Multiple sequence alignment - TraesCS7A01G481000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G481000 chr7A 100.000 3245 0 0 1 3245 673018905 673022149 0.000000e+00 5993.0
1 TraesCS7A01G481000 chr5B 95.231 1426 31 15 1837 3245 523136830 523138235 0.000000e+00 2222.0
2 TraesCS7A01G481000 chr5B 79.284 391 37 16 1105 1475 55766557 55766923 1.950000e-57 233.0
3 TraesCS7A01G481000 chr7B 88.607 1220 80 29 553 1751 64484461 64483280 0.000000e+00 1428.0
4 TraesCS7A01G481000 chr7B 91.272 676 32 11 1749 2403 64482660 64481991 0.000000e+00 896.0
5 TraesCS7A01G481000 chr7B 89.873 632 58 3 1959 2587 620571839 620572467 0.000000e+00 808.0
6 TraesCS7A01G481000 chr7B 87.940 597 38 14 2586 3167 620572576 620573153 0.000000e+00 673.0
7 TraesCS7A01G481000 chr7B 83.462 520 47 22 981 1478 416431865 416432367 6.390000e-122 448.0
8 TraesCS7A01G481000 chr7B 85.211 284 22 8 1476 1751 416432424 416432695 1.150000e-69 274.0
9 TraesCS7A01G481000 chr7B 84.024 169 11 6 1749 1901 620571657 620571825 7.250000e-32 148.0
10 TraesCS7A01G481000 chr7B 94.565 92 4 1 454 544 400422369 400422278 1.210000e-29 141.0
11 TraesCS7A01G481000 chr7B 93.478 92 5 1 454 544 400463488 400463397 5.650000e-28 135.0
12 TraesCS7A01G481000 chr7B 82.677 127 15 6 604 727 642533418 642533296 4.430000e-19 106.0
13 TraesCS7A01G481000 chr7B 100.000 29 0 0 3215 3243 474468632 474468660 2.000000e-03 54.7
14 TraesCS7A01G481000 chr7D 88.720 789 69 9 1811 2587 559672575 559671795 0.000000e+00 946.0
15 TraesCS7A01G481000 chr7D 93.091 275 18 1 181 455 581130245 581130518 5.040000e-108 401.0
16 TraesCS7A01G481000 chr7D 79.241 395 38 16 1105 1479 328322510 328322140 5.410000e-58 235.0
17 TraesCS7A01G481000 chr7D 86.806 144 10 4 2602 2743 559671724 559671588 5.610000e-33 152.0
18 TraesCS7A01G481000 chr7D 88.679 106 9 3 440 543 35630171 35630275 3.400000e-25 126.0
19 TraesCS7A01G481000 chr7D 92.188 64 5 0 1 64 581128181 581128244 1.240000e-14 91.6
20 TraesCS7A01G481000 chr2B 88.402 776 77 8 1811 2582 406246169 406245403 0.000000e+00 922.0
21 TraesCS7A01G481000 chr2B 89.610 539 45 6 1811 2346 10667243 10667773 0.000000e+00 675.0
22 TraesCS7A01G481000 chr2B 88.559 236 19 6 2581 2815 599845284 599845056 2.470000e-71 279.0
23 TraesCS7A01G481000 chr2B 88.362 232 17 7 2585 2815 104797232 104797010 1.480000e-68 270.0
24 TraesCS7A01G481000 chr2B 87.805 205 19 4 2611 2815 406244826 406244628 5.410000e-58 235.0
25 TraesCS7A01G481000 chr2B 87.248 149 17 2 2412 2559 599845723 599845576 5.570000e-38 169.0
26 TraesCS7A01G481000 chr2B 100.000 29 0 0 3215 3243 729521246 729521218 2.000000e-03 54.7
27 TraesCS7A01G481000 chr4D 87.564 780 76 11 1811 2587 191268305 191269066 0.000000e+00 883.0
28 TraesCS7A01G481000 chr4D 84.483 232 16 14 453 679 210806469 210806685 9.120000e-51 211.0
29 TraesCS7A01G481000 chr3D 86.067 811 60 27 965 1751 253560966 253560185 0.000000e+00 822.0
30 TraesCS7A01G481000 chr3D 85.185 810 68 28 965 1751 12624881 12625661 0.000000e+00 784.0
31 TraesCS7A01G481000 chr3D 83.206 524 52 24 981 1479 593112096 593112608 6.390000e-122 448.0
32 TraesCS7A01G481000 chr3D 79.241 395 38 16 1105 1479 290720365 290719995 5.410000e-58 235.0
33 TraesCS7A01G481000 chr3D 93.836 146 9 0 1477 1622 609891095 609890950 1.520000e-53 220.0
34 TraesCS7A01G481000 chr3D 81.229 293 33 17 455 727 144280893 144281183 1.960000e-52 217.0
35 TraesCS7A01G481000 chr3D 89.286 84 1 2 1366 1447 609891177 609891100 7.410000e-17 99.0
36 TraesCS7A01G481000 chr5D 85.432 810 62 28 965 1751 482211714 482212490 0.000000e+00 791.0
37 TraesCS7A01G481000 chr4A 85.130 807 66 27 965 1747 520183084 520183860 0.000000e+00 776.0
38 TraesCS7A01G481000 chr4A 94.444 90 4 1 456 544 473521363 473521274 1.570000e-28 137.0
39 TraesCS7A01G481000 chr4A 88.571 105 9 3 455 558 156782228 156782330 1.220000e-24 124.0
40 TraesCS7A01G481000 chr4A 84.483 116 15 1 1626 1741 277990312 277990424 9.520000e-21 111.0
41 TraesCS7A01G481000 chr4A 100.000 29 0 0 3215 3243 107888585 107888557 2.000000e-03 54.7
42 TraesCS7A01G481000 chr5A 89.446 578 52 5 1811 2385 109299718 109300289 0.000000e+00 721.0
43 TraesCS7A01G481000 chr5A 93.836 146 9 0 1477 1622 109298819 109298964 1.520000e-53 220.0
44 TraesCS7A01G481000 chr2A 89.119 579 54 5 1811 2386 130180007 130179435 0.000000e+00 712.0
45 TraesCS7A01G481000 chr2A 75.238 420 54 21 1082 1475 314683319 314682924 1.560000e-33 154.0
46 TraesCS7A01G481000 chr1B 89.513 534 44 7 1811 2340 198559896 198560421 0.000000e+00 665.0
47 TraesCS7A01G481000 chr1B 87.446 231 17 6 2585 2815 198560903 198561121 4.150000e-64 255.0
48 TraesCS7A01G481000 chr1B 79.494 395 37 16 1105 1479 416586029 416585659 1.160000e-59 241.0
49 TraesCS7A01G481000 chr1B 84.831 178 26 1 2401 2578 198560422 198560598 9.250000e-41 178.0
50 TraesCS7A01G481000 chr1B 94.505 91 4 1 455 544 631125199 631125289 4.370000e-29 139.0
51 TraesCS7A01G481000 chr6A 86.557 424 49 6 2170 2587 139900122 139900543 8.200000e-126 460.0
52 TraesCS7A01G481000 chr3B 83.109 521 57 17 981 1479 795377917 795378428 2.300000e-121 446.0
53 TraesCS7A01G481000 chr3B 87.143 280 23 7 1476 1751 295019094 295019364 4.070000e-79 305.0
54 TraesCS7A01G481000 chr3A 82.430 535 52 22 975 1479 724376000 724376522 2.310000e-116 429.0
55 TraesCS7A01G481000 chr3A 81.340 209 23 13 532 727 572463793 572463588 4.330000e-34 156.0
56 TraesCS7A01G481000 chr3A 100.000 29 0 0 3215 3243 329532975 329533003 2.000000e-03 54.7
57 TraesCS7A01G481000 chr3A 100.000 29 0 0 3215 3243 329626525 329626553 2.000000e-03 54.7
58 TraesCS7A01G481000 chr2D 87.814 279 32 2 2309 2587 628840856 628841132 3.120000e-85 326.0
59 TraesCS7A01G481000 chr2D 77.064 436 38 30 1069 1479 350637665 350638063 9.190000e-46 195.0
60 TraesCS7A01G481000 chr2D 89.524 105 8 3 455 558 6461199 6461301 2.630000e-26 130.0
61 TraesCS7A01G481000 chr2D 94.444 72 4 0 1476 1547 350638118 350638189 9.520000e-21 111.0
62 TraesCS7A01G481000 chr2D 100.000 29 0 0 3215 3243 286022913 286022941 2.000000e-03 54.7
63 TraesCS7A01G481000 chr6B 87.591 274 24 4 1481 1751 647455713 647455979 3.140000e-80 309.0
64 TraesCS7A01G481000 chr1D 78.571 392 40 16 1105 1476 358852060 358852427 5.450000e-53 219.0
65 TraesCS7A01G481000 chr1D 90.816 98 8 1 448 544 355674963 355675060 2.630000e-26 130.0
66 TraesCS7A01G481000 chr6D 78.819 288 31 19 455 727 19890778 19891050 2.000000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G481000 chr7A 673018905 673022149 3244 False 5993.0 5993 100.000000 1 3245 1 chr7A.!!$F1 3244
1 TraesCS7A01G481000 chr5B 523136830 523138235 1405 False 2222.0 2222 95.231000 1837 3245 1 chr5B.!!$F2 1408
2 TraesCS7A01G481000 chr7B 64481991 64484461 2470 True 1162.0 1428 89.939500 553 2403 2 chr7B.!!$R4 1850
3 TraesCS7A01G481000 chr7B 620571657 620573153 1496 False 543.0 808 87.279000 1749 3167 3 chr7B.!!$F3 1418
4 TraesCS7A01G481000 chr7B 416431865 416432695 830 False 361.0 448 84.336500 981 1751 2 chr7B.!!$F2 770
5 TraesCS7A01G481000 chr7D 559671588 559672575 987 True 549.0 946 87.763000 1811 2743 2 chr7D.!!$R2 932
6 TraesCS7A01G481000 chr7D 581128181 581130518 2337 False 246.3 401 92.639500 1 455 2 chr7D.!!$F2 454
7 TraesCS7A01G481000 chr2B 10667243 10667773 530 False 675.0 675 89.610000 1811 2346 1 chr2B.!!$F1 535
8 TraesCS7A01G481000 chr2B 406244628 406246169 1541 True 578.5 922 88.103500 1811 2815 2 chr2B.!!$R3 1004
9 TraesCS7A01G481000 chr2B 599845056 599845723 667 True 224.0 279 87.903500 2412 2815 2 chr2B.!!$R4 403
10 TraesCS7A01G481000 chr4D 191268305 191269066 761 False 883.0 883 87.564000 1811 2587 1 chr4D.!!$F1 776
11 TraesCS7A01G481000 chr3D 253560185 253560966 781 True 822.0 822 86.067000 965 1751 1 chr3D.!!$R1 786
12 TraesCS7A01G481000 chr3D 12624881 12625661 780 False 784.0 784 85.185000 965 1751 1 chr3D.!!$F1 786
13 TraesCS7A01G481000 chr3D 593112096 593112608 512 False 448.0 448 83.206000 981 1479 1 chr3D.!!$F3 498
14 TraesCS7A01G481000 chr5D 482211714 482212490 776 False 791.0 791 85.432000 965 1751 1 chr5D.!!$F1 786
