Multiple sequence alignment - TraesCS7A01G480900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G480900 chr7A 100.000 2399 0 0 1 2399 672949935 672952333 0.000000e+00 4431.0
1 TraesCS7A01G480900 chr7A 83.531 1603 193 38 473 2059 673013207 673014754 0.000000e+00 1432.0
2 TraesCS7A01G480900 chr7A 95.802 262 10 1 2138 2399 208662493 208662233 2.850000e-114 422.0
3 TraesCS7A01G480900 chr7A 95.437 263 11 1 2137 2399 540467516 540467255 3.690000e-113 418.0
4 TraesCS7A01G480900 chr7A 94.403 268 14 1 2132 2399 38088794 38088528 6.170000e-111 411.0
5 TraesCS7A01G480900 chr7A 74.153 1180 210 60 247 1378 673993696 673994828 3.710000e-108 401.0
6 TraesCS7A01G480900 chr7A 94.737 38 2 0 656 693 79810870 79810833 2.580000e-05 60.2
7 TraesCS7A01G480900 chr7D 87.040 1929 176 29 222 2138 581039804 581041670 0.000000e+00 2109.0
8 TraesCS7A01G480900 chr7D 84.631 1464 197 17 267 1713 581086475 581087927 0.000000e+00 1432.0
9 TraesCS7A01G480900 chr7D 78.265 1187 206 32 251 1399 581271608 581272780 0.000000e+00 715.0
10 TraesCS7A01G480900 chr7D 76.381 1177 218 37 273 1402 581284170 581285333 1.600000e-161 579.0
11 TraesCS7A01G480900 chr7D 85.961 406 38 7 1740 2138 581088517 581088910 1.330000e-112 416.0
12 TraesCS7A01G480900 chr7D 73.028 1179 237 53 238 1381 580756835 580757967 8.210000e-90 340.0
13 TraesCS7A01G480900 chr7D 88.532 218 19 4 238 455 580741877 580742088 2.370000e-65 259.0
14 TraesCS7A01G480900 chr7B 76.884 1168 220 31 273 1404 648909365 648910518 1.220000e-172 616.0
15 TraesCS7A01G480900 chr7B 83.508 382 48 9 251 620 648904754 648905132 2.280000e-90 342.0
16 TraesCS7A01G480900 chr7B 71.936 1183 268 40 227 1381 648378550 648379696 1.090000e-73 287.0
17 TraesCS7A01G480900 chr7B 94.595 37 2 0 657 693 21935785 21935749 9.260000e-05 58.4
18 TraesCS7A01G480900 chr5D 75.620 1169 209 41 296 1404 289687149 289688301 5.920000e-141 510.0
19 TraesCS7A01G480900 chr4A 94.776 268 12 2 2133 2399 161837007 161836741 1.330000e-112 416.0
20 TraesCS7A01G480900 chr4A 95.057 263 12 1 2137 2399 61881205 61880944 1.720000e-111 412.0
21 TraesCS7A01G480900 chr2B 96.094 256 9 1 2140 2395 322333570 322333824 1.330000e-112 416.0
22 TraesCS7A01G480900 chr3B 95.402 261 10 2 2137 2396 534863825 534864084 4.770000e-112 414.0
23 TraesCS7A01G480900 chr2A 96.078 255 9 1 2142 2396 126719772 126720025 4.770000e-112 414.0
24 TraesCS7A01G480900 chr2A 93.171 205 13 1 19 223 697358995 697358792 1.390000e-77 300.0
25 TraesCS7A01G480900 chr3A 94.382 267 13 2 2133 2399 63888952 63888688 2.220000e-110 409.0
26 TraesCS7A01G480900 chr3A 94.416 197 11 0 25 221 634755109 634754913 1.080000e-78 303.0
27 TraesCS7A01G480900 chr3A 94.416 197 11 0 25 221 717627185 717626989 1.080000e-78 303.0
28 TraesCS7A01G480900 chr3A 91.866 209 17 0 18 226 650688758 650688966 2.330000e-75 292.0
29 TraesCS7A01G480900 chr1A 93.659 205 12 1 19 223 388607982 388607779 3.000000e-79 305.0
30 TraesCS7A01G480900 chr6A 93.939 198 12 0 24 221 422895209 422895012 1.390000e-77 300.0
31 TraesCS7A01G480900 chr3D 93.970 199 11 1 24 221 547081795 547081597 1.390000e-77 300.0
32 TraesCS7A01G480900 chr1D 94.388 196 10 1 27 221 269118742 269118937 1.390000e-77 300.0
33 TraesCS7A01G480900 chr5A 91.827 208 17 0 21 228 94105083 94105290 8.390000e-75 291.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G480900 chr7A 672949935 672952333 2398 False 4431 4431 100.000 1 2399 1 chr7A.!!$F1 2398
1 TraesCS7A01G480900 chr7A 673013207 673014754 1547 False 1432 1432 83.531 473 2059 1 chr7A.!!$F2 1586
2 TraesCS7A01G480900 chr7A 673993696 673994828 1132 False 401 401 74.153 247 1378 1 chr7A.!!$F3 1131
3 TraesCS7A01G480900 chr7D 581039804 581041670 1866 False 2109 2109 87.040 222 2138 1 chr7D.!!$F3 1916
4 TraesCS7A01G480900 chr7D 581086475 581088910 2435 False 924 1432 85.296 267 2138 2 chr7D.!!$F6 1871
5 TraesCS7A01G480900 chr7D 581271608 581272780 1172 False 715 715 78.265 251 1399 1 chr7D.!!$F4 1148
6 TraesCS7A01G480900 chr7D 581284170 581285333 1163 False 579 579 76.381 273 1402 1 chr7D.!!$F5 1129
7 TraesCS7A01G480900 chr7D 580756835 580757967 1132 False 340 340 73.028 238 1381 1 chr7D.!!$F2 1143
8 TraesCS7A01G480900 chr7B 648909365 648910518 1153 False 616 616 76.884 273 1404 1 chr7B.!!$F3 1131
9 TraesCS7A01G480900 chr7B 648378550 648379696 1146 False 287 287 71.936 227 1381 1 chr7B.!!$F1 1154
10 TraesCS7A01G480900 chr5D 289687149 289688301 1152 False 510 510 75.620 296 1404 1 chr5D.!!$F1 1108

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
470 493 0.320771 CTTCCACGGTAGCAGCAACT 60.321 55.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2242 2977 0.958091 CCACGGAATGGCAAAAGTGA 59.042 50.0 14.36 0.0 43.24 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.995199 TCGAACATAGCATCCATTCCTC 58.005 45.455 0.00 0.00 0.00 3.71
22 23 3.070018 CGAACATAGCATCCATTCCTCC 58.930 50.000 0.00 0.00 0.00 4.30
23 24 2.847327 ACATAGCATCCATTCCTCCG 57.153 50.000 0.00 0.00 0.00 4.63
24 25 2.329267 ACATAGCATCCATTCCTCCGA 58.671 47.619 0.00 0.00 0.00 4.55
25 26 2.909006 ACATAGCATCCATTCCTCCGAT 59.091 45.455 0.00 0.00 0.00 4.18
26 27 3.055530 ACATAGCATCCATTCCTCCGATC 60.056 47.826 0.00 0.00 0.00 3.69
27 28 1.427809 AGCATCCATTCCTCCGATCA 58.572 50.000 0.00 0.00 0.00 2.92
28 29 1.770658 AGCATCCATTCCTCCGATCAA 59.229 47.619 0.00 0.00 0.00 2.57
29 30 2.374504 AGCATCCATTCCTCCGATCAAT 59.625 45.455 0.00 0.00 0.00 2.57
30 31 2.486982 GCATCCATTCCTCCGATCAATG 59.513 50.000 0.00 0.00 0.00 2.82
31 32 3.748083 CATCCATTCCTCCGATCAATGT 58.252 45.455 0.00 0.00 0.00 2.71
32 33 3.931907 TCCATTCCTCCGATCAATGTT 57.068 42.857 0.00 0.00 0.00 2.71
33 34 3.544684 TCCATTCCTCCGATCAATGTTG 58.455 45.455 0.00 0.00 0.00 3.33
34 35 2.620115 CCATTCCTCCGATCAATGTTGG 59.380 50.000 0.00 0.00 0.00 3.77
35 36 2.418368 TTCCTCCGATCAATGTTGGG 57.582 50.000 0.00 0.00 0.00 4.12
36 37 0.546122 TCCTCCGATCAATGTTGGGG 59.454 55.000 0.00 0.00 0.00 4.96
37 38 0.546122 CCTCCGATCAATGTTGGGGA 59.454 55.000 0.00 0.00 0.00 4.81
38 39 1.143684 CCTCCGATCAATGTTGGGGAT 59.856 52.381 0.00 0.00 0.00 3.85
39 40 2.371841 CCTCCGATCAATGTTGGGGATA 59.628 50.000 0.00 0.00 0.00 2.59
40 41 3.009473 CCTCCGATCAATGTTGGGGATAT 59.991 47.826 0.00 0.00 0.00 1.63
41 42 4.256920 CTCCGATCAATGTTGGGGATATC 58.743 47.826 0.00 0.00 0.00 1.63
42 43 3.002791 CCGATCAATGTTGGGGATATCG 58.997 50.000 0.00 0.00 35.68 2.92
43 44 2.416547 CGATCAATGTTGGGGATATCGC 59.583 50.000 11.21 11.21 0.00 4.58
44 45 3.679389 GATCAATGTTGGGGATATCGCT 58.321 45.455 18.21 0.00 0.00 4.93
45 46 3.576078 TCAATGTTGGGGATATCGCTT 57.424 42.857 18.21 2.96 0.00 4.68
46 47 4.698201 TCAATGTTGGGGATATCGCTTA 57.302 40.909 18.21 6.48 0.00 3.09
47 48 5.241403 TCAATGTTGGGGATATCGCTTAT 57.759 39.130 18.21 6.34 0.00 1.73
48 49 5.245531 TCAATGTTGGGGATATCGCTTATC 58.754 41.667 18.21 8.56 36.70 1.75
49 50 4.908601 ATGTTGGGGATATCGCTTATCA 57.091 40.909 18.21 12.87 38.82 2.15
50 51 4.271696 TGTTGGGGATATCGCTTATCAG 57.728 45.455 18.21 0.00 38.82 2.90
51 52 3.007940 TGTTGGGGATATCGCTTATCAGG 59.992 47.826 18.21 0.00 38.82 3.86
52 53 3.184382 TGGGGATATCGCTTATCAGGA 57.816 47.619 18.21 0.00 38.82 3.86
53 54 3.516586 TGGGGATATCGCTTATCAGGAA 58.483 45.455 18.21 0.00 38.82 3.36
54 55 3.260884 TGGGGATATCGCTTATCAGGAAC 59.739 47.826 18.21 0.00 38.82 3.62
55 56 3.515901 GGGGATATCGCTTATCAGGAACT 59.484 47.826 18.21 0.00 38.82 3.01
56 57 4.020128 GGGGATATCGCTTATCAGGAACTT 60.020 45.833 18.21 0.00 38.82 2.66
57 58 5.187186 GGGGATATCGCTTATCAGGAACTTA 59.813 44.000 18.21 0.00 38.82 2.24
58 59 6.127026 GGGGATATCGCTTATCAGGAACTTAT 60.127 42.308 18.21 0.00 38.82 1.73
59 60 6.981559 GGGATATCGCTTATCAGGAACTTATC 59.018 42.308 12.31 0.00 38.82 1.75
60 61 6.693545 GGATATCGCTTATCAGGAACTTATCG 59.306 42.308 0.00 0.00 38.82 2.92
61 62 4.238761 TCGCTTATCAGGAACTTATCGG 57.761 45.455 0.00 0.00 34.60 4.18
62 63 3.635373 TCGCTTATCAGGAACTTATCGGT 59.365 43.478 0.00 0.00 34.60 4.69
63 64 3.982058 CGCTTATCAGGAACTTATCGGTC 59.018 47.826 0.00 0.00 34.60 4.79
64 65 3.982058 GCTTATCAGGAACTTATCGGTCG 59.018 47.826 0.00 0.00 34.60 4.79
65 66 4.261489 GCTTATCAGGAACTTATCGGTCGA 60.261 45.833 0.00 0.00 34.60 4.20
66 67 3.712091 ATCAGGAACTTATCGGTCGAC 57.288 47.619 7.13 7.13 34.60 4.20
