Multiple sequence alignment - TraesCS7A01G480700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G480700 chr7A 100.000 3649 0 0 1 3649 672875396 672871748 0.000000e+00 6739
1 TraesCS7A01G480700 chr7A 91.720 314 22 4 3201 3511 505498732 505499044 2.010000e-117 433
2 TraesCS7A01G480700 chr7A 82.013 467 53 13 2756 3208 673012601 673012152 5.760000e-98 368
3 TraesCS7A01G480700 chr7B 95.422 1813 65 8 849 2655 648671043 648669243 0.000000e+00 2872
4 TraesCS7A01G480700 chr7B 83.231 489 39 14 2713 3161 648669227 648668742 3.390000e-110 409
5 TraesCS7A01G480700 chr7D 92.546 1972 102 21 1190 3131 580854266 580852310 0.000000e+00 2785
6 TraesCS7A01G480700 chr7D 91.092 797 67 4 1 795 42797730 42798524 0.000000e+00 1075
7 TraesCS7A01G480700 chr7D 91.150 791 65 3 1 791 556181713 556180928 0.000000e+00 1068
8 TraesCS7A01G480700 chr7D 91.013 790 70 1 1 790 168496940 168497728 0.000000e+00 1064
9 TraesCS7A01G480700 chr7D 92.332 313 23 1 3207 3519 568468326 568468015 9.300000e-121 444
10 TraesCS7A01G480700 chr7D 92.484 306 20 2 3207 3512 637523693 637523995 5.600000e-118 435
11 TraesCS7A01G480700 chr7D 91.615 322 14 5 841 1158 580854804 580854492 2.010000e-117 433
12 TraesCS7A01G480700 chr6A 93.342 796 49 4 1 794 65536086 65536879 0.000000e+00 1173
13 TraesCS7A01G480700 chr1A 93.426 791 50 2 1 790 463815369 463816158 0.000000e+00 1171
14 TraesCS7A01G480700 chr3D 91.058 794 70 1 1 794 566067389 566066597 0.000000e+00 1072
15 TraesCS7A01G480700 chr3D 91.139 790 69 1 1 790 546669846 546669058 0.000000e+00 1070
16 TraesCS7A01G480700 chr3D 93.115 305 21 0 3207 3511 65174357 65174053 7.190000e-122 448
17 TraesCS7A01G480700 chr3D 91.720 314 25 1 3198 3511 481230105 481230417 5.600000e-118 435
18 TraesCS7A01G480700 chr4B 91.035 792 69 2 1 792 180054185 180054974 0.000000e+00 1068
19 TraesCS7A01G480700 chr2B 90.392 791 74 2 1 791 738650291 738649503 0.000000e+00 1038
20 TraesCS7A01G480700 chr1D 92.208 308 24 0 3204 3511 411904890 411905197 1.560000e-118 436
21 TraesCS7A01G480700 chr6B 91.483 317 26 1 3204 3519 18721163 18721479 5.600000e-118 435
22 TraesCS7A01G480700 chr6D 91.909 309 24 1 3204 3511 79244253 79243945 7.240000e-117 431
23 TraesCS7A01G480700 chr4D 91.640 311 25 1 3204 3514 319171102 319170793 2.600000e-116 429


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G480700 chr7A 672871748 672875396 3648 True 6739.0 6739 100.0000 1 3649 1 chr7A.!!$R1 3648
1 TraesCS7A01G480700 chr7B 648668742 648671043 2301 True 1640.5 2872 89.3265 849 3161 2 chr7B.!!$R1 2312