15 TraesCS7A01G481000 chr4A 520183084 520183860 776 False 776.0 776 85.130000 965 1747 1 chr4A.!!$F3 782
16 TraesCS7A01G481000 chr5A 109298819 109300289 1470 False 470.5 721 91.641000 1477 2385 2 chr5A.!!$F1 908
17 TraesCS7A01G481000 chr2A 130179435 130180007 572 True 712.0 712 89.119000 1811 2386 1 chr2A.!!$R1 575
18 TraesCS7A01G481000 chr1B 198559896 198561121 1225 False 366.0 665 87.263333 1811 2815 3 chr1B.!!$F2 1004
19 TraesCS7A01G481000 chr3B 795377917 795378428 511 False 446.0 446 83.109000 981 1479 1 chr3B.!!$F2 498
20 TraesCS7A01G481000 chr3A 724376000 724376522 522 False 429.0 429 82.430000 975 1479 1 chr3A.!!$F3 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
154 155 0.032615 AGGGTTTGGGCACTTGTTGA 60.033 50.0 0.00 0.0 0.00 3.18 F
299 323 0.103937 GAATCTCTGGCGGAGGAGTG 59.896 60.0 22.67 0.0 42.10 3.51 F
848 1236 0.104855 TCTTTATCAGCCGCTCGCAT 59.895 50.0 0.00 0.0 41.38 4.73 F
896 1284 0.178992 CCTGACCAAAGGAAGGCACA 60.179 55.0 0.00 0.0 40.02 4.57 F
1196 2166 0.527817 GCGGATTCGTGAGTACCCAG 60.528 60.0 0.00 0.0 38.89 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1411 2473 0.031178 GAGGCAGTTGGTTGTGCTTG 59.969 55.000 0.00 0.0 39.76 4.01 R
1412 2474 0.106519 AGAGGCAGTTGGTTGTGCTT 60.107 50.000 0.00 0.0 39.76 3.91 R
1953 3776 1.405526 GCCAAGCTCGTCCATCTTGTA 60.406 52.381 0.00 0.0 36.41 2.41 R
2103 3926 2.141517 CGGCTGATCATTAGAAGGCAG 58.858 52.381 0.00 0.0 35.07 4.85 R
3138 6169 1.420430 AAGAAGGACGTCAGGTGGAA 58.580 50.000 18.91 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.370633 GGTAGAAAGAAAGAAGCGGGGAT 60.371 47.826 0.00 0.00 0.00 3.85
43 44 0.681243 AAGAAAGAAGCGGGGATGGC 60.681 55.000 0.00 0.00 0.00 4.40
47 48 3.202706 GAAGCGGGGATGGCGTTC 61.203 66.667 0.00 0.00 35.00 3.95
48 49 3.969250 GAAGCGGGGATGGCGTTCA 62.969 63.158 0.00 0.00 35.00 3.18
53 54 0.819259 CGGGGATGGCGTTCATGATT 60.819 55.000 0.00 0.00 35.97 2.57
64 65 9.317936 GATGGCGTTCATGATTATGATTCTATA 57.682 33.333 0.37 0.00 42.60 1.31
65 66 9.842775 ATGGCGTTCATGATTATGATTCTATAT 57.157 29.630 0.37 0.00 42.60 0.86
66 67 9.317936 TGGCGTTCATGATTATGATTCTATATC 57.682 33.333 0.37 0.00 42.60 1.63
67 68 9.317936 GGCGTTCATGATTATGATTCTATATCA 57.682 33.333 0.37 0.00 42.60 2.15
75 76 9.428097 TGATTATGATTCTATATCATATGCGGC 57.572 33.333 7.96 0.00 39.77 6.53
76 77 9.650539 GATTATGATTCTATATCATATGCGGCT 57.349 33.333 0.00 0.00 39.77 5.52
77 78 8.822652 TTATGATTCTATATCATATGCGGCTG 57.177 34.615 0.00 0.00 39.77 4.85
78 79 5.604565 TGATTCTATATCATATGCGGCTGG 58.395 41.667 0.00 0.00 0.00 4.85
79 80 3.459232 TCTATATCATATGCGGCTGGC 57.541 47.619 0.00 0.00 43.96 4.85
80 81 3.033909 TCTATATCATATGCGGCTGGCT 58.966 45.455 0.00 0.00 44.05 4.75
81 82 2.795231 ATATCATATGCGGCTGGCTT 57.205 45.000 0.00 0.00 44.05 4.35
83 84 0.109153 ATCATATGCGGCTGGCTTGA 59.891 50.000 0.00 0.00 44.05 3.02
84 85 0.107263 TCATATGCGGCTGGCTTGAA 60.107 50.000 0.00 0.00 44.05 2.69
85 86 0.740149 CATATGCGGCTGGCTTGAAA 59.260 50.000 0.00 0.00 44.05 2.69
86 87 0.740737 ATATGCGGCTGGCTTGAAAC 59.259 50.000 0.00 0.00 44.05 2.78
89 90 0.607762 TGCGGCTGGCTTGAAACATA 60.608 50.000 0.00 0.00 44.05 2.29
90 91 0.525761 GCGGCTGGCTTGAAACATAA 59.474 50.000 0.00 0.00 39.11 1.90
91 92 1.134946 GCGGCTGGCTTGAAACATAAT 59.865 47.619 0.00 0.00 39.11 1.28
92 93 2.801063 CGGCTGGCTTGAAACATAATG 58.199 47.619 0.00 0.00 0.00 1.90
93 94 2.423185 CGGCTGGCTTGAAACATAATGA 59.577 45.455 0.00 0.00 0.00 2.57
95 96 3.445096 GGCTGGCTTGAAACATAATGAGT 59.555 43.478 0.00 0.00 0.00 3.41
96 97 4.418392 GCTGGCTTGAAACATAATGAGTG 58.582 43.478 0.00 0.00 0.00 3.51
97 98 4.156556 GCTGGCTTGAAACATAATGAGTGA 59.843 41.667 0.00 0.00 0.00 3.41
98 99 5.163581 GCTGGCTTGAAACATAATGAGTGAT 60.164 40.000 0.00 0.00 0.00 3.06
101 102 6.883756 TGGCTTGAAACATAATGAGTGATGTA 59.116 34.615 0.00 0.00 35.21 2.29
102 103 7.392953 TGGCTTGAAACATAATGAGTGATGTAA 59.607 33.333 0.00 0.00 35.21 2.41
103 104 8.243426 GGCTTGAAACATAATGAGTGATGTAAA 58.757 33.333 0.00 0.00 35.21 2.01
104 105 9.282247 GCTTGAAACATAATGAGTGATGTAAAG 57.718 33.333 0.00 0.00 35.21 1.85
112 113 9.899226 CATAATGAGTGATGTAAAGTAGATCGA 57.101 33.333 0.00 0.00 31.58 3.59
114 115 6.378710 TGAGTGATGTAAAGTAGATCGAGG 57.621 41.667 0.00 0.00 31.58 4.63
115 116 5.299531 TGAGTGATGTAAAGTAGATCGAGGG 59.700 44.000 0.00 0.00 31.58 4.30
116 117 5.446860 AGTGATGTAAAGTAGATCGAGGGA 58.553 41.667 0.00 0.00 31.58 4.20
117 118 6.071984 AGTGATGTAAAGTAGATCGAGGGAT 58.928 40.000 0.00 0.00 31.58 3.85
129 130 2.128729 GAGGGATCTCGAAGGGTGG 58.871 63.158 0.00 0.00 0.00 4.61
130 131 0.688087 GAGGGATCTCGAAGGGTGGT 60.688 60.000 0.00 0.00 0.00 4.16
132 133 1.437986 GGATCTCGAAGGGTGGTCG 59.562 63.158 0.00 0.00 39.88 4.79
133 134 1.035932 GGATCTCGAAGGGTGGTCGA 61.036 60.000 0.00 0.00 44.82 4.20
134 135 1.033574 GATCTCGAAGGGTGGTCGAT 58.966 55.000 0.00 0.00 45.75 3.59
135 136 2.228059 GATCTCGAAGGGTGGTCGATA 58.772 52.381 0.00 0.00 45.75 2.92
136 137 1.676746 TCTCGAAGGGTGGTCGATAG 58.323 55.000 0.00 0.00 45.75 2.08
137 138 0.669077 CTCGAAGGGTGGTCGATAGG 59.331 60.000 0.00 0.00 45.75 2.57
138 139 0.754217 TCGAAGGGTGGTCGATAGGG 60.754 60.000 0.00 0.00 42.31 3.53
139 140 1.041447 CGAAGGGTGGTCGATAGGGT 61.041 60.000 0.00 0.00 41.02 4.34
140 141 1.201424 GAAGGGTGGTCGATAGGGTT 58.799 55.000 0.00 0.00 0.00 4.11
141 142 1.558294 GAAGGGTGGTCGATAGGGTTT 59.442 52.381 0.00 0.00 0.00 3.27
142 143 0.909623 AGGGTGGTCGATAGGGTTTG 59.090 55.000 0.00 0.00 0.00 2.93
144 145 0.107361 GGTGGTCGATAGGGTTTGGG 60.107 60.000 0.00 0.00 0.00 4.12
145 146 0.746923 GTGGTCGATAGGGTTTGGGC 60.747 60.000 0.00 0.00 0.00 5.36
146 147 1.202099 TGGTCGATAGGGTTTGGGCA 61.202 55.000 0.00 0.00 0.00 5.36
147 148 0.746923 GGTCGATAGGGTTTGGGCAC 60.747 60.000 0.00 0.00 0.00 5.01
149 150 0.988832 TCGATAGGGTTTGGGCACTT 59.011 50.000 0.00 0.00 0.00 3.16
154 155 0.032615 AGGGTTTGGGCACTTGTTGA 60.033 50.000 0.00 0.00 0.00 3.18
155 156 0.827368 GGGTTTGGGCACTTGTTGAA 59.173 50.000 0.00 0.00 0.00 2.69
156 157 1.416030 GGGTTTGGGCACTTGTTGAAT 59.584 47.619 0.00 0.00 0.00 2.57
159 160 3.320826 GGTTTGGGCACTTGTTGAATAGT 59.679 43.478 0.00 0.00 0.00 2.12
160 161 4.521256 GGTTTGGGCACTTGTTGAATAGTA 59.479 41.667 0.00 0.00 0.00 1.82
163 164 2.683362 GGGCACTTGTTGAATAGTAGGC 59.317 50.000 0.00 0.00 0.00 3.93
164 165 3.610911 GGCACTTGTTGAATAGTAGGCT 58.389 45.455 0.00 0.00 0.00 4.58
165 166 4.383770 GGGCACTTGTTGAATAGTAGGCTA 60.384 45.833 0.00 0.00 0.00 3.93
166 167 4.811557 GGCACTTGTTGAATAGTAGGCTAG 59.188 45.833 0.00 0.00 0.00 3.42
167 168 5.420409 GCACTTGTTGAATAGTAGGCTAGT 58.580 41.667 7.12 7.12 0.00 2.57
168 169 5.292101 GCACTTGTTGAATAGTAGGCTAGTG 59.708 44.000 12.17 6.69 34.56 2.74
169 170 6.398918 CACTTGTTGAATAGTAGGCTAGTGT 58.601 40.000 12.17 2.18 0.00 3.55
170 171 6.874134 CACTTGTTGAATAGTAGGCTAGTGTT 59.126 38.462 12.17 11.40 0.00 3.32
173 174 7.182817 TGTTGAATAGTAGGCTAGTGTTCAT 57.817 36.000 30.09 8.91 38.47 2.57
174 175 7.041721 TGTTGAATAGTAGGCTAGTGTTCATG 58.958 38.462 30.09 0.00 38.47 3.07
175 176 6.161855 TGAATAGTAGGCTAGTGTTCATGG 57.838 41.667 27.62 0.00 35.28 3.66
177 178 3.895232 AGTAGGCTAGTGTTCATGGTG 57.105 47.619 0.00 0.00 0.00 4.17
180 181 1.977854 AGGCTAGTGTTCATGGTGTGA 59.022 47.619 0.00 0.00 34.25 3.58
181 182 2.371841 AGGCTAGTGTTCATGGTGTGAA 59.628 45.455 0.00 0.00 44.36 3.18
183 184 3.557054 GGCTAGTGTTCATGGTGTGAAGA 60.557 47.826 0.00 0.00 46.99 2.87
187 188 3.836365 TGTTCATGGTGTGAAGACTCA 57.164 42.857 0.00 0.00 46.99 3.41
188 189 4.356405 TGTTCATGGTGTGAAGACTCAT 57.644 40.909 0.00 0.00 46.99 2.90
189 190 5.482163 TGTTCATGGTGTGAAGACTCATA 57.518 39.130 0.00 0.00 46.99 2.15
190 191 6.053632 TGTTCATGGTGTGAAGACTCATAT 57.946 37.500 0.00 0.00 46.99 1.78
191 192 7.181569 TGTTCATGGTGTGAAGACTCATATA 57.818 36.000 0.00 0.00 46.99 0.86
194 195 5.363580 TCATGGTGTGAAGACTCATATAGCA 59.636 40.000 0.00 0.00 32.78 3.49
195 196 5.675684 TGGTGTGAAGACTCATATAGCAA 57.324 39.130 0.00 0.00 33.05 3.91
196 197 6.048732 TGGTGTGAAGACTCATATAGCAAA 57.951 37.500 0.00 0.00 33.05 3.68
197 198 6.472016 TGGTGTGAAGACTCATATAGCAAAA 58.528 36.000 0.00 0.00 33.05 2.44
200 224 7.497249 GGTGTGAAGACTCATATAGCAAAATCT 59.503 37.037 0.00 0.00 33.05 2.40