67 68 1.747355 TCAGGAACTTATCGGTCGACC 59.253 52.381 25.28 25.28 34.60 4.79
68 69 1.109609 AGGAACTTATCGGTCGACCC 58.890 55.000 28.52 11.63 27.25 4.46
69 70 0.819582 GGAACTTATCGGTCGACCCA 59.180 55.000 28.52 17.72 0.00 4.51
70 71 1.205417 GGAACTTATCGGTCGACCCAA 59.795 52.381 28.52 17.41 0.00 4.12
71 72 2.537401 GAACTTATCGGTCGACCCAAG 58.463 52.381 28.52 26.67 0.00 3.61
72 73 1.843368 ACTTATCGGTCGACCCAAGA 58.157 50.000 30.35 22.88 0.00 3.02
73 74 2.385803 ACTTATCGGTCGACCCAAGAT 58.614 47.619 30.35 26.46 0.00 2.40
74 75 3.559069 ACTTATCGGTCGACCCAAGATA 58.441 45.455 30.35 25.66 0.00 1.98
75 76 3.956199 ACTTATCGGTCGACCCAAGATAA 59.044 43.478 30.35 28.88 34.08 1.75
76 77 4.547532 CTTATCGGTCGACCCAAGATAAG 58.452 47.826 32.99 32.99 42.03 1.73
77 78 1.108776 TCGGTCGACCCAAGATAAGG 58.891 55.000 28.52 11.29 0.00 2.69
87 88 3.751518 CCCAAGATAAGGGGTAAATCGG 58.248 50.000 0.00 0.00 42.90 4.18
88 89 3.146847 CCAAGATAAGGGGTAAATCGGC 58.853 50.000 0.00 0.00 0.00 5.54
89 90 3.181443 CCAAGATAAGGGGTAAATCGGCT 60.181 47.826 0.00 0.00 0.00 5.52
90 91 4.041198 CCAAGATAAGGGGTAAATCGGCTA 59.959 45.833 0.00 0.00 0.00 3.93
91 92 5.238583 CAAGATAAGGGGTAAATCGGCTAG 58.761 45.833 0.00 0.00 0.00 3.42
92 93 4.490706 AGATAAGGGGTAAATCGGCTAGT 58.509 43.478 0.00 0.00 0.00 2.57
93 94 4.906060 AGATAAGGGGTAAATCGGCTAGTT 59.094 41.667 0.00 0.00 0.00 2.24
94 95 5.368816 AGATAAGGGGTAAATCGGCTAGTTT 59.631 40.000 0.00 0.00 0.00 2.66
95 96 6.556116 AGATAAGGGGTAAATCGGCTAGTTTA 59.444 38.462 0.00 0.00 0.00 2.01
96 97 5.641789 AAGGGGTAAATCGGCTAGTTTAT 57.358 39.130 0.00 0.00 0.00 1.40
97 98 5.224821 AGGGGTAAATCGGCTAGTTTATC 57.775 43.478 0.00 0.00 0.00 1.75
98 99 3.992427 GGGGTAAATCGGCTAGTTTATCG 59.008 47.826 0.00 0.00 0.00 2.92
99 100 3.992427 GGGTAAATCGGCTAGTTTATCGG 59.008 47.826 0.00 0.00 0.00 4.18
100 101 3.431233 GGTAAATCGGCTAGTTTATCGGC 59.569 47.826 0.00 0.00 0.00 5.54
101 102 2.902705 AATCGGCTAGTTTATCGGCA 57.097 45.000 0.00 0.00 0.00 5.69
102 103 3.402628 AATCGGCTAGTTTATCGGCAT 57.597 42.857 0.00 0.00 0.00 4.40
103 104 4.530710 AATCGGCTAGTTTATCGGCATA 57.469 40.909 0.00 0.00 0.00 3.14
104 105 4.737855 ATCGGCTAGTTTATCGGCATAT 57.262 40.909 0.00 0.00 0.00 1.78
105 106 4.530710 TCGGCTAGTTTATCGGCATATT 57.469 40.909 0.00 0.00 0.00 1.28
106 107 4.242475 TCGGCTAGTTTATCGGCATATTG 58.758 43.478 0.00 0.00 0.00 1.90
107 108 3.370978 CGGCTAGTTTATCGGCATATTGG 59.629 47.826 0.00 0.00 0.00 3.16
108 109 3.127030 GGCTAGTTTATCGGCATATTGGC 59.873 47.826 0.00 0.00 39.85 4.52
109 110 4.003648 GCTAGTTTATCGGCATATTGGCT 58.996 43.478 0.00 0.00 41.25 4.75
110 111 4.142816 GCTAGTTTATCGGCATATTGGCTG 60.143 45.833 0.00 0.00 41.25 4.85
118 119 3.684305 TCGGCATATTGGCTGATTTATCG 59.316 43.478 0.00 0.00 43.94 2.92
119 120 3.728864 CGGCATATTGGCTGATTTATCGC 60.729 47.826 0.00 0.00 42.91 4.58
120 121 3.428045 GGCATATTGGCTGATTTATCGCC 60.428 47.826 14.50 14.50 42.60 5.54
121 122 3.191162 GCATATTGGCTGATTTATCGCCA 59.809 43.478 17.96 17.96 46.59 5.69
126 127 3.261580 TGGCTGATTTATCGCCATATCG 58.738 45.455 17.96 0.00 44.91 2.92
127 128 3.056179 TGGCTGATTTATCGCCATATCGA 60.056 43.478 17.96 0.00 44.91 3.59
128 129 3.307242 GGCTGATTTATCGCCATATCGAC 59.693 47.826 15.72 0.00 42.19 4.20
129 130 4.177026 GCTGATTTATCGCCATATCGACT 58.823 43.478 0.00 0.00 41.62 4.18
130 131 5.340803 GCTGATTTATCGCCATATCGACTA 58.659 41.667 0.00 0.00 41.62 2.59
131 132 5.805486 GCTGATTTATCGCCATATCGACTAA 59.195 40.000 0.00 0.00 41.62 2.24
132 133 6.477033 GCTGATTTATCGCCATATCGACTAAT 59.523 38.462 0.00 0.00 41.62 1.73
133 134 7.010552 GCTGATTTATCGCCATATCGACTAATT 59.989 37.037 0.00 0.00 41.62 1.40
134 135 8.771920 TGATTTATCGCCATATCGACTAATTT 57.228 30.769 0.00 0.00 41.62 1.82
135 136 9.863845 TGATTTATCGCCATATCGACTAATTTA 57.136 29.630 0.00 0.00 41.62 1.40
138 139 8.556517 TTATCGCCATATCGACTAATTTATCG 57.443 34.615 5.01 5.01 41.62 2.92
139 140 5.337554 TCGCCATATCGACTAATTTATCGG 58.662 41.667 10.17 0.00 38.86 4.18
140 141 4.026804 CGCCATATCGACTAATTTATCGGC 60.027 45.833 10.17 0.00 38.86 5.54
141 142 4.270325 GCCATATCGACTAATTTATCGGCC 59.730 45.833 10.17 0.00 38.86 6.13
142 143 4.503007 CCATATCGACTAATTTATCGGCCG 59.497 45.833 22.12 22.12 38.86 6.13
143 144 3.928727 ATCGACTAATTTATCGGCCGA 57.071 42.857 33.12 33.12 38.86 5.54
144 145 3.928727 TCGACTAATTTATCGGCCGAT 57.071 42.857 39.97 39.97 38.86 4.18
145 146 4.247267 TCGACTAATTTATCGGCCGATT 57.753 40.909 42.74 28.62 38.86 3.34
146 147 4.624015 TCGACTAATTTATCGGCCGATTT 58.376 39.130 42.74 31.89 38.86 2.17
147 148 5.771469 TCGACTAATTTATCGGCCGATTTA 58.229 37.500 42.74 31.34 38.86 1.40
148 149 6.392354 TCGACTAATTTATCGGCCGATTTAT 58.608 36.000 42.74 30.95 38.86 1.40
149 150 6.529125 TCGACTAATTTATCGGCCGATTTATC 59.471 38.462 42.74 27.05 38.86 1.75
150 151 6.530534 CGACTAATTTATCGGCCGATTTATCT 59.469 38.462 42.74 25.40 36.17 1.98
151 152 7.063074 CGACTAATTTATCGGCCGATTTATCTT 59.937 37.037 42.74 28.16 36.17 2.40
152 153 9.362539 GACTAATTTATCGGCCGATTTATCTTA 57.637 33.333 42.74 27.84 36.17 2.10
153 154 9.886132 ACTAATTTATCGGCCGATTTATCTTAT 57.114 29.630 42.74 21.01 36.17 1.73
155 156 6.880822 TTTATCGGCCGATTTATCTTATCG 57.119 37.500 42.74 4.23 43.32 2.92
156 157 4.713824 ATCGGCCGATTTATCTTATCGA 57.286 40.909 34.60 5.19 45.79 3.59
157 158 4.713824 TCGGCCGATTTATCTTATCGAT 57.286 40.909 27.28 2.16 45.79 3.59
158 159 4.669318 TCGGCCGATTTATCTTATCGATC 58.331 43.478 27.28 0.00 45.79 3.69
159 160 4.157105 TCGGCCGATTTATCTTATCGATCA 59.843 41.667 27.28 0.00 45.79 2.92
160 161 4.500837 CGGCCGATTTATCTTATCGATCAG 59.499 45.833 24.07 0.00 45.79 2.90
161 162 5.651530 GGCCGATTTATCTTATCGATCAGA 58.348 41.667 11.54 11.54 45.79 3.27
162 163 5.517054 GGCCGATTTATCTTATCGATCAGAC 59.483 44.000 11.39 0.00 45.79 3.51
163 164 6.093404 GCCGATTTATCTTATCGATCAGACA 58.907 40.000 11.39 0.00 45.79 3.41
164 165 6.252441 GCCGATTTATCTTATCGATCAGACAG 59.748 42.308 11.39 0.00 45.79 3.51
165 166 6.252441 CCGATTTATCTTATCGATCAGACAGC 59.748 42.308 11.39 1.79 45.79 4.40
166 167 6.021861 CGATTTATCTTATCGATCAGACAGCG 60.022 42.308 11.39 9.33 45.79 5.18
167 168 3.567576 ATCTTATCGATCAGACAGCGG 57.432 47.619 11.39 0.00 0.00 5.52
168 169 2.298610 TCTTATCGATCAGACAGCGGT 58.701 47.619 0.00 0.00 0.00 5.68
169 170 3.473625 TCTTATCGATCAGACAGCGGTA 58.526 45.455 0.00 0.00 0.00 4.02
170 171 3.881089 TCTTATCGATCAGACAGCGGTAA 59.119 43.478 0.00 0.00 0.00 2.85
171 172 2.783828 ATCGATCAGACAGCGGTAAG 57.216 50.000 0.00 0.00 0.00 2.34
172 173 5.369250 CTTATCGATCAGACAGCGGTAAGC 61.369 50.000 0.00 0.00 40.43 3.09
236 237 3.147595 TGCCTCCGATCCCGTGAG 61.148 66.667 0.00 0.00 34.83 3.51
340 341 0.919710 TCCTCGTGGAGATCCTCTCA 59.080 55.000 1.10 0.00 45.12 3.27
470 493 0.320771 CTTCCACGGTAGCAGCAACT 60.321 55.000 0.00 0.00 0.00 3.16
482 517 1.813513 CAGCAACTTCGAGGATTGGT 58.186 50.000 0.00 5.24 34.52 3.67
512 547 0.764369 ACCTGTCCTCTTCACCAGCA 60.764 55.000 0.00 0.00 0.00 4.41
520 555 1.069823 CTCTTCACCAGCATATCGCCT 59.930 52.381 0.00 0.00 44.04 5.52
538 579 1.151699 TTCCCCTCCCATGGACACA 60.152 57.895 15.22 0.00 0.00 3.72
570 612 2.126596 TGCCCAACACCAGCAGTTG 61.127 57.895 0.00 0.00 44.47 3.16
626 668 0.866061 CGCTTGTATGACGTCTCGGG 60.866 60.000 17.92 3.57 0.00 5.14
640 682 3.365265 CGGGTGAGGTTGGCAAGC 61.365 66.667 21.16 21.16 0.00 4.01
722 773 1.301244 AGGACAGCGTCAACTGCAG 60.301 57.895 13.48 13.48 41.60 4.41
789 840 1.067295 TTGAGTTGGTGGAGGAGCAT 58.933 50.000 0.00 0.00 0.00 3.79
802 877 5.591877 GTGGAGGAGCATGATAACTTCATTT 59.408 40.000 0.00 0.00 42.62 2.32
803 878 5.824624 TGGAGGAGCATGATAACTTCATTTC 59.175 40.000 0.00 0.00 42.62 2.17
804 879 5.240403 GGAGGAGCATGATAACTTCATTTCC 59.760 44.000 0.00 7.39 42.62 3.13
805 880 4.818546 AGGAGCATGATAACTTCATTTCCG 59.181 41.667 0.00 0.00 42.62 4.30
806 881 4.023707 GGAGCATGATAACTTCATTTCCGG 60.024 45.833 0.00 0.00 42.62 5.14
807 882 4.780815 AGCATGATAACTTCATTTCCGGA 58.219 39.130 0.00 0.00 42.62 5.14
808 883 4.818546 AGCATGATAACTTCATTTCCGGAG 59.181 41.667 3.34 0.00 42.62 4.63
809 884 4.576463 GCATGATAACTTCATTTCCGGAGT 59.424 41.667 3.34 0.00 42.62 3.85
810 885 5.504665 GCATGATAACTTCATTTCCGGAGTG 60.505 44.000 3.34 8.49 42.62 3.51
813 888 0.693049 ACTTCATTTCCGGAGTGGCT 59.307 50.000 16.18 0.49 37.80 4.75
890 965 7.165483 CAGATGGAACGAACGTATCTTACTTAC 59.835 40.741 7.93 0.00 0.00 2.34