2 TraesCS7A01G480700 chr7D 580852310 580854804 2494 True 1609.0 2785 92.0805 841 3131 2 chr7D.!!$R3 2290
3 TraesCS7A01G480700 chr7D 42797730 42798524 794 False 1075.0 1075 91.0920 1 795 1 chr7D.!!$F1 794
4 TraesCS7A01G480700 chr7D 556180928 556181713 785 True 1068.0 1068 91.1500 1 791 1 chr7D.!!$R1 790
5 TraesCS7A01G480700 chr7D 168496940 168497728 788 False 1064.0 1064 91.0130 1 790 1 chr7D.!!$F2 789
6 TraesCS7A01G480700 chr6A 65536086 65536879 793 False 1173.0 1173 93.3420 1 794 1 chr6A.!!$F1 793
7 TraesCS7A01G480700 chr1A 463815369 463816158 789 False 1171.0 1171 93.4260 1 790 1 chr1A.!!$F1 789
8 TraesCS7A01G480700 chr3D 566066597 566067389 792 True 1072.0 1072 91.0580 1 794 1 chr3D.!!$R3 793
9 TraesCS7A01G480700 chr3D 546669058 546669846 788 True 1070.0 1070 91.1390 1 790 1 chr3D.!!$R2 789
10 TraesCS7A01G480700 chr4B 180054185 180054974 789 False 1068.0 1068 91.0350 1 792 1 chr4B.!!$F1 791
11 TraesCS7A01G480700 chr2B 738649503 738650291 788 True 1038.0 1038 90.3920 1 791 1 chr2B.!!$R1 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 626 0.327591 TGCCATGTCAGTGCCACATA 59.672 50.0 0.0 0.0 32.48 2.29 F
1397 1598 0.108186 TCTGTCCTGCCTACAATGCG 60.108 55.0 0.0 0.0 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2343 2545 0.108138 CTGTCACGATGTCCCTTCCC 60.108 60.0 0.00 0.00 0.00 3.97 R
3211 3464 0.176680 CACTCTTCACCGGATGGAGG 59.823 60.0 9.46 3.15 34.17 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.529325 GAAGTGAGCTATTTTTACAAAAAGGTT 57.471 29.630 6.10 0.74 40.78 3.50
132 133 4.943093 CACACCATCATCACCAACTGAATA 59.057 41.667 0.00 0.00 30.60 1.75
260 261 2.815503 CTGATGTTTGTGTGGCATGAGA 59.184 45.455 0.00 0.00 0.00 3.27
492 494 1.073897 GGTTGCTGGCTCAAGTCCT 59.926 57.895 0.00 0.00 0.00 3.85
515 517 5.446143 TTCCGGCGCATTTTTCATATTAT 57.554 34.783 10.83 0.00 0.00 1.28
624 626 0.327591 TGCCATGTCAGTGCCACATA 59.672 50.000 0.00 0.00 32.48 2.29
648 650 3.691118 GCCATATATTGTGCCATGTCGAT 59.309 43.478 0.00 0.00 0.00 3.59
707 709 8.776680 ATTTACACGTTCATGTCAAGTTTTAC 57.223 30.769 0.00 0.00 33.85 2.01
711 713 6.128117 ACACGTTCATGTCAAGTTTTACAACT 60.128 34.615 0.00 0.00 45.89 3.16
722 724 5.273523 AGTTTTACAACTAATTCGGCGTC 57.726 39.130 6.85 0.00 41.81 5.19
795 797 9.226606 CATCACTGGTGTATTTACCTCTTTTTA 57.773 33.333 0.53 0.00 41.43 1.52
796 798 8.842358 TCACTGGTGTATTTACCTCTTTTTAG 57.158 34.615 0.53 0.00 41.43 1.85
797 799 8.653191 TCACTGGTGTATTTACCTCTTTTTAGA 58.347 33.333 0.53 0.00 41.43 2.10