202 226 8.043113 TGTGAAGACTCATATAGCAAAATCTGT 58.957 33.333 0.00 0.00 33.05 3.41
204 228 8.886719 TGAAGACTCATATAGCAAAATCTGTTG 58.113 33.333 0.00 0.00 0.00 3.33
208 232 7.253422 ACTCATATAGCAAAATCTGTTGTTGC 58.747 34.615 5.64 5.64 46.35 4.17
211 235 1.851658 GCAAAATCTGTTGTTGCGGT 58.148 45.000 0.00 0.00 38.39 5.68
215 239 0.823356 AATCTGTTGTTGCGGTGCCT 60.823 50.000 0.00 0.00 0.00 4.75
219 243 4.263209 TTGTTGCGGTGCCTTGCG 62.263 61.111 0.00 0.00 0.00 4.85
221 245 4.264638 GTTGCGGTGCCTTGCGTT 62.265 61.111 0.00 0.00 0.00 4.84
222 246 3.959975 TTGCGGTGCCTTGCGTTC 61.960 61.111 0.00 0.00 0.00 3.95
227 251 3.670377 GTGCCTTGCGTTCCACCC 61.670 66.667 0.00 0.00 0.00 4.61
228 252 4.196778 TGCCTTGCGTTCCACCCA 62.197 61.111 0.00 0.00 0.00 4.51
229 253 2.909965 GCCTTGCGTTCCACCCAA 60.910 61.111 0.00 0.00 0.00 4.12
231 255 1.228124 CCTTGCGTTCCACCCAAGA 60.228 57.895 3.36 0.00 38.52 3.02
233 257 0.523072 CTTGCGTTCCACCCAAGATG 59.477 55.000 0.00 0.00 38.52 2.90
235 259 1.002624 GCGTTCCACCCAAGATGGA 60.003 57.895 0.00 0.00 44.74 3.41
236 260 1.305930 GCGTTCCACCCAAGATGGAC 61.306 60.000 0.00 0.00 46.09 4.02
239 263 0.698238 TTCCACCCAAGATGGACTGG 59.302 55.000 0.00 2.70 46.09 4.00
241 265 0.405585 CCACCCAAGATGGACTGGTT 59.594 55.000 0.00 0.00 40.96 3.67
243 267 1.073763 CACCCAAGATGGACTGGTTGA 59.926 52.381 0.00 0.00 40.96 3.18
244 268 1.780309 ACCCAAGATGGACTGGTTGAA 59.220 47.619 0.00 0.00 40.96 2.69
245 269 2.224867 ACCCAAGATGGACTGGTTGAAG 60.225 50.000 0.00 0.00 40.96 3.02
246 270 2.440409 CCAAGATGGACTGGTTGAAGG 58.560 52.381 0.00 0.00 40.96 3.46
248 272 3.077359 CAAGATGGACTGGTTGAAGGTC 58.923 50.000 0.00 0.00 0.00 3.85
249 273 2.338809 AGATGGACTGGTTGAAGGTCA 58.661 47.619 0.00 0.00 0.00 4.02
250 274 2.711009 AGATGGACTGGTTGAAGGTCAA 59.289 45.455 0.00 0.00 33.32 3.18
251 275 3.331889 AGATGGACTGGTTGAAGGTCAAT 59.668 43.478 0.00 0.00 38.79 2.57
254 278 2.814336 GGACTGGTTGAAGGTCAATGTC 59.186 50.000 10.51 10.51 38.79 3.06
255 279 2.480419 GACTGGTTGAAGGTCAATGTCG 59.520 50.000 0.00 0.00 38.79 4.35
256 280 2.104111 ACTGGTTGAAGGTCAATGTCGA 59.896 45.455 0.00 0.00 38.79 4.20
257 281 3.244561 ACTGGTTGAAGGTCAATGTCGAT 60.245 43.478 0.00 0.00 38.79 3.59
258 282 3.073678 TGGTTGAAGGTCAATGTCGATG 58.926 45.455 0.00 0.00 38.79 3.84
259 283 2.420022 GGTTGAAGGTCAATGTCGATGG 59.580 50.000 0.00 0.00 38.79 3.51
260 284 1.737838 TGAAGGTCAATGTCGATGGC 58.262 50.000 0.00 0.00 0.00 4.40
261 285 0.652592 GAAGGTCAATGTCGATGGCG 59.347 55.000 0.00 0.00 39.35 5.69
262 286 1.369091 AAGGTCAATGTCGATGGCGC 61.369 55.000 0.00 0.00 37.46 6.53
263 287 2.709475 GTCAATGTCGATGGCGCC 59.291 61.111 22.73 22.73 37.46 6.53
264 288 2.106074 GTCAATGTCGATGGCGCCA 61.106 57.895 34.80 34.80 37.46 5.69
265 289 1.153188 TCAATGTCGATGGCGCCAT 60.153 52.632 41.16 41.16 37.77 4.40
266 290 1.009335 CAATGTCGATGGCGCCATG 60.009 57.895 44.96 32.97 36.10 3.66
267 291 1.153188 AATGTCGATGGCGCCATGA 60.153 52.632 44.96 34.47 36.10 3.07
268 292 1.439353 AATGTCGATGGCGCCATGAC 61.439 55.000 44.96 40.39 36.10 3.06
269 293 2.511373 GTCGATGGCGCCATGACA 60.511 61.111 44.96 25.18 42.47 3.58
270 294 2.106074 GTCGATGGCGCCATGACAA 61.106 57.895 44.96 23.79 40.74 3.18
271 295 1.376553 TCGATGGCGCCATGACAAA 60.377 52.632 44.96 22.00 40.74 2.83
272 296 0.957888 TCGATGGCGCCATGACAAAA 60.958 50.000 44.96 20.25 40.74 2.44
273 297 0.523968 CGATGGCGCCATGACAAAAG 60.524 55.000 44.96 21.69 40.74 2.27
274 298 0.179129 GATGGCGCCATGACAAAAGG 60.179 55.000 44.96 0.00 40.74 3.11
275 299 0.611618 ATGGCGCCATGACAAAAGGA 60.612 50.000 40.10 9.44 40.74 3.36
276 300 1.243342 TGGCGCCATGACAAAAGGAG 61.243 55.000 29.03 0.00 26.81 3.69
277 301 1.508088 GCGCCATGACAAAAGGAGG 59.492 57.895 0.00 0.00 0.00 4.30
278 302 0.960364 GCGCCATGACAAAAGGAGGA 60.960 55.000 0.00 0.00 0.00 3.71
279 303 1.533625 CGCCATGACAAAAGGAGGAA 58.466 50.000 0.00 0.00 0.00 3.36
280 304 1.470098 CGCCATGACAAAAGGAGGAAG 59.530 52.381 0.00 0.00 0.00 3.46
281 305 2.795329 GCCATGACAAAAGGAGGAAGA 58.205 47.619 0.00 0.00 0.00 2.87
282 306 3.157087 GCCATGACAAAAGGAGGAAGAA 58.843 45.455 0.00 0.00 0.00 2.52
283 307 3.766051 GCCATGACAAAAGGAGGAAGAAT 59.234 43.478 0.00 0.00 0.00 2.40
284 308 4.142293 GCCATGACAAAAGGAGGAAGAATC 60.142 45.833 0.00 0.00 0.00 2.52
285 309 5.259632 CCATGACAAAAGGAGGAAGAATCT 58.740 41.667 0.00 0.00 0.00 2.40
286 310 5.356470 CCATGACAAAAGGAGGAAGAATCTC 59.644 44.000 0.00 0.00 0.00 2.75
287 311 5.832539 TGACAAAAGGAGGAAGAATCTCT 57.167 39.130 0.00 0.00 0.00 3.10
288 312 5.555017 TGACAAAAGGAGGAAGAATCTCTG 58.445 41.667 0.00 0.00 0.00 3.35
289 313 4.916183 ACAAAAGGAGGAAGAATCTCTGG 58.084 43.478 0.00 0.00 0.00 3.86
290 314 3.643199 AAAGGAGGAAGAATCTCTGGC 57.357 47.619 0.00 0.00 0.00 4.85
291 315 1.118838 AGGAGGAAGAATCTCTGGCG 58.881 55.000 0.00 0.00 0.00 5.69
292 316 0.105778 GGAGGAAGAATCTCTGGCGG 59.894 60.000 0.00 0.00 0.00 6.13
293 317 1.115467 GAGGAAGAATCTCTGGCGGA 58.885 55.000 0.00 0.00 0.00 5.54
294 318 1.068434 GAGGAAGAATCTCTGGCGGAG 59.932 57.143 17.47 17.47 43.12 4.63
295 319 0.105778 GGAAGAATCTCTGGCGGAGG 59.894 60.000 22.67 5.06 42.10 4.30
296 320 1.115467 GAAGAATCTCTGGCGGAGGA 58.885 55.000 22.67 10.30 42.10 3.71
297 321 1.068434 GAAGAATCTCTGGCGGAGGAG 59.932 57.143 22.67 6.85 42.10 3.69
298 322 0.032615 AGAATCTCTGGCGGAGGAGT 60.033 55.000 22.67 9.19 42.10 3.85
299 323 0.103937 GAATCTCTGGCGGAGGAGTG 59.896 60.000 22.67 0.00 42.10 3.51
300 324 0.324738 AATCTCTGGCGGAGGAGTGA 60.325 55.000 22.67 4.05 42.10 3.41
301 325 1.040339 ATCTCTGGCGGAGGAGTGAC 61.040 60.000 22.67 0.00 42.10 3.67
302 326 2.680352 TCTGGCGGAGGAGTGACC 60.680 66.667 0.00 0.00 39.35 4.02
308 332 2.971452 GGAGGAGTGACCGACCAC 59.029 66.667 0.00 0.00 44.74 4.16
309 333 2.647158 GGAGGAGTGACCGACCACC 61.647 68.421 3.98 0.00 44.74 4.61
310 334 1.906824 GAGGAGTGACCGACCACCA 60.907 63.158 3.98 0.00 44.74 4.17
311 335 1.229209 AGGAGTGACCGACCACCAT 60.229 57.895 3.98 0.00 44.74 3.55
312 336 1.079127 GGAGTGACCGACCACCATG 60.079 63.158 3.98 0.00 37.76 3.66
313 337 1.079127 GAGTGACCGACCACCATGG 60.079 63.158 11.19 11.19 45.02 3.66
314 338 2.746277 GTGACCGACCACCATGGC 60.746 66.667 13.04 0.00 42.67 4.40
315 339 3.245346 TGACCGACCACCATGGCA 61.245 61.111 13.04 0.00 42.67 4.92
316 340 2.272146 GACCGACCACCATGGCAT 59.728 61.111 13.04 0.00 42.67 4.40
317 341 2.045045 ACCGACCACCATGGCATG 60.045 61.111 20.56 20.56 42.67 4.06
318 342 2.045045 CCGACCACCATGGCATGT 60.045 61.111 24.80 6.36 42.67 3.21
319 343 1.678635 CCGACCACCATGGCATGTT 60.679 57.895 24.80 9.47 42.67 2.71
320 344 1.250154 CCGACCACCATGGCATGTTT 61.250 55.000 24.80 9.69 42.67 2.83
321 345 0.171007 CGACCACCATGGCATGTTTC 59.829 55.000 24.80 13.90 42.67 2.78
322 346 0.171007 GACCACCATGGCATGTTTCG 59.829 55.000 24.80 12.62 42.67 3.46
323 347 1.250154 ACCACCATGGCATGTTTCGG 61.250 55.000 24.80 19.70 42.67 4.30
324 348 1.512230 CACCATGGCATGTTTCGGG 59.488 57.895 24.80 11.82 0.00 5.14
325 349 1.076549 ACCATGGCATGTTTCGGGT 59.923 52.632 24.80 12.47 0.00 5.28
326 350 0.541764 ACCATGGCATGTTTCGGGTT 60.542 50.000 24.80 0.00 0.00 4.11
327 351 0.108709 CCATGGCATGTTTCGGGTTG 60.109 55.000 24.80 3.63 0.00 3.77
328 352 0.108709 CATGGCATGTTTCGGGTTGG 60.109 55.000 19.32 0.00 0.00 3.77
329 353 1.257055 ATGGCATGTTTCGGGTTGGG 61.257 55.000 0.00 0.00 0.00 4.12
330 354 2.645192 GGCATGTTTCGGGTTGGGG 61.645 63.158 0.00 0.00 0.00 4.96
331 355 2.969827 CATGTTTCGGGTTGGGGC 59.030 61.111 0.00 0.00 0.00 5.80
332 356 1.905843 CATGTTTCGGGTTGGGGCA 60.906 57.895 0.00 0.00 0.00 5.36
333 357 1.906333 ATGTTTCGGGTTGGGGCAC 60.906 57.895 0.00 0.00 0.00 5.01
334 358 3.666253 GTTTCGGGTTGGGGCACG 61.666 66.667 0.00 0.00 36.47 5.34
335 359 3.875023 TTTCGGGTTGGGGCACGA 61.875 61.111 0.00 0.00 43.06 4.35
336 360 4.629523 TTCGGGTTGGGGCACGAC 62.630 66.667 0.00 0.00 44.54 4.34
338 362 4.715523 CGGGTTGGGGCACGACAT 62.716 66.667 9.81 0.00 37.48 3.06
339 363 2.282887 GGGTTGGGGCACGACATT 60.283 61.111 9.81 0.00 34.98 2.71
340 364 1.906333 GGGTTGGGGCACGACATTT 60.906 57.895 9.81 0.00 34.98 2.32
341 365 1.468506 GGGTTGGGGCACGACATTTT 61.469 55.000 9.81 0.00 34.98 1.82
342 366 0.391228 GGTTGGGGCACGACATTTTT 59.609 50.000 9.81 0.00 34.98 1.94
362 386 5.934935 TTTTTCTCCGGTGTCACTATTTC 57.065 39.130 0.00 0.00 0.00 2.17
363 387 4.884668 TTTCTCCGGTGTCACTATTTCT 57.115 40.909 0.00 0.00 0.00 2.52
364 388 3.868757 TCTCCGGTGTCACTATTTCTG 57.131 47.619 0.00 0.00 0.00 3.02
365 389 3.427573 TCTCCGGTGTCACTATTTCTGA 58.572 45.455 0.00 0.00 0.00 3.27
366 390 3.830178 TCTCCGGTGTCACTATTTCTGAA 59.170 43.478 0.00 0.00 0.00 3.02
367 391 3.921677 TCCGGTGTCACTATTTCTGAAC 58.078 45.455 0.00 0.00 0.00 3.18
368 392 3.322541 TCCGGTGTCACTATTTCTGAACA 59.677 43.478 0.00 0.00 0.00 3.18
369 393 4.020573 TCCGGTGTCACTATTTCTGAACAT 60.021 41.667 0.00 0.00 0.00 2.71
370 394 4.093408 CCGGTGTCACTATTTCTGAACATG 59.907 45.833 2.35 0.00 0.00 3.21
371 395 4.436050 CGGTGTCACTATTTCTGAACATGC 60.436 45.833 2.35 0.00 0.00 4.06
372 396 4.697352 GGTGTCACTATTTCTGAACATGCT 59.303 41.667 2.35 0.00 0.00 3.79
373 397 5.391310 GGTGTCACTATTTCTGAACATGCTG 60.391 44.000 2.35 0.00 0.00 4.41
374 398 5.409520 GTGTCACTATTTCTGAACATGCTGA 59.590 40.000 0.00 0.00 0.00 4.26
375 399 5.997129 TGTCACTATTTCTGAACATGCTGAA 59.003 36.000 0.00 0.00 0.00 3.02
376 400 6.656270 TGTCACTATTTCTGAACATGCTGAAT 59.344 34.615 0.00 0.00 0.00 2.57
377 401 7.175467 TGTCACTATTTCTGAACATGCTGAATT 59.825 33.333 0.00 0.00 0.00 2.17
378 402 8.668353 GTCACTATTTCTGAACATGCTGAATTA 58.332 33.333 0.00 0.00 0.00 1.40
379 403 9.399797 TCACTATTTCTGAACATGCTGAATTAT 57.600 29.630 0.00 0.00 0.00 1.28
382 406 9.459640 CTATTTCTGAACATGCTGAATTATTGG 57.540 33.333 0.00 0.00 0.00 3.16
383 407 6.839124 TTCTGAACATGCTGAATTATTGGT 57.161 33.333 0.00 0.00 0.00 3.67
384 408 6.198650 TCTGAACATGCTGAATTATTGGTG 57.801 37.500 0.00 0.00 0.00 4.17
385 409 5.711506 TCTGAACATGCTGAATTATTGGTGT 59.288 36.000 0.00 0.00 0.00 4.16
386 410 6.883756 TCTGAACATGCTGAATTATTGGTGTA 59.116 34.615 0.00 0.00 0.00 2.90
387 411 7.557358 TCTGAACATGCTGAATTATTGGTGTAT 59.443 33.333 0.00 0.00 0.00 2.29
388 412 8.744568 TGAACATGCTGAATTATTGGTGTATA 57.255 30.769 0.00 0.00 0.00 1.47
389 413 8.839343 TGAACATGCTGAATTATTGGTGTATAG 58.161 33.333 0.00 0.00 0.00 1.31
390 414 7.750229 ACATGCTGAATTATTGGTGTATAGG 57.250 36.000 0.00 0.00 0.00 2.57
391 415 6.207417 ACATGCTGAATTATTGGTGTATAGGC 59.793 38.462 0.00 0.00 0.00 3.93
392 416 4.754618 TGCTGAATTATTGGTGTATAGGCG 59.245 41.667 0.00 0.00 0.00 5.52
393 417 4.755123 GCTGAATTATTGGTGTATAGGCGT 59.245 41.667 0.00 0.00 0.00 5.68
394 418 5.334105 GCTGAATTATTGGTGTATAGGCGTG 60.334 44.000 0.00 0.00 0.00 5.34
395 419 5.060506 TGAATTATTGGTGTATAGGCGTGG 58.939 41.667 0.00 0.00 0.00 4.94
396 420 4.699925 ATTATTGGTGTATAGGCGTGGT 57.300 40.909 0.00 0.00 0.00 4.16
397 421 2.325583 ATTGGTGTATAGGCGTGGTG 57.674 50.000 0.00 0.00 0.00 4.17
398 422 0.978151 TTGGTGTATAGGCGTGGTGT 59.022 50.000 0.00 0.00 0.00 4.16
399 423 0.248012 TGGTGTATAGGCGTGGTGTG 59.752 55.000 0.00 0.00 0.00 3.82
400 424 1.087771 GGTGTATAGGCGTGGTGTGC 61.088 60.000 0.00 0.00 0.00 4.57
401 425 0.390603 GTGTATAGGCGTGGTGTGCA 60.391 55.000 0.00 0.00 0.00 4.57
402 426 0.321996 TGTATAGGCGTGGTGTGCAA 59.678 50.000 0.00 0.00 0.00 4.08
403 427 0.725117 GTATAGGCGTGGTGTGCAAC 59.275 55.000 0.00 0.00 37.35 4.17
404 428 0.611200 TATAGGCGTGGTGTGCAACT 59.389 50.000 0.00 0.00 38.04 3.16
405 429 0.955428 ATAGGCGTGGTGTGCAACTG 60.955 55.000 0.00 0.00 38.04 3.16
406 430 2.034048 TAGGCGTGGTGTGCAACTGA 62.034 55.000 0.00 0.00 38.04 3.41
407 431 2.327940 GCGTGGTGTGCAACTGAC 59.672 61.111 0.00 0.00 38.04 3.51
408 432 3.022287 CGTGGTGTGCAACTGACC 58.978 61.111 0.00 0.00 38.04 4.02
409 433 1.817520 CGTGGTGTGCAACTGACCA 60.818 57.895 4.46 4.46 40.21 4.02
410 434 1.165907 CGTGGTGTGCAACTGACCAT 61.166 55.000 10.40 0.00 43.67 3.55
411 435 1.032014 GTGGTGTGCAACTGACCATT 58.968 50.000 10.40 0.00 43.67 3.16
412 436 1.031235 TGGTGTGCAACTGACCATTG 58.969 50.000 4.46 0.00 37.91 2.82
413 437 1.317613 GGTGTGCAACTGACCATTGA 58.682 50.000 0.00 0.00 38.04 2.57
414 438 1.680735 GGTGTGCAACTGACCATTGAA 59.319 47.619 0.00 0.00 38.04 2.69
415 439 2.297033 GGTGTGCAACTGACCATTGAAT 59.703 45.455 0.00 0.00 38.04 2.57
416 440 3.243839 GGTGTGCAACTGACCATTGAATT 60.244 43.478 0.00 0.00 38.04 2.17
417 441 4.022416 GGTGTGCAACTGACCATTGAATTA 60.022 41.667 0.00 0.00 38.04 1.40
418 442 5.156355 GTGTGCAACTGACCATTGAATTAG 58.844 41.667 0.00 0.00 38.04 1.73
426 450 8.573885 CAACTGACCATTGAATTAGATGCATAT 58.426 33.333 0.00 0.00 0.00 1.78
427 451 9.797642 AACTGACCATTGAATTAGATGCATATA 57.202 29.630 0.00 0.00 0.00 0.86
428 452 9.797642 ACTGACCATTGAATTAGATGCATATAA 57.202 29.630 15.65 15.65 0.00 0.98
430 454 8.733458 TGACCATTGAATTAGATGCATATAAGC 58.267 33.333 17.93 12.96 0.00 3.09
452 476 5.384063 CTTAGTCAAGCTCAGTCTCAAGA 57.616 43.478 0.00 0.00 0.00 3.02
453 477 3.658757 AGTCAAGCTCAGTCTCAAGAC 57.341 47.619 1.79 1.79 45.08 3.01
469 493 7.648142 GTCTCAAGACATCTCTACTCCTAATG 58.352 42.308 5.28 0.00 44.18 1.90
471 495 6.673583 TCAAGACATCTCTACTCCTAATGGA 58.326 40.000 0.00 0.00 40.69 3.41
480 504 3.300032 TCCTAATGGAGCAGTCGGT 57.700 52.632 0.00 0.00 37.46 4.69
481 505 2.447408 TCCTAATGGAGCAGTCGGTA 57.553 50.000 0.00 0.00 37.46 4.02
484 508 2.034812 CCTAATGGAGCAGTCGGTAGTC 59.965 54.545 0.00 0.00 34.57 2.59
485 509 1.853963 AATGGAGCAGTCGGTAGTCT 58.146 50.000 0.00 0.00 0.00 3.24
486 510 1.394618 ATGGAGCAGTCGGTAGTCTC 58.605 55.000 0.00 0.00 0.00 3.36
487 511 0.680280 TGGAGCAGTCGGTAGTCTCC 60.680 60.000 0.00 0.00 42.67 3.71
494 518 3.885521 CGGTAGTCTCCGCCGGTC 61.886 72.222 1.63 0.00 43.96 4.79
496 520 2.345760 GGTAGTCTCCGCCGGTCAA 61.346 63.158 1.63 0.00 0.00 3.18
497 521 1.673808 GGTAGTCTCCGCCGGTCAAT 61.674 60.000 1.63 0.00 0.00 2.57
499 523 0.899720 TAGTCTCCGCCGGTCAATTT 59.100 50.000 1.63 0.00 0.00 1.82
501 525 0.446616 GTCTCCGCCGGTCAATTTTC 59.553 55.000 1.63 0.00 0.00 2.29
503 527 1.296056 CTCCGCCGGTCAATTTTCGT 61.296 55.000 1.63 0.00 0.00 3.85
505 529 1.133869 CGCCGGTCAATTTTCGTCC 59.866 57.895 1.90 0.00 0.00 4.79
506 530 1.504900 GCCGGTCAATTTTCGTCCC 59.495 57.895 1.90 0.00 0.00 4.46
508 748 0.519961 CCGGTCAATTTTCGTCCCAC 59.480 55.000 0.00 0.00 0.00 4.61
514 754 2.370519 TCAATTTTCGTCCCACCAGAGA 59.629 45.455 0.00 0.00 0.00 3.10
520 760 0.324943 CGTCCCACCAGAGATGGTTT 59.675 55.000 0.00 0.00 40.85 3.27
523 763 3.370527 CGTCCCACCAGAGATGGTTTATT 60.371 47.826 0.00 0.00 40.85 1.40
526 766 5.125578 GTCCCACCAGAGATGGTTTATTTTC 59.874 44.000 0.00 0.00 40.85 2.29
528 768 4.700213 CCACCAGAGATGGTTTATTTTCGT 59.300 41.667 0.00 0.00 40.85 3.85
530 770 4.941873 ACCAGAGATGGTTTATTTTCGTCC 59.058 41.667 0.00 0.00 39.57 4.79
532 772 5.294552 CCAGAGATGGTTTATTTTCGTCCTC 59.705 44.000 0.00 0.00 0.00 3.71
533 773 5.294552 CAGAGATGGTTTATTTTCGTCCTCC 59.705 44.000 0.00 0.00 0.00 4.30
535 775 5.429130 AGATGGTTTATTTTCGTCCTCCTC 58.571 41.667 0.00 0.00 0.00 3.71
536 776 3.592059 TGGTTTATTTTCGTCCTCCTCG 58.408 45.455 0.00 0.00 0.00 4.63
537 777 2.350804 GGTTTATTTTCGTCCTCCTCGC 59.649 50.000 0.00 0.00 0.00 5.03
538 778 2.997986 GTTTATTTTCGTCCTCCTCGCA 59.002 45.455 0.00 0.00 0.00 5.10
540 780 0.391263 ATTTTCGTCCTCCTCGCACC 60.391 55.000 0.00 0.00 0.00 5.01
542 782 1.874345 TTTCGTCCTCCTCGCACCTC 61.874 60.000 0.00 0.00 0.00 3.85
544 784 2.680352 GTCCTCCTCGCACCTCCA 60.680 66.667 0.00 0.00 0.00 3.86
560 800 2.722201 CCAGGTAGTCCCCTCGCAC 61.722 68.421 0.00 0.00 30.33 5.34
562 802 4.509737 GGTAGTCCCCTCGCACGC 62.510 72.222 0.00 0.00 0.00 5.34
585 828 1.600023 AAAAATCGAGCGAACCCACA 58.400 45.000 0.00 0.00 0.00 4.17
592 835 1.084289 GAGCGAACCCACATTACCAC 58.916 55.000 0.00 0.00 0.00 4.16
595 838 0.320946 CGAACCCACATTACCACGGT 60.321 55.000 0.00 0.00 0.00 4.83
597 840 0.891904 AACCCACATTACCACGGTGC 60.892 55.000 1.68 0.00 0.00 5.01
599 842 1.374885 CCACATTACCACGGTGCGA 60.375 57.895 1.68 0.00 0.00 5.10
603 846 1.817941 ATTACCACGGTGCGATGCC 60.818 57.895 1.68 0.00 0.00 4.40
615 858 1.365633 CGATGCCTCCAGCTACTCC 59.634 63.158 0.00 0.00 44.23 3.85
618 861 2.041405 GCCTCCAGCTACTCCCCT 60.041 66.667 0.00 0.00 38.99 4.79
621 864 2.442272 TCCAGCTACTCCCCTCGC 60.442 66.667 0.00 0.00 0.00 5.03
622 865 2.759973 CCAGCTACTCCCCTCGCA 60.760 66.667 0.00 0.00 0.00 5.10
625 868 4.228567 GCTACTCCCCTCGCAGCC 62.229 72.222 0.00 0.00 0.00 4.85
626 869 2.759973 CTACTCCCCTCGCAGCCA 60.760 66.667 0.00 0.00 0.00 4.75
627 870 2.284331 TACTCCCCTCGCAGCCAA 60.284 61.111 0.00 0.00 0.00 4.52
629 872 3.710722 CTCCCCTCGCAGCCAAGT 61.711 66.667 0.00 0.00 0.00 3.16
630 873 2.284331 TCCCCTCGCAGCCAAGTA 60.284 61.111 0.00 0.00 0.00 2.24
633 876 0.394352 CCCCTCGCAGCCAAGTAAAT 60.394 55.000 0.00 0.00 0.00 1.40
652 895 7.347448 AGTAAATCGAACAAAAGTAAACCGAC 58.653 34.615 0.00 0.00 0.00 4.79
663 906 4.801147 AGTAAACCGACGAAAGAAAACC 57.199 40.909 0.00 0.00 0.00 3.27
736 1124 1.070445 GGTGCCCTCCATCATCTCG 59.930 63.158 0.00 0.00 0.00 4.04
755 1143 0.739561 GCTACGAGGACGAGAACCAT 59.260 55.000 0.00 0.00 42.66 3.55
763 1151 0.600255 GACGAGAACCATATGCCCCG 60.600 60.000 0.00 0.00 0.00 5.73
844 1232 1.327764 CCGTTTCTTTATCAGCCGCTC 59.672 52.381 0.00 0.00 0.00 5.03
845 1233 1.005975 CGTTTCTTTATCAGCCGCTCG 60.006 52.381 0.00 0.00 0.00 5.03
846 1234 1.006832 TTTCTTTATCAGCCGCTCGC 58.993 50.000 0.00 0.00 37.98 5.03
847 1235 0.108377 TTCTTTATCAGCCGCTCGCA 60.108 50.000 0.00 0.00 41.38 5.10
848 1236 0.104855 TCTTTATCAGCCGCTCGCAT 59.895 50.000 0.00 0.00 41.38 4.73
849 1237 0.510359 CTTTATCAGCCGCTCGCATC 59.490 55.000 0.00 0.00 41.38 3.91
858 1246 3.928769 GCTCGCATCGCATCGCAA 61.929 61.111 0.00 0.00 0.00 4.85
882 1270 3.537874 CGTCCCCGATCCCCTGAC 61.538 72.222 0.00 0.00 35.63 3.51
893 1281 1.304464 CCCCTGACCAAAGGAAGGC 60.304 63.158 0.00 0.00 40.02 4.35
896 1284 0.178992 CCTGACCAAAGGAAGGCACA 60.179 55.000 0.00 0.00 40.02 4.57
897 1285 1.242076 CTGACCAAAGGAAGGCACAG 58.758 55.000 0.00 0.00 0.00 3.66
912 1300 0.689623 CACAGCCCTTGTCCTCTCTT 59.310 55.000 0.00 0.00 38.16 2.85
929 1317 2.494073 CTCTTCTCTAGGGTTTCAGCGT 59.506 50.000 0.00 0.00 0.00 5.07
965 1364 4.262549 CCTGCCAGAAAGATATCAGGAGAG 60.263 50.000 5.32 0.00 42.64 3.20
970 1369 1.638529 AAGATATCAGGAGAGGCCGG 58.361 55.000 5.32 0.00 43.43 6.13
1196 2166 0.527817 GCGGATTCGTGAGTACCCAG 60.528 60.000 0.00 0.00 38.89 4.45
1197 2167 0.815734 CGGATTCGTGAGTACCCAGT 59.184 55.000 0.00 0.00 0.00 4.00
1200 2170 3.733077 CGGATTCGTGAGTACCCAGTTAC 60.733 52.174 0.00 0.00 0.00 2.50
1257 2295 8.561932 TCGATTCATCTTCAGTAGTTAATTCG 57.438 34.615 0.00 0.00 0.00 3.34
1268 2306 7.906160 TCAGTAGTTAATTCGCTTGCTTAATC 58.094 34.615 0.00 0.00 0.00 1.75
1308 2348 1.906990 ATGCCTAGATGGATGCTTGC 58.093 50.000 0.00 0.00 38.35 4.01
1329 2369 0.544595 AGGTTACGTTCTGGGAGGCT 60.545 55.000 0.00 0.00 0.00 4.58
1346 2387 3.944250 CTGAGGCGCCATTGGGGTT 62.944 63.158 31.54 4.27 39.65 4.11
1362 2404 1.310904 GGTTTGCTTGGGAACGTACA 58.689 50.000 0.00 0.00 0.00 2.90
1409 2471 4.785453 CCAGAGGTCCAAGGCGCC 62.785 72.222 21.89 21.89 0.00 6.53
1410 2472 4.020617 CAGAGGTCCAAGGCGCCA 62.021 66.667 31.54 4.11 0.00 5.69
1411 2473 4.021925 AGAGGTCCAAGGCGCCAC 62.022 66.667 31.54 18.16 0.00 5.01
1412 2474 4.329545 GAGGTCCAAGGCGCCACA 62.330 66.667 31.54 5.78 0.00 4.17
1413 2475 3.842925 GAGGTCCAAGGCGCCACAA 62.843 63.158 31.54 8.10 0.00 3.33
1414 2476 3.365265 GGTCCAAGGCGCCACAAG 61.365 66.667 31.54 14.47 0.00 3.16
1608 2742 4.370049 TCGTTTGATTGTTAGTCGGTGAA 58.630 39.130 0.00 0.00 0.00 3.18
1700 2834 5.593909 TCATCTGCCAACTCTCTTTTTGAAA 59.406 36.000 0.00 0.00 0.00 2.69
1732 2870 8.128582 TCGGTCAACTTAATTAATCAATCATGC 58.871 33.333 0.00 0.00 0.00 4.06
1755 3547 4.201812 CCGAATTGTAGACGCATGATGTTT 60.202 41.667 0.00 0.00 0.00 2.83
1803 3595 8.480853 CGATATTTACAGAAACTTCCGAATCTC 58.519 37.037 0.00 0.00 0.00 2.75
1805 3597 7.602517 ATTTACAGAAACTTCCGAATCTCAG 57.397 36.000 0.00 0.00 0.00 3.35
1806 3598 4.608948 ACAGAAACTTCCGAATCTCAGT 57.391 40.909 0.00 0.00 0.00 3.41
1807 3599 4.962155 ACAGAAACTTCCGAATCTCAGTT 58.038 39.130 0.00 0.00 0.00 3.16
1808 3600 4.752101 ACAGAAACTTCCGAATCTCAGTTG 59.248 41.667 0.00 0.00 29.78 3.16
1809 3601 4.752101 CAGAAACTTCCGAATCTCAGTTGT 59.248 41.667 0.00 0.00 29.78 3.32
1824 3637 6.891388 TCTCAGTTGTACCTTCCAGTTTTAA 58.109 36.000 0.00 0.00 0.00 1.52
1901 3716 5.343249 TCATCACATCTGTCGATACACAAG 58.657 41.667 0.00 0.00 0.00 3.16
1903 3718 5.582689 TCACATCTGTCGATACACAAGAT 57.417 39.130 0.00 0.00 0.00 2.40
1904 3719 5.343249 TCACATCTGTCGATACACAAGATG 58.657 41.667 8.93 8.93 37.62 2.90
1906 3721 4.402474 ACATCTGTCGATACACAAGATGGA 59.598 41.667 13.74 0.00 36.84 3.41
1907 3722 4.639135 TCTGTCGATACACAAGATGGAG 57.361 45.455 0.00 0.00 0.00 3.86
1910 3725 3.119137 TGTCGATACACAAGATGGAGGTG 60.119 47.826 0.00 0.00 38.47 4.00
1911 3726 2.159099 TCGATACACAAGATGGAGGTGC 60.159 50.000 0.00 0.00 36.00 5.01
1912 3727 2.159043 CGATACACAAGATGGAGGTGCT 60.159 50.000 0.00 0.00 36.00 4.40
1913 3728 3.462021 GATACACAAGATGGAGGTGCTC 58.538 50.000 0.00 0.00 36.00 4.26
1953 3776 5.191124 ACCGGATAGTTTCCAGACCTTTATT 59.809 40.000 9.46 0.00 45.78 1.40
2103 3926 0.179045 AGCCGGATAACCTCACATGC 60.179 55.000 5.05 0.00 0.00 4.06
2117 3940 4.135306 CTCACATGCTGCCTTCTAATGAT 58.865 43.478 0.00 0.00 0.00 2.45
2364 4200 2.972713 AGTTCAGGGCAGAGTTCAGTTA 59.027 45.455 0.00 0.00 0.00 2.24
2608 5372 8.213518 CATATATATATGTCCCCTGTTGCAAC 57.786 38.462 22.83 22.83 36.31 4.17
2674 5688 6.432581 AGGGAGGTGAGTTTCTTTAACTTTT 58.567 36.000 0.00 0.00 47.00 2.27
2744 5758 0.108281 GGAAGGTTCGCCACTAGACC 60.108 60.000 0.00 0.00 40.60 3.85
3128 6159 0.881118 CCACACCACCGGAAATTCTG 59.119 55.000 9.46 0.00 0.00 3.02
3138 6169 2.171448 CCGGAAATTCTGATGGAGACCT 59.829 50.000 2.89 0.00 0.00 3.85
3237 6268 8.200792 AGATTCTTCTACATGGTGACTATTGAC 58.799 37.037 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 9.317936 GATATAGAATCATAATCATGAACGCCA 57.682 33.333 0.00 0.00 44.27 5.69
53 54 7.381323 CCAGCCGCATATGATATAGAATCATA 58.619 38.462 6.97 9.47 42.90 2.15
64 65 0.109153 TCAAGCCAGCCGCATATGAT 59.891 50.000 6.97 0.00 41.38 2.45
65 66 0.107263 TTCAAGCCAGCCGCATATGA 60.107 50.000 6.97 0.00 41.38 2.15
66 67 0.740149 TTTCAAGCCAGCCGCATATG 59.260 50.000 0.00 0.00 41.38 1.78
67 68 0.740737 GTTTCAAGCCAGCCGCATAT 59.259 50.000 0.00 0.00 41.38 1.78
68 69 0.607762 TGTTTCAAGCCAGCCGCATA 60.608 50.000 0.00 0.00 41.38 3.14
69 70 1.252904 ATGTTTCAAGCCAGCCGCAT 61.253 50.000 0.00 0.00 41.38 4.73
70 71 0.607762 TATGTTTCAAGCCAGCCGCA 60.608 50.000 0.00 0.00 41.38 5.69
71 72 0.525761 TTATGTTTCAAGCCAGCCGC 59.474 50.000 0.00 0.00 37.98 6.53
72 73 2.423185 TCATTATGTTTCAAGCCAGCCG 59.577 45.455 0.00 0.00 0.00 5.52
73 74 3.445096 ACTCATTATGTTTCAAGCCAGCC 59.555 43.478 0.00 0.00 0.00 4.85
74 75 4.156556 TCACTCATTATGTTTCAAGCCAGC 59.843 41.667 0.00 0.00 0.00 4.85
75 76 5.885230 TCACTCATTATGTTTCAAGCCAG 57.115 39.130 0.00 0.00 0.00 4.85
76 77 5.711506 ACATCACTCATTATGTTTCAAGCCA 59.288 36.000 0.00 0.00 32.43 4.75
77 78 6.199937 ACATCACTCATTATGTTTCAAGCC 57.800 37.500 0.00 0.00 32.43 4.35
78 79 9.282247 CTTTACATCACTCATTATGTTTCAAGC 57.718 33.333 0.00 0.00 37.50 4.01
85 86 9.684448 CGATCTACTTTACATCACTCATTATGT 57.316 33.333 0.00 0.00 39.56 2.29
86 87 9.899226 TCGATCTACTTTACATCACTCATTATG 57.101 33.333 0.00 0.00 0.00 1.90
89 90 7.429633 CCTCGATCTACTTTACATCACTCATT 58.570 38.462 0.00 0.00 0.00 2.57
90 91 6.015856 CCCTCGATCTACTTTACATCACTCAT 60.016 42.308 0.00 0.00 0.00 2.90
91 92 5.299531 CCCTCGATCTACTTTACATCACTCA 59.700 44.000 0.00 0.00 0.00 3.41
92 93 5.531659 TCCCTCGATCTACTTTACATCACTC 59.468 44.000 0.00 0.00 0.00 3.51
93 94 5.446860 TCCCTCGATCTACTTTACATCACT 58.553 41.667 0.00 0.00 0.00 3.41
95 96 6.576662 GATCCCTCGATCTACTTTACATCA 57.423 41.667 0.00 0.00 41.59 3.07
112 113 0.688087 GACCACCCTTCGAGATCCCT 60.688 60.000 0.00 0.00 0.00 4.20
114 115 1.035932 TCGACCACCCTTCGAGATCC 61.036 60.000 0.00 0.00 40.51 3.36
115 116 2.490165 TCGACCACCCTTCGAGATC 58.510 57.895 0.00 0.00 40.51 2.75
116 117 4.757773 TCGACCACCCTTCGAGAT 57.242 55.556 0.00 0.00 40.51 2.75
122 123 1.280998 CAAACCCTATCGACCACCCTT 59.719 52.381 0.00 0.00 0.00 3.95
123 124 0.909623 CAAACCCTATCGACCACCCT 59.090 55.000 0.00 0.00 0.00 4.34
125 126 0.107361 CCCAAACCCTATCGACCACC 60.107 60.000 0.00 0.00 0.00 4.61
127 128 1.202099 TGCCCAAACCCTATCGACCA 61.202 55.000 0.00 0.00 0.00 4.02
128 129 0.746923 GTGCCCAAACCCTATCGACC 60.747 60.000 0.00 0.00 0.00 4.79
129 130 0.252197 AGTGCCCAAACCCTATCGAC 59.748 55.000 0.00 0.00 0.00 4.20
130 131 0.988832 AAGTGCCCAAACCCTATCGA 59.011 50.000 0.00 0.00 0.00 3.59
132 133 2.215942 ACAAGTGCCCAAACCCTATC 57.784 50.000 0.00 0.00 0.00 2.08
133 134 2.158385 TCAACAAGTGCCCAAACCCTAT 60.158 45.455 0.00 0.00 0.00 2.57
134 135 1.215673 TCAACAAGTGCCCAAACCCTA 59.784 47.619 0.00 0.00 0.00 3.53
135 136 0.032615 TCAACAAGTGCCCAAACCCT 60.033 50.000 0.00 0.00 0.00 4.34
136 137 0.827368 TTCAACAAGTGCCCAAACCC 59.173 50.000 0.00 0.00 0.00 4.11
137 138 2.908688 ATTCAACAAGTGCCCAAACC 57.091 45.000 0.00 0.00 0.00 3.27
138 139 4.584327 ACTATTCAACAAGTGCCCAAAC 57.416 40.909 0.00 0.00 0.00 2.93
139 140 4.764823 CCTACTATTCAACAAGTGCCCAAA 59.235 41.667 0.00 0.00 0.00 3.28
140 141 4.331968 CCTACTATTCAACAAGTGCCCAA 58.668 43.478 0.00 0.00 0.00 4.12
141 142 3.872240 GCCTACTATTCAACAAGTGCCCA 60.872 47.826 0.00 0.00 0.00 5.36
142 143 2.683362 GCCTACTATTCAACAAGTGCCC 59.317 50.000 0.00 0.00 0.00 5.36
144 145 5.292101 CACTAGCCTACTATTCAACAAGTGC 59.708 44.000 0.00 0.00 0.00 4.40
145 146 6.398918 ACACTAGCCTACTATTCAACAAGTG 58.601 40.000 0.00 0.00 0.00 3.16
146 147 6.607004 ACACTAGCCTACTATTCAACAAGT 57.393 37.500 0.00 0.00 0.00 3.16
147 148 7.097192 TGAACACTAGCCTACTATTCAACAAG 58.903 38.462 0.00 0.00 0.00 3.16
149 150 6.599356 TGAACACTAGCCTACTATTCAACA 57.401 37.500 0.00 0.00 0.00 3.33
154 155 5.425539 ACACCATGAACACTAGCCTACTATT 59.574 40.000 0.00 0.00 0.00 1.73
155 156 4.962995 ACACCATGAACACTAGCCTACTAT 59.037 41.667 0.00 0.00 0.00 2.12
156 157 4.159693 CACACCATGAACACTAGCCTACTA 59.840 45.833 0.00 0.00 0.00 1.82
159 160 3.169908 TCACACCATGAACACTAGCCTA 58.830 45.455 0.00 0.00 33.02 3.93
160 161 1.977854 TCACACCATGAACACTAGCCT 59.022 47.619 0.00 0.00 33.02 4.58
163 164 4.887748 AGTCTTCACACCATGAACACTAG 58.112 43.478 0.00 0.00 42.73 2.57
164 165 4.343814 TGAGTCTTCACACCATGAACACTA 59.656 41.667 0.00 0.00 44.05 2.74
165 166 3.134623 TGAGTCTTCACACCATGAACACT 59.865 43.478 0.00 0.00 45.95 3.55
166 167 3.466836 TGAGTCTTCACACCATGAACAC 58.533 45.455 0.00 0.00 42.62 3.32
167 168 3.836365 TGAGTCTTCACACCATGAACA 57.164 42.857 0.00 0.00 42.62 3.18
168 169 6.201806 GCTATATGAGTCTTCACACCATGAAC 59.798 42.308 0.00 0.00 42.62 3.18
169 170 6.127083 TGCTATATGAGTCTTCACACCATGAA 60.127 38.462 0.00 0.00 45.39 2.57
170 171 5.363580 TGCTATATGAGTCTTCACACCATGA 59.636 40.000 0.00 0.00 35.83 3.07
173 174 5.675684 TTGCTATATGAGTCTTCACACCA 57.324 39.130 0.00 0.00 35.83 4.17
174 175 6.985188 TTTTGCTATATGAGTCTTCACACC 57.015 37.500 0.00 0.00 35.83 4.16
175 176 8.333908 CAGATTTTGCTATATGAGTCTTCACAC 58.666 37.037 0.00 0.00 35.83 3.82
177 178 8.430801 ACAGATTTTGCTATATGAGTCTTCAC 57.569 34.615 0.00 0.00 35.83 3.18
180 181 8.798859 ACAACAGATTTTGCTATATGAGTCTT 57.201 30.769 0.00 0.00 0.00 3.01
181 182 8.671921 CAACAACAGATTTTGCTATATGAGTCT 58.328 33.333 0.00 0.00 0.00 3.24
183 184 7.253422 GCAACAACAGATTTTGCTATATGAGT 58.747 34.615 0.00 0.00 41.98 3.41
184 185 6.412943 CGCAACAACAGATTTTGCTATATGAG 59.587 38.462 4.22 0.00 42.86 2.90
186 187 5.456497 CCGCAACAACAGATTTTGCTATATG 59.544 40.000 4.22 0.00 42.86 1.78
187 188 5.125417 ACCGCAACAACAGATTTTGCTATAT 59.875 36.000 4.22 0.00 42.86 0.86
188 189 4.457603 ACCGCAACAACAGATTTTGCTATA 59.542 37.500 4.22 0.00 42.86 1.31
189 190 3.255642 ACCGCAACAACAGATTTTGCTAT 59.744 39.130 4.22 0.00 42.86 2.97
190 191 2.621055 ACCGCAACAACAGATTTTGCTA 59.379 40.909 4.22 0.00 42.86 3.49
191 192 1.408702 ACCGCAACAACAGATTTTGCT 59.591 42.857 4.22 0.00 42.86 3.91
194 195 1.537990 GGCACCGCAACAACAGATTTT 60.538 47.619 0.00 0.00 0.00 1.82
195 196 0.031994 GGCACCGCAACAACAGATTT 59.968 50.000 0.00 0.00 0.00 2.17
196 197 0.823356 AGGCACCGCAACAACAGATT 60.823 50.000 0.00 0.00 0.00 2.40
197 198 0.823356 AAGGCACCGCAACAACAGAT 60.823 50.000 0.00 0.00 0.00 2.90
200 224 2.804167 CAAGGCACCGCAACAACA 59.196 55.556 0.00 0.00 0.00 3.33
202 226 4.263209 CGCAAGGCACCGCAACAA 62.263 61.111 0.00 0.00 0.00 2.83
204 228 4.264638 AACGCAAGGCACCGCAAC 62.265 61.111 0.00 0.00 46.39 4.17
208 232 4.025401 GTGGAACGCAAGGCACCG 62.025 66.667 0.00 0.00 46.39 4.94
219 243 1.614317 CCAGTCCATCTTGGGTGGAAC 60.614 57.143 0.69 0.00 46.67 3.62
221 245 0.475632 ACCAGTCCATCTTGGGTGGA 60.476 55.000 17.65 4.90 41.72 4.02
222 246 0.405585 AACCAGTCCATCTTGGGTGG 59.594 55.000 11.96 11.96 43.54 4.61
223 247 1.073763 TCAACCAGTCCATCTTGGGTG 59.926 52.381 2.18 2.18 40.30 4.61
227 251 3.077359 GACCTTCAACCAGTCCATCTTG 58.923 50.000 0.00 0.00 0.00 3.02
228 252 2.711009 TGACCTTCAACCAGTCCATCTT 59.289 45.455 0.00 0.00 0.00 2.40
229 253 2.338809 TGACCTTCAACCAGTCCATCT 58.661 47.619 0.00 0.00 0.00 2.90
231 255 3.181429 ACATTGACCTTCAACCAGTCCAT 60.181 43.478 0.00 0.00 39.45 3.41
233 257 2.814336 GACATTGACCTTCAACCAGTCC 59.186 50.000 0.00 0.00 39.45 3.85
235 259 2.104111 TCGACATTGACCTTCAACCAGT 59.896 45.455 0.00 0.00 39.45 4.00
236 260 2.766313 TCGACATTGACCTTCAACCAG 58.234 47.619 0.00 0.00 39.45 4.00
239 263 2.159517 GCCATCGACATTGACCTTCAAC 60.160 50.000 0.00 0.00 39.45 3.18
241 265 1.737838 GCCATCGACATTGACCTTCA 58.262 50.000 0.00 0.00 0.00 3.02
243 267 1.369091 GCGCCATCGACATTGACCTT 61.369 55.000 0.00 0.00 38.10 3.50
244 268 1.815421 GCGCCATCGACATTGACCT 60.815 57.895 0.00 0.00 38.10 3.85
245 269 2.709475 GCGCCATCGACATTGACC 59.291 61.111 0.00 0.00 38.10 4.02
246 270 2.709475 GGCGCCATCGACATTGAC 59.291 61.111 24.80 0.00 44.84 3.18
254 278 0.523968 CTTTTGTCATGGCGCCATCG 60.524 55.000 38.60 30.20 33.90 3.84
255 279 0.179129 CCTTTTGTCATGGCGCCATC 60.179 55.000 38.60 27.80 33.90 3.51
256 280 0.611618 TCCTTTTGTCATGGCGCCAT 60.612 50.000 36.10 36.10 37.08 4.40
257 281 1.228398 TCCTTTTGTCATGGCGCCA 60.228 52.632 34.80 34.80 0.00 5.69
258 282 1.508088 CTCCTTTTGTCATGGCGCC 59.492 57.895 22.73 22.73 0.00 6.53
259 283 0.960364 TCCTCCTTTTGTCATGGCGC 60.960 55.000 0.00 0.00 0.00 6.53
260 284 1.470098 CTTCCTCCTTTTGTCATGGCG 59.530 52.381 0.00 0.00 0.00 5.69
261 285 2.795329 TCTTCCTCCTTTTGTCATGGC 58.205 47.619 0.00 0.00 0.00 4.40
262 286 5.259632 AGATTCTTCCTCCTTTTGTCATGG 58.740 41.667 0.00 0.00 0.00 3.66
263 287 6.093771 CAGAGATTCTTCCTCCTTTTGTCATG 59.906 42.308 0.00 0.00 0.00 3.07
264 288 6.179040 CAGAGATTCTTCCTCCTTTTGTCAT 58.821 40.000 0.00 0.00 0.00 3.06
265 289 5.513788 CCAGAGATTCTTCCTCCTTTTGTCA 60.514 44.000 0.00 0.00 0.00 3.58
266 290 4.940654 CCAGAGATTCTTCCTCCTTTTGTC 59.059 45.833 0.00 0.00 0.00 3.18
267 291 4.809007 GCCAGAGATTCTTCCTCCTTTTGT 60.809 45.833 0.00 0.00 0.00 2.83
268 292 3.693578 GCCAGAGATTCTTCCTCCTTTTG 59.306 47.826 0.00 0.00 0.00 2.44
269 293 3.620966 CGCCAGAGATTCTTCCTCCTTTT 60.621 47.826 0.00 0.00 0.00 2.27
270 294 2.093235 CGCCAGAGATTCTTCCTCCTTT 60.093 50.000 0.00 0.00 0.00 3.11
271 295 1.484240 CGCCAGAGATTCTTCCTCCTT 59.516 52.381 0.00 0.00 0.00 3.36
272 296 1.118838 CGCCAGAGATTCTTCCTCCT 58.881 55.000 0.00 0.00 0.00 3.69
273 297 0.105778 CCGCCAGAGATTCTTCCTCC 59.894 60.000 0.00 0.00 0.00 4.30
274 298 1.068434 CTCCGCCAGAGATTCTTCCTC 59.932 57.143 0.00 0.00 46.50 3.71
275 299 1.118838 CTCCGCCAGAGATTCTTCCT 58.881 55.000 0.00 0.00 46.50 3.36
276 300 0.105778 CCTCCGCCAGAGATTCTTCC 59.894 60.000 0.00 0.00 46.50 3.46
277 301 1.068434 CTCCTCCGCCAGAGATTCTTC 59.932 57.143 0.00 0.00 46.50 2.87
278 302 1.118838 CTCCTCCGCCAGAGATTCTT 58.881 55.000 0.00 0.00 46.50 2.52
279 303 0.032615 ACTCCTCCGCCAGAGATTCT 60.033 55.000 0.00 0.00 46.50 2.40
280 304 0.103937 CACTCCTCCGCCAGAGATTC 59.896 60.000 0.00 0.00 46.50 2.52
281 305 0.324738 TCACTCCTCCGCCAGAGATT 60.325 55.000 0.00 0.00 46.50 2.40
282 306 1.040339 GTCACTCCTCCGCCAGAGAT 61.040 60.000 0.00 0.00 46.50 2.75
283 307 1.679305 GTCACTCCTCCGCCAGAGA 60.679 63.158 0.00 0.00 46.50 3.10
284 308 2.716017 GGTCACTCCTCCGCCAGAG 61.716 68.421 0.00 0.00 42.83 3.35
285 309 2.680352 GGTCACTCCTCCGCCAGA 60.680 66.667 0.00 0.00 0.00 3.86
286 310 4.135153 CGGTCACTCCTCCGCCAG 62.135 72.222 0.00 0.00 40.28 4.85
287 311 4.671590 TCGGTCACTCCTCCGCCA 62.672 66.667 0.00 0.00 45.44 5.69
288 312 4.131088 GTCGGTCACTCCTCCGCC 62.131 72.222 0.00 0.00 45.44 6.13
289 313 4.131088 GGTCGGTCACTCCTCCGC 62.131 72.222 0.00 0.00 45.44 5.54
290 314 2.675423 TGGTCGGTCACTCCTCCG 60.675 66.667 0.00 0.00 46.93 4.63
291 315 2.647158 GGTGGTCGGTCACTCCTCC 61.647 68.421 8.48 0.00 37.75 4.30
292 316 1.258445 ATGGTGGTCGGTCACTCCTC 61.258 60.000 8.48 0.00 37.75 3.71
293 317 1.229209 ATGGTGGTCGGTCACTCCT 60.229 57.895 8.48 0.00 37.75 3.69
294 318 1.079127 CATGGTGGTCGGTCACTCC 60.079 63.158 8.48 0.00 37.75 3.85
295 319 1.079127 CCATGGTGGTCGGTCACTC 60.079 63.158 2.57 1.65 37.75 3.51
296 320 3.068881 CCATGGTGGTCGGTCACT 58.931 61.111 2.57 0.00 37.75 3.41
297 321 2.746277 GCCATGGTGGTCGGTCAC 60.746 66.667 14.67 1.32 40.46 3.67
298 322 2.601702 ATGCCATGGTGGTCGGTCA 61.602 57.895 14.67 0.00 40.46 4.02
299 323 2.114670 CATGCCATGGTGGTCGGTC 61.115 63.158 14.67 0.00 40.46 4.79
300 324 2.045045 CATGCCATGGTGGTCGGT 60.045 61.111 14.67 0.00 40.46 4.69
301 325 1.250154 AAACATGCCATGGTGGTCGG 61.250 55.000 14.67 0.13 40.46 4.79
302 326 0.171007 GAAACATGCCATGGTGGTCG 59.829 55.000 14.67 0.40 40.46 4.79
303 327 0.171007 CGAAACATGCCATGGTGGTC 59.829 55.000 14.67 6.00 40.46 4.02
304 328 1.250154 CCGAAACATGCCATGGTGGT 61.250 55.000 14.67 6.43 40.46 4.16
305 329 1.512230 CCGAAACATGCCATGGTGG 59.488 57.895 14.67 5.75 41.55 4.61
306 330 1.250154 ACCCGAAACATGCCATGGTG 61.250 55.000 14.67 7.25 33.60 4.17
307 331 0.541764 AACCCGAAACATGCCATGGT 60.542 50.000 14.67 0.00 33.60 3.55
308 332 0.108709 CAACCCGAAACATGCCATGG 60.109 55.000 7.63 7.63 33.60 3.66
309 333 0.108709 CCAACCCGAAACATGCCATG 60.109 55.000 2.40 2.40 0.00 3.66
310 334 1.257055 CCCAACCCGAAACATGCCAT 61.257 55.000 0.00 0.00 0.00 4.40
311 335 1.905843 CCCAACCCGAAACATGCCA 60.906 57.895 0.00 0.00 0.00 4.92
312 336 2.645192 CCCCAACCCGAAACATGCC 61.645 63.158 0.00 0.00 0.00 4.40
313 337 2.969827 CCCCAACCCGAAACATGC 59.030 61.111 0.00 0.00 0.00 4.06
314 338 1.905843 TGCCCCAACCCGAAACATG 60.906 57.895 0.00 0.00 0.00 3.21
315 339 1.906333 GTGCCCCAACCCGAAACAT 60.906 57.895 0.00 0.00 0.00 2.71
316 340 2.519780 GTGCCCCAACCCGAAACA 60.520 61.111 0.00 0.00 0.00 2.83
317 341 3.666253 CGTGCCCCAACCCGAAAC 61.666 66.667 0.00 0.00 0.00 2.78
318 342 3.875023 TCGTGCCCCAACCCGAAA 61.875 61.111 0.00 0.00 0.00 3.46
319 343 4.629523 GTCGTGCCCCAACCCGAA 62.630 66.667 0.00 0.00 0.00 4.30
321 345 4.715523 ATGTCGTGCCCCAACCCG 62.716 66.667 0.00 0.00 0.00 5.28
322 346 1.468506 AAAATGTCGTGCCCCAACCC 61.469 55.000 0.00 0.00 0.00 4.11
323 347 0.391228 AAAAATGTCGTGCCCCAACC 59.609 50.000 0.00 0.00 0.00 3.77
324 348 3.978460 AAAAATGTCGTGCCCCAAC 57.022 47.368 0.00 0.00 0.00 3.77
340 364 5.468746 CAGAAATAGTGACACCGGAGAAAAA 59.531 40.000 9.46 0.00 0.00 1.94
341 365 4.994852 CAGAAATAGTGACACCGGAGAAAA 59.005 41.667 9.46 0.00 0.00 2.29
342 366 4.282449 TCAGAAATAGTGACACCGGAGAAA 59.718 41.667 9.46 0.00 0.00 2.52
343 367 3.830178 TCAGAAATAGTGACACCGGAGAA 59.170 43.478 9.46 0.00 0.00 2.87
344 368 3.427573 TCAGAAATAGTGACACCGGAGA 58.572 45.455 9.46 0.00 0.00 3.71
345 369 3.868757 TCAGAAATAGTGACACCGGAG 57.131 47.619 9.46 1.26 0.00 4.63
346 370 3.322541 TGTTCAGAAATAGTGACACCGGA 59.677 43.478 9.46 0.00 0.00 5.14
347 371 3.659786 TGTTCAGAAATAGTGACACCGG 58.340 45.455 0.00 0.00 0.00 5.28
348 372 4.436050 GCATGTTCAGAAATAGTGACACCG 60.436 45.833 0.84 0.00 0.00 4.94
349 373 4.697352 AGCATGTTCAGAAATAGTGACACC 59.303 41.667 0.84 0.00 0.00 4.16
350 374 5.409520 TCAGCATGTTCAGAAATAGTGACAC 59.590 40.000 0.00 0.00 37.40 3.67
351 375 5.550290 TCAGCATGTTCAGAAATAGTGACA 58.450 37.500 0.00 0.00 37.40 3.58
352 376 6.486253 TTCAGCATGTTCAGAAATAGTGAC 57.514 37.500 0.00 0.00 37.40 3.67
353 377 7.692460 AATTCAGCATGTTCAGAAATAGTGA 57.308 32.000 0.00 0.00 37.40 3.41
356 380 9.459640 CCAATAATTCAGCATGTTCAGAAATAG 57.540 33.333 0.00 0.00 37.40 1.73
357 381 8.970020 ACCAATAATTCAGCATGTTCAGAAATA 58.030 29.630 0.00 0.00 37.40 1.40
358 382 7.762615 CACCAATAATTCAGCATGTTCAGAAAT 59.237 33.333 0.00 0.00 37.40 2.17
359 383 7.092079 CACCAATAATTCAGCATGTTCAGAAA 58.908 34.615 0.00 0.00 37.40 2.52
360 384 6.209192 ACACCAATAATTCAGCATGTTCAGAA 59.791 34.615 0.00 0.00 37.40 3.02
361 385 5.711506 ACACCAATAATTCAGCATGTTCAGA 59.288 36.000 0.00 0.00 37.40 3.27
362 386 5.957798 ACACCAATAATTCAGCATGTTCAG 58.042 37.500 0.00 0.00 37.40 3.02
363 387 5.981088 ACACCAATAATTCAGCATGTTCA 57.019 34.783 0.00 0.00 37.40 3.18
364 388 8.292448 CCTATACACCAATAATTCAGCATGTTC 58.708 37.037 0.00 0.00 37.40 3.18
365 389 7.255590 GCCTATACACCAATAATTCAGCATGTT 60.256 37.037 0.00 0.00 37.40 2.71
366 390 6.207417 GCCTATACACCAATAATTCAGCATGT 59.793 38.462 0.00 0.00 37.40 3.21
367 391 6.615088 GCCTATACACCAATAATTCAGCATG 58.385 40.000 0.00 0.00 37.54 4.06
368 392 5.412594 CGCCTATACACCAATAATTCAGCAT 59.587 40.000 0.00 0.00 0.00 3.79
369 393 4.754618 CGCCTATACACCAATAATTCAGCA 59.245 41.667 0.00 0.00 0.00 4.41
370 394 4.755123 ACGCCTATACACCAATAATTCAGC 59.245 41.667 0.00 0.00 0.00 4.26
371 395 5.179368 CCACGCCTATACACCAATAATTCAG 59.821 44.000 0.00 0.00 0.00 3.02
372 396 5.060506 CCACGCCTATACACCAATAATTCA 58.939 41.667 0.00 0.00 0.00 2.57
373 397 5.049680 CACCACGCCTATACACCAATAATTC 60.050 44.000 0.00 0.00 0.00 2.17
374 398 4.819630 CACCACGCCTATACACCAATAATT 59.180 41.667 0.00 0.00 0.00 1.40
375 399 4.141574 ACACCACGCCTATACACCAATAAT 60.142 41.667 0.00 0.00 0.00 1.28
376 400 3.198200 ACACCACGCCTATACACCAATAA 59.802 43.478 0.00 0.00 0.00 1.40
377 401 2.767394 ACACCACGCCTATACACCAATA 59.233 45.455 0.00 0.00 0.00 1.90
378 402 1.557832 ACACCACGCCTATACACCAAT 59.442 47.619 0.00 0.00 0.00 3.16
379 403 0.978151 ACACCACGCCTATACACCAA 59.022 50.000 0.00 0.00 0.00 3.67
380 404 0.248012 CACACCACGCCTATACACCA 59.752 55.000 0.00 0.00 0.00 4.17
381 405 1.087771 GCACACCACGCCTATACACC 61.088 60.000 0.00 0.00 0.00 4.16
382 406 0.390603 TGCACACCACGCCTATACAC 60.391 55.000 0.00 0.00 0.00 2.90
383 407 0.321996 TTGCACACCACGCCTATACA 59.678 50.000 0.00 0.00 0.00 2.29
384 408 0.725117 GTTGCACACCACGCCTATAC 59.275 55.000 0.00 0.00 0.00 1.47
385 409 0.611200 AGTTGCACACCACGCCTATA 59.389 50.000 0.00 0.00 0.00 1.31
386 410 0.955428 CAGTTGCACACCACGCCTAT 60.955 55.000 0.00 0.00 0.00 2.57
387 411 1.596752 CAGTTGCACACCACGCCTA 60.597 57.895 0.00 0.00 0.00 3.93
388 412 2.901840 CAGTTGCACACCACGCCT 60.902 61.111 0.00 0.00 0.00 5.52
389 413 2.899838 TCAGTTGCACACCACGCC 60.900 61.111 0.00 0.00 0.00 5.68
390 414 2.327940 GTCAGTTGCACACCACGC 59.672 61.111 0.00 0.00 0.00 5.34
391 415 1.165907 ATGGTCAGTTGCACACCACG 61.166 55.000 7.91 0.00 43.05 4.94
392 416 1.032014 AATGGTCAGTTGCACACCAC 58.968 50.000 7.91 0.00 43.05 4.16
393 417 1.031235 CAATGGTCAGTTGCACACCA 58.969 50.000 8.13 8.13 44.36 4.17
394 418 1.317613 TCAATGGTCAGTTGCACACC 58.682 50.000 0.00 0.00 0.00 4.16
395 419 3.648339 ATTCAATGGTCAGTTGCACAC 57.352 42.857 0.00 0.00 0.00 3.82
396 420 5.069318 TCTAATTCAATGGTCAGTTGCACA 58.931 37.500 0.00 0.00 0.00 4.57
397 421 5.627499 TCTAATTCAATGGTCAGTTGCAC 57.373 39.130 0.00 0.00 0.00 4.57
398 422 5.393352 GCATCTAATTCAATGGTCAGTTGCA 60.393 40.000 0.00 0.00 31.95 4.08
399 423 5.039333 GCATCTAATTCAATGGTCAGTTGC 58.961 41.667 3.06 0.00 0.00 4.17
400 424 6.198650 TGCATCTAATTCAATGGTCAGTTG 57.801 37.500 0.00 0.00 0.00 3.16
401 425 8.701908 ATATGCATCTAATTCAATGGTCAGTT 57.298 30.769 0.19 0.00 0.00 3.16
402 426 9.797642 TTATATGCATCTAATTCAATGGTCAGT 57.202 29.630 0.19 0.00 0.00 3.41
404 428 8.733458 GCTTATATGCATCTAATTCAATGGTCA 58.267 33.333 0.19 0.00 0.00 4.02
405 429 8.954350 AGCTTATATGCATCTAATTCAATGGTC 58.046 33.333 0.19 0.00 34.99 4.02
406 430 8.874744 AGCTTATATGCATCTAATTCAATGGT 57.125 30.769 0.19 0.00 34.99 3.55
430 454 5.160641 GTCTTGAGACTGAGCTTGACTAAG 58.839 45.833 3.93 0.00 41.65 2.18
435 459 3.831333 AGATGTCTTGAGACTGAGCTTGA 59.169 43.478 12.00 0.00 44.99 3.02
438 462 3.700538 AGAGATGTCTTGAGACTGAGCT 58.299 45.455 12.00 1.39 44.99 4.09
441 465 5.045213 AGGAGTAGAGATGTCTTGAGACTGA 60.045 44.000 12.00 0.00 44.99 3.41
442 466 5.192927 AGGAGTAGAGATGTCTTGAGACTG 58.807 45.833 12.00 0.00 44.99 3.51
443 467 5.450818 AGGAGTAGAGATGTCTTGAGACT 57.549 43.478 12.00 0.00 44.99 3.24
444 468 7.255451 CCATTAGGAGTAGAGATGTCTTGAGAC 60.255 44.444 0.00 4.20 40.57 3.36
445 469 6.775142 CCATTAGGAGTAGAGATGTCTTGAGA 59.225 42.308 0.00 0.00 36.89 3.27
446 470 6.775142 TCCATTAGGAGTAGAGATGTCTTGAG 59.225 42.308 0.00 0.00 39.61 3.02
448 472 6.968263 TCCATTAGGAGTAGAGATGTCTTG 57.032 41.667 0.00 0.00 39.61 3.02
462 486 2.307768 CTACCGACTGCTCCATTAGGA 58.692 52.381 0.00 0.00 43.21 2.94
464 488 2.952978 AGACTACCGACTGCTCCATTAG 59.047 50.000 0.00 0.00 0.00 1.73
466 490 1.751924 GAGACTACCGACTGCTCCATT 59.248 52.381 0.00 0.00 0.00 3.16
467 491 1.394618 GAGACTACCGACTGCTCCAT 58.605 55.000 0.00 0.00 0.00 3.41
469 493 2.108568 GGAGACTACCGACTGCTCC 58.891 63.158 0.00 0.00 38.45 4.70
479 503 0.175073 AATTGACCGGCGGAGACTAC 59.825 55.000 35.78 15.65 0.00 2.73
480 504 0.899720 AAATTGACCGGCGGAGACTA 59.100 50.000 35.78 19.23 0.00 2.59
481 505 0.036306 AAAATTGACCGGCGGAGACT 59.964 50.000 35.78 10.44 0.00 3.24
484 508 1.296056 ACGAAAATTGACCGGCGGAG 61.296 55.000 35.78 7.40 0.00 4.63
485 509 1.293267 GACGAAAATTGACCGGCGGA 61.293 55.000 35.78 11.41 0.00 5.54
486 510 1.133869 GACGAAAATTGACCGGCGG 59.866 57.895 27.06 27.06 0.00 6.13
487 511 1.133869 GGACGAAAATTGACCGGCG 59.866 57.895 0.00 0.00 30.91 6.46
489 513 0.519961 GTGGGACGAAAATTGACCGG 59.480 55.000 0.00 0.00 0.00 5.28
491 515 1.539827 CTGGTGGGACGAAAATTGACC 59.460 52.381 0.00 0.00 0.00 4.02
492 516 2.484264 CTCTGGTGGGACGAAAATTGAC 59.516 50.000 0.00 0.00 0.00 3.18
494 518 2.778299 TCTCTGGTGGGACGAAAATTG 58.222 47.619 0.00 0.00 0.00 2.32
496 520 2.356125 CCATCTCTGGTGGGACGAAAAT 60.356 50.000 0.00 0.00 37.79 1.82
497 521 1.003118 CCATCTCTGGTGGGACGAAAA 59.997 52.381 0.00 0.00 37.79 2.29
499 523 2.286826 CCATCTCTGGTGGGACGAA 58.713 57.895 0.00 0.00 37.79 3.85
514 754 4.189231 CGAGGAGGACGAAAATAAACCAT 58.811 43.478 0.00 0.00 0.00 3.55
520 760 1.134907 GGTGCGAGGAGGACGAAAATA 60.135 52.381 0.00 0.00 42.62 1.40
523 763 1.874345 GAGGTGCGAGGAGGACGAAA 61.874 60.000 0.00 0.00 42.62 3.46
526 766 3.827898 GGAGGTGCGAGGAGGACG 61.828 72.222 0.00 0.00 42.62 4.79
528 768 2.363018 CTGGAGGTGCGAGGAGGA 60.363 66.667 0.00 0.00 0.00 3.71
540 780 2.128507 GCGAGGGGACTACCTGGAG 61.129 68.421 0.00 0.00 44.43 3.86
542 782 2.363795 TGCGAGGGGACTACCTGG 60.364 66.667 0.00 0.00 44.43 4.45
544 784 2.754658 CGTGCGAGGGGACTACCT 60.755 66.667 0.00 0.00 44.43 3.08
550 790 3.776347 TTTTTGGCGTGCGAGGGGA 62.776 57.895 0.00 0.00 0.00 4.81
551 791 3.291383 TTTTTGGCGTGCGAGGGG 61.291 61.111 0.00 0.00 0.00 4.79
577 820 1.161843 CACCGTGGTAATGTGGGTTC 58.838 55.000 0.00 0.00 0.00 3.62
585 828 1.817941 GGCATCGCACCGTGGTAAT 60.818 57.895 0.00 0.00 0.00 1.89
595 838 2.021068 GAGTAGCTGGAGGCATCGCA 62.021 60.000 0.00 0.00 44.79 5.10
597 840 1.365633 GGAGTAGCTGGAGGCATCG 59.634 63.158 0.00 0.00 44.79 3.84
599 842 1.768077 GGGGAGTAGCTGGAGGCAT 60.768 63.158 0.00 0.00 44.79 4.40
603 846 2.494530 GCGAGGGGAGTAGCTGGAG 61.495 68.421 0.00 0.00 0.00 3.86
609 852 2.303549 CTTGGCTGCGAGGGGAGTAG 62.304 65.000 0.00 0.00 33.52 2.57
615 858 1.017387 GATTTACTTGGCTGCGAGGG 58.983 55.000 0.00 0.00 0.00 4.30
618 861 1.730064 GTTCGATTTACTTGGCTGCGA 59.270 47.619 0.00 0.00 0.00 5.10
621 864 5.519722 ACTTTTGTTCGATTTACTTGGCTG 58.480 37.500 0.00 0.00 0.00 4.85
622 865 5.767816 ACTTTTGTTCGATTTACTTGGCT 57.232 34.783 0.00 0.00 0.00 4.75
625 868 7.851963 TCGGTTTACTTTTGTTCGATTTACTTG 59.148 33.333 0.00 0.00 0.00 3.16
626 869 7.852454 GTCGGTTTACTTTTGTTCGATTTACTT 59.148 33.333 0.00 0.00 0.00 2.24
627 870 7.347448 GTCGGTTTACTTTTGTTCGATTTACT 58.653 34.615 0.00 0.00 0.00 2.24
629 872 6.199908 TCGTCGGTTTACTTTTGTTCGATTTA 59.800 34.615 0.00 0.00 0.00 1.40
630 873 5.006552 TCGTCGGTTTACTTTTGTTCGATTT 59.993 36.000 0.00 0.00 0.00 2.17
633 876 3.443037 TCGTCGGTTTACTTTTGTTCGA 58.557 40.909 0.00 0.00 0.00 3.71
676 919 2.428569 GCGTGCGAGTGAAGACGA 60.429 61.111 0.00 0.00 33.64 4.20
678 921 2.846918 GTGCGTGCGAGTGAAGAC 59.153 61.111 0.00 0.00 0.00 3.01
679 922 2.729491 CGTGCGTGCGAGTGAAGA 60.729 61.111 0.00 0.00 0.00 2.87
736 1124 0.739561 ATGGTTCTCGTCCTCGTAGC 59.260 55.000 0.00 0.00 38.33 3.58
779 1167 4.796495 GGCGGCAAAGGGATCGGT 62.796 66.667 3.07 0.00 0.00 4.69
801 1189 4.328983 GTGGAAAATATCACGCGAAGAGAA 59.671 41.667 15.93 3.37 0.00 2.87
804 1192 2.933906 GGTGGAAAATATCACGCGAAGA 59.066 45.455 15.93 11.26 34.93 2.87
808 1196 1.003851 ACGGTGGAAAATATCACGCG 58.996 50.000 3.53 3.53 34.93 6.01
846 1234 2.645628 GTGCGTTGCGATGCGATG 60.646 61.111 13.48 0.00 40.79 3.84
847 1235 3.864686 GGTGCGTTGCGATGCGAT 61.865 61.111 13.48 0.00 40.79 4.58
866 1254 3.162154 GGTCAGGGGATCGGGGAC 61.162 72.222 0.00 0.00 0.00 4.46
882 1270 3.369921 GGCTGTGCCTTCCTTTGG 58.630 61.111 0.73 0.00 46.69 3.28
893 1281 0.689623 AAGAGAGGACAAGGGCTGTG 59.310 55.000 0.00 0.00 38.84 3.66
896 1284 1.078656 AGAGAAGAGAGGACAAGGGCT 59.921 52.381 0.00 0.00 0.00 5.19
897 1285 1.567357 AGAGAAGAGAGGACAAGGGC 58.433 55.000 0.00 0.00 0.00 5.19
901 1289 4.405756 AACCCTAGAGAAGAGAGGACAA 57.594 45.455 0.00 0.00 31.45 3.18
912 1300 0.809385 CGACGCTGAAACCCTAGAGA 59.191 55.000 0.00 0.00 0.00 3.10
965 1364 2.022240 CTTCTAGCTCTGGACCGGCC 62.022 65.000 0.00 4.32 37.10 6.13
970 1369 4.020543 TCCTTCTTCTTCTAGCTCTGGAC 58.979 47.826 0.00 0.00 0.00 4.02
1196 2166 6.569780 AGAAAGAATTGTTTGTGTGGGTAAC 58.430 36.000 5.14 0.00 0.00 2.50
1197 2167 6.783708 AGAAAGAATTGTTTGTGTGGGTAA 57.216 33.333 5.14 0.00 0.00 2.85
1200 2170 5.049828 GGAAGAAAGAATTGTTTGTGTGGG 58.950 41.667 5.14 0.00 0.00 4.61
1257 2295 1.017387 CGGGACTGGATTAAGCAAGC 58.983 55.000 0.00 0.00 0.00 4.01
1268 2306 2.762535 ACATCAACTAACGGGACTGG 57.237 50.000 0.00 0.00 0.00 4.00
1329 2369 3.521765 AAACCCCAATGGCGCCTCA 62.522 57.895 29.70 8.87 37.83 3.86
1346 2387 0.470766 ACCTGTACGTTCCCAAGCAA 59.529 50.000 0.00 0.00 0.00 3.91
1409 2471 0.528249 GGCAGTTGGTTGTGCTTGTG 60.528 55.000 0.00 0.00 39.76 3.33
1410 2472 0.684153 AGGCAGTTGGTTGTGCTTGT 60.684 50.000 0.00 0.00 39.76 3.16
1411 2473 0.031178 GAGGCAGTTGGTTGTGCTTG 59.969 55.000 0.00 0.00 39.76 4.01
1412 2474 0.106519 AGAGGCAGTTGGTTGTGCTT 60.107 50.000 0.00 0.00 39.76 3.91
1413 2475 0.820891 CAGAGGCAGTTGGTTGTGCT 60.821 55.000 0.00 0.00 39.76 4.40
1414 2476 1.656441 CAGAGGCAGTTGGTTGTGC 59.344 57.895 0.00 0.00 39.08 4.57
1706 2840 8.128582 GCATGATTGATTAATTAAGTTGACCGA 58.871 33.333 3.94 0.00 0.00 4.69
1707 2841 7.379529 GGCATGATTGATTAATTAAGTTGACCG 59.620 37.037 3.94 0.00 0.00 4.79
1708 2842 7.379529 CGGCATGATTGATTAATTAAGTTGACC 59.620 37.037 3.94 0.00 0.00 4.02
1709 2843 8.128582 TCGGCATGATTGATTAATTAAGTTGAC 58.871 33.333 3.94 0.00 0.00 3.18
1732 2870 2.866156 ACATCATGCGTCTACAATTCGG 59.134 45.455 0.00 0.00 0.00 4.30
1803 3595 7.504924 TCATTAAAACTGGAAGGTACAACTG 57.495 36.000 0.00 0.00 39.30 3.16
1805 3597 8.573035 TGATTCATTAAAACTGGAAGGTACAAC 58.427 33.333 0.00 0.00 39.30 3.32
1806 3598 8.698973 TGATTCATTAAAACTGGAAGGTACAA 57.301 30.769 0.00 0.00 39.30 2.41
1807 3599 8.877864 ATGATTCATTAAAACTGGAAGGTACA 57.122 30.769 0.00 0.00 39.30 2.90
1848 3661 8.035984 CCTTCGAAGAAAACTTTAGGAGTAGAT 58.964 37.037 26.61 0.00 45.90 1.98
1907 3722 4.335594 GTGTAAACCATCAATAGGAGCACC 59.664 45.833 0.00 0.00 0.00 5.01
1910 3725 3.560068 CGGTGTAAACCATCAATAGGAGC 59.440 47.826 2.20 0.00 0.00 4.70
1911 3726 4.127171 CCGGTGTAAACCATCAATAGGAG 58.873 47.826 2.20 0.00 0.00 3.69
1912 3727 3.775866 TCCGGTGTAAACCATCAATAGGA 59.224 43.478 0.00 0.00 0.00 2.94
1913 3728 4.145365 TCCGGTGTAAACCATCAATAGG 57.855 45.455 0.00 0.00 0.00 2.57
1914 3729 6.522054 ACTATCCGGTGTAAACCATCAATAG 58.478 40.000 0.00 5.83 30.92 1.73
1953 3776 1.405526 GCCAAGCTCGTCCATCTTGTA 60.406 52.381 0.00 0.00 36.41 2.41
2074 3897 6.590677 GTGAGGTTATCCGGCTTAATATTCTC 59.409 42.308 0.00 0.99 39.05 2.87
2103 3926 2.141517 CGGCTGATCATTAGAAGGCAG 58.858 52.381 0.00 0.00 35.07 4.85
2364 4200 9.193806 ACAAGCAGGATGAAATTGACTATTATT 57.806 29.630 0.00 0.00 39.69 1.40
2519 4357 3.081804 AGCCTAAATAACACTGCACCAC 58.918 45.455 0.00 0.00 0.00 4.16
2608 5372 3.735591 TGAAGGAAAAGAGGTTGTACGG 58.264 45.455 0.00 0.00 0.00 4.02
2709 5723 3.074538 ACCTTCCCTGATGCACTACTTTT 59.925 43.478 0.00 0.00 0.00 2.27
2744 5758 2.906691 TTTTGTTGCAATCAGGGGTG 57.093 45.000 0.59 0.00 0.00 4.61
2995 6026 2.163509 GAGTAGCCTCACTGTCACTGA 58.836 52.381 0.00 0.00 37.67 3.41
3138 6169 1.420430 AAGAAGGACGTCAGGTGGAA 58.580 50.000 18.91 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.