1035 1145 0.953960 CTGGTGGTCTGGTTAACGGC 60.954 60.000 0.00 0.00 0.00 5.68
1070 1180 1.076777 AGGGCCGCTTGCATTATGT 60.077 52.632 0.00 0.00 43.89 2.29
1082 1192 6.474427 CGCTTGCATTATGTCAATTTTCAGAT 59.526 34.615 0.00 0.00 0.00 2.90
1083 1193 7.514591 CGCTTGCATTATGTCAATTTTCAGATG 60.515 37.037 0.00 0.00 0.00 2.90
1103 1219 2.374839 TGGATGAAGATGGTGGTGTCAA 59.625 45.455 0.00 0.00 0.00 3.18
1106 1222 3.786368 TGAAGATGGTGGTGTCAATCA 57.214 42.857 0.00 0.00 0.00 2.57
1190 1308 8.450964 CGTTGAAACTTCATACATACTTGGAAT 58.549 33.333 0.00 0.00 37.00 3.01
1192 1310 8.279970 TGAAACTTCATACATACTTGGAATGG 57.720 34.615 0.00 0.00 31.01 3.16
1227 1363 6.458615 GCATTTATTGGTTTGATTGGATTGCC 60.459 38.462 0.00 0.00 0.00 4.52
1265 1401 5.183904 GCAACTTGATATTCTTCACCCTTGT 59.816 40.000 0.00 0.00 0.00 3.16
1300 1436 9.797642 TCAAACTCATGTGCTATAATATGGATT 57.202 29.630 0.00 0.00 0.00 3.01
1317 1453 3.071479 GGATTGTCGGCAAGTCAAAGTA 58.929 45.455 9.01 0.00 38.10 2.24
1329 1465 5.798934 GCAAGTCAAAGTAATCTGCAATCTG 59.201 40.000 0.00 0.00 0.00 2.90
1374 1510 2.221169 CCATATGTGCCGTTGTATGCT 58.779 47.619 1.24 0.00 0.00 3.79
1390 1526 3.641434 ATGCTGAGTTAGAGGCATTGT 57.359 42.857 0.00 0.00 41.80 2.71
1440 1579 3.641437 TGGTTGCTTTATGTTGTCTGC 57.359 42.857 0.00 0.00 0.00 4.26
1459 1598 6.866770 TGTCTGCACTTGTTTCTGTATACTAC 59.133 38.462 4.17 0.00 0.00 2.73
1526 1665 5.114780 TGCAAAATGTTTCAGCAAAGCTAA 58.885 33.333 0.00 0.00 36.40 3.09
1529 1672 7.440556 TGCAAAATGTTTCAGCAAAGCTAATAA 59.559 29.630 0.00 0.00 36.40 1.40
1555 1698 7.930865 AGATCATTTAGTGAAGGACTTATCAGC 59.069 37.037 0.00 0.00 40.97 4.26
1556 1699 6.349300 TCATTTAGTGAAGGACTTATCAGCC 58.651 40.000 0.00 0.00 35.96 4.85
1692 1835 9.224267 CGATAATTTGTGGGATCATATCTTTCT 57.776 33.333 0.00 0.00 0.00 2.52
1695 1838 8.599624 AATTTGTGGGATCATATCTTTCTTGT 57.400 30.769 0.00 0.00 0.00 3.16
1719 1862 7.558081 TGTTAAATGCTAATTACATGTGGCCTA 59.442 33.333 9.11 0.00 0.00 3.93
1751 2457 5.124138 TCGAAAAAGGTGTTAGCAGAACAAA 59.876 36.000 5.84 0.00 31.20 2.83
1813 2539 2.160417 CAGAAATCCTGCTTGTTCGTCC 59.840 50.000 0.00 0.00 35.89 4.79
1858 2585 5.008712 GGGTTAAAATAGTCTATGCACTGCC 59.991 44.000 0.00 0.00 0.00 4.85
1863 2590 1.279496 AGTCTATGCACTGCCCTTCA 58.721 50.000 0.00 0.00 0.00 3.02
1864 2591 1.630369 AGTCTATGCACTGCCCTTCAA 59.370 47.619 0.00 0.00 0.00 2.69
1875 2602 1.340991 TGCCCTTCAAATGCTACTCCC 60.341 52.381 0.00 0.00 0.00 4.30
1877 2604 1.017387 CCTTCAAATGCTACTCCCGC 58.983 55.000 0.00 0.00 0.00 6.13
1878 2605 1.678728 CCTTCAAATGCTACTCCCGCA 60.679 52.381 0.00 0.00 42.25 5.69
1879 2606 1.667724 CTTCAAATGCTACTCCCGCAG 59.332 52.381 0.00 0.00 41.22 5.18
1880 2607 0.613260 TCAAATGCTACTCCCGCAGT 59.387 50.000 0.00 0.00 41.22 4.40
1881 2608 1.009829 CAAATGCTACTCCCGCAGTC 58.990 55.000 0.00 0.00 41.22 3.51
1882 2609 0.107654 AAATGCTACTCCCGCAGTCC 60.108 55.000 0.00 0.00 41.22 3.85
1883 2610 0.978146 AATGCTACTCCCGCAGTCCT 60.978 55.000 0.00 0.00 41.22 3.85
1884 2611 0.106167 ATGCTACTCCCGCAGTCCTA 60.106 55.000 0.00 0.00 41.22 2.94
1953 2688 2.721090 GTGCAGCGTTGTTTCTGAATTC 59.279 45.455 0.00 0.00 32.26 2.17
1987 2722 1.298993 CTGTGGCTGTCATGGCTCT 59.701 57.895 0.00 0.00 0.00 4.09
1993 2728 1.251251 GCTGTCATGGCTCTGGTTTT 58.749 50.000 0.00 0.00 0.00 2.43
2002 2737 2.106511 TGGCTCTGGTTTTAGCTTCAGT 59.893 45.455 0.00 0.00 38.80 3.41
2011 2746 4.577283 GGTTTTAGCTTCAGTTACCACACA 59.423 41.667 0.00 0.00 0.00 3.72
2017 2752 5.433526 AGCTTCAGTTACCACACAGTTTAA 58.566 37.500 0.00 0.00 0.00 1.52
2078 2813 0.178961 GGTGCCCCTTTTCCTCAGTT 60.179 55.000 0.00 0.00 0.00 3.16
2097 2832 7.147479 CCTCAGTTTCCTCCCTATTTCTTGATA 60.147 40.741 0.00 0.00 0.00 2.15
2101 2836 8.781951 AGTTTCCTCCCTATTTCTTGATATTGA 58.218 33.333 0.00 0.00 0.00 2.57
2102 2837 9.408648 GTTTCCTCCCTATTTCTTGATATTGAA 57.591 33.333 0.00 0.00 0.00 2.69
2118 2853 8.969260 TGATATTGAACAATGCACTCTAGATT 57.031 30.769 9.87 0.00 32.50 2.40
2141 2876 9.774742 GATTTTAGCTGAACTGTTAACTTATGG 57.225 33.333 7.22 0.00 0.00 2.74
2142 2877 7.681939 TTTAGCTGAACTGTTAACTTATGGG 57.318 36.000 7.22 0.00 0.00 4.00
2143 2878 5.499004 AGCTGAACTGTTAACTTATGGGA 57.501 39.130 7.22 0.00 0.00 4.37
2144 2879 5.876357 AGCTGAACTGTTAACTTATGGGAA 58.124 37.500 7.22 0.00 0.00 3.97
2145 2880 6.303839 AGCTGAACTGTTAACTTATGGGAAA 58.696 36.000 7.22 0.00 0.00 3.13
2146 2881 6.775629 AGCTGAACTGTTAACTTATGGGAAAA 59.224 34.615 7.22 0.00 0.00 2.29
2147 2882 6.861572 GCTGAACTGTTAACTTATGGGAAAAC 59.138 38.462 7.22 0.00 0.00 2.43
2148 2883 7.255486 GCTGAACTGTTAACTTATGGGAAAACT 60.255 37.037 7.22 0.00 0.00 2.66
2149 2884 8.528044 TGAACTGTTAACTTATGGGAAAACTT 57.472 30.769 7.22 0.00 0.00 2.66
2150 2885 8.973182 TGAACTGTTAACTTATGGGAAAACTTT 58.027 29.630 7.22 0.00 0.00 2.66
2151 2886 9.244799 GAACTGTTAACTTATGGGAAAACTTTG 57.755 33.333 7.22 0.00 0.00 2.77
2152 2887 8.301252 ACTGTTAACTTATGGGAAAACTTTGT 57.699 30.769 7.22 0.00 0.00 2.83
2153 2888 8.755028 ACTGTTAACTTATGGGAAAACTTTGTT 58.245 29.630 7.22 0.00 0.00 2.83
2154 2889 9.594478 CTGTTAACTTATGGGAAAACTTTGTTT 57.406 29.630 7.22 0.00 0.00 2.83
2155 2890 9.945904 TGTTAACTTATGGGAAAACTTTGTTTT 57.054 25.926 7.22 7.97 0.00 2.43
2158 2893 7.315247 ACTTATGGGAAAACTTTGTTTTTGC 57.685 32.000 9.36 0.00 36.39 3.68
2163 2898 5.216566 GGAAAACTTTGTTTTTGCCACTC 57.783 39.130 9.36 0.00 32.30 3.51
2164 2899 4.935205 GGAAAACTTTGTTTTTGCCACTCT 59.065 37.500 9.36 0.00 32.30 3.24
2165 2900 6.103330 GGAAAACTTTGTTTTTGCCACTCTA 58.897 36.000 9.36 0.00 32.30 2.43
2166 2901 6.255670 GGAAAACTTTGTTTTTGCCACTCTAG 59.744 38.462 9.36 0.00 32.30 2.43
2167 2902 5.914898 AACTTTGTTTTTGCCACTCTAGT 57.085 34.783 0.00 0.00 0.00 2.57
2168 2903 5.914898 ACTTTGTTTTTGCCACTCTAGTT 57.085 34.783 0.00 0.00 0.00 2.24
2169 2904 6.280855 ACTTTGTTTTTGCCACTCTAGTTT 57.719 33.333 0.00 0.00 0.00 2.66
2170 2905 6.697395 ACTTTGTTTTTGCCACTCTAGTTTT 58.303 32.000 0.00 0.00 0.00 2.43
2171 2906 7.158697 ACTTTGTTTTTGCCACTCTAGTTTTT 58.841 30.769 0.00 0.00 0.00 1.94
2189 2924 4.809815 TTTTTGCCAACTTTGCTTATGC 57.190 36.364 0.00 0.00 40.20 3.14
2190 2925 2.453983 TTGCCAACTTTGCTTATGCC 57.546 45.000 0.00 0.00 38.71 4.40
2191 2926 1.336131 TGCCAACTTTGCTTATGCCA 58.664 45.000 0.00 0.00 38.71 4.92
2192 2927 1.000731 TGCCAACTTTGCTTATGCCAC 59.999 47.619 0.00 0.00 38.71 5.01
2193 2928 1.273327 GCCAACTTTGCTTATGCCACT 59.727 47.619 0.00 0.00 38.71 4.00
2194 2929 2.289010 GCCAACTTTGCTTATGCCACTT 60.289 45.455 0.00 0.00 38.71 3.16
2195 2930 3.803368 GCCAACTTTGCTTATGCCACTTT 60.803 43.478 0.00 0.00 38.71 2.66
2196 2931 4.560513 GCCAACTTTGCTTATGCCACTTTA 60.561 41.667 0.00 0.00 38.71 1.85
2197 2932 5.163513 CCAACTTTGCTTATGCCACTTTAG 58.836 41.667 0.00 0.00 38.71 1.85
2198 2933 5.048083 CCAACTTTGCTTATGCCACTTTAGA 60.048 40.000 0.00 0.00 38.71 2.10
2199 2934 6.446318 CAACTTTGCTTATGCCACTTTAGAA 58.554 36.000 0.00 0.00 38.71 2.10
2200 2935 6.840780 ACTTTGCTTATGCCACTTTAGAAT 57.159 33.333 0.00 0.00 38.71 2.40
2201 2936 7.232118 ACTTTGCTTATGCCACTTTAGAATT 57.768 32.000 0.00 0.00 38.71 2.17
2202 2937 7.670364 ACTTTGCTTATGCCACTTTAGAATTT 58.330 30.769 0.00 0.00 38.71 1.82
2203 2938 7.599998 ACTTTGCTTATGCCACTTTAGAATTTG 59.400 33.333 0.00 0.00 38.71 2.32
2204 2939 6.832520 TGCTTATGCCACTTTAGAATTTGA 57.167 33.333 0.00 0.00 38.71 2.69
2205 2940 6.620678 TGCTTATGCCACTTTAGAATTTGAC 58.379 36.000 0.00 0.00 38.71 3.18
2206 2941 6.208402 TGCTTATGCCACTTTAGAATTTGACA 59.792 34.615 0.00 0.00 38.71 3.58
2207 2942 7.093814 TGCTTATGCCACTTTAGAATTTGACAT 60.094 33.333 0.00 0.00 38.71 3.06
2208 2943 7.761249 GCTTATGCCACTTTAGAATTTGACATT 59.239 33.333 0.00 0.00 0.00 2.71
2209 2944 9.643693 CTTATGCCACTTTAGAATTTGACATTT 57.356 29.630 0.00 0.00 0.00 2.32
2210 2945 9.638239 TTATGCCACTTTAGAATTTGACATTTC 57.362 29.630 0.00 0.00 0.00 2.17
2211 2946 7.048629 TGCCACTTTAGAATTTGACATTTCA 57.951 32.000 2.57 0.00 0.00 2.69
2212 2947 6.922957 TGCCACTTTAGAATTTGACATTTCAC 59.077 34.615 2.57 0.00 0.00 3.18
2213 2948 7.147976 GCCACTTTAGAATTTGACATTTCACT 58.852 34.615 2.57 0.00 0.00 3.41
2214 2949 7.653311 GCCACTTTAGAATTTGACATTTCACTT 59.347 33.333 2.57 0.00 0.00 3.16
2215 2950 9.533253 CCACTTTAGAATTTGACATTTCACTTT 57.467 29.630 2.57 0.00 0.00 2.66
2218 2953 9.853921 CTTTAGAATTTGACATTTCACTTTTGC 57.146 29.630 2.57 0.00 0.00 3.68