798 800 9.280174 CACTGGTGTATTTACCTCTTTTTAGAA 57.720 33.333 0.00 0.00 41.43 2.10
799 801 9.503399 ACTGGTGTATTTACCTCTTTTTAGAAG 57.497 33.333 0.00 0.00 41.43 2.85
800 802 9.720769 CTGGTGTATTTACCTCTTTTTAGAAGA 57.279 33.333 0.00 0.00 41.43 2.87
805 807 9.756461 GTATTTACCTCTTTTTAGAAGAAAGCG 57.244 33.333 0.00 0.00 34.80 4.68
806 808 7.797038 TTTACCTCTTTTTAGAAGAAAGCGT 57.203 32.000 0.00 0.00 34.80 5.07
807 809 8.891671 TTTACCTCTTTTTAGAAGAAAGCGTA 57.108 30.769 0.00 0.00 34.80 4.42
808 810 6.782298 ACCTCTTTTTAGAAGAAAGCGTAC 57.218 37.500 0.00 0.00 34.80 3.67
809 811 5.699915 ACCTCTTTTTAGAAGAAAGCGTACC 59.300 40.000 0.00 0.00 34.80 3.34
810 812 5.121925 CCTCTTTTTAGAAGAAAGCGTACCC 59.878 44.000 0.00 0.00 34.80 3.69
811 813 5.861727 TCTTTTTAGAAGAAAGCGTACCCT 58.138 37.500 0.00 0.00 34.80 4.34
812 814 6.293698 TCTTTTTAGAAGAAAGCGTACCCTT 58.706 36.000 0.00 0.00 34.80 3.95
813 815 7.444299 TCTTTTTAGAAGAAAGCGTACCCTTA 58.556 34.615 0.00 0.00 34.80 2.69
814 816 7.933033 TCTTTTTAGAAGAAAGCGTACCCTTAA 59.067 33.333 0.00 0.00 34.80 1.85
815 817 8.625786 TTTTTAGAAGAAAGCGTACCCTTAAT 57.374 30.769 0.00 0.00 0.00 1.40
816 818 8.625786 TTTTAGAAGAAAGCGTACCCTTAATT 57.374 30.769 0.00 0.00 0.00 1.40
817 819 9.723601 TTTTAGAAGAAAGCGTACCCTTAATTA 57.276 29.630 0.00 0.00 0.00 1.40
818 820 8.937634 TTAGAAGAAAGCGTACCCTTAATTAG 57.062 34.615 0.00 0.00 0.00 1.73
819 821 5.816258 AGAAGAAAGCGTACCCTTAATTAGC 59.184 40.000 0.00 0.00 0.00 3.09
820 822 5.093849 AGAAAGCGTACCCTTAATTAGCA 57.906 39.130 0.00 0.00 0.00 3.49
821 823 5.681639 AGAAAGCGTACCCTTAATTAGCAT 58.318 37.500 0.00 0.00 0.00 3.79
822 824 5.758784 AGAAAGCGTACCCTTAATTAGCATC 59.241 40.000 0.00 0.00 0.00 3.91
823 825 4.957684 AGCGTACCCTTAATTAGCATCT 57.042 40.909 0.00 0.00 0.00 2.90
824 826 4.884247 AGCGTACCCTTAATTAGCATCTC 58.116 43.478 0.00 0.00 0.00 2.75
825 827 3.673809 GCGTACCCTTAATTAGCATCTCG 59.326 47.826 0.00 0.00 0.00 4.04
826 828 3.673809 CGTACCCTTAATTAGCATCTCGC 59.326 47.826 0.00 0.00 42.91 5.03
836 838 3.963676 GCATCTCGCTCTCTGTCAT 57.036 52.632 0.00 0.00 37.77 3.06
837 839 1.489574 GCATCTCGCTCTCTGTCATG 58.510 55.000 0.00 0.00 37.77 3.07
838 840 1.202394 GCATCTCGCTCTCTGTCATGT 60.202 52.381 0.00 0.00 37.77 3.21
839 841 2.738000 GCATCTCGCTCTCTGTCATGTT 60.738 50.000 0.00 0.00 37.77 2.71
940 942 0.749454 CGGCCCATCCCTCAGAAAAG 60.749 60.000 0.00 0.00 0.00 2.27
944 946 3.165071 GCCCATCCCTCAGAAAAGAAAA 58.835 45.455 0.00 0.00 0.00 2.29
947 949 4.774200 CCCATCCCTCAGAAAAGAAAACAT 59.226 41.667 0.00 0.00 0.00 2.71
1031 1038 0.760945 ATCCATCCACTCCCCTCGTC 60.761 60.000 0.00 0.00 0.00 4.20
1032 1039 2.435693 CCATCCACTCCCCTCGTCC 61.436 68.421 0.00 0.00 0.00 4.79
1033 1040 1.381872 CATCCACTCCCCTCGTCCT 60.382 63.158 0.00 0.00 0.00 3.85
1034 1041 1.075896 ATCCACTCCCCTCGTCCTC 60.076 63.158 0.00 0.00 0.00 3.71
1035 1042 2.912987 ATCCACTCCCCTCGTCCTCG 62.913 65.000 0.00 0.00 38.55 4.63
1036 1043 2.361357 CACTCCCCTCGTCCTCGT 60.361 66.667 0.00 0.00 38.33 4.18
1037 1044 2.045143 ACTCCCCTCGTCCTCGTC 60.045 66.667 0.00 0.00 38.33 4.20
1164 1171 3.900892 CGCCGCCGTCTCAGGTAT 61.901 66.667 0.00 0.00 0.00 2.73
1221 1422 0.753111 ATGCGGAATCTCCAAAGGCC 60.753 55.000 0.00 0.00 35.91 5.19
1329 1530 3.121030 GCCGTCTGCAATGTCGCT 61.121 61.111 0.00 0.00 40.77 4.93
1357 1558 3.449227 CCGCCGAGCTGGTACTGA 61.449 66.667 0.00 0.00 41.21 3.41
1358 1559 2.786495 CCGCCGAGCTGGTACTGAT 61.786 63.158 0.00 0.00 41.21 2.90
1385 1586 2.225117 CCCAAACCCTCAAATCTGTCCT 60.225 50.000 0.00 0.00 0.00 3.85
1386 1587 2.821969 CCAAACCCTCAAATCTGTCCTG 59.178 50.000 0.00 0.00 0.00 3.86
1389 1590 0.622665 CCCTCAAATCTGTCCTGCCT 59.377 55.000 0.00 0.00 0.00 4.75
1396 1597 2.338577 ATCTGTCCTGCCTACAATGC 57.661 50.000 0.00 0.00 0.00 3.56
1397 1598 0.108186 TCTGTCCTGCCTACAATGCG 60.108 55.000 0.00 0.00 0.00 4.73
1398 1599 1.078497 TGTCCTGCCTACAATGCGG 60.078 57.895 0.00 0.00 34.81 5.69
1400 1601 0.177141 GTCCTGCCTACAATGCGGTA 59.823 55.000 0.00 0.00 33.12 4.02
1404 1605 0.611200 TGCCTACAATGCGGTACTGT 59.389 50.000 3.10 0.00 0.00 3.55
1405 1606 1.002659 TGCCTACAATGCGGTACTGTT 59.997 47.619 3.10 0.00 0.00 3.16
1407 1608 3.264104 GCCTACAATGCGGTACTGTTTA 58.736 45.455 3.10 0.00 0.00 2.01
1408 1609 3.063045 GCCTACAATGCGGTACTGTTTAC 59.937 47.826 3.10 0.00 0.00 2.01
1409 1610 4.501071 CCTACAATGCGGTACTGTTTACT 58.499 43.478 3.10 0.00 0.00 2.24
1410 1611 4.565564 CCTACAATGCGGTACTGTTTACTC 59.434 45.833 3.10 0.00 0.00 2.59
1411 1612 4.267349 ACAATGCGGTACTGTTTACTCT 57.733 40.909 3.10 0.00 0.00 3.24
1412 1613 4.243270 ACAATGCGGTACTGTTTACTCTC 58.757 43.478 3.10 0.00 0.00 3.20
1418 1620 4.326548 GCGGTACTGTTTACTCTCATGTTC 59.673 45.833 3.10 0.00 0.00 3.18
1557 1759 1.080772 GATCGGCGGCGTCATGATA 60.081 57.895 31.06 10.46 0.00 2.15
1632 1834 2.880879 CCGGACATCAGCGTCGTG 60.881 66.667 0.00 0.00 36.73 4.35
2343 2545 2.877691 GCGTTGGCTGCCCTAAAG 59.122 61.111 17.53 8.22 35.83 1.85
2379 2581 4.002797 GTGGAGGACATTGCCACC 57.997 61.111 0.00 6.64 44.86 4.61
2385 2587 0.038166 AGGACATTGCCACCGTGATT 59.962 50.000 0.00 0.00 0.00 2.57
2485 2687 8.734386 AGTTTTATGAAGTCTTTGGCTAGATTG 58.266 33.333 0.00 0.00 0.00 2.67
2515 2717 6.147821 CGAGGTAAATGTTTCTCTGTCACAAT 59.852 38.462 0.00 0.00 0.00 2.71
2525 2727 3.578282 TCTCTGTCACAATGTAAGGCAGA 59.422 43.478 7.61 7.61 0.00 4.26
2614 2816 6.741992 TCTGCATTGTATAGAAAACAGTGG 57.258 37.500 12.23 0.00 35.71 4.00
2681 2883 3.820557 TGGGCTCATATTAGCACTTTCC 58.179 45.455 12.25 3.86 46.51 3.13
2684 2886 2.808543 GCTCATATTAGCACTTTCCCCG 59.191 50.000 3.96 0.00 42.30 5.73
2685 2887 3.494398 GCTCATATTAGCACTTTCCCCGA 60.494 47.826 3.96 0.00 42.30 5.14
2687 2889 2.994186 TATTAGCACTTTCCCCGACC 57.006 50.000 0.00 0.00 0.00 4.79
2689 2891 0.323629 TTAGCACTTTCCCCGACCTG 59.676 55.000 0.00 0.00 0.00 4.00
2690 2892 0.834687 TAGCACTTTCCCCGACCTGT 60.835 55.000 0.00 0.00 0.00 4.00
2691 2893 1.671379 GCACTTTCCCCGACCTGTC 60.671 63.158 0.00 0.00 0.00 3.51
2692 2894 2.058675 CACTTTCCCCGACCTGTCT 58.941 57.895 0.00 0.00 0.00 3.41
2694 2896 0.685660 ACTTTCCCCGACCTGTCTTC 59.314 55.000 0.00 0.00 0.00 2.87
2695 2897 0.389948 CTTTCCCCGACCTGTCTTCG 60.390 60.000 0.00 0.00 36.20 3.79
2696 2898 1.117142 TTTCCCCGACCTGTCTTCGT 61.117 55.000 0.00 0.00 34.56 3.85
2697 2899 1.812686 TTCCCCGACCTGTCTTCGTG 61.813 60.000 0.00 0.00 34.56 4.35
2698 2900 2.432628 CCCGACCTGTCTTCGTGC 60.433 66.667 0.00 0.00 34.56 5.34
2699 2901 2.432628 CCGACCTGTCTTCGTGCC 60.433 66.667 0.00 0.00 34.56 5.01
2700 2902 2.432628 CGACCTGTCTTCGTGCCC 60.433 66.667 0.00 0.00 0.00 5.36
2701 2903 2.047179 GACCTGTCTTCGTGCCCC 60.047 66.667 0.00 0.00 0.00 5.80
2702 2904 2.526873 ACCTGTCTTCGTGCCCCT 60.527 61.111 0.00 0.00 0.00 4.79
2703 2905 2.046892 CCTGTCTTCGTGCCCCTG 60.047 66.667 0.00 0.00 0.00 4.45
2704 2906 2.743928 CTGTCTTCGTGCCCCTGC 60.744 66.667 0.00 0.00 38.26 4.85
2705 2907 3.241530 TGTCTTCGTGCCCCTGCT 61.242 61.111 0.00 0.00 38.71 4.24
2706 2908 2.435059 GTCTTCGTGCCCCTGCTC 60.435 66.667 0.00 0.00 38.71 4.26
2709 2911 2.922503 TTCGTGCCCCTGCTCAGA 60.923 61.111 0.00 0.00 38.71 3.27
2710 2912 3.240134 TTCGTGCCCCTGCTCAGAC 62.240 63.158 0.00 0.00 38.71 3.51
2711 2913 4.767255 CGTGCCCCTGCTCAGACC 62.767 72.222 0.00 0.00 38.71 3.85
2712 2914 3.640407 GTGCCCCTGCTCAGACCA 61.640 66.667 0.00 0.00 38.71 4.02
2715 2917 1.000396 GCCCCTGCTCAGACCAAAT 60.000 57.895 0.00 0.00 33.53 2.32
2734 2936 3.279116 TGCACTTGTGCAGCCGTC 61.279 61.111 22.47 0.00 40.23 4.79
2739 2941 2.031919 TTGTGCAGCCGTCGGAAT 59.968 55.556 17.49 0.00 0.00 3.01
2751 2953 2.167075 CCGTCGGAATAGTACCCTGTTT 59.833 50.000 4.91 0.00 0.00 2.83
2768 2970 4.155644 CCTGