.86
504 505 3.243771 ACTCGTTCAAGTTGGTACTGGAG 60.244 47.826 2.34 7.46 35.74 3.86
505 506 1.798813 CGTTCAAGTTGGTACTGGAGC 59.201 52.381 2.34 0.00 35.74 4.70
506 507 2.548067 CGTTCAAGTTGGTACTGGAGCT 60.548 50.000 2.34 0.00 35.74 4.09
507 508 3.305813 CGTTCAAGTTGGTACTGGAGCTA 60.306 47.826 2.34 0.00 35.74 3.32
508 509 4.638304 GTTCAAGTTGGTACTGGAGCTAA 58.362 43.478 2.34 0.00 35.74 3.09
509 510 4.267349 TCAAGTTGGTACTGGAGCTAAC 57.733 45.455 2.34 0.00 34.01 2.34
510 511 3.007614 TCAAGTTGGTACTGGAGCTAACC 59.992 47.826 2.34 0.00 34.01 2.85
511 512 2.616524 AGTTGGTACTGGAGCTAACCA 58.383 47.619 0.00 0.00 40.19 3.67
512 513 3.182152 AGTTGGTACTGGAGCTAACCAT 58.818 45.455 0.00 0.00 41.46 3.55
513 514 3.055094 AGTTGGTACTGGAGCTAACCATG 60.055 47.826 0.00 0.00 41.46 3.66
514 515 1.209504 TGGTACTGGAGCTAACCATGC 59.790 52.381 0.00 0.00 37.09 4.06
515 516 1.209504 GGTACTGGAGCTAACCATGCA 59.790 52.381 0.00 0.00 39.34 3.96
516 517 2.355716 GGTACTGGAGCTAACCATGCAA 60.356 50.000 0.00 0.00 39.34 4.08
517 518 2.584835 ACTGGAGCTAACCATGCAAA 57.415 45.000 0.00 0.00 39.34 3.68
518 519 2.162681 ACTGGAGCTAACCATGCAAAC 58.837 47.619 0.00 0.00 39.34 2.93
519 520 2.161855 CTGGAGCTAACCATGCAAACA 58.838 47.619 0.00 0.00 39.34 2.83
520 521 2.756760 CTGGAGCTAACCATGCAAACAT 59.243 45.455 0.00 0.00 39.34 2.71
521 522 2.754552 TGGAGCTAACCATGCAAACATC 59.245 45.455 0.00 0.00 32.87 3.06
522 523 2.754552 GGAGCTAACCATGCAAACATCA 59.245 45.455 0.00 0.00 32.87 3.07
523 524 3.193267 GGAGCTAACCATGCAAACATCAA 59.807 43.478 0.00 0.00 32.87 2.57
524 525 4.168760 GAGCTAACCATGCAAACATCAAC 58.831 43.478 0.00 0.00 32.87 3.18
525 526 3.573538 AGCTAACCATGCAAACATCAACA 59.426 39.130 0.00 0.00 32.87 3.33
526 527 4.221262 AGCTAACCATGCAAACATCAACAT 59.779 37.500 0.00 0.00 32.87 2.71
527 528 4.931002 GCTAACCATGCAAACATCAACATT 59.069 37.500 0.00 0.00 32.87 2.71
528 529 6.071447 AGCTAACCATGCAAACATCAACATTA 60.071 34.615 0.00 0.00 32.87 1.90
529 530 6.589523 GCTAACCATGCAAACATCAACATTAA 59.410 34.615 0.00 0.00 32.87 1.40
530 531 7.201461 GCTAACCATGCAAACATCAACATTAAG 60.201 37.037 0.00 0.00 32.87 1.85
531 532 6.343716 ACCATGCAAACATCAACATTAAGA 57.656 33.333 0.00 0.00 32.87 2.10
532 533 6.938507 ACCATGCAAACATCAACATTAAGAT 58.061 32.000 0.00 0.00 32.87 2.40
533 534 7.388437 ACCATGCAAACATCAACATTAAGATT 58.612 30.769 0.00 0.00 32.87 2.40
534 535 7.332430 ACCATGCAAACATCAACATTAAGATTG 59.668 33.333 0.00 0.00 32.87 2.67
535 536 7.201574 CCATGCAAACATCAACATTAAGATTGG 60.202 37.037 0.00 0.00 32.87 3.16
536 537 6.757237 TGCAAACATCAACATTAAGATTGGT 58.243 32.000 0.00 0.00 0.00 3.67
537 538 7.215789 TGCAAACATCAACATTAAGATTGGTT 58.784 30.769 0.00 0.00 0.00 3.67
538 539 8.363390 TGCAAACATCAACATTAAGATTGGTTA 58.637 29.630 0.00 0.00 0.00 2.85
539 540 9.202273 GCAAACATCAACATTAAGATTGGTTAA 57.798 29.630 2.57 0.00 0.00 2.01
541 542 9.927668 AAACATCAACATTAAGATTGGTTAAGG 57.072 29.630 2.57 0.00 31.49 2.69
542 543 7.547227 ACATCAACATTAAGATTGGTTAAGGC 58.453 34.615 2.57 0.00 28.79 4.35
543 544 7.397192 ACATCAACATTAAGATTGGTTAAGGCT 59.603 33.333 2.57 0.00 28.79 4.58
544 545 7.775053 TCAACATTAAGATTGGTTAAGGCTT 57.225 32.000 4.58 4.58 28.79 4.35
545 546 8.189119 TCAACATTAAGATTGGTTAAGGCTTT 57.811 30.769 4.45 0.00 28.79 3.51
546 547 8.646900 TCAACATTAAGATTGGTTAAGGCTTTT 58.353 29.630 4.45 0.00 28.79 2.27
547 548 8.711457 CAACATTAAGATTGGTTAAGGCTTTTG 58.289 33.333 4.45 0.00 28.79 2.44
548 549 7.386059 ACATTAAGATTGGTTAAGGCTTTTGG 58.614 34.615 4.45 0.00 28.79 3.28
549 550 3.961480 AGATTGGTTAAGGCTTTTGGC 57.039 42.857 4.45 0.00 46.43 4.52
560 561 3.526931 GGCTTTTGGCTTTTCTATCCC 57.473 47.619 0.00 0.00 42.31 3.85
561 562 2.831526 GGCTTTTGGCTTTTCTATCCCA 59.168 45.455 0.00 0.00 42.31 4.37
562 563 3.452264 GGCTTTTGGCTTTTCTATCCCAT 59.548 43.478 0.00 0.00 42.31 4.00
563 564 4.649218 GGCTTTTGGCTTTTCTATCCCATA 59.351 41.667 0.00 0.00 42.31 2.74
564 565 5.451937 GGCTTTTGGCTTTTCTATCCCATAC 60.452 44.000 0.00 0.00 42.31 2.39
565 566 5.733373 GCTTTTGGCTTTTCTATCCCATACG 60.733 44.000 0.00 0.00 38.06 3.06
566 567 2.846193 TGGCTTTTCTATCCCATACGC 58.154 47.619 0.00 0.00 0.00 4.42
567 568 2.438021 TGGCTTTTCTATCCCATACGCT 59.562 45.455 0.00 0.00 0.00 5.07
568 569 3.067833 GGCTTTTCTATCCCATACGCTC 58.932 50.000 0.00 0.00 0.00 5.03
569 570 3.244249 GGCTTTTCTATCCCATACGCTCT 60.244 47.826 0.00 0.00 0.00 4.09
570 571 4.381411 GCTTTTCTATCCCATACGCTCTT 58.619 43.478 0.00 0.00 0.00 2.85
571 572 4.212214 GCTTTTCTATCCCATACGCTCTTG 59.788 45.833 0.00 0.00 0.00 3.02
572 573 5.353394 TTTTCTATCCCATACGCTCTTGT 57.647 39.130 0.00 0.00 0.00 3.16
573 574 4.585955 TTCTATCCCATACGCTCTTGTC 57.414 45.455 0.00 0.00 0.00 3.18
574 575 3.562182 TCTATCCCATACGCTCTTGTCA 58.438 45.455 0.00 0.00 0.00 3.58
575 576 2.604046 ATCCCATACGCTCTTGTCAC 57.396 50.000 0.00 0.00 0.00 3.67
576 577 1.262417 TCCCATACGCTCTTGTCACA 58.738 50.000 0.00 0.00 0.00 3.58
577 578 1.831106 TCCCATACGCTCTTGTCACAT 59.169 47.619 0.00 0.00 0.00 3.21
578 579 1.935873 CCCATACGCTCTTGTCACATG 59.064 52.381 0.00 0.00 0.00 3.21
579 580 2.418609 CCCATACGCTCTTGTCACATGA 60.419 50.000 0.00 0.00 0.00 3.07
580 581 3.261580 CCATACGCTCTTGTCACATGAA 58.738 45.455 0.00 0.00 0.00 2.57
581 582 3.684305 CCATACGCTCTTGTCACATGAAA 59.316 43.478 0.00 0.00 0.00 2.69
582 583 4.154015 CCATACGCTCTTGTCACATGAAAA 59.846 41.667 0.00 0.00 0.00 2.29
583 584 5.163723 CCATACGCTCTTGTCACATGAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
584 585 4.410492 ACGCTCTTGTCACATGAAAATC 57.590 40.909 0.00 0.00 0.00 2.17
585 586 3.814842 ACGCTCTTGTCACATGAAAATCA 59.185 39.130 0.00 0.00 0.00 2.57
586 587 4.456911 ACGCTCTTGTCACATGAAAATCAT 59.543 37.500 0.00 0.00 37.65 2.45
587 588 5.026462 CGCTCTTGTCACATGAAAATCATC 58.974 41.667 0.00 0.00 34.28 2.92
588 589 5.338365 GCTCTTGTCACATGAAAATCATCC 58.662 41.667 0.00 0.00 34.28 3.51
589 590 5.125097 GCTCTTGTCACATGAAAATCATCCT 59.875 40.000 0.00 0.00 34.28 3.24
590 591 6.677431 GCTCTTGTCACATGAAAATCATCCTC 60.677 42.308 0.00 0.00 34.28 3.71