2219 2954 6.849588 AGAATTTGACATTTCACTTTTGCC 57.150 33.333 2.57 0.00 0.00 4.52
2220 2955 6.347696 AGAATTTGACATTTCACTTTTGCCA 58.652 32.000 2.57 0.00 0.00 4.92
2221 2956 5.989551 ATTTGACATTTCACTTTTGCCAC 57.010 34.783 0.00 0.00 0.00 5.01
2222 2957 4.734398 TTGACATTTCACTTTTGCCACT 57.266 36.364 0.00 0.00 0.00 4.00
2223 2958 4.305989 TGACATTTCACTTTTGCCACTC 57.694 40.909 0.00 0.00 0.00 3.51
2224 2959 3.953612 TGACATTTCACTTTTGCCACTCT 59.046 39.130 0.00 0.00 0.00 3.24
2225 2960 4.402155 TGACATTTCACTTTTGCCACTCTT 59.598 37.500 0.00 0.00 0.00 2.85
2226 2961 5.592282 TGACATTTCACTTTTGCCACTCTTA 59.408 36.000 0.00 0.00 0.00 2.10
2227 2962 6.076981 ACATTTCACTTTTGCCACTCTTAG 57.923 37.500 0.00 0.00 0.00 2.18
2228 2963 4.568152 TTTCACTTTTGCCACTCTTAGC 57.432 40.909 0.00 0.00 0.00 3.09
2229 2964 3.492102 TCACTTTTGCCACTCTTAGCT 57.508 42.857 0.00 0.00 0.00 3.32
2230 2965 3.820557 TCACTTTTGCCACTCTTAGCTT 58.179 40.909 0.00 0.00 0.00 3.74
2231 2966 4.207165 TCACTTTTGCCACTCTTAGCTTT 58.793 39.130 0.00 0.00 0.00 3.51
2232 2967 4.644685 TCACTTTTGCCACTCTTAGCTTTT 59.355 37.500 0.00 0.00 0.00 2.27
2233 2968 4.741676 CACTTTTGCCACTCTTAGCTTTTG 59.258 41.667 0.00 0.00 0.00 2.44
2234 2969 4.644685 ACTTTTGCCACTCTTAGCTTTTGA 59.355 37.500 0.00 0.00 0.00 2.69
2235 2970 4.568152 TTTGCCACTCTTAGCTTTTGAC 57.432 40.909 0.00 0.00 0.00 3.18
2236 2971 3.207265 TGCCACTCTTAGCTTTTGACA 57.793 42.857 0.00 0.00 0.00 3.58
2237 2972 3.550820 TGCCACTCTTAGCTTTTGACAA 58.449 40.909 0.00 0.00 0.00 3.18
2238 2973 4.144297 TGCCACTCTTAGCTTTTGACAAT 58.856 39.130 0.00 0.00 0.00 2.71
2239 2974 5.312895 TGCCACTCTTAGCTTTTGACAATA 58.687 37.500 0.00 0.00 0.00 1.90
2240 2975 5.945784 TGCCACTCTTAGCTTTTGACAATAT 59.054 36.000 0.00 0.00 0.00 1.28
2241 2976 7.109501 TGCCACTCTTAGCTTTTGACAATATA 58.890 34.615 0.00 0.00 0.00 0.86
2242 2977 7.775093 TGCCACTCTTAGCTTTTGACAATATAT 59.225 33.333 0.00 0.00 0.00 0.86
2243 2978 8.286097 GCCACTCTTAGCTTTTGACAATATATC 58.714 37.037 0.00 0.00 0.00 1.63
2244 2979 9.330063 CCACTCTTAGCTTTTGACAATATATCA 57.670 33.333 0.00 0.00 0.00 2.15
2251 2986 8.693542 AGCTTTTGACAATATATCACTTTTGC 57.306 30.769 0.00 0.00 0.00 3.68
2252 2987 7.761249 AGCTTTTGACAATATATCACTTTTGCC 59.239 33.333 0.00 0.00 0.00 4.52
2253 2988 7.545265 GCTTTTGACAATATATCACTTTTGCCA 59.455 33.333 0.00 0.00 0.00 4.92
2254 2989 9.590451 CTTTTGACAATATATCACTTTTGCCAT 57.410 29.630 0.00 0.00 0.00 4.40
2255 2990 9.941325 TTTTGACAATATATCACTTTTGCCATT 57.059 25.926 0.00 0.00 0.00 3.16
2256 2991 9.585099 TTTGACAATATATCACTTTTGCCATTC 57.415 29.630 0.00 0.00 0.00 2.67
2257 2992 7.715657 TGACAATATATCACTTTTGCCATTCC 58.284 34.615 0.00 0.00 0.00 3.01
2258 2993 6.738114 ACAATATATCACTTTTGCCATTCCG 58.262 36.000 0.00 0.00 0.00 4.30
2259 2994 6.321181 ACAATATATCACTTTTGCCATTCCGT 59.679 34.615 0.00 0.00 0.00 4.69
2260 2995 4.637483 ATATCACTTTTGCCATTCCGTG 57.363 40.909 0.00 0.00 0.00 4.94
2268 3003 4.576993 CCATTCCGTGGCAAAAGC 57.423 55.556 0.00 0.00 42.12 3.51
2269 3004 1.664873 CCATTCCGTGGCAAAAGCA 59.335 52.632 0.00 0.00 42.12 3.91
2270 3005 0.033228 CCATTCCGTGGCAAAAGCAA 59.967 50.000 0.00 0.00 42.12 3.91
2271 3006 1.539929 CCATTCCGTGGCAAAAGCAAA 60.540 47.619 0.00 0.00 42.12 3.68
2272 3007 2.208431 CATTCCGTGGCAAAAGCAAAA 58.792 42.857 0.00 0.00 0.00 2.44
2273 3008 2.611225 TTCCGTGGCAAAAGCAAAAT 57.389 40.000 0.00 0.00 0.00 1.82
2274 3009 3.735237 TTCCGTGGCAAAAGCAAAATA 57.265 38.095 0.00 0.00 0.00 1.40
2275 3010 3.735237 TCCGTGGCAAAAGCAAAATAA 57.265 38.095 0.00 0.00 0.00 1.40
2276 3011 4.264460 TCCGTGGCAAAAGCAAAATAAT 57.736 36.364 0.00 0.00 0.00 1.28
2277 3012 4.636249 TCCGTGGCAAAAGCAAAATAATT 58.364 34.783 0.00 0.00 0.00 1.40
2278 3013 5.784177 TCCGTGGCAAAAGCAAAATAATTA 58.216 33.333 0.00 0.00 0.00 1.40
2279 3014 5.866633 TCCGTGGCAAAAGCAAAATAATTAG 59.133 36.000 0.00 0.00 0.00 1.73
2280 3015 5.866633 CCGTGGCAAAAGCAAAATAATTAGA 59.133 36.000 0.00 0.00 0.00 2.10
2281 3016 6.034898 CCGTGGCAAAAGCAAAATAATTAGAG 59.965 38.462 0.00 0.00 0.00 2.43
2282 3017 6.586082 CGTGGCAAAAGCAAAATAATTAGAGT 59.414 34.615 0.00 0.00 0.00 3.24
2283 3018 7.410728 CGTGGCAAAAGCAAAATAATTAGAGTG 60.411 37.037 0.00 0.00 0.00 3.51
2284 3019 6.873076 TGGCAAAAGCAAAATAATTAGAGTGG 59.127 34.615 0.00 0.00 0.00 4.00
2285 3020 6.183360 GGCAAAAGCAAAATAATTAGAGTGGC 60.183 38.462 0.00 0.00 0.00 5.01
2286 3021 6.368516 GCAAAAGCAAAATAATTAGAGTGGCA 59.631 34.615 0.00 0.00 0.00 4.92
2287 3022 7.095271 GCAAAAGCAAAATAATTAGAGTGGCAA 60.095 33.333 0.00 0.00 0.00 4.52
2288 3023 8.938906 CAAAAGCAAAATAATTAGAGTGGCAAT 58.061 29.630 0.00 0.00 0.00 3.56
2289 3024 9.506018 AAAAGCAAAATAATTAGAGTGGCAATT 57.494 25.926 0.00 0.00 0.00 2.32
2290 3025 8.483307 AAGCAAAATAATTAGAGTGGCAATTG 57.517 30.769 0.00 0.00 0.00 2.32
2291 3026 7.839907 AGCAAAATAATTAGAGTGGCAATTGA 58.160 30.769 10.34 0.00 0.00 2.57
2292 3027 7.977853 AGCAAAATAATTAGAGTGGCAATTGAG 59.022 33.333 10.34 0.00 0.00 3.02
2293 3028 7.975616 GCAAAATAATTAGAGTGGCAATTGAGA 59.024 33.333 10.34 0.00 0.00 3.27
2297 3032 9.851686 AATAATTAGAGTGGCAATTGAGATACA 57.148 29.630 10.34 0.00 0.00 2.29
2299 3034 7.741027 ATTAGAGTGGCAATTGAGATACATG 57.259 36.000 10.34 0.00 0.00 3.21
2300 3035 5.108187 AGAGTGGCAATTGAGATACATGT 57.892 39.130 10.34 2.69 0.00 3.21
2301 3036 5.121811 AGAGTGGCAATTGAGATACATGTC 58.878 41.667 10.34 0.00 0.00 3.06
2302 3037 4.847198 AGTGGCAATTGAGATACATGTCA 58.153 39.130 10.34 0.00 0.00 3.58
2303 3038 5.255687 AGTGGCAATTGAGATACATGTCAA 58.744 37.500 10.34 0.02 43.03 3.18
2305 3040 7.056006 AGTGGCAATTGAGATACATGTCAATA 58.944 34.615 10.34 0.00 46.22 1.90
2306 3041 7.228108 AGTGGCAATTGAGATACATGTCAATAG 59.772 37.037 10.34 0.00 46.22 1.73
2307 3042 6.016860 TGGCAATTGAGATACATGTCAATAGC 60.017 38.462 10.34 0.00 46.22 2.97
2308 3043 6.206243 GGCAATTGAGATACATGTCAATAGCT 59.794 38.462 10.34 0.00 46.22 3.32
2309 3044 7.388776 GGCAATTGAGATACATGTCAATAGCTA 59.611 37.037 10.34 0.00 46.22 3.32
2310 3045 8.777413 GCAATTGAGATACATGTCAATAGCTAA 58.223 33.333 10.34 0.00 46.22 3.09
2313 3048 9.926158 ATTGAGATACATGTCAATAGCTAAGAG 57.074 33.333 11.66 0.00 45.44 2.85
2314 3049 8.470657 TGAGATACATGTCAATAGCTAAGAGT 57.529 34.615 0.00 0.00 0.00 3.24
2315 3050 9.574516 TGAGATACATGTCAATAGCTAAGAGTA 57.425 33.333 0.00 0.00 0.00 2.59
2332 3067 6.942532 AAGAGTAGCAAAAGTGAAATGACA 57.057 33.333 0.00 0.00 0.00 3.58
2333 3068 6.942532 AGAGTAGCAAAAGTGAAATGACAA 57.057 33.333 0.00 0.00 0.00 3.18
2334 3069 7.333528 AGAGTAGCAAAAGTGAAATGACAAA 57.666 32.000 0.00 0.00 0.00 2.83
2335 3070 7.945134 AGAGTAGCAAAAGTGAAATGACAAAT 58.055 30.769 0.00 0.00 0.00 2.32
2336 3071 8.416329 AGAGTAGCAAAAGTGAAATGACAAATT 58.584 29.630 0.00 0.00 0.00 1.82
2337 3072 9.677567 GAGTAGCAAAAGTGAAATGACAAATTA 57.322 29.630 0.00 0.00 0.00 1.40
2340 3075 8.231304 AGCAAAAGTGAAATGACAAATTATCG 57.769 30.769 0.00 0.00 0.00 2.92
2341 3076 7.867403 AGCAAAAGTGAAATGACAAATTATCGT 59.133 29.630 0.00 0.00 0.00 3.73
2342 3077 8.487176 GCAAAAGTGAAATGACAAATTATCGTT 58.513 29.630 0.00 0.00 0.00 3.85
2347 3082 8.487176 AGTGAAATGACAAATTATCGTTTTTGC 58.513 29.630 9.88 5.59 35.83 3.68
2348 3083 7.739911 GTGAAATGACAAATTATCGTTTTTGCC 59.260 33.333 9.88 1.53 35.83 4.52
2349 3084 7.439356 TGAAATGACAAATTATCGTTTTTGCCA 59.561 29.630 9.88 0.00 35.83 4.92
2350 3085 7.903995 AATGACAAATTATCGTTTTTGCCAT 57.096 28.000 0.00 0.00 37.47 4.40
2351 3086 6.702972 TGACAAATTATCGTTTTTGCCATG 57.297 33.333 0.00 0.00 36.51 3.66
2352 3087 5.636965 TGACAAATTATCGTTTTTGCCATGG 59.363 36.000 7.63 7.63 36.51 3.66
2353 3088 5.788450 ACAAATTATCGTTTTTGCCATGGA 58.212 33.333 18.40 0.00 36.51 3.41
2354 3089 6.226787 ACAAATTATCGTTTTTGCCATGGAA 58.773 32.000 18.40 0.00 36.51 3.53
2355 3090 6.878389 ACAAATTATCGTTTTTGCCATGGAAT 59.122 30.769 18.40 0.00 36.51 3.01
2356 3091 6.907206 AATTATCGTTTTTGCCATGGAATG 57.093 33.333 18.40 6.34 46.21 2.67
2369 3104 4.131649 CATGGAATGGCATTTGTGATGT 57.868 40.909 14.93 0.00 41.79 3.06
2370 3105 5.265350 CATGGAATGGCATTTGTGATGTA 57.735 39.130 14.93 0.00 41.79 2.29
2371 3106 5.849510 CATGGAATGGCATTTGTGATGTAT 58.150 37.500 14.93 0.00 41.79 2.29
2372 3107 5.936187 TGGAATGGCATTTGTGATGTATT 57.064 34.783 14.93 0.00 0.00 1.89
2373 3108 5.662456 TGGAATGGCATTTGTGATGTATTG 58.338 37.500 14.93 0.00 0.00 1.90
2374 3109 5.187381 TGGAATGGCATTTGTGATGTATTGT 59.813 36.000 14.93 0.00 0.00 2.71
2375 3110 5.750067 GGAATGGCATTTGTGATGTATTGTC 59.250 40.000 14.93 0.00 0.00 3.18
2376 3111 5.918426 ATGGCATTTGTGATGTATTGTCA 57.082 34.783 0.00 0.00 0.00 3.58
2377 3112 5.718724 TGGCATTTGTGATGTATTGTCAA 57.281 34.783 0.00 0.00 0.00 3.18
2378 3113 6.094193 TGGCATTTGTGATGTATTGTCAAA 57.906 33.333 0.00 0.00 33.61 2.69
2379 3114 6.519382 TGGCATTTGTGATGTATTGTCAAAA 58.481 32.000 0.00 0.00 32.99 2.44
2380 3115 6.645827 TGGCATTTGTGATGTATTGTCAAAAG 59.354 34.615 0.00 0.00 32.99 2.27
2381 3116 6.646240 GGCATTTGTGATGTATTGTCAAAAGT 59.354 34.615 0.00 0.00 32.99 2.66
2382 3117 7.171337 GGCATTTGTGATGTATTGTCAAAAGTT 59.829 33.333 0.00 0.00 32.99 2.66
2383 3118 9.190858 GCATTTGTGATGTATTGTCAAAAGTTA 57.809 29.630 0.00 0.00 32.99 2.24
2388 3123 9.337396 TGTGATGTATTGTCAAAAGTTAAGAGT 57.663 29.630 0.00 0.00 0.00 3.24
2389 3124 9.599322 GTGATGTATTGTCAAAAGTTAAGAGTG 57.401 33.333 0.00 0.00 0.00 3.51
2390 3125 8.783093 TGATGTATTGTCAAAAGTTAAGAGTGG 58.217 33.333 0.00 0.00 0.00 4.00
2391 3126 6.966021 TGTATTGTCAAAAGTTAAGAGTGGC 58.034 36.000 0.00 0.00 0.00 5.01
2392 3127 6.544197 TGTATTGTCAAAAGTTAAGAGTGGCA 59.456 34.615 0.00 0.00 0.00 4.92
2393 3128 5.906113 TTGTCAAAAGTTAAGAGTGGCAA 57.094 34.783 0.00 0.00 31.76 4.52
2394 3129 5.906113 TGTCAAAAGTTAAGAGTGGCAAA 57.094 34.783 0.00 0.00 0.00 3.68
2395 3130 6.274157 TGTCAAAAGTTAAGAGTGGCAAAA 57.726 33.333 0.00 0.00 0.00 2.44
2396 3131 6.692486 TGTCAAAAGTTAAGAGTGGCAAAAA 58.308 32.000 0.00 0.00 0.00 1.94
2397 3132 7.327214 TGTCAAAAGTTAAGAGTGGCAAAAAT 58.673 30.769 0.00 0.00 0.00 1.82
2398 3133 7.277539 TGTCAAAAGTTAAGAGTGGCAAAAATG 59.722 33.333 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.244215 GGAGGAATGGATGCTATGTTCGA 60.244 47.826 0.00 0.00 0.00 3.71
1 2 3.070018 GGAGGAATGGATGCTATGTTCG 58.930 50.000 0.00 0.00 0.00 3.95
3 4 2.705658 TCGGAGGAATGGATGCTATGTT 59.294 45.455 0.00 0.00 0.00 2.71
4 5 2.329267 TCGGAGGAATGGATGCTATGT 58.671 47.619 0.00 0.00 0.00 2.29
6 7 3.176411 TGATCGGAGGAATGGATGCTAT 58.824 45.455 0.00 0.00 0.00 2.97
8 9 1.427809 TGATCGGAGGAATGGATGCT 58.572 50.000 0.00 0.00 0.00 3.79
9 10 2.260844 TTGATCGGAGGAATGGATGC 57.739 50.000 0.00 0.00 0.00 3.91
10 11 3.748083 ACATTGATCGGAGGAATGGATG 58.252 45.455 13.39 0.00 32.39 3.51
11 12 4.139786 CAACATTGATCGGAGGAATGGAT 58.860 43.478 13.39 3.22 32.39 3.41
12 13 3.544684 CAACATTGATCGGAGGAATGGA 58.455 45.455 13.39 0.00 32.39 3.41
13 14 2.620115 CCAACATTGATCGGAGGAATGG 59.380 50.000 13.39 3.11 32.39 3.16
14 15 2.620115 CCCAACATTGATCGGAGGAATG 59.380 50.000 9.19 9.19 33.99 2.67
15 16 2.423373 CCCCAACATTGATCGGAGGAAT 60.423 50.000 0.00 0.00 0.00 3.01
16 17 1.064758 CCCCAACATTGATCGGAGGAA 60.065 52.381 0.00 0.00 0.00 3.36
17 18 0.546122 CCCCAACATTGATCGGAGGA 59.454 55.000 0.00 0.00 0.00 3.71
18 19 0.546122 TCCCCAACATTGATCGGAGG 59.454 55.000 0.00 0.00 0.00 4.30
19 20 2.645838 ATCCCCAACATTGATCGGAG 57.354 50.000 0.00 0.00 0.00 4.63
20 21 3.306710 CGATATCCCCAACATTGATCGGA 60.307 47.826 0.00 2.55 33.00 4.55
21 22 3.002791 CGATATCCCCAACATTGATCGG 58.997 50.000 0.00 0.00 33.00 4.18
22 23 2.416547 GCGATATCCCCAACATTGATCG 59.583 50.000 0.00 7.79 38.14 3.69
23 24 3.679389 AGCGATATCCCCAACATTGATC 58.321 45.455 0.00 0.00 0.00 2.92
24 25 3.795688 AGCGATATCCCCAACATTGAT 57.204 42.857 0.00 0.00 0.00 2.57
25 26 3.576078 AAGCGATATCCCCAACATTGA 57.424 42.857 0.00 0.00 0.00 2.57
26 27 5.003160 TGATAAGCGATATCCCCAACATTG 58.997 41.667 9.26 0.00 39.83 2.82
27 28 5.241403 TGATAAGCGATATCCCCAACATT 57.759 39.130 9.26 0.00 39.83 2.71
28 29 4.323792 CCTGATAAGCGATATCCCCAACAT 60.324 45.833 9.26 0.00 39.83 2.71
29 30 3.007940 CCTGATAAGCGATATCCCCAACA 59.992 47.826 9.26 0.00 39.83 3.33
30 31 3.260884 TCCTGATAAGCGATATCCCCAAC 59.739 47.826 9.26 0.00 39.83 3.77
31 32 3.516586 TCCTGATAAGCGATATCCCCAA 58.483 45.455 9.26 0.00 39.83 4.12
32 33 3.184382 TCCTGATAAGCGATATCCCCA 57.816 47.619 9.26 0.00 39.83 4.96
33 34 3.515901 AGTTCCTGATAAGCGATATCCCC 59.484 47.826 9.26 0.00 39.83 4.81
34 35 4.810191 AGTTCCTGATAAGCGATATCCC 57.190 45.455 9.26 0.00 39.83 3.85
35 36 6.693545 CGATAAGTTCCTGATAAGCGATATCC 59.306 42.308 9.26 0.00 39.83 2.59
36 37 6.693545 CCGATAAGTTCCTGATAAGCGATATC 59.306 42.308 5.82 5.82 40.79 1.63
37 38 6.153000 ACCGATAAGTTCCTGATAAGCGATAT 59.847 38.462 0.00 0.00 0.00 1.63
38 39 5.475909 ACCGATAAGTTCCTGATAAGCGATA 59.524 40.000 0.00 0.00 0.00 2.92
39 40 4.281182 ACCGATAAGTTCCTGATAAGCGAT 59.719 41.667 0.00 0.00 0.00 4.58
40 41 3.635373 ACCGATAAGTTCCTGATAAGCGA 59.365 43.478 0.00 0.00 0.00 4.93
41 42 3.978687 ACCGATAAGTTCCTGATAAGCG 58.021 45.455 0.00 0.00 0.00 4.68
42 43 3.982058 CGACCGATAAGTTCCTGATAAGC 59.018 47.826 0.00 0.00 0.00 3.09
43 44 5.213675 GTCGACCGATAAGTTCCTGATAAG 58.786 45.833 3.51 0.00 0.00 1.73
44 45 4.037208 GGTCGACCGATAAGTTCCTGATAA 59.963 45.833 20.85 0.00 0.00 1.75
45 46 3.567164 GGTCGACCGATAAGTTCCTGATA 59.433 47.826 20.85 0.00 0.00 2.15
46 47 2.361438 GGTCGACCGATAAGTTCCTGAT 59.639 50.000 20.85 0.00 0.00 2.90
47 48 1.747355 GGTCGACCGATAAGTTCCTGA 59.253 52.381 20.85 0.00 0.00 3.86
48 49 1.202382 GGGTCGACCGATAAGTTCCTG 60.202 57.143 27.68 0.00 36.71 3.86
49 50 1.109609 GGGTCGACCGATAAGTTCCT 58.890 55.000 27.68 0.00 36.71 3.36
50 51 0.819582 TGGGTCGACCGATAAGTTCC 59.180 55.000 27.68 11.32 44.64 3.62
51 52 2.165030 TCTTGGGTCGACCGATAAGTTC 59.835 50.000 28.67 16.48 44.64 3.01
52 53 2.173519 TCTTGGGTCGACCGATAAGTT 58.826 47.619 28.67 0.00 44.64 2.66
53 54 1.843368 TCTTGGGTCGACCGATAAGT 58.157 50.000 28.67 0.00 44.64 2.24
54 55 4.547532 CTTATCTTGGGTCGACCGATAAG 58.452 47.826 32.99 32.99 44.64 1.73
55 56 3.319972 CCTTATCTTGGGTCGACCGATAA 59.680 47.826 27.51 27.51 44.64 1.75
56 57 2.889045 CCTTATCTTGGGTCGACCGATA 59.111 50.000 27.68 23.44 44.64 2.92
57 58 1.687123 CCTTATCTTGGGTCGACCGAT 59.313 52.381 27.68 24.41 44.64 4.18
58 59 1.108776 CCTTATCTTGGGTCGACCGA 58.891 55.000 27.68 22.29 44.64 4.69
59 60 0.104304 CCCTTATCTTGGGTCGACCG 59.896 60.000 27.68 14.74 44.64 4.79
60 61 0.468648 CCCCTTATCTTGGGTCGACC 59.531 60.000 27.04 27.04 43.09 4.79
67 68 3.146847 GCCGATTTACCCCTTATCTTGG 58.853 50.000 0.00 0.00 0.00 3.61
68 69 4.086706 AGCCGATTTACCCCTTATCTTG 57.913 45.455 0.00 0.00 0.00 3.02
69 70 4.906060 ACTAGCCGATTTACCCCTTATCTT 59.094 41.667 0.00 0.00 0.00 2.40
70 71 4.490706 ACTAGCCGATTTACCCCTTATCT 58.509 43.478 0.00 0.00 0.00 1.98
71 72 4.886496 ACTAGCCGATTTACCCCTTATC 57.114 45.455 0.00 0.00 0.00 1.75
72 73 5.641789 AAACTAGCCGATTTACCCCTTAT 57.358 39.130 0.00 0.00 0.00 1.73
73 74 6.517194 CGATAAACTAGCCGATTTACCCCTTA 60.517 42.308 0.00 0.00 0.00 2.69
74 75 5.618236 GATAAACTAGCCGATTTACCCCTT 58.382 41.667 0.00 0.00 0.00 3.95
75 76 4.262335 CGATAAACTAGCCGATTTACCCCT 60.262 45.833 0.00 0.00 0.00 4.79
76 77 3.992427 CGATAAACTAGCCGATTTACCCC 59.008 47.826 0.00 0.00 0.00 4.95
77 78 3.992427 CCGATAAACTAGCCGATTTACCC 59.008 47.826 0.00 0.00 0.00 3.69
78 79 3.431233 GCCGATAAACTAGCCGATTTACC 59.569 47.826 0.00 0.00 0.00 2.85
79 80 4.053295 TGCCGATAAACTAGCCGATTTAC 58.947 43.478 0.00 0.00 0.00 2.01
80 81 4.325028 TGCCGATAAACTAGCCGATTTA 57.675 40.909 0.00 0.00 0.00 1.40
81 82 3.188159 TGCCGATAAACTAGCCGATTT 57.812 42.857 0.00 0.00 0.00 2.17
82 83 2.902705 TGCCGATAAACTAGCCGATT 57.097 45.000 0.00 0.00 0.00 3.34
83 84 4.737855 ATATGCCGATAAACTAGCCGAT 57.262 40.909 0.00 0.00 0.00 4.18
84 85 4.242475 CAATATGCCGATAAACTAGCCGA 58.758 43.478 0.00 0.00 0.00 5.54
85 86 3.370978 CCAATATGCCGATAAACTAGCCG 59.629 47.826 0.00 0.00 0.00 5.52
86 87 3.127030 GCCAATATGCCGATAAACTAGCC 59.873 47.826 0.00 0.00 0.00 3.93
87 88 4.003648 AGCCAATATGCCGATAAACTAGC 58.996 43.478 0.00 0.00 0.00 3.42
88 89 5.237815 TCAGCCAATATGCCGATAAACTAG 58.762 41.667 0.00 0.00 0.00 2.57
89 90 5.222079 TCAGCCAATATGCCGATAAACTA 57.778 39.130 0.00 0.00 0.00 2.24
90 91 4.085357 TCAGCCAATATGCCGATAAACT 57.915 40.909 0.00 0.00 0.00 2.66
91 92 5.376854 AATCAGCCAATATGCCGATAAAC 57.623 39.130 0.00 0.00 28.51 2.01
92 93 7.413988 CGATAAATCAGCCAATATGCCGATAAA 60.414 37.037 0.00 0.00 28.51 1.40
93 94 6.037062 CGATAAATCAGCCAATATGCCGATAA 59.963 38.462 0.00 0.00 28.51 1.75
94 95 5.523552 CGATAAATCAGCCAATATGCCGATA 59.476 40.000 0.00 0.00 28.51 2.92
95 96 4.333649 CGATAAATCAGCCAATATGCCGAT 59.666 41.667 0.00 0.00 29.74 4.18
96 97 3.684305 CGATAAATCAGCCAATATGCCGA 59.316 43.478 0.00 0.00 0.00 5.54
97 98 3.728864 GCGATAAATCAGCCAATATGCCG 60.729 47.826 0.00 0.00 0.00 5.69
98 99 3.428045 GGCGATAAATCAGCCAATATGCC 60.428 47.826 16.00 3.52 42.19 4.40
99 100 3.191162 TGGCGATAAATCAGCCAATATGC 59.809 43.478 19.27 0.86 45.90 3.14
106 107 3.307242 GTCGATATGGCGATAAATCAGCC 59.693 47.826 14.77 14.77 42.82 4.85
107 108 4.177026 AGTCGATATGGCGATAAATCAGC 58.823 43.478 0.00 0.00 42.82 4.26
108 109 7.993821 ATTAGTCGATATGGCGATAAATCAG 57.006 36.000 0.00 0.00 42.82 2.90
109 110 8.771920 AAATTAGTCGATATGGCGATAAATCA 57.228 30.769 0.00 0.00 42.82 2.57
112 113 9.016623 CGATAAATTAGTCGATATGGCGATAAA 57.983 33.333 6.56 0.00 42.82 1.40
113 114 7.646526 CCGATAAATTAGTCGATATGGCGATAA 59.353 37.037 12.42 0.00 42.82 1.75
114 115 7.136772 CCGATAAATTAGTCGATATGGCGATA 58.863 38.462 12.42 0.00 42.82 2.92
115 116 5.977725 CCGATAAATTAGTCGATATGGCGAT 59.022 40.000 12.42 0.00 42.82 4.58
116 117 5.337554 CCGATAAATTAGTCGATATGGCGA 58.662 41.667 12.42 0.00 40.11 5.54
117 118 4.026804 GCCGATAAATTAGTCGATATGGCG 60.027 45.833 12.42 0.00 40.11 5.69
118 119 4.270325 GGCCGATAAATTAGTCGATATGGC 59.730 45.833 12.42 7.61 40.11 4.40
119 120 4.503007 CGGCCGATAAATTAGTCGATATGG 59.497 45.833 24.07 0.00 40.11 2.74
120 121 5.337554 TCGGCCGATAAATTAGTCGATATG 58.662 41.667 27.28 0.00 40.11 1.78
121 122 5.571784 TCGGCCGATAAATTAGTCGATAT 57.428 39.130 27.28 0.00 40.11 1.63
122 123 5.571784 ATCGGCCGATAAATTAGTCGATA 57.428 39.130 38.39 6.68 40.11 2.92
123 124 3.928727 TCGGCCGATAAATTAGTCGAT 57.071 42.857 27.28 0.00 40.11 3.59
124 125 3.928727 ATCGGCCGATAAATTAGTCGA 57.071 42.857 38.39 7.97 40.11 4.20
125 126 4.985044 AAATCGGCCGATAAATTAGTCG 57.015 40.909 39.08 1.99 37.58 4.18
126 127 7.829378 AGATAAATCGGCCGATAAATTAGTC 57.171 36.000 39.08 26.38 33.97 2.59
127 128 9.886132 ATAAGATAAATCGGCCGATAAATTAGT 57.114 29.630 39.08 20.34 33.97 2.24
129 130 9.027129 CGATAAGATAAATCGGCCGATAAATTA 57.973 33.333 39.08 31.17 41.91 1.40
130 131 7.762615 TCGATAAGATAAATCGGCCGATAAATT 59.237 33.333 39.08 30.15 44.88 1.82
131 132 7.262772 TCGATAAGATAAATCGGCCGATAAAT 58.737 34.615 39.08 31.97 44.88 1.40
132 133 6.623486 TCGATAAGATAAATCGGCCGATAAA 58.377 36.000 39.08 29.07 44.88 1.40
133 134 6.198650 TCGATAAGATAAATCGGCCGATAA 57.801 37.500 39.08 29.42 44.88 1.75
134 135 5.823209 TCGATAAGATAAATCGGCCGATA 57.177 39.130 39.08 26.08 44.88 2.92
135 136 4.713824 TCGATAAGATAAATCGGCCGAT 57.286 40.909 34.60 34.60 44.88 4.18
136 137 4.157105 TGATCGATAAGATAAATCGGCCGA 59.843 41.667 33.12 33.12 44.88 5.54
137 138 4.421058 TGATCGATAAGATAAATCGGCCG 58.579 43.478 22.12 22.12 44.88 6.13
138 139 5.517054 GTCTGATCGATAAGATAAATCGGCC 59.483 44.000 15.72 0.00 44.88 6.13
139 140 6.093404 TGTCTGATCGATAAGATAAATCGGC 58.907 40.000 15.72 1.20 44.88 5.54
140 141 6.252441 GCTGTCTGATCGATAAGATAAATCGG 59.748 42.308 15.72 8.48 44.88 4.18
141 142 6.021861 CGCTGTCTGATCGATAAGATAAATCG 60.022 42.308 15.72 11.89 45.88 3.34
142 143 6.252441 CCGCTGTCTGATCGATAAGATAAATC 59.748 42.308 15.72 3.30 40.26 2.17
143 144 6.096036 CCGCTGTCTGATCGATAAGATAAAT 58.904 40.000 15.72 0.00 40.26 1.40
144 145 5.009710 ACCGCTGTCTGATCGATAAGATAAA 59.990 40.000 15.72 4.48 40.26 1.40
145 146 4.519350 ACCGCTGTCTGATCGATAAGATAA 59.481 41.667 15.72 6.82 40.26 1.75
146 147 4.072839 ACCGCTGTCTGATCGATAAGATA 58.927 43.478 15.72 12.05 40.26 1.98
147 148 2.887783 ACCGCTGTCTGATCGATAAGAT 59.112 45.455 15.72 0.00 43.51 2.40
148 149 2.298610 ACCGCTGTCTGATCGATAAGA 58.701 47.619 8.52 8.52 0.00 2.10
149 150 2.783828 ACCGCTGTCTGATCGATAAG 57.216 50.000 3.01 3.01 0.00 1.73
150 151 3.550233 GCTTACCGCTGTCTGATCGATAA 60.550 47.826 0.00 0.00 35.14 1.75
151 152 2.031069 GCTTACCGCTGTCTGATCGATA 60.031 50.000 0.00 0.00 35.14 2.92
152 153 1.269309 GCTTACCGCTGTCTGATCGAT 60.269 52.381 0.00 0.00 35.14 3.59
153 154 0.100682 GCTTACCGCTGTCTGATCGA 59.899 55.000 0.00 0.00 35.14 3.59
154 155 1.202973 CGCTTACCGCTGTCTGATCG 61.203 60.000 0.00 0.00 36.13 3.69
155 156 0.100682 TCGCTTACCGCTGTCTGATC 59.899 55.000 0.00 0.00 36.73 2.92
156 157 0.747255 ATCGCTTACCGCTGTCTGAT 59.253 50.000 0.00 0.00 36.73 2.90
157 158 1.385528 TATCGCTTACCGCTGTCTGA 58.614 50.000 0.00 0.00 36.73 3.27
158 159 2.203800 TTATCGCTTACCGCTGTCTG 57.796 50.000 0.00 0.00 36.73 3.51
159 160 2.953466 TTTATCGCTTACCGCTGTCT 57.047 45.000 0.00 0.00 36.73 3.41
160 161 2.153247 CGATTTATCGCTTACCGCTGTC 59.847 50.000 0.00 0.00 43.84 3.51
161 162 2.124903 CGATTTATCGCTTACCGCTGT 58.875 47.619 0.00 0.00 43.84 4.40
162 163 2.837337 CGATTTATCGCTTACCGCTG 57.163 50.000 0.00 0.00 43.84 5.18
197 198 9.319060 AGGCACTATTCAAGATATCTTCTGATA 57.681 33.333 15.24 11.77 36.02 2.15
198 199 8.204903 AGGCACTATTCAAGATATCTTCTGAT 57.795 34.615 15.24 11.31 36.02 2.90
199 200 7.256119 GGAGGCACTATTCAAGATATCTTCTGA 60.256 40.741 15.24 8.89 41.55 3.27
200 201 6.873076 GGAGGCACTATTCAAGATATCTTCTG 59.127 42.308 15.24 6.54 41.55 3.02
201 202 6.295011 CGGAGGCACTATTCAAGATATCTTCT 60.295 42.308 15.24 6.16 41.55 2.85
202 203 5.866633 CGGAGGCACTATTCAAGATATCTTC 59.133 44.000 15.24 1.82 41.55 2.87
203 204 5.540337 TCGGAGGCACTATTCAAGATATCTT 59.460 40.000 12.37 12.37 41.55 2.40
204 205 5.080337 TCGGAGGCACTATTCAAGATATCT 58.920 41.667 0.00 0.00 41.55 1.98
205 206 5.392767 TCGGAGGCACTATTCAAGATATC 57.607 43.478 0.00 0.00 41.55 1.63
206 207 5.105146 GGATCGGAGGCACTATTCAAGATAT 60.105 44.000 0.00 0.00 41.55 1.63
207 208 4.220821 GGATCGGAGGCACTATTCAAGATA 59.779 45.833 0.00 0.00 41.55 1.98
208 209 3.007398 GGATCGGAGGCACTATTCAAGAT 59.993 47.826 0.00 0.00 41.55 2.40
209 210 2.365617 GGATCGGAGGCACTATTCAAGA 59.634 50.000 0.00 0.00 41.55 3.02
210 211 2.548920 GGGATCGGAGGCACTATTCAAG 60.549 54.545 0.00 0.00 41.55 3.02
211 212 1.416401 GGGATCGGAGGCACTATTCAA 59.584 52.381 0.00 0.00 41.55 2.69
212 213 1.048601 GGGATCGGAGGCACTATTCA 58.951 55.000 0.00 0.00 41.55 2.57
213 214 0.038159 CGGGATCGGAGGCACTATTC 60.038 60.000 0.00 0.00 41.55 1.75
214 215 0.759436 ACGGGATCGGAGGCACTATT 60.759 55.000 0.00 0.00 38.43 1.73
215 216 1.152525 ACGGGATCGGAGGCACTAT 60.153 57.895 0.00 0.00 38.43 2.12
216 217 2.125326 CACGGGATCGGAGGCACTA 61.125 63.158 0.00 0.00 38.43 2.74
217 218 3.461773 CACGGGATCGGAGGCACT 61.462 66.667 0.00 0.00 40.50 4.40
218 219 3.432051 CTCACGGGATCGGAGGCAC 62.432 68.421 0.00 0.00 41.39 5.01
219 220 3.147595 CTCACGGGATCGGAGGCA 61.148 66.667 0.00 0.00 41.39 4.75
220 221 4.593864 GCTCACGGGATCGGAGGC 62.594 72.222 0.00 0.00 41.39 4.70
236 237 0.250513 AAACACGGATCCAGGAGAGC 59.749 55.000 13.41 0.00 0.00 4.09
470 493 3.780804 TTCCAGAAACCAATCCTCGAA 57.219 42.857 0.00 0.00 0.00 3.71
482 517 3.251484 AGAGGACAGGTGATTCCAGAAA 58.749 45.455 0.00 0.00 39.02 2.52
512 547 0.178861 ATGGGAGGGGAAGGCGATAT 60.179 55.000 0.00 0.00 0.00 1.63
520 555 0.552367 ATGTGTCCATGGGAGGGGAA 60.552 55.000 13.02 0.00 34.34 3.97
538 579 1.152881 GGGCAGGAAGGCGAATGAT 60.153 57.895 0.00 0.00 45.36 2.45
570 612 0.321919 TGCAGCTGTCCAACAGATCC 60.322 55.000 16.64 0.00 41.62 3.36
640 682 1.460359 GCACACCAAATCAAAATGGCG 59.540 47.619 0.00 0.00 40.51 5.69
647 689 3.663995 CAGGATTGCACACCAAATCAA 57.336 42.857 10.40 0.00 36.92 2.57
722 773 0.869880 GTTGAAGCCCAAACGTGTGC 60.870 55.000 0.00 0.00 36.36 4.57
745 796 2.839486 TGGAAATGCGAAGACAGAGT 57.161 45.000 0.00 0.00 0.00 3.24
789 840 4.513442 CCACTCCGGAAATGAAGTTATCA 58.487 43.478 15.46 0.00 38.95 2.15
802 877 2.997315 CACTCCAGCCACTCCGGA 60.997 66.667 2.93 2.93 36.56 5.14
803 878 4.087892 CCACTCCAGCCACTCCGG 62.088 72.222 0.00 0.00 38.11 5.14
804 879 4.767255 GCCACTCCAGCCACTCCG 62.767 72.222 0.00 0.00 0.00 4.63
805 880 3.618780 CTGCCACTCCAGCCACTCC 62.619 68.421 0.00 0.00 0.00 3.85
806 881 2.046507 CTGCCACTCCAGCCACTC 60.047 66.667 0.00 0.00 0.00 3.51
807 882 2.851102 ACTGCCACTCCAGCCACT 60.851 61.111 0.00 0.00 36.29 4.00
808 883 2.111999 TACACTGCCACTCCAGCCAC 62.112 60.000 0.00 0.00 36.29 5.01
809 884 1.200760 ATACACTGCCACTCCAGCCA 61.201 55.000 0.00 0.00 36.29 4.75
810 885 0.035056 AATACACTGCCACTCCAGCC 60.035 55.000 0.00 0.00 36.29 4.85
813 888 0.973632 ACGAATACACTGCCACTCCA 59.026 50.000 0.00 0.00 0.00 3.86
906 984 6.534934 CAGATAGCCGTTAAGAAAGACAAAC 58.465 40.000 0.00 0.00 0.00 2.93
986 1073 1.102978 GTTCATCCATGTTTCCCCGG 58.897 55.000 0.00 0.00 0.00 5.73
1035 1145 4.675146 CGGCCCTGTGAATGTTGAATAAAG 60.675 45.833 0.00 0.00 0.00 1.85
1070 1180 6.893554 ACCATCTTCATCCATCTGAAAATTGA 59.106 34.615 0.00 0.00 34.86 2.57
1082 1192 1.984424 TGACACCACCATCTTCATCCA 59.016 47.619 0.00 0.00 0.00 3.41
1083 1193 2.787473 TGACACCACCATCTTCATCC 57.213 50.000 0.00 0.00 0.00 3.51
1103 1219 9.778741 TCTCAAGAACATAAACTACAAGTTGAT 57.221 29.630 10.54 0.00 38.66 2.57
1207 1325 3.766591 ACGGCAATCCAATCAAACCAATA 59.233 39.130 0.00 0.00 0.00 1.90
1210 1346 1.626686 ACGGCAATCCAATCAAACCA 58.373 45.000 0.00 0.00 0.00 3.67
1227 1363 1.086696 AGTTGCATTCCGGATGAACG 58.913 50.000 4.15 0.00 38.03 3.95
1265 1401 1.278985 ACATGAGTTTGAGATCCCGCA 59.721 47.619 0.00 0.00 0.00 5.69
1300 1436 3.745975 CAGATTACTTTGACTTGCCGACA 59.254 43.478 0.00 0.00 0.00 4.35
1317 1453 3.087031 CACACCTTCCAGATTGCAGATT 58.913 45.455 0.00 0.00 0.00 2.40
1353 1489 1.946768 GCATACAACGGCACATATGGT 59.053 47.619 7.80 0.00 0.00 3.55
1374 1510 2.857186 TGCACAATGCCTCTAACTCA 57.143 45.000 0.00 0.00 44.23 3.41
1440 1579 6.590292 CCACTGGTAGTATACAGAAACAAGTG 59.410 42.308 18.80 18.80 45.43 3.16
1529 1672 7.930865 GCTGATAAGTCCTTCACTAAATGATCT 59.069 37.037 0.00 0.00 37.11 2.75
1555 1698 4.913335 AGTTTAAGCTGCATGATGATGG 57.087 40.909 1.02 0.00 0.00 3.51
1556 1699 7.423199 ACATAAGTTTAAGCTGCATGATGATG 58.577 34.615 16.29 0.00 0.00 3.07
1630 1773 7.555554 ACGAGCAATAGTTTTACTAGGTCTCTA 59.444 37.037 0.00 0.00 33.66 2.43
1666 1809 9.224267 AGAAAGATATGATCCCACAAATTATCG 57.776 33.333 0.00 0.00 0.00 2.92
1692 1835 7.038659 GGCCACATGTAATTAGCATTTAACAA 58.961 34.615 0.00 0.00 0.00 2.83
1695 1838 8.704849 ATAGGCCACATGTAATTAGCATTTAA 57.295 30.769 5.01 0.00 0.00 1.52
1719 1862 7.708998 TGCTAACACCTTTTTCGACTTAAAAT 58.291 30.769 0.00 0.00 0.00 1.82
1751 2457 9.357652 GAACAATTGTGTACATTATGATTGCTT 57.642 29.630 12.82 3.92 36.80 3.91
1813 2539 6.053005 ACCCACCTACATGAATAAATGTACG 58.947 40.000 0.00 0.00 41.09 3.67
1858 2585 1.017387 GCGGGAGTAGCATTTGAAGG 58.983 55.000 0.00 0.00 34.19 3.46
1875 2602 4.895224 TGTAACTATCAGTAGGACTGCG 57.105 45.455 1.60 0.00 45.54 5.18
1878 2605 8.001875 AGACATCATGTAACTATCAGTAGGACT 58.998 37.037 0.00 0.00 31.96 3.85
1879 2606 8.079203 CAGACATCATGTAACTATCAGTAGGAC 58.921 40.741 0.00 0.00 31.96 3.85
1880 2607 7.780271 ACAGACATCATGTAACTATCAGTAGGA 59.220 37.037 0.00 0.00 31.96 2.94
1881 2608 7.946207 ACAGACATCATGTAACTATCAGTAGG 58.054 38.462 0.00 0.00 31.96 3.18
1884 2611 9.809096 CTTTACAGACATCATGTAACTATCAGT 57.191 33.333 0.00 0.00 41.53 3.41
1909 2636 1.951510 CTGGATTGTGCGTGCAACT 59.048 52.632 0.00 0.00 31.75 3.16
1968 2703 1.002868 GAGCCATGACAGCCACAGT 60.003 57.895 0.00 0.00 0.00 3.55
1987 2722 4.577283 GTGTGGTAACTGAAGCTAAAACCA 59.423 41.667 0.00 0.00 33.30 3.67
1993 2728 4.682778 AACTGTGTGGTAACTGAAGCTA 57.317 40.909 0.00 0.00 37.61 3.32
2002 2737 4.506937 ACCCAGTTAAACTGTGTGGTAA 57.493 40.909 0.00 0.00 44.50 2.85
2011 2746 2.107552 TGCAGGCTTACCCAGTTAAACT 59.892 45.455 0.00 0.00 36.11 2.66
2017 2752 0.995024 AGAATGCAGGCTTACCCAGT 59.005 50.000 0.00 0.00 36.11 4.00
2024 2759 0.963962 CCACACAAGAATGCAGGCTT 59.036 50.000 0.00 0.00 0.00 4.35
2078 2813 8.556589 TGTTCAATATCAAGAAATAGGGAGGAA 58.443 33.333 0.00 0.00 0.00 3.36
2097 2832 8.186821 GCTAAAATCTAGAGTGCATTGTTCAAT 58.813 33.333 0.00 0.00 0.00 2.57
2101 2836 6.881065 TCAGCTAAAATCTAGAGTGCATTGTT 59.119 34.615 0.00 0.00 0.00 2.83
2102 2837 6.409704 TCAGCTAAAATCTAGAGTGCATTGT 58.590 36.000 0.00 0.00 0.00 2.71
2118 2853 7.455058 TCCCATAAGTTAACAGTTCAGCTAAA 58.545 34.615 8.61 0.00 0.00 1.85
2138 2873 4.397730 GTGGCAAAAACAAAGTTTTCCCAT 59.602 37.500 20.53 2.73 30.72 4.00
2139 2874 3.753797 GTGGCAAAAACAAAGTTTTCCCA 59.246 39.130 16.78 16.78 0.00 4.37
2140 2875 4.006989 AGTGGCAAAAACAAAGTTTTCCC 58.993 39.130 8.16 11.39 0.00 3.97
2141 2876 4.935205 AGAGTGGCAAAAACAAAGTTTTCC 59.065 37.500 8.16 7.10 0.00 3.13
2142 2877 6.811665 ACTAGAGTGGCAAAAACAAAGTTTTC 59.188 34.615 8.16 0.00 0.00 2.29
2143 2878 6.697395 ACTAGAGTGGCAAAAACAAAGTTTT 58.303 32.000 0.00 2.26 0.00 2.43
2144 2879 6.280855 ACTAGAGTGGCAAAAACAAAGTTT 57.719 33.333 0.00 0.00 0.00 2.66
2145 2880 5.914898 ACTAGAGTGGCAAAAACAAAGTT 57.085 34.783 0.00 0.00 0.00 2.66
2146 2881 5.914898 AACTAGAGTGGCAAAAACAAAGT 57.085 34.783 0.00 0.00 0.00 2.66
2147 2882 7.595311 AAAAACTAGAGTGGCAAAAACAAAG 57.405 32.000 0.00 0.00 0.00 2.77
2168 2903 3.563390 GGCATAAGCAAAGTTGGCAAAAA 59.437 39.130 4.74 0.00 44.61 1.94
2169 2904 3.137533 GGCATAAGCAAAGTTGGCAAAA 58.862 40.909 4.74 0.00 44.61 2.44
2170 2905 2.103771 TGGCATAAGCAAAGTTGGCAAA 59.896 40.909 4.74 0.00 44.61 3.68
2171 2906 1.690893 TGGCATAAGCAAAGTTGGCAA 59.309 42.857 4.74 0.00 44.61 4.52
2172 2907 1.000731 GTGGCATAAGCAAAGTTGGCA 59.999 47.619 4.74 0.00 44.61 4.92
2173 2908 1.273327 AGTGGCATAAGCAAAGTTGGC 59.727 47.619 0.00 0.00 44.61 4.52
2174 2909 3.665745 AAGTGGCATAAGCAAAGTTGG 57.334 42.857 0.00 0.00 44.61 3.77
2175 2910 6.012658 TCTAAAGTGGCATAAGCAAAGTTG 57.987 37.500 0.00 0.00 44.61 3.16
2176 2911 6.648879 TTCTAAAGTGGCATAAGCAAAGTT 57.351 33.333 0.00 0.00 44.61 2.66
2177 2912 6.840780 ATTCTAAAGTGGCATAAGCAAAGT 57.159 33.333 0.00 0.00 44.61 2.66
2178 2913 7.814107 TCAAATTCTAAAGTGGCATAAGCAAAG 59.186 33.333 0.00 0.00 44.61 2.77
2179 2914 7.598493 GTCAAATTCTAAAGTGGCATAAGCAAA 59.402 33.333 0.00 0.00 44.61 3.68
2180 2915 7.090173 GTCAAATTCTAAAGTGGCATAAGCAA 58.910 34.615 0.00 0.00 44.61 3.91
2181 2916 6.208402 TGTCAAATTCTAAAGTGGCATAAGCA 59.792 34.615 0.00 0.00 44.61 3.91
2182 2917 6.620678 TGTCAAATTCTAAAGTGGCATAAGC 58.379 36.000 0.00 0.00 41.10 3.09
2183 2918 9.643693 AAATGTCAAATTCTAAAGTGGCATAAG 57.356 29.630 0.00 0.00 35.34 1.73
2184 2919 9.638239 GAAATGTCAAATTCTAAAGTGGCATAA 57.362 29.630 0.00 0.00 35.34 1.90
2185 2920 8.801299 TGAAATGTCAAATTCTAAAGTGGCATA 58.199 29.630 0.00 0.00 35.34 3.14
2186 2921 7.599998 GTGAAATGTCAAATTCTAAAGTGGCAT 59.400 33.333 0.00 0.00 37.91 4.40
2187 2922 6.922957 GTGAAATGTCAAATTCTAAAGTGGCA 59.077 34.615 0.00 0.00 34.87 4.92
2188 2923 7.147976 AGTGAAATGTCAAATTCTAAAGTGGC 58.852 34.615 0.00 0.00 34.87 5.01
2189 2924 9.533253 AAAGTGAAATGTCAAATTCTAAAGTGG 57.467 29.630 0.00 0.00 34.87 4.00
2192 2927 9.853921 GCAAAAGTGAAATGTCAAATTCTAAAG 57.146 29.630 0.00 0.00 34.87 1.85
2193 2928 8.825745 GGCAAAAGTGAAATGTCAAATTCTAAA 58.174 29.630 0.00 0.00 34.87 1.85
2194 2929 7.984050 TGGCAAAAGTGAAATGTCAAATTCTAA 59.016 29.630 0.00 0.00 34.87 2.10
2195 2930 7.437862 GTGGCAAAAGTGAAATGTCAAATTCTA 59.562 33.333 0.00 0.00 34.87 2.10
2196 2931 6.258507 GTGGCAAAAGTGAAATGTCAAATTCT 59.741 34.615 0.00 0.00 34.87 2.40
2197 2932 6.258507 AGTGGCAAAAGTGAAATGTCAAATTC 59.741 34.615 0.00 0.00 34.87 2.17
2198 2933 6.114767 AGTGGCAAAAGTGAAATGTCAAATT 58.885 32.000 0.00 0.00 34.87 1.82
2199 2934 5.673514 AGTGGCAAAAGTGAAATGTCAAAT 58.326 33.333 0.00 0.00 34.87 2.32
2200 2935 5.083533 AGTGGCAAAAGTGAAATGTCAAA 57.916 34.783 0.00 0.00 34.87 2.69
2201 2936 4.402155 AGAGTGGCAAAAGTGAAATGTCAA 59.598 37.500 0.00 0.00 34.87 3.18
2202 2937 3.953612 AGAGTGGCAAAAGTGAAATGTCA 59.046 39.130 0.00 0.00 0.00 3.58
2203 2938 4.574599 AGAGTGGCAAAAGTGAAATGTC 57.425 40.909 0.00 0.00 0.00 3.06
2204 2939 5.507985 GCTAAGAGTGGCAAAAGTGAAATGT 60.508 40.000 0.00 0.00 0.00 2.71
2205 2940 4.919754 GCTAAGAGTGGCAAAAGTGAAATG 59.080 41.667 0.00 0.00 0.00 2.32
2206 2941 4.829492 AGCTAAGAGTGGCAAAAGTGAAAT 59.171 37.500 0.00 0.00 32.62 2.17
2207 2942 4.207165 AGCTAAGAGTGGCAAAAGTGAAA 58.793 39.130 0.00 0.00 32.62 2.69
2208 2943 3.820557 AGCTAAGAGTGGCAAAAGTGAA 58.179 40.909 0.00 0.00 32.62 3.18
2209 2944 3.492102 AGCTAAGAGTGGCAAAAGTGA 57.508 42.857 0.00 0.00 32.62 3.41
2210 2945 4.574599 AAAGCTAAGAGTGGCAAAAGTG 57.425 40.909 0.00 0.00 32.62 3.16
2211 2946 4.644685 TCAAAAGCTAAGAGTGGCAAAAGT 59.355 37.500 0.00 0.00 32.62 2.66
2212 2947 4.978580 GTCAAAAGCTAAGAGTGGCAAAAG 59.021 41.667 0.00 0.00 32.62 2.27
2213 2948 4.400884 TGTCAAAAGCTAAGAGTGGCAAAA 59.599 37.500 0.00 0.00 32.62 2.44
2214 2949 3.951037 TGTCAAAAGCTAAGAGTGGCAAA 59.049 39.130 0.00 0.00 32.62 3.68
2215 2950 3.550820 TGTCAAAAGCTAAGAGTGGCAA 58.449 40.909 0.00 0.00 32.62 4.52
2216 2951 3.207265 TGTCAAAAGCTAAGAGTGGCA 57.793 42.857 0.00 0.00 32.62 4.92
2217 2952 4.773323 ATTGTCAAAAGCTAAGAGTGGC 57.227 40.909 0.00 0.00 0.00 5.01
2218 2953 9.330063 TGATATATTGTCAAAAGCTAAGAGTGG 57.670 33.333 0.00 0.00 0.00 4.00
2225 2960 9.787532 GCAAAAGTGATATATTGTCAAAAGCTA 57.212 29.630 0.00 0.00 0.00 3.32
2226 2961 7.761249 GGCAAAAGTGATATATTGTCAAAAGCT 59.239 33.333 0.00 0.00 0.00 3.74
2227 2962 7.545265 TGGCAAAAGTGATATATTGTCAAAAGC 59.455 33.333 0.00 0.00 34.74 3.51
2228 2963 8.984891 TGGCAAAAGTGATATATTGTCAAAAG 57.015 30.769 0.00 0.00 34.74 2.27
2229 2964 9.941325 AATGGCAAAAGTGATATATTGTCAAAA 57.059 25.926 0.00 0.00 40.35 2.44
2230 2965 9.585099 GAATGGCAAAAGTGATATATTGTCAAA 57.415 29.630 0.00 0.00 40.35 2.69
2231 2966 8.196771 GGAATGGCAAAAGTGATATATTGTCAA 58.803 33.333 0.00 0.00 40.35 3.18
2232 2967 7.468494 CGGAATGGCAAAAGTGATATATTGTCA 60.468 37.037 0.00 0.00 41.11 3.58
2233 2968 6.857964 CGGAATGGCAAAAGTGATATATTGTC 59.142 38.462 0.00 0.00 0.00 3.18
2234 2969 6.321181 ACGGAATGGCAAAAGTGATATATTGT 59.679 34.615 0.00 0.00 0.00 2.71
2235 2970 6.638063 CACGGAATGGCAAAAGTGATATATTG 59.362 38.462 9.20 0.00 0.00 1.90
2236 2971 6.239008 CCACGGAATGGCAAAAGTGATATATT 60.239 38.462 14.36 0.00 43.24 1.28
2237 2972 5.241506 CCACGGAATGGCAAAAGTGATATAT 59.758 40.000 14.36 0.00 43.24 0.86
2238 2973 4.578516 CCACGGAATGGCAAAAGTGATATA 59.421 41.667 14.36 0.00 43.24 0.86
2239 2974 3.381272 CCACGGAATGGCAAAAGTGATAT 59.619 43.478 14.36 0.00 43.24 1.63
2240 2975 2.752354 CCACGGAATGGCAAAAGTGATA 59.248 45.455 14.36 0.00 43.24 2.15
2241 2976 1.545582 CCACGGAATGGCAAAAGTGAT 59.454 47.619 14.36 0.00 43.24 3.06
2242 2977 0.958091 CCACGGAATGGCAAAAGTGA 59.042 50.000 14.36 0.00 43.24 3.41
2243 2978 3.495124 CCACGGAATGGCAAAAGTG 57.505 52.632 0.00 0.00 43.24 3.16
2252 2987 1.863267 TTTGCTTTTGCCACGGAATG 58.137 45.000 0.00 0.00 46.87 2.67
2253 2988 2.611225 TTTTGCTTTTGCCACGGAAT 57.389 40.000 0.00 0.00 46.87 3.01
2254 2989 2.611225 ATTTTGCTTTTGCCACGGAA 57.389 40.000 0.00 0.00 46.87 4.30
2255 2990 3.735237 TTATTTTGCTTTTGCCACGGA 57.265 38.095 0.00 0.00 46.87 4.69
2256 2991 5.866633 TCTAATTATTTTGCTTTTGCCACGG 59.133 36.000 0.00 0.00 46.87 4.94
2257 2992 6.586082 ACTCTAATTATTTTGCTTTTGCCACG 59.414 34.615 0.00 0.00 46.87 4.94
2258 2993 7.148590 CCACTCTAATTATTTTGCTTTTGCCAC 60.149 37.037 0.00 0.00 46.87 5.01
2259 2994 6.873076 CCACTCTAATTATTTTGCTTTTGCCA 59.127 34.615 0.00 0.00 46.87 4.92
2260 2995 6.183360 GCCACTCTAATTATTTTGCTTTTGCC 60.183 38.462 0.00 0.00 46.87 4.52
2262 2997 7.887996 TGCCACTCTAATTATTTTGCTTTTG 57.112 32.000 0.00 0.00 0.00 2.44
2263 2998 9.506018 AATTGCCACTCTAATTATTTTGCTTTT 57.494 25.926 0.00 0.00 0.00 2.27
2264 2999 8.938906 CAATTGCCACTCTAATTATTTTGCTTT 58.061 29.630 0.00 0.00 0.00 3.51
2265 3000 8.313292 TCAATTGCCACTCTAATTATTTTGCTT 58.687 29.630 0.00 0.00 0.00 3.91
2266 3001 7.839907 TCAATTGCCACTCTAATTATTTTGCT 58.160 30.769 0.00 0.00 0.00 3.91
2267 3002 7.975616 TCTCAATTGCCACTCTAATTATTTTGC 59.024 33.333 0.00 0.00 0.00 3.68
2271 3006 9.851686 TGTATCTCAATTGCCACTCTAATTATT 57.148 29.630 0.00 0.00 0.00 1.40
2273 3008 9.276590 CATGTATCTCAATTGCCACTCTAATTA 57.723 33.333 0.00 0.00 0.00 1.40
2274 3009 7.776969 ACATGTATCTCAATTGCCACTCTAATT 59.223 33.333 0.00 0.00 0.00 1.40
2275 3010 7.285566 ACATGTATCTCAATTGCCACTCTAAT 58.714 34.615 0.00 0.00 0.00 1.73
2276 3011 6.653020 ACATGTATCTCAATTGCCACTCTAA 58.347 36.000 0.00 0.00 0.00 2.10
2277 3012 6.127083 TGACATGTATCTCAATTGCCACTCTA 60.127 38.462 0.00 0.00 0.00 2.43
2278 3013 5.108187 ACATGTATCTCAATTGCCACTCT 57.892 39.130 0.00 0.00 0.00 3.24
2279 3014 4.877823 TGACATGTATCTCAATTGCCACTC 59.122 41.667 0.00 0.00 0.00 3.51
2280 3015 4.847198 TGACATGTATCTCAATTGCCACT 58.153 39.130 0.00 0.00 0.00 4.00
2281 3016 5.565592 TTGACATGTATCTCAATTGCCAC 57.434 39.130 0.00 0.00 0.00 5.01
2282 3017 6.016860 GCTATTGACATGTATCTCAATTGCCA 60.017 38.462 22.29 3.21 43.72 4.92
2283 3018 6.376978 GCTATTGACATGTATCTCAATTGCC 58.623 40.000 22.29 11.87 43.72 4.52
2284 3019 7.199541 AGCTATTGACATGTATCTCAATTGC 57.800 36.000 23.93 23.93 46.82 3.56
2287 3022 9.926158 CTCTTAGCTATTGACATGTATCTCAAT 57.074 33.333 13.24 13.24 39.79 2.57
2288 3023 8.918116 ACTCTTAGCTATTGACATGTATCTCAA 58.082 33.333 0.00 0.00 0.00 3.02
2289 3024 8.470657 ACTCTTAGCTATTGACATGTATCTCA 57.529 34.615 0.00 0.00 0.00 3.27
2291 3026 8.519526 GCTACTCTTAGCTATTGACATGTATCT 58.480 37.037 0.00 0.00 46.47 1.98
2292 3027 8.682128 GCTACTCTTAGCTATTGACATGTATC 57.318 38.462 0.00 0.00 46.47 2.24
2307 3042 8.087982 TGTCATTTCACTTTTGCTACTCTTAG 57.912 34.615 0.00 0.00 0.00 2.18
2308 3043 8.445275 TTGTCATTTCACTTTTGCTACTCTTA 57.555 30.769 0.00 0.00 0.00 2.10
2309 3044 6.942532 TGTCATTTCACTTTTGCTACTCTT 57.057 33.333 0.00 0.00 0.00 2.85
2310 3045 6.942532 TTGTCATTTCACTTTTGCTACTCT 57.057 33.333 0.00 0.00 0.00 3.24
2311 3046 8.579682 AATTTGTCATTTCACTTTTGCTACTC 57.420 30.769 0.00 0.00 0.00 2.59
2314 3049 9.340695 CGATAATTTGTCATTTCACTTTTGCTA 57.659 29.630 0.00 0.00 0.00 3.49
2315 3050 7.867403 ACGATAATTTGTCATTTCACTTTTGCT 59.133 29.630 0.00 0.00 0.00 3.91
2316 3051 8.006741 ACGATAATTTGTCATTTCACTTTTGC 57.993 30.769 0.00 0.00 0.00 3.68
2321 3056 8.487176 GCAAAAACGATAATTTGTCATTTCACT 58.513 29.630 0.00 0.00 38.48 3.41
2322 3057 7.739911 GGCAAAAACGATAATTTGTCATTTCAC 59.260 33.333 0.00 0.00 40.08 3.18
2323 3058 7.439356 TGGCAAAAACGATAATTTGTCATTTCA 59.561 29.630 1.77 0.00 43.82 2.69
2324 3059 7.791949 TGGCAAAAACGATAATTTGTCATTTC 58.208 30.769 1.77 0.00 43.82 2.17
2325 3060 7.721286 TGGCAAAAACGATAATTTGTCATTT 57.279 28.000 1.77 0.00 43.82 2.32
2329 3064 5.866633 TCCATGGCAAAAACGATAATTTGTC 59.133 36.000 6.96 0.00 40.59 3.18
2330 3065 5.788450 TCCATGGCAAAAACGATAATTTGT 58.212 33.333 6.96 0.00 38.48 2.83
2331 3066 6.718454 TTCCATGGCAAAAACGATAATTTG 57.282 33.333 6.96 0.00 39.08 2.32
2332 3067 6.315891 CCATTCCATGGCAAAAACGATAATTT 59.684 34.615 6.96 0.00 44.70 1.82
2333 3068 5.816777 CCATTCCATGGCAAAAACGATAATT 59.183 36.000 6.96 0.00 44.70 1.40
2334 3069 5.358922 CCATTCCATGGCAAAAACGATAAT 58.641 37.500 6.96 0.00 44.70 1.28
2335 3070 4.753233 CCATTCCATGGCAAAAACGATAA 58.247 39.130 6.96 0.00 44.70 1.75
2336 3071 4.383850 CCATTCCATGGCAAAAACGATA 57.616 40.909 6.96 0.00 44.70 2.92
2337 3072 3.249986 CCATTCCATGGCAAAAACGAT 57.750 42.857 6.96 0.00 44.70 3.73
2338 3073 2.739885 CCATTCCATGGCAAAAACGA 57.260 45.000 6.96 0.00 44.70 3.85
2348 3083 4.131649 ACATCACAAATGCCATTCCATG 57.868 40.909 0.00 0.00 0.00 3.66
2349 3084 6.126997 ACAATACATCACAAATGCCATTCCAT 60.127 34.615 0.00 0.00 0.00 3.41
2350 3085 5.187381 ACAATACATCACAAATGCCATTCCA 59.813 36.000 0.00 0.00 0.00 3.53
2351 3086 5.663456 ACAATACATCACAAATGCCATTCC 58.337 37.500 0.00 0.00 0.00 3.01
2352 3087 6.331845 TGACAATACATCACAAATGCCATTC 58.668 36.000 0.00 0.00 0.00 2.67
2353 3088 6.283544 TGACAATACATCACAAATGCCATT 57.716 33.333 0.00 0.00 0.00 3.16
2354 3089 5.918426 TGACAATACATCACAAATGCCAT 57.082 34.783 0.00 0.00 0.00 4.40
2355 3090 5.718724 TTGACAATACATCACAAATGCCA 57.281 34.783 0.00 0.00 0.00 4.92
2356 3091 6.646240 ACTTTTGACAATACATCACAAATGCC 59.354 34.615 0.00 0.00 32.69 4.40
2357 3092 7.642071 ACTTTTGACAATACATCACAAATGC 57.358 32.000 0.00 0.00 32.69 3.56
2362 3097 9.337396 ACTCTTAACTTTTGACAATACATCACA 57.663 29.630 0.00 0.00 0.00 3.58
2363 3098 9.599322 CACTCTTAACTTTTGACAATACATCAC 57.401 33.333 0.00 0.00 0.00 3.06
2364 3099 8.783093 CCACTCTTAACTTTTGACAATACATCA 58.217 33.333 0.00 0.00 0.00 3.07
2365 3100 7.750903 GCCACTCTTAACTTTTGACAATACATC 59.249 37.037 0.00 0.00 0.00 3.06
2366 3101 7.230510 TGCCACTCTTAACTTTTGACAATACAT 59.769 33.333 0.00 0.00 0.00 2.29
2367 3102 6.544197 TGCCACTCTTAACTTTTGACAATACA 59.456 34.615 0.00 0.00 0.00 2.29
2368 3103 6.966021 TGCCACTCTTAACTTTTGACAATAC 58.034 36.000 0.00 0.00 0.00 1.89
2369 3104 7.575414 TTGCCACTCTTAACTTTTGACAATA 57.425 32.000 0.00 0.00 0.00 1.90
2370 3105 6.463995 TTGCCACTCTTAACTTTTGACAAT 57.536 33.333 0.00 0.00 0.00 2.71
2371 3106 5.906113 TTGCCACTCTTAACTTTTGACAA 57.094 34.783 0.00 0.00 0.00 3.18
2372 3107 5.906113 TTTGCCACTCTTAACTTTTGACA 57.094 34.783 0.00 0.00 0.00 3.58
2373 3108 7.621102 CATTTTTGCCACTCTTAACTTTTGAC 58.379 34.615 0.00 0.00 0.00 3.18
2374 3109 7.769272 CATTTTTGCCACTCTTAACTTTTGA 57.231 32.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.