591 592 5.649395 TCTTGTCACATGAAAATCATCCTCC 59.351 40.000 0.00 0.00 34.28 4.30
592 593 4.272489 TGTCACATGAAAATCATCCTCCC 58.728 43.478 0.00 0.00 34.28 4.30
593 594 4.018141 TGTCACATGAAAATCATCCTCCCT 60.018 41.667 0.00 0.00 34.28 4.20
594 595 4.337555 GTCACATGAAAATCATCCTCCCTG 59.662 45.833 0.00 0.00 34.28 4.45
595 596 3.067742 CACATGAAAATCATCCTCCCTGC 59.932 47.826 0.00 0.00 34.28 4.85
596 597 3.053095 ACATGAAAATCATCCTCCCTGCT 60.053 43.478 0.00 0.00 34.28 4.24
597 598 4.166725 ACATGAAAATCATCCTCCCTGCTA 59.833 41.667 0.00 0.00 34.28 3.49
598 599 4.860802 TGAAAATCATCCTCCCTGCTAA 57.139 40.909 0.00 0.00 0.00 3.09
599 600 4.526970 TGAAAATCATCCTCCCTGCTAAC 58.473 43.478 0.00 0.00 0.00 2.34
600 601 3.584733 AAATCATCCTCCCTGCTAACC 57.415 47.619 0.00 0.00 0.00 2.85
601 602 2.196742 ATCATCCTCCCTGCTAACCA 57.803 50.000 0.00 0.00 0.00 3.67
602 603 1.204146 TCATCCTCCCTGCTAACCAC 58.796 55.000 0.00 0.00 0.00 4.16
603 604 0.911769 CATCCTCCCTGCTAACCACA 59.088 55.000 0.00 0.00 0.00 4.17
604 605 1.492176 CATCCTCCCTGCTAACCACAT 59.508 52.381 0.00 0.00 0.00 3.21
605 606 1.668826 TCCTCCCTGCTAACCACATT 58.331 50.000 0.00 0.00 0.00 2.71
606 607 1.559682 TCCTCCCTGCTAACCACATTC 59.440 52.381 0.00 0.00 0.00 2.67
607 608 1.561542 CCTCCCTGCTAACCACATTCT 59.438 52.381 0.00 0.00 0.00 2.40
608 609 2.025887 CCTCCCTGCTAACCACATTCTT 60.026 50.000 0.00 0.00 0.00 2.52
609 610 3.274288 CTCCCTGCTAACCACATTCTTC 58.726 50.000 0.00 0.00 0.00 2.87
610 611 2.912956 TCCCTGCTAACCACATTCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
611 612 3.330701 TCCCTGCTAACCACATTCTTCTT 59.669 43.478 0.00 0.00 0.00 2.52
612 613 3.441572 CCCTGCTAACCACATTCTTCTTG 59.558 47.826 0.00 0.00 0.00 3.02
613 614 3.119708 CCTGCTAACCACATTCTTCTTGC 60.120 47.826 0.00 0.00 0.00 4.01
614 615 2.483877 TGCTAACCACATTCTTCTTGCG 59.516 45.455 0.00 0.00 0.00 4.85
615 616 2.159517 GCTAACCACATTCTTCTTGCGG 60.160 50.000 0.00 0.00 0.00 5.69
616 617 2.270352 AACCACATTCTTCTTGCGGA 57.730 45.000 0.00 0.00 0.00 5.54
617 618 2.496899 ACCACATTCTTCTTGCGGAT 57.503 45.000 0.00 0.00 0.00 4.18
618 619 3.627395 ACCACATTCTTCTTGCGGATA 57.373 42.857 0.00 0.00 0.00 2.59
619 620 3.535561 ACCACATTCTTCTTGCGGATAG 58.464 45.455 0.00 0.00 0.00 2.08
633 634 3.520290 CGGATAGCAGTACCAACTTCA 57.480 47.619 0.00 0.00 31.97 3.02
634 635 3.857052 CGGATAGCAGTACCAACTTCAA 58.143 45.455 0.00 0.00 31.97 2.69
635 636 4.250464 CGGATAGCAGTACCAACTTCAAA 58.750 43.478 0.00 0.00 31.97 2.69
636 637 4.693566 CGGATAGCAGTACCAACTTCAAAA 59.306 41.667 0.00 0.00 31.97 2.44
637 638 5.354234 CGGATAGCAGTACCAACTTCAAAAT 59.646 40.000 0.00 0.00 31.97 1.82
638 639 6.537301 CGGATAGCAGTACCAACTTCAAAATA 59.463 38.462 0.00 0.00 31.97 1.40
639 640 7.065324 CGGATAGCAGTACCAACTTCAAAATAA 59.935 37.037 0.00 0.00 31.97 1.40
640 641 8.736244 GGATAGCAGTACCAACTTCAAAATAAA 58.264 33.333 0.00 0.00 31.97 1.40
644 645 9.830975 AGCAGTACCAACTTCAAAATAAAATTT 57.169 25.926 0.00 0.00 31.97 1.82
650 651 8.567104 ACCAACTTCAAAATAAAATTTCATGCC 58.433 29.630 0.00 0.00 0.00 4.40
651 652 7.745594 CCAACTTCAAAATAAAATTTCATGCCG 59.254 33.333 0.00 0.00 0.00 5.69
652 653 8.494347 CAACTTCAAAATAAAATTTCATGCCGA 58.506 29.630 0.00 0.00 0.00 5.54
653 654 8.600449 ACTTCAAAATAAAATTTCATGCCGAA 57.400 26.923 0.00 0.00 0.00 4.30
654 655 9.218440 ACTTCAAAATAAAATTTCATGCCGAAT 57.782 25.926 0.00 0.00 32.32 3.34
657 658 9.868277 TCAAAATAAAATTTCATGCCGAATAGT 57.132 25.926 0.00 0.00 32.32 2.12
663 664 7.724305 AAATTTCATGCCGAATAGTATACGT 57.276 32.000 0.00 0.00 32.32 3.57
664 665 6.706055 ATTTCATGCCGAATAGTATACGTG 57.294 37.500 0.00 0.00 32.32 4.49
665 666 5.441709 TTCATGCCGAATAGTATACGTGA 57.558 39.130 0.00 0.00 0.00 4.35
666 667 5.043189 TCATGCCGAATAGTATACGTGAG 57.957 43.478 0.00 0.00 0.00 3.51
667 668 3.278367 TGCCGAATAGTATACGTGAGC 57.722 47.619 0.00 0.00 0.00 4.26
668 669 2.619646 TGCCGAATAGTATACGTGAGCA 59.380 45.455 0.00 1.17 0.00 4.26
669 670 3.254903 TGCCGAATAGTATACGTGAGCAT 59.745 43.478 0.00 0.00 0.00 3.79
676 677 8.584600 CGAATAGTATACGTGAGCATAAAATCC 58.415 37.037 0.00 0.00 0.00 3.01
682 683 2.539547 CGTGAGCATAAAATCCAAGCCG 60.540 50.000 0.00 0.00 0.00 5.52
689 690 5.185056 AGCATAAAATCCAAGCCGTTTTAGT 59.815 36.000 0.00 0.00 32.68 2.24
691 692 4.929819 AAAATCCAAGCCGTTTTAGTGT 57.070 36.364 0.00 0.00 0.00 3.55
730 731 9.015146 AGGAGATTTTGAGGGGTAGTATTATTT 57.985 33.333 0.00 0.00 0.00 1.40
828 2046 0.872881 CGGACGGTTTATAGCCCACG 60.873 60.000 0.00 0.00 0.00 4.94
839 2057 0.533491 TAGCCCACGAACGTATTGCT 59.467 50.000 16.65 16.65 32.72 3.91
873 2091 0.953471 CGCGTCAGTTTCAATCCCCA 60.953 55.000 0.00 0.00 0.00 4.96
876 2094 2.504367 CGTCAGTTTCAATCCCCACTT 58.496 47.619 0.00 0.00 0.00 3.16
878 2096 2.820197 GTCAGTTTCAATCCCCACTTCC 59.180 50.000 0.00 0.00 0.00 3.46
880 2098 1.077169 AGTTTCAATCCCCACTTCCCC 59.923 52.381 0.00 0.00 0.00 4.81
881 2099 1.077169 GTTTCAATCCCCACTTCCCCT 59.923 52.381 0.00 0.00 0.00 4.79
1137 2365 0.539669 TCTGCAGGTCGTCCTCTTCA 60.540 55.000 15.13 0.00 43.07 3.02
1188 2416 1.228490 ACTCACCGACGACCTCCTT 60.228 57.895 0.00 0.00 0.00 3.36
1189 2417 0.037303 ACTCACCGACGACCTCCTTA 59.963 55.000 0.00 0.00 0.00 2.69
1333 2573 2.020836 CTACGACGCGGGTCAATTGC 62.021 60.000 29.06 5.12 43.61 3.56
1349 2589 5.645497 GTCAATTGCTAGATTCAGGTGTTCT 59.355 40.000 0.00 0.00 0.00 3.01
1430 2670 2.614229 GGCTGGTCTTTCTCTTGGACTC 60.614 54.545 0.00 0.00 0.00 3.36
1435 2675 1.625818 TCTTTCTCTTGGACTCCTGCC 59.374 52.381 0.00 0.00 0.00 4.85
1486 2727 4.492160 GCGACCATGGCGACGAGA 62.492 66.667 26.00 0.00 0.00 4.04
1707 2969 1.003928 ACCGGGAGTTGGGTTCATAAC 59.996 52.381 6.32 0.00 30.73 1.89
1749 3011 6.128200 GCAATATTGATGTCGCTAATGATCCA 60.128 38.462 19.73 0.00 0.00 3.41
1812 3074 4.467084 GATGGTTCTGCCCGCCGA 62.467 66.667 0.00 0.00 36.04 5.54
1838 3103 2.936032 AGTGGACAAGGAGGGGGC 60.936 66.667 0.00 0.00 0.00 5.80
1955 3229 6.038936 GGTGACAATGATGATGATGTTGATCA 59.961 38.462 0.00 0.00 42.92 2.92
1964 3238 5.981174 TGATGATGTTGATCAACTGCTAGA 58.019 37.500 32.57 16.42 42.02 2.43
2193 3471 6.497785 AAAGTGATCTGCAATCTTGAAGAG 57.502 37.500 6.75 0.00 45.67 2.85
2347 3771 6.095432 TGTATGCATGCTTTTAAGTTTGGT 57.905 33.333 20.33 0.00 0.00 3.67
2428 3857 7.649306 TCAAAGTTTCAATTTAGCTTCTCTTGC 59.351 33.333 0.00 0.00 0.00 4.01
2470 3899 8.319057 TCTGTATACCAATGGTTCTAGACAAT 57.681 34.615 11.41 0.00 37.09 2.71
2603 4045 7.093640 ACAATGATGCTGTTGATAGGAAATGTT 60.094 33.333 0.00 0.00 0.00 2.71
2666 4108 5.552870 TTGCTTCAGAAGACTAGGAAGTT 57.447 39.130 14.86 0.00 39.10 2.66
2738 4188 4.883585 AGAGATTAAAATGAGCAATGCCGA 59.116 37.500 0.00 0.00 0.00 5.54
2897 7542 4.130857 AGATTCATGCTGAGAAGCTCATG 58.869 43.478 4.80 4.80 37.14 3.07
2994 7646 5.118990 TCTTATGCACATTCAGGAGCTTAC 58.881 41.667 0.00 0.00 0.00 2.34
3095 7748 2.696707 TCTCGTACTGGTCCTTTGTGTT 59.303 45.455 0.00 0.00 0.00 3.32
3150 7804 6.150976 CACCCTGTATTCAGCAAGATTGTAAA 59.849 38.462 0.00 0.00 40.09 2.01
3207 7862 9.014297 AGGAAATGAGAAAATACTTGGTACTTG 57.986 33.333 0.00 0.00 0.00 3.16
3219 7874 2.833794 TGGTACTTGTTGAGACTGCAC 58.166 47.619 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 8.031277 GCCATTTTGAGATACTTCTTGTGAATT 58.969 33.333 0.00 0.00 30.30 2.17
15 16 7.177216 TGCCATTTTGAGATACTTCTTGTGAAT 59.823 33.333 0.00 0.00 30.30 2.57
16 17 6.489700 TGCCATTTTGAGATACTTCTTGTGAA 59.510 34.615 0.00 0.00 30.30 3.18
17 18 6.003326 TGCCATTTTGAGATACTTCTTGTGA 58.997 36.000 0.00 0.00 30.30 3.58
18 19 6.258230 TGCCATTTTGAGATACTTCTTGTG 57.742 37.500 0.00 0.00 30.30 3.33
19 20 6.899393 TTGCCATTTTGAGATACTTCTTGT 57.101 33.333 0.00 0.00 30.30 3.16
36 37 9.466497 CAGGAAAGGTTATGTATATATTGCCAT 57.534 33.333 0.00 0.00 0.00 4.40
37 38 7.888021 CCAGGAAAGGTTATGTATATATTGCCA 59.112 37.037 0.00 0.00 0.00 4.92
38 39 7.148069 GCCAGGAAAGGTTATGTATATATTGCC 60.148 40.741 0.00 0.00 0.00 4.52
39 40 7.414098 CGCCAGGAAAGGTTATGTATATATTGC 60.414 40.741 0.00 0.00 0.00 3.56
40 41 7.606456 ACGCCAGGAAAGGTTATGTATATATTG 59.394 37.037 0.00 0.00 0.00 1.90
41 42 7.686434 ACGCCAGGAAAGGTTATGTATATATT 58.314 34.615 0.00 0.00 0.00 1.28
42 43 7.253905 ACGCCAGGAAAGGTTATGTATATAT 57.746 36.000 0.00 0.00 0.00 0.86
43 44 6.295462 GGACGCCAGGAAAGGTTATGTATATA 60.295 42.308 0.00 0.00 0.00 0.86
44 45 5.512576 GGACGCCAGGAAAGGTTATGTATAT 60.513 44.000 0.00 0.00 0.00 0.86
45 46 4.202284 GGACGCCAGGAAAGGTTATGTATA 60.202 45.833 0.00 0.00 0.00 1.47
46 47 3.433173 GGACGCCAGGAAAGGTTATGTAT 60.433 47.826 0.00 0.00 0.00 2.29
47 48 2.093341 GGACGCCAGGAAAGGTTATGTA 60.093 50.000 0.00 0.00 0.00 2.29
48 49 1.339727 GGACGCCAGGAAAGGTTATGT 60.340 52.381 0.00 0.00 0.00 2.29
49 50 1.379527 GGACGCCAGGAAAGGTTATG 58.620 55.000 0.00 0.00 0.00 1.90
50 51 0.255033 GGGACGCCAGGAAAGGTTAT 59.745 55.000 0.00 0.00 0.00 1.89
51 52 1.681076 GGGACGCCAGGAAAGGTTA 59.319 57.895 0.00 0.00 0.00 2.85
52 53 2.434774 GGGACGCCAGGAAAGGTT 59.565 61.111 0.00 0.00 0.00 3.50
53 54 3.647771 GGGGACGCCAGGAAAGGT 61.648 66.667 3.14 0.00 0.00 3.50
54 55 2.499303 AATGGGGACGCCAGGAAAGG 62.499 60.000 17.16 0.00 0.00 3.11
55 56 1.000896 AATGGGGACGCCAGGAAAG 60.001 57.895 17.16 0.00 0.00 2.62
56 57 1.001393 GAATGGGGACGCCAGGAAA 60.001 57.895 17.16 0.00 0.00 3.13
57 58 2.674754 GAATGGGGACGCCAGGAA 59.325 61.111 17.16 0.00 0.00 3.36
58 59 3.407967 GGAATGGGGACGCCAGGA 61.408 66.667 17.16 0.00 0.00 3.86
59 60 1.705002 TATGGAATGGGGACGCCAGG 61.705 60.000 17.16 0.00 33.12 4.45
60 61 0.401738 ATATGGAATGGGGACGCCAG 59.598 55.000 17.16 0.00 33.12 4.85
61 62 0.400213 GATATGGAATGGGGACGCCA 59.600 55.000 14.40 14.40 33.95 5.69
62 63 0.693049 AGATATGGAATGGGGACGCC 59.307 55.000 0.53 0.53 0.00 5.68
63 64 2.568623 AAGATATGGAATGGGGACGC 57.431 50.000 0.00 0.00 0.00 5.19
64 65 4.718961 AGAAAAGATATGGAATGGGGACG 58.281 43.478 0.00 0.00 0.00 4.79
65 66 8.712228 ATTAAGAAAAGATATGGAATGGGGAC 57.288 34.615 0.00 0.00 0.00 4.46
66 67 9.728100 AAATTAAGAAAAGATATGGAATGGGGA 57.272 29.630 0.00 0.00 0.00 4.81
67 68 9.768662 CAAATTAAGAAAAGATATGGAATGGGG 57.231 33.333 0.00 0.00 0.00 4.96
68 69 9.264719 GCAAATTAAGAAAAGATATGGAATGGG 57.735 33.333 0.00 0.00 0.00 4.00
118 119 9.759473 TGATATGACATAAGTGATCTCATAGGA 57.241 33.333 0.00 0.00 29.65 2.94
119 120 9.800433 GTGATATGACATAAGTGATCTCATAGG 57.200 37.037 0.00 0.00 29.98 2.57
122 123 8.868103 ACAGTGATATGACATAAGTGATCTCAT 58.132 33.333 0.00 0.00 29.98 2.90
123 124 8.242729 ACAGTGATATGACATAAGTGATCTCA 57.757 34.615 0.00 0.00 0.00 3.27
162 163 9.672673 AGTTGTAAAGATAGCAAAGTGTATCAT 57.327 29.630 0.00 0.00 0.00 2.45
169 170 9.819267 GGAGTATAGTTGTAAAGATAGCAAAGT 57.181 33.333 0.00 0.00 0.00 2.66
170 171 9.817809 TGGAGTATAGTTGTAAAGATAGCAAAG 57.182 33.333 0.00 0.00 0.00 2.77
172 173 9.817809 CTTGGAGTATAGTTGTAAAGATAGCAA 57.182 33.333 0.00 0.00 0.00 3.91
173 174 8.978472 ACTTGGAGTATAGTTGTAAAGATAGCA 58.022 33.333 0.00 0.00 0.00 3.49
183 184 9.690913 TGTACATAGTACTTGGAGTATAGTTGT 57.309 33.333 0.00 0.00 32.65 3.32
187 188 9.627395 GCAATGTACATAGTACTTGGAGTATAG 57.373 37.037 9.21 0.00 32.65 1.31
188 189 9.138596 TGCAATGTACATAGTACTTGGAGTATA 57.861 33.333 9.21 0.00 32.65 1.47
189 190 8.018537 TGCAATGTACATAGTACTTGGAGTAT 57.981 34.615 9.21 0.00 32.65 2.12
190 191 7.123697 ACTGCAATGTACATAGTACTTGGAGTA 59.876 37.037 22.45 3.25 41.46 2.59
191 192 6.070767 ACTGCAATGTACATAGTACTTGGAGT 60.071 38.462 19.78 19.78 39.45 3.85
192 193 6.341316 ACTGCAATGTACATAGTACTTGGAG 58.659 40.000 18.79 18.79 37.84 3.86
193 194 6.294361 ACTGCAATGTACATAGTACTTGGA 57.706 37.500 9.21 3.77 0.00 3.53
194 195 6.985188 AACTGCAATGTACATAGTACTTGG 57.015 37.500 9.21 0.00 0.00 3.61
229 230 9.110502 TGTTCGCATCGTAGATCTCTTATATAT 57.889 33.333 0.00 0.00 45.12 0.86
230 231 8.488651 TGTTCGCATCGTAGATCTCTTATATA 57.511 34.615 0.00 0.00 45.12 0.86
231 232 7.379098 TGTTCGCATCGTAGATCTCTTATAT 57.621 36.000 0.00 0.00 45.12 0.86
232 233 6.796705 TGTTCGCATCGTAGATCTCTTATA 57.203 37.500 0.00 0.00 45.12 0.98
233 234 5.690997 TGTTCGCATCGTAGATCTCTTAT 57.309 39.130 0.00 0.00 45.12 1.73
234 235 5.494632 TTGTTCGCATCGTAGATCTCTTA 57.505 39.130 0.00 0.00 45.12 2.10
235 236 4.371855 TTGTTCGCATCGTAGATCTCTT 57.628 40.909 0.00 0.00 45.12 2.85
236 237 4.371855 TTTGTTCGCATCGTAGATCTCT 57.628 40.909 0.00 0.00 45.12 3.10
237 238 5.643339 AATTTGTTCGCATCGTAGATCTC 57.357 39.130 0.00 0.00 45.12 2.75
238 239 6.757010 ACTAAATTTGTTCGCATCGTAGATCT 59.243 34.615 0.00 0.00 45.12 2.75
239 240 6.934210 ACTAAATTTGTTCGCATCGTAGATC 58.066 36.000 0.00 0.00 45.12 2.75
240 241 6.533723 TGACTAAATTTGTTCGCATCGTAGAT 59.466 34.615 0.00 0.00 45.12 1.98
241 242 5.865013 TGACTAAATTTGTTCGCATCGTAGA 59.135 36.000 0.00 0.00 45.75 2.59
242 243 6.089920 TGACTAAATTTGTTCGCATCGTAG 57.910 37.500 0.00 0.00 0.00 3.51
243 244 6.146510 AGTTGACTAAATTTGTTCGCATCGTA 59.853 34.615 0.00 0.00 0.00 3.43
244 245 5.049680 AGTTGACTAAATTTGTTCGCATCGT 60.050 36.000 0.00 0.00 0.00 3.73
245 246 5.382303 AGTTGACTAAATTTGTTCGCATCG 58.618 37.500 0.00 0.00 0.00 3.84
246 247 8.895932 ATAAGTTGACTAAATTTGTTCGCATC 57.104 30.769 0.00 0.00 0.00 3.91
271 272 9.470399 TCTTGGTCCTATGCGTATAAGAATATA 57.530 33.333 0.00 0.00 0.00 0.86
272 273 8.362464 TCTTGGTCCTATGCGTATAAGAATAT 57.638 34.615 0.00 0.00 0.00 1.28
273 274 7.450634 ACTCTTGGTCCTATGCGTATAAGAATA 59.549 37.037 0.00 0.00 0.00 1.75
274 275 6.267928 ACTCTTGGTCCTATGCGTATAAGAAT 59.732 38.462 0.00 0.00 0.00 2.40
275 276 5.597182 ACTCTTGGTCCTATGCGTATAAGAA 59.403 40.000 0.00 0.00 0.00 2.52
276 277 5.138276 ACTCTTGGTCCTATGCGTATAAGA 58.862 41.667 0.00 0.00 0.00 2.10
277 278 5.455056 ACTCTTGGTCCTATGCGTATAAG 57.545 43.478 0.00 0.00 0.00 1.73
278 279 5.864418 AACTCTTGGTCCTATGCGTATAA 57.136 39.130 0.00 0.00 0.00 0.98
279 280 5.597182 AGAAACTCTTGGTCCTATGCGTATA 59.403 40.000 0.00 0.00 0.00 1.47
280 281 4.406003 AGAAACTCTTGGTCCTATGCGTAT 59.594 41.667 0.00 0.00 0.00 3.06
281 282 3.767673 AGAAACTCTTGGTCCTATGCGTA 59.232 43.478 0.00 0.00 0.00 4.42
282 283 2.567615 AGAAACTCTTGGTCCTATGCGT 59.432 45.455 0.00 0.00 0.00 5.24
283 284 2.932614 CAGAAACTCTTGGTCCTATGCG 59.067 50.000 0.00 0.00 0.00 4.73
284 285 3.944087 ACAGAAACTCTTGGTCCTATGC 58.056 45.455 0.00 0.00 0.00 3.14
285 286 5.112686 GCTACAGAAACTCTTGGTCCTATG 58.887 45.833 0.00 0.00 0.00 2.23
286 287 4.777896 TGCTACAGAAACTCTTGGTCCTAT 59.222 41.667 0.00 0.00 0.00 2.57
287 288 4.157246 TGCTACAGAAACTCTTGGTCCTA 58.843 43.478 0.00 0.00 0.00 2.94
288 289 2.972713 TGCTACAGAAACTCTTGGTCCT 59.027 45.455 0.00 0.00 0.00 3.85
289 290 3.402628 TGCTACAGAAACTCTTGGTCC 57.597 47.619 0.00 0.00 0.00 4.46
290 291 3.184581 CGTTGCTACAGAAACTCTTGGTC 59.815 47.826 0.00 0.00 31.29 4.02
291 292 3.131396 CGTTGCTACAGAAACTCTTGGT 58.869 45.455 0.00 0.00 31.29 3.67
292 293 2.096218 GCGTTGCTACAGAAACTCTTGG 60.096 50.000 0.00 0.00 31.29 3.61
293 294 2.410262 CGCGTTGCTACAGAAACTCTTG 60.410 50.000 0.00 0.00 31.29 3.02
294 295 1.792949 CGCGTTGCTACAGAAACTCTT 59.207 47.619 0.00 0.00 31.29 2.85
295 296 1.419374 CGCGTTGCTACAGAAACTCT 58.581 50.000 0.00 0.00 31.29 3.24
296 297 0.179248 GCGCGTTGCTACAGAAACTC 60.179 55.000 8.43 0.00 41.73 3.01
297 298 0.878523 TGCGCGTTGCTACAGAAACT 60.879 50.000 8.43 0.00 46.63 2.66
298 299 0.451135 CTGCGCGTTGCTACAGAAAC 60.451 55.000 8.43 0.00 46.63 2.78
299 300 1.565156 CCTGCGCGTTGCTACAGAAA 61.565 55.000 8.43 0.00 46.63 2.52
300 301 2.027073 CCTGCGCGTTGCTACAGAA 61.027 57.895 8.43 0.00 46.63 3.02
301 302 2.432456 CCTGCGCGTTGCTACAGA 60.432 61.111 8.43 0.00 46.63 3.41
302 303 2.829043 TACCCTGCGCGTTGCTACAG 62.829 60.000 8.43 4.96 46.63 2.74
303 304 2.233605 ATACCCTGCGCGTTGCTACA 62.234 55.000 8.43 0.00 46.63 2.74
304 305 1.488261 GATACCCTGCGCGTTGCTAC 61.488 60.000 8.43 0.00 46.63 3.58
305 306 1.227147 GATACCCTGCGCGTTGCTA 60.227 57.895 8.43 0.00 46.63 3.49
306 307 2.511600 GATACCCTGCGCGTTGCT 60.512 61.111 8.43 0.00 46.63 3.91
307 308 2.105960 GATGATACCCTGCGCGTTGC 62.106 60.000 8.43 0.00 46.70 4.17
308 309 0.530650 AGATGATACCCTGCGCGTTG 60.531 55.000 8.43 0.00 0.00 4.10
309 310 1.000163 CTAGATGATACCCTGCGCGTT 60.000 52.381 8.43 0.00 0.00 4.84
310 311 0.598562 CTAGATGATACCCTGCGCGT 59.401 55.000 8.43 0.00 0.00 6.01
311 312 0.598562 ACTAGATGATACCCTGCGCG 59.401 55.000 0.00 0.00 0.00 6.86
312 313 2.821991 AACTAGATGATACCCTGCGC 57.178 50.000 0.00 0.00 0.00 6.09
313 314 8.304596 TCTATTAAAACTAGATGATACCCTGCG 58.695 37.037 0.00 0.00 0.00 5.18
314 315 9.646427 CTCTATTAAAACTAGATGATACCCTGC 57.354 37.037 0.00 0.00 0.00 4.85
316 317 9.327731 CCCTCTATTAAAACTAGATGATACCCT 57.672 37.037 0.00 0.00 0.00 4.34
317 318 8.041919 GCCCTCTATTAAAACTAGATGATACCC 58.958 40.741 0.00 0.00 0.00 3.69
318 319 8.594550 TGCCCTCTATTAAAACTAGATGATACC 58.405 37.037 0.00 0.00 0.00 2.73
319 320 9.425577 GTGCCCTCTATTAAAACTAGATGATAC 57.574 37.037 0.00 0.00 0.00 2.24
320 321 8.304596 CGTGCCCTCTATTAAAACTAGATGATA 58.695 37.037 0.00 0.00 0.00 2.15
321 322 7.155328 CGTGCCCTCTATTAAAACTAGATGAT 58.845 38.462 0.00 0.00 0.00 2.45
322 323 6.097839 ACGTGCCCTCTATTAAAACTAGATGA 59.902 38.462 0.00 0.00 0.00 2.92
323 324 6.201044 CACGTGCCCTCTATTAAAACTAGATG 59.799 42.308 0.82 0.00 0.00 2.90
324 325 6.281405 CACGTGCCCTCTATTAAAACTAGAT 58.719 40.000 0.82 0.00 0.00 1.98
325 326 5.657474 CACGTGCCCTCTATTAAAACTAGA 58.343 41.667 0.82 0.00 0.00 2.43
326 327 4.270325 GCACGTGCCCTCTATTAAAACTAG 59.730 45.833 30.12 0.00 34.31 2.57
327 328 4.186159 GCACGTGCCCTCTATTAAAACTA 58.814 43.478 30.12 0.00 34.31 2.24
328 329 3.007635 GCACGTGCCCTCTATTAAAACT 58.992 45.455 30.12 0.00 34.31 2.66
329 330 2.745281 TGCACGTGCCCTCTATTAAAAC 59.255 45.455 35.72 5.59 41.18 2.43
330 331 3.060736 TGCACGTGCCCTCTATTAAAA 57.939 42.857 35.72 11.40 41.18 1.52
331 332 2.772077 TGCACGTGCCCTCTATTAAA 57.228 45.000 35.72 11.96 41.18 1.52
332 333 2.627945 CTTGCACGTGCCCTCTATTAA 58.372 47.619 35.72 19.92 41.18 1.40
333 334 1.134521 CCTTGCACGTGCCCTCTATTA 60.135 52.381 35.72 13.53 41.18 0.98
334 335 0.392998 CCTTGCACGTGCCCTCTATT 60.393 55.000 35.72 0.00 41.18 1.73
335 336 1.221840 CCTTGCACGTGCCCTCTAT 59.778 57.895 35.72 0.00 41.18 1.98
336 337 2.662596 CCTTGCACGTGCCCTCTA 59.337 61.111 35.72 15.93 41.18 2.43
347 348 0.178967 TTTCATGAGGGTGCCTTGCA 60.179 50.000 0.00 0.00 31.76 4.08
348 349 0.244721 GTTTCATGAGGGTGCCTTGC 59.755 55.000 0.00 0.00 31.76 4.01
349 350 0.890683 GGTTTCATGAGGGTGCCTTG 59.109 55.000 0.00 0.00 31.76 3.61
350 351 0.779997 AGGTTTCATGAGGGTGCCTT 59.220 50.000 0.00 0.00 31.76 4.35
351 352 0.329596 GAGGTTTCATGAGGGTGCCT 59.670 55.000 0.00 0.57 36.03 4.75
352 353 0.329596 AGAGGTTTCATGAGGGTGCC 59.670 55.000 0.00 0.00 0.00 5.01
353 354 2.206576 AAGAGGTTTCATGAGGGTGC 57.793 50.000 0.00 0.00 0.00 5.01
354 355 2.744202 CGAAAGAGGTTTCATGAGGGTG 59.256 50.000 0.00 0.00 42.06 4.61
355 356 2.637872 TCGAAAGAGGTTTCATGAGGGT 59.362 45.455 0.00 0.00 42.06 4.34
356 357 3.334583 TCGAAAGAGGTTTCATGAGGG 57.665 47.619 0.00 0.00 42.06 4.30
370 371 6.584954 CACGCTCCAATAATTCTATCGAAAG 58.415 40.000 0.00 0.00 31.91 2.62
371 372 5.050363 GCACGCTCCAATAATTCTATCGAAA 60.050 40.000 0.00 0.00 31.91 3.46
372 373 4.447724 GCACGCTCCAATAATTCTATCGAA 59.552 41.667 0.00 0.00 0.00 3.71
373 374 3.987868 GCACGCTCCAATAATTCTATCGA 59.012 43.478 0.00 0.00 0.00 3.59
374 375 3.740832 TGCACGCTCCAATAATTCTATCG 59.259 43.478 0.00 0.00 0.00 2.92
375 376 5.334414 CCTTGCACGCTCCAATAATTCTATC 60.334 44.000 0.00 0.00 0.00 2.08
376 377 4.516698 CCTTGCACGCTCCAATAATTCTAT 59.483 41.667 0.00 0.00 0.00 1.98
377 378 3.876914 CCTTGCACGCTCCAATAATTCTA 59.123 43.478 0.00 0.00 0.00 2.10
378 379 2.684881 CCTTGCACGCTCCAATAATTCT 59.315 45.455 0.00 0.00 0.00 2.40
379 380 2.223572 CCCTTGCACGCTCCAATAATTC 60.224 50.000 0.00 0.00 0.00 2.17
380 381 1.750778 CCCTTGCACGCTCCAATAATT 59.249 47.619 0.00 0.00 0.00 1.40
381 382 1.392589 CCCTTGCACGCTCCAATAAT 58.607 50.000 0.00 0.00 0.00 1.28
382 383 0.679640 CCCCTTGCACGCTCCAATAA 60.680 55.000 0.00 0.00 0.00 1.40
383 384 1.077787 CCCCTTGCACGCTCCAATA 60.078 57.895 0.00 0.00 0.00 1.90
384 385 2.361610 CCCCTTGCACGCTCCAAT 60.362 61.111 0.00 0.00 0.00 3.16
395 396 0.527565 GTACAGTGCAATGCCCCTTG 59.472 55.000 15.18 0.00 0.00 3.61
396 397 0.611896 GGTACAGTGCAATGCCCCTT 60.612 55.000 15.18 0.00 0.00 3.95
397 398 1.000896 GGTACAGTGCAATGCCCCT 60.001 57.895 15.18 0.00 0.00 4.79
398 399 1.304052 TGGTACAGTGCAATGCCCC 60.304 57.895 15.18 14.45 0.00 5.80
399 400 4.413928 TGGTACAGTGCAATGCCC 57.586 55.556 15.18 14.82 0.00 5.36
404 405 9.672670 ATCGAAGAAGATGATGGTACAGTGCAA 62.673 40.741 0.00 0.00 42.61 4.08
405 406 8.302595 ATCGAAGAAGATGATGGTACAGTGCA 62.303 42.308 0.00 0.00 42.61 4.57
406 407 5.966555 ATCGAAGAAGATGATGGTACAGTGC 60.967 44.000 0.00 0.00 42.61 4.40
407 408 5.595885 ATCGAAGAAGATGATGGTACAGTG 58.404 41.667 0.00 0.00 42.61 3.66
408 409 5.860941 ATCGAAGAAGATGATGGTACAGT 57.139 39.130 0.00 0.00 42.61 3.55
409 410 7.168302 GTGTTATCGAAGAAGATGATGGTACAG 59.832 40.741 0.00 0.00 42.61 2.74
410 411 6.978659 GTGTTATCGAAGAAGATGATGGTACA 59.021 38.462 0.00 0.00 43.65 2.90
411 412 6.978659 TGTGTTATCGAAGAAGATGATGGTAC 59.021 38.462 0.00 0.00 43.58 3.34
412 413 7.107639 TGTGTTATCGAAGAAGATGATGGTA 57.892 36.000 0.00 0.00 43.58 3.25
413 414 5.977635 TGTGTTATCGAAGAAGATGATGGT 58.022 37.500 0.00 0.00 43.58 3.55
414 415 6.908870 TTGTGTTATCGAAGAAGATGATGG 57.091 37.500 0.00 0.00 43.58 3.51
415 416 7.065085 AGGTTTGTGTTATCGAAGAAGATGATG 59.935 37.037 0.00 0.00 43.58 3.07
416 417 7.106239 AGGTTTGTGTTATCGAAGAAGATGAT 58.894 34.615 0.00 0.00 43.58 2.45
417 418 6.464222 AGGTTTGTGTTATCGAAGAAGATGA 58.536 36.000 0.00 0.00 43.58 2.92
418 419 6.591834 AGAGGTTTGTGTTATCGAAGAAGATG 59.408 38.462 0.00 0.00 43.58 2.90
419 420 6.702329 AGAGGTTTGTGTTATCGAAGAAGAT 58.298 36.000 0.00 0.00 43.58 2.40
420 421 6.097915 AGAGGTTTGTGTTATCGAAGAAGA 57.902 37.500 0.00 0.00 43.58 2.87
421 422 6.787085 AAGAGGTTTGTGTTATCGAAGAAG 57.213 37.500 0.00 0.00 43.58 2.85
422 423 8.665643 TTAAAGAGGTTTGTGTTATCGAAGAA 57.334 30.769 0.00 0.00 43.58 2.52
423 424 8.665643 TTTAAAGAGGTTTGTGTTATCGAAGA 57.334 30.769 0.00 0.00 45.75 2.87
426 427 9.932207 TCTATTTAAAGAGGTTTGTGTTATCGA 57.068 29.630 9.85 0.00 0.00 3.59
431 432 9.740710 AGCTATCTATTTAAAGAGGTTTGTGTT 57.259 29.630 9.85 0.00 0.00 3.32
432 433 9.384764 GAGCTATCTATTTAAAGAGGTTTGTGT 57.615 33.333 9.85 0.00 0.00 3.72
433 434 8.831550 GGAGCTATCTATTTAAAGAGGTTTGTG 58.168 37.037 9.85 0.00 0.00 3.33
434 435 7.711339 CGGAGCTATCTATTTAAAGAGGTTTGT 59.289 37.037 9.85 0.00 0.00 2.83
435 436 7.711339 ACGGAGCTATCTATTTAAAGAGGTTTG 59.289 37.037 9.85 1.56 0.00 2.93
436 437 7.793036 ACGGAGCTATCTATTTAAAGAGGTTT 58.207 34.615 9.85 0.00 0.00 3.27
437 438 7.362802 ACGGAGCTATCTATTTAAAGAGGTT 57.637 36.000 9.85 1.51 0.00 3.50
438 439 6.015265 GGACGGAGCTATCTATTTAAAGAGGT 60.015 42.308 9.85 5.43 0.00 3.85
439 440 6.015350 TGGACGGAGCTATCTATTTAAAGAGG 60.015 42.308 9.85 0.00 0.00 3.69
440 441 6.982852 TGGACGGAGCTATCTATTTAAAGAG 58.017 40.000 3.35 3.35 0.00 2.85
441 442 6.971726 TGGACGGAGCTATCTATTTAAAGA 57.028 37.500 0.00 0.00 0.00 2.52
442 443 9.877178 ATATTGGACGGAGCTATCTATTTAAAG 57.123 33.333 0.00 0.00 0.00 1.85
443 444 9.653287 CATATTGGACGGAGCTATCTATTTAAA 57.347 33.333 0.00 0.00 0.00 1.52
444 445 9.031537 TCATATTGGACGGAGCTATCTATTTAA 57.968 33.333 0.00 0.00 0.00 1.52
445 446 8.589701 TCATATTGGACGGAGCTATCTATTTA 57.410 34.615 0.00 0.00 0.00 1.40
446 447 7.482169 TCATATTGGACGGAGCTATCTATTT 57.518 36.000 0.00 0.00 0.00 1.40
447 448 6.406400 GCTCATATTGGACGGAGCTATCTATT 60.406 42.308 5.31 0.00 46.95 1.73
448 449 5.068460 GCTCATATTGGACGGAGCTATCTAT 59.932 44.000 5.31 0.00 46.95 1.98
449 450 4.399618 GCTCATATTGGACGGAGCTATCTA 59.600 45.833 5.31 0.00 46.95 1.98
450 451 3.194542 GCTCATATTGGACGGAGCTATCT 59.805 47.826 5.31 0.00 46.95 1.98
451 452 3.516615 GCTCATATTGGACGGAGCTATC 58.483 50.000 5.31 0.00 46.95 2.08
452 453 3.601443 GCTCATATTGGACGGAGCTAT 57.399 47.619 5.31 0.00 46.95 2.97
454 455 3.997672 GCTCATATTGGACGGAGCT 57.002 52.632 5.31 0.00 46.95 4.09
456 457 3.068732 TCTCAAGCTCATATTGGACGGAG 59.931 47.826 0.00 0.00 0.00 4.63
457 458 3.031013 TCTCAAGCTCATATTGGACGGA 58.969 45.455 0.00 0.00 0.00 4.69
458 459 3.459232 TCTCAAGCTCATATTGGACGG 57.541 47.619 0.00 0.00 0.00 4.79
459 460 3.744942 CCATCTCAAGCTCATATTGGACG 59.255 47.826 0.00 0.00 0.00 4.79
460 461 4.754114 GTCCATCTCAAGCTCATATTGGAC 59.246 45.833 17.22 17.22 43.43 4.02
461 462 4.657504 AGTCCATCTCAAGCTCATATTGGA 59.342 41.667 4.13 4.13 0.00 3.53
462 463 4.970711 AGTCCATCTCAAGCTCATATTGG 58.029 43.478 0.00 0.00 0.00 3.16
463 464 4.685165 CGAGTCCATCTCAAGCTCATATTG 59.315 45.833 0.00 0.00 42.88 1.90
464 465 4.343526 ACGAGTCCATCTCAAGCTCATATT 59.656 41.667 0.00 0.00 42.88 1.28
465 466 3.894427 ACGAGTCCATCTCAAGCTCATAT 59.106 43.478 0.00 0.00 42.88 1.78
466 467 3.291584 ACGAGTCCATCTCAAGCTCATA 58.708 45.455 0.00 0.00 42.88 2.15
467 468 2.106566 ACGAGTCCATCTCAAGCTCAT 58.893 47.619 0.00 0.00 42.88 2.90
468 469 1.550327 ACGAGTCCATCTCAAGCTCA 58.450 50.000 0.00 0.00 42.88 4.26
469 470 2.094494 TGAACGAGTCCATCTCAAGCTC 60.094 50.000 0.00 0.00 42.88 4.09
470 471 1.895798 TGAACGAGTCCATCTCAAGCT 59.104 47.619 0.00 0.00 42.88 3.74
471 472 2.370281 TGAACGAGTCCATCTCAAGC 57.630 50.000 0.00 0.00 42.88 4.01
472 473 3.919216 ACTTGAACGAGTCCATCTCAAG 58.081 45.455 11.06 11.06 42.11 3.02
473 474 4.058124 CAACTTGAACGAGTCCATCTCAA 58.942 43.478 0.00 0.00 42.88 3.02
474 475 3.554960 CCAACTTGAACGAGTCCATCTCA 60.555 47.826 0.00 0.00 42.88 3.27
475 476 2.996621 CCAACTTGAACGAGTCCATCTC 59.003 50.000 0.00 0.00 39.62 2.75
476 477 2.368875 ACCAACTTGAACGAGTCCATCT 59.631 45.455 0.00 0.00 0.00 2.90
477 478 2.767505 ACCAACTTGAACGAGTCCATC 58.232 47.619 0.00 0.00 0.00 3.51
478 479 2.930826 ACCAACTTGAACGAGTCCAT 57.069 45.000 0.00 0.00 0.00 3.41
479 480 2.696707 AGTACCAACTTGAACGAGTCCA 59.303 45.455 0.00 0.00 29.00 4.02
480 481 3.057734 CAGTACCAACTTGAACGAGTCC 58.942 50.000 0.00 0.00 31.97 3.85
481 482 3.057734 CCAGTACCAACTTGAACGAGTC 58.942 50.000 0.00 0.00 31.97 3.36
482 483 2.696707 TCCAGTACCAACTTGAACGAGT 59.303 45.455 0.00 0.00 31.97 4.18
483 484 3.318017 CTCCAGTACCAACTTGAACGAG 58.682 50.000 0.00 0.00 31.97 4.18
484 485 2.547218 GCTCCAGTACCAACTTGAACGA 60.547 50.000 0.00 0.00 31.97 3.85
485 486 1.798813 GCTCCAGTACCAACTTGAACG 59.201 52.381 0.00 0.00 31.97 3.95
486 487 3.127425 AGCTCCAGTACCAACTTGAAC 57.873 47.619 0.00 0.00 31.97 3.18
487 488 4.504340 GGTTAGCTCCAGTACCAACTTGAA 60.504 45.833 0.00 0.00 31.97 2.69
488 489 3.007614 GGTTAGCTCCAGTACCAACTTGA 59.992 47.826 0.00 0.00 31.97 3.02
489 490 3.244422 TGGTTAGCTCCAGTACCAACTTG 60.244 47.826 0.00 0.00 37.71 3.16
490 491 2.976882 TGGTTAGCTCCAGTACCAACTT 59.023 45.455 0.00 0.00 37.71 2.66
491 492 2.616524 TGGTTAGCTCCAGTACCAACT 58.383 47.619 0.00 0.00 37.71 3.16
492 493 3.270877 CATGGTTAGCTCCAGTACCAAC 58.729 50.000 0.00 0.00 43.35 3.77
493 494 2.355716 GCATGGTTAGCTCCAGTACCAA 60.356 50.000 0.00 0.00 43.35 3.67
494 495 1.209504 GCATGGTTAGCTCCAGTACCA 59.790 52.381 0.00 0.00 44.17 3.25
495 496 1.209504 TGCATGGTTAGCTCCAGTACC 59.790 52.381 0.00 0.00 41.05 3.34
496 497 2.691409 TGCATGGTTAGCTCCAGTAC 57.309 50.000 0.00 0.00 41.05 2.73
497 498 3.244735 TGTTTGCATGGTTAGCTCCAGTA 60.245 43.478 0.00 0.00 41.05 2.74
498 499 2.162681 GTTTGCATGGTTAGCTCCAGT 58.837 47.619 0.00 0.00 41.05 4.00
499 500 2.161855 TGTTTGCATGGTTAGCTCCAG 58.838 47.619 0.00 0.00 41.05 3.86
500 501 2.284754 TGTTTGCATGGTTAGCTCCA 57.715 45.000 0.00 0.00 42.01 3.86
501 502 2.754552 TGATGTTTGCATGGTTAGCTCC 59.245 45.455 0.00 0.00 35.07 4.70
502 503 4.168760 GTTGATGTTTGCATGGTTAGCTC 58.831 43.478 0.00 0.00 35.07 4.09
503 504 3.573538 TGTTGATGTTTGCATGGTTAGCT 59.426 39.130 0.00 0.00 35.07 3.32
504 505 3.911868 TGTTGATGTTTGCATGGTTAGC 58.088 40.909 0.00 0.00 35.07 3.09
505 506 8.028354 TCTTAATGTTGATGTTTGCATGGTTAG 58.972 33.333 0.00 0.00 35.07 2.34
506 507 7.890515 TCTTAATGTTGATGTTTGCATGGTTA 58.109 30.769 0.00 0.00 35.07 2.85
507 508 6.757237 TCTTAATGTTGATGTTTGCATGGTT 58.243 32.000 0.00 0.00 35.07 3.67
508 509 6.343716 TCTTAATGTTGATGTTTGCATGGT 57.656 33.333 0.00 0.00 35.07 3.55
509 510 7.201574 CCAATCTTAATGTTGATGTTTGCATGG 60.202 37.037 0.00 0.00 35.07 3.66
510 511 7.332430 ACCAATCTTAATGTTGATGTTTGCATG 59.668 33.333 0.00 0.00 35.07 4.06
511 512 7.388437 ACCAATCTTAATGTTGATGTTTGCAT 58.612 30.769 0.00 0.00 38.18 3.96
512 513 6.757237 ACCAATCTTAATGTTGATGTTTGCA 58.243 32.000 0.00 0.00 0.00 4.08
513 514 7.656707 AACCAATCTTAATGTTGATGTTTGC 57.343 32.000 2.50 0.00 0.00 3.68
515 516 9.927668 CCTTAACCAATCTTAATGTTGATGTTT 57.072 29.630 2.50 0.00 0.00 2.83
516 517 8.034804 GCCTTAACCAATCTTAATGTTGATGTT 58.965 33.333 2.50 0.00 0.00 2.71
517 518 7.397192 AGCCTTAACCAATCTTAATGTTGATGT 59.603 33.333 2.50 0.00 0.00 3.06
518 519 7.775120 AGCCTTAACCAATCTTAATGTTGATG 58.225 34.615 2.50 0.00 0.00 3.07
519 520 7.961326 AGCCTTAACCAATCTTAATGTTGAT 57.039 32.000 2.50 0.00 0.00 2.57
520 521 7.775053 AAGCCTTAACCAATCTTAATGTTGA 57.225 32.000 2.50 0.00 0.00 3.18
521 522 8.711457 CAAAAGCCTTAACCAATCTTAATGTTG 58.289 33.333 0.00 0.00 0.00 3.33
522 523 7.877612 CCAAAAGCCTTAACCAATCTTAATGTT 59.122 33.333 0.00 0.00 0.00 2.71
523 524 7.386059 CCAAAAGCCTTAACCAATCTTAATGT 58.614 34.615 0.00 0.00 0.00 2.71
524 525 6.313658 GCCAAAAGCCTTAACCAATCTTAATG 59.686 38.462 0.00 0.00 34.35 1.90
525 526 6.213397 AGCCAAAAGCCTTAACCAATCTTAAT 59.787 34.615 0.00 0.00 45.47 1.40
526 527 5.542251 AGCCAAAAGCCTTAACCAATCTTAA 59.458 36.000 0.00 0.00 45.47 1.85
527 528 5.083821 AGCCAAAAGCCTTAACCAATCTTA 58.916 37.500 0.00 0.00 45.47 2.10
528 529 3.903714 AGCCAAAAGCCTTAACCAATCTT 59.096 39.130 0.00 0.00 45.47 2.40
529 530 3.510459 AGCCAAAAGCCTTAACCAATCT 58.490 40.909 0.00 0.00 45.47 2.40
530 531 3.961480 AGCCAAAAGCCTTAACCAATC 57.039 42.857 0.00 0.00 45.47 2.67
531 532 4.705110 AAAGCCAAAAGCCTTAACCAAT 57.295 36.364 0.00 0.00 45.47 3.16
532 533 4.163268 AGAAAAGCCAAAAGCCTTAACCAA 59.837 37.500 0.00 0.00 45.47 3.67
533 534 3.709141 AGAAAAGCCAAAAGCCTTAACCA 59.291 39.130 0.00 0.00 45.47 3.67
534 535 4.336889 AGAAAAGCCAAAAGCCTTAACC 57.663 40.909 0.00 0.00 45.47 2.85
535 536 6.100004 GGATAGAAAAGCCAAAAGCCTTAAC 58.900 40.000 0.00 0.00 45.47 2.01
536 537 5.186992 GGGATAGAAAAGCCAAAAGCCTTAA 59.813 40.000 0.00 0.00 45.47 1.85
537 538 4.709886 GGGATAGAAAAGCCAAAAGCCTTA 59.290 41.667 0.00 0.00 45.47 2.69
538 539 3.515502 GGGATAGAAAAGCCAAAAGCCTT 59.484 43.478 0.00 0.00 45.47 4.35
539 540 3.099905 GGGATAGAAAAGCCAAAAGCCT 58.900 45.455 0.00 0.00 45.47 4.58
540 541 2.831526 TGGGATAGAAAAGCCAAAAGCC 59.168 45.455 0.00 0.00 45.47 4.35
541 542 4.743057 ATGGGATAGAAAAGCCAAAAGC 57.257 40.909 0.00 0.00 44.25 3.51
542 543 5.733373 GCGTATGGGATAGAAAAGCCAAAAG 60.733 44.000 0.00 0.00 0.00 2.27
543 544 4.097286 GCGTATGGGATAGAAAAGCCAAAA 59.903 41.667 0.00 0.00 0.00 2.44
544 545 3.630312 GCGTATGGGATAGAAAAGCCAAA 59.370 43.478 0.00 0.00 0.00 3.28
545 546 3.118038 AGCGTATGGGATAGAAAAGCCAA 60.118 43.478 0.00 0.00 0.00 4.52
546 547 2.438021 AGCGTATGGGATAGAAAAGCCA 59.562 45.455 0.00 0.00 0.00 4.75
547 548 3.067833 GAGCGTATGGGATAGAAAAGCC 58.932 50.000 0.00 0.00 0.00 4.35
548 549 3.996480 AGAGCGTATGGGATAGAAAAGC 58.004 45.455 0.00 0.00 0.00 3.51
549 550 5.360591 ACAAGAGCGTATGGGATAGAAAAG 58.639 41.667 0.00 0.00 0.00 2.27
550 551 5.105106 TGACAAGAGCGTATGGGATAGAAAA 60.105 40.000 0.00 0.00 0.00 2.29
551 552 4.404394 TGACAAGAGCGTATGGGATAGAAA 59.596 41.667 0.00 0.00 0.00 2.52
552 553 3.958147 TGACAAGAGCGTATGGGATAGAA 59.042 43.478 0.00 0.00 0.00 2.10
553 554 3.318275 GTGACAAGAGCGTATGGGATAGA 59.682 47.826 0.00 0.00 0.00 1.98
554 555 3.068165 TGTGACAAGAGCGTATGGGATAG 59.932 47.826 0.00 0.00 0.00 2.08
555 556 3.028130 TGTGACAAGAGCGTATGGGATA 58.972 45.455 0.00 0.00 0.00 2.59
556 557 1.831106 TGTGACAAGAGCGTATGGGAT 59.169 47.619 0.00 0.00 0.00 3.85
557 558 1.262417 TGTGACAAGAGCGTATGGGA 58.738 50.000 0.00 0.00 0.00 4.37
558 559 1.935873 CATGTGACAAGAGCGTATGGG 59.064 52.381 0.00 0.00 0.00 4.00
559 560 2.892374 TCATGTGACAAGAGCGTATGG 58.108 47.619 0.00 0.00 0.00 2.74
560 561 4.926860 TTTCATGTGACAAGAGCGTATG 57.073 40.909 0.00 0.00 0.00 2.39
561 562 5.643348 TGATTTTCATGTGACAAGAGCGTAT 59.357 36.000 0.00 0.00 0.00 3.06
562 563 4.994217 TGATTTTCATGTGACAAGAGCGTA 59.006 37.500 0.00 0.00 0.00 4.42
563 564 3.814842 TGATTTTCATGTGACAAGAGCGT 59.185 39.130 0.00 0.00 0.00 5.07
564 565 4.408993 TGATTTTCATGTGACAAGAGCG 57.591 40.909 0.00 0.00 0.00 5.03
565 566 5.125097 AGGATGATTTTCATGTGACAAGAGC 59.875 40.000 0.00 0.00 37.20 4.09
566 567 6.183360 GGAGGATGATTTTCATGTGACAAGAG 60.183 42.308 0.00 0.00 37.20 2.85
567 568 5.649395 GGAGGATGATTTTCATGTGACAAGA 59.351 40.000 0.00 0.00 37.20 3.02
568 569 5.163581 GGGAGGATGATTTTCATGTGACAAG 60.164 44.000 0.00 0.00 37.20 3.16
569 570 4.706476 GGGAGGATGATTTTCATGTGACAA 59.294 41.667 0.00 0.00 37.20 3.18
570 571 4.018141 AGGGAGGATGATTTTCATGTGACA 60.018 41.667 0.00 0.00 37.20 3.58
571 572 4.337555 CAGGGAGGATGATTTTCATGTGAC 59.662 45.833 0.00 0.00 37.20 3.67
572 573 4.529897 CAGGGAGGATGATTTTCATGTGA 58.470 43.478 0.00 0.00 37.20 3.58
573 574 3.067742 GCAGGGAGGATGATTTTCATGTG 59.932 47.826 0.00 0.00 37.20 3.21
574 575 3.053095 AGCAGGGAGGATGATTTTCATGT 60.053 43.478 0.00 0.00 37.20 3.21
575 576 3.563223 AGCAGGGAGGATGATTTTCATG 58.437 45.455 0.00 0.00 37.20 3.07
576 577 3.967467 AGCAGGGAGGATGATTTTCAT 57.033 42.857 0.00 0.00 40.34 2.57
577 578 4.526970 GTTAGCAGGGAGGATGATTTTCA 58.473 43.478 0.00 0.00 0.00 2.69
578 579 3.885901 GGTTAGCAGGGAGGATGATTTTC 59.114 47.826 0.00 0.00 0.00 2.29
579 580 3.269381 TGGTTAGCAGGGAGGATGATTTT 59.731 43.478 0.00 0.00 0.00 1.82
580 581 2.852449 TGGTTAGCAGGGAGGATGATTT 59.148 45.455 0.00 0.00 0.00 2.17
581 582 2.173569 GTGGTTAGCAGGGAGGATGATT 59.826 50.000 0.00 0.00 0.00 2.57
582 583 1.771255 GTGGTTAGCAGGGAGGATGAT 59.229 52.381 0.00 0.00 0.00 2.45
583 584 1.204146 GTGGTTAGCAGGGAGGATGA 58.796 55.000 0.00 0.00 0.00 2.92
584 585 0.911769 TGTGGTTAGCAGGGAGGATG 59.088 55.000 0.00 0.00 0.00 3.51
585 586 1.898863 ATGTGGTTAGCAGGGAGGAT 58.101 50.000 0.00 0.00 0.00 3.24
586 587 1.559682 GAATGTGGTTAGCAGGGAGGA 59.440 52.381 0.00 0.00 0.00 3.71
587 588 1.561542 AGAATGTGGTTAGCAGGGAGG 59.438 52.381 0.00 0.00 0.00 4.30
588 589 3.054802 AGAAGAATGTGGTTAGCAGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
589 590 2.912956 AGAAGAATGTGGTTAGCAGGGA 59.087 45.455 0.00 0.00 0.00 4.20
590 591 3.356529 AGAAGAATGTGGTTAGCAGGG 57.643 47.619 0.00 0.00 0.00 4.45
591 592 3.119708 GCAAGAAGAATGTGGTTAGCAGG 60.120 47.826 0.00 0.00 0.00 4.85
592 593 3.425359 CGCAAGAAGAATGTGGTTAGCAG 60.425 47.826 0.00 0.00 43.02 4.24
593 594 2.483877 CGCAAGAAGAATGTGGTTAGCA 59.516 45.455 0.00 0.00 43.02 3.49
594 595 2.159517 CCGCAAGAAGAATGTGGTTAGC 60.160 50.000 0.00 0.00 42.27 3.09
595 596 3.334691 TCCGCAAGAAGAATGTGGTTAG 58.665 45.455 6.06 0.00 46.28 2.34
596 597 3.410631 TCCGCAAGAAGAATGTGGTTA 57.589 42.857 6.06 0.00 46.28 2.85
597 598 2.270352 TCCGCAAGAAGAATGTGGTT 57.730 45.000 6.06 0.00 46.28 3.67
598 599 2.496899 ATCCGCAAGAAGAATGTGGT 57.503 45.000 6.06 0.00 46.28 4.16
600 601 3.599046 GCTATCCGCAAGAAGAATGTG 57.401 47.619 0.00 0.00 43.02 3.21
612 613 2.202566 GAAGTTGGTACTGCTATCCGC 58.797 52.381 0.00 0.00 34.01 5.54
613 614 3.520290 TGAAGTTGGTACTGCTATCCG 57.480 47.619 0.00 0.00 34.01 4.18
614 615 6.759497 ATTTTGAAGTTGGTACTGCTATCC 57.241 37.500 0.00 0.00 34.01 2.59
618 619 9.830975 AAATTTTATTTTGAAGTTGGTACTGCT 57.169 25.926 0.00 0.00 34.01 4.24
624 625 8.567104 GGCATGAAATTTTATTTTGAAGTTGGT 58.433 29.630 0.00 0.00 0.00 3.67
625 626 7.745594 CGGCATGAAATTTTATTTTGAAGTTGG 59.254 33.333 0.00 0.00 0.00 3.77
626 627 8.494347 TCGGCATGAAATTTTATTTTGAAGTTG 58.506 29.630 0.00 0.00 0.00 3.16
627 628 8.600449 TCGGCATGAAATTTTATTTTGAAGTT 57.400 26.923 0.00 0.00 0.00 2.66
628 629 8.600449 TTCGGCATGAAATTTTATTTTGAAGT 57.400 26.923 0.00 0.00 32.37 3.01
631 632 9.868277 ACTATTCGGCATGAAATTTTATTTTGA 57.132 25.926 0.00 0.00 40.71 2.69
637 638 9.263538 ACGTATACTATTCGGCATGAAATTTTA 57.736 29.630 0.00 0.00 40.71 1.52
638 639 8.067784 CACGTATACTATTCGGCATGAAATTTT 58.932 33.333 0.00 0.00 40.71 1.82
639 640 7.439955 TCACGTATACTATTCGGCATGAAATTT 59.560 33.333 0.00 0.00 40.71 1.82
640 641 6.926826 TCACGTATACTATTCGGCATGAAATT 59.073 34.615 0.00 0.00 40.71 1.82
641 642 6.452242 TCACGTATACTATTCGGCATGAAAT 58.548 36.000 0.00 0.00 40.71 2.17
642 643 5.834169 TCACGTATACTATTCGGCATGAAA 58.166 37.500 0.00 0.00 40.71 2.69
643 644 5.441709 TCACGTATACTATTCGGCATGAA 57.558 39.130 0.00 0.00 41.81 2.57
644 645 4.615223 GCTCACGTATACTATTCGGCATGA 60.615 45.833 0.00 0.00 0.00 3.07
645 646 3.608506 GCTCACGTATACTATTCGGCATG 59.391 47.826 0.56 0.00 0.00 4.06
646 647 3.254903 TGCTCACGTATACTATTCGGCAT 59.745 43.478 0.56 0.00 0.00 4.40
647 648 2.619646 TGCTCACGTATACTATTCGGCA 59.380 45.455 0.56 1.83 0.00 5.69
648 649 3.278367 TGCTCACGTATACTATTCGGC 57.722 47.619 0.56 0.00 0.00 5.54
649 650 7.862741 TTTTATGCTCACGTATACTATTCGG 57.137 36.000 0.56 0.00 0.00 4.30
650 651 8.584600 GGATTTTATGCTCACGTATACTATTCG 58.415 37.037 0.56 0.00 0.00 3.34
651 652 9.419297 TGGATTTTATGCTCACGTATACTATTC 57.581 33.333 0.56 0.00 0.00 1.75
652 653 9.772973 TTGGATTTTATGCTCACGTATACTATT 57.227 29.630 0.56 0.00 0.00 1.73
653 654 9.424319 CTTGGATTTTATGCTCACGTATACTAT 57.576 33.333 0.56 0.00 0.00 2.12
654 655 7.384115 GCTTGGATTTTATGCTCACGTATACTA 59.616 37.037 0.56 0.00 0.00 1.82
655 656 6.202954 GCTTGGATTTTATGCTCACGTATACT 59.797 38.462 0.56 0.00 0.00 2.12
656 657 6.363473 GCTTGGATTTTATGCTCACGTATAC 58.637 40.000 0.00 0.00 0.00 1.47
657 658 5.468746 GGCTTGGATTTTATGCTCACGTATA 59.531 40.000 0.00 0.00 0.00 1.47
658 659 4.275936 GGCTTGGATTTTATGCTCACGTAT 59.724 41.667 0.00 0.00 0.00 3.06
659 660 3.625764 GGCTTGGATTTTATGCTCACGTA 59.374 43.478 0.00 0.00 0.00 3.57
660 661 2.423538 GGCTTGGATTTTATGCTCACGT 59.576 45.455 0.00 0.00 0.00 4.49
661 662 2.539547 CGGCTTGGATTTTATGCTCACG 60.540 50.000 0.00 0.00 0.00 4.35
662 663 2.423538 ACGGCTTGGATTTTATGCTCAC 59.576 45.455 0.00 0.00 0.00 3.51
663 664 2.722094 ACGGCTTGGATTTTATGCTCA 58.278 42.857 0.00 0.00 0.00 4.26
664 665 3.782889 AACGGCTTGGATTTTATGCTC 57.217 42.857 0.00 0.00 0.00 4.26
665 666 4.535526 AAAACGGCTTGGATTTTATGCT 57.464 36.364 0.00 0.00 0.00 3.79
666 667 5.288472 CACTAAAACGGCTTGGATTTTATGC 59.712 40.000 0.00 0.00 29.82 3.14
667 668 6.386654 ACACTAAAACGGCTTGGATTTTATG 58.613 36.000 0.00 0.00 29.82 1.90
668 669 6.584185 ACACTAAAACGGCTTGGATTTTAT 57.416 33.333 0.00 0.00 29.82 1.40
669 670 6.394025 AACACTAAAACGGCTTGGATTTTA 57.606 33.333 0.00 0.00 0.00 1.52
765 771 5.104900 TGCCACTCCTAAAATTCTCCTAGTC 60.105 44.000 0.00 0.00 0.00 2.59
781 787 1.003839 TCCACGAATGTGCCACTCC 60.004 57.895 0.00 0.00 45.04 3.85
783 789 0.108585 AACTCCACGAATGTGCCACT 59.891 50.000 0.00 0.00 45.04 4.00
785 791 0.179032 ACAACTCCACGAATGTGCCA 60.179 50.000 0.00 0.00 45.04 4.92
828 2046 1.102978 AATGGGCCAGCAATACGTTC 58.897 50.000 13.78 0.00 0.00 3.95
839 2057 2.361104 GCGACTGGAAATGGGCCA 60.361 61.111 9.61 9.61 0.00 5.36
873 2091 2.115952 AACCTACGGGGAGGGGAAGT 62.116 60.000 1.26 0.00 41.36 3.01
876 2094 0.643822 ATAAACCTACGGGGAGGGGA 59.356 55.000 1.26 0.00 41.36 4.81
878 2096 1.415289 GTGATAAACCTACGGGGAGGG 59.585 57.143 1.26 0.00 41.36 4.30
880 2098 2.364647 GGAGTGATAAACCTACGGGGAG 59.635 54.545 3.71 0.00 38.76 4.30
881 2099 2.391678 GGAGTGATAAACCTACGGGGA 58.608 52.381 3.71 0.00 38.76 4.81
1322 2550 2.874701 CCTGAATCTAGCAATTGACCCG 59.125 50.000 10.34 0.00 0.00 5.28
1349 2589 4.466015 GGCTTCCCAAGATATTGGTGAAAA 59.534 41.667 17.60 5.97 40.46 2.29
1364 2604 3.008517 TGAGATGGCGGCTTCCCA 61.009 61.111 19.44 12.62 36.66 4.37
1407 2647 0.321671 CCAAGAGAAAGACCAGCCGA 59.678 55.000 0.00 0.00 0.00 5.54
1412 2652 2.634940 CAGGAGTCCAAGAGAAAGACCA 59.365 50.000 12.86 0.00 0.00 4.02
1430 2670 4.785453 GAAGGAGGCCGTGGCAGG 62.785 72.222 13.76 0.00 44.11 4.85
1435 2675 0.174617 GAGAAGAGAAGGAGGCCGTG 59.825 60.000 0.00 0.00 0.00 4.94
1486 2727 2.151881 TTGCACACAACGTACCGTAT 57.848 45.000 0.00 0.00 39.99 3.06
1616 2866 3.047877 CCTCCACGACCGGCAAAC 61.048 66.667 0.00 0.00 0.00 2.93
1617 2867 3.552384 ACCTCCACGACCGGCAAA 61.552 61.111 0.00 0.00 0.00 3.68
1707 2969 1.299773 GCCGCTCCATCTCTTCTCG 60.300 63.158 0.00 0.00 0.00 4.04
1812 3074 0.322975 CCTTGTCCACTGCAGCTAGT 59.677 55.000 15.27 0.00 0.00 2.57
1838 3103 1.871080 ACGAAAGTCAGTCCTTGCTG 58.129 50.000 0.00 0.00 44.19 4.41
1964 3238 9.890629 TGCTGTCATAGTCTTTAAGAACATAAT 57.109 29.630 0.00 0.00 0.00 1.28
2193 3471 2.760092 TGGAAAATATGGTGGCTTGCTC 59.240 45.455 0.00 0.00 0.00 4.26
2347 3771 2.874014 TCAGAATGAACCACCATTGCA 58.126 42.857 0.00 0.00 45.97 4.08
2428 3857 6.764877 ATACAGAGACAAAACAAGTACACG 57.235 37.500 0.00 0.00 0.00 4.49
2470 3899 3.843619 TCAAAGTGTATCACCATCTCCCA 59.156 43.478 0.00 0.00 34.49 4.37
2603 4045 7.791029 TGTCTAACAGCAGGATGAACATTATA 58.209 34.615 0.00 0.00 39.69 0.98
2629 4071 5.291614 TCTGAAGCAATTTTGTGTCAAAAGC 59.708 36.000 12.07 10.72 0.00 3.51
2731 4175 0.323725 AATGGGAAGTGCTCGGCATT 60.324 50.000 1.90 0.00 41.91 3.56
2738 4188 3.507622 GCAAGACTAAAATGGGAAGTGCT 59.492 43.478 0.00 0.00 0.00 4.40
2816 7460 7.101054 ACGCCTCAGTATTAAGTCAAATTACA 58.899 34.615 0.00 0.00 0.00 2.41
2897 7542 9.561270 GACCAGCTAAAGAAATTAGTTTCAATC 57.439 33.333 12.61 0.00 44.92 2.67
2994 7646 9.899226 CTAAATCAAAAGAAGAAAACACCCTAG 57.101 33.333 0.00 0.00 0.00 3.02
3031 7683 1.233019 CTGCCACACTGACTTCTTGG 58.767 55.000 0.00 0.00 0.00 3.61
3095 7748 1.493861 CAGGGGCTGAGAGATCAGAA 58.506 55.000 9.38 0.00 39.99 3.02
3109 7763 1.903404 GTGCAAGGAACACCAGGGG 60.903 63.158 0.00 0.00 31.67 4.79
3110 7764 3.763671 GTGCAAGGAACACCAGGG 58.236 61.111 0.00 0.00 31.67 4.45
3150 7804 8.823220 AAGTTTATATTGATAGGTTGGCAAGT 57.177 30.769 0.00 0.00 0.00 3.16
3191 7846 7.255139 GCAGTCTCAACAAGTACCAAGTATTTT 60.255 37.037 0.00 0.00 0.00 1.82
3200 7855 1.792949 CGTGCAGTCTCAACAAGTACC 59.207 52.381 0.00 0.00 0.00 3.34
3207 7862 0.247736 AGATCCCGTGCAGTCTCAAC 59.752 55.000 0.00 0.00 0.00 3.18
3219 7874 6.049149 TGTCTGAAATTAGCTTTAGATCCCG 58.951 40.000 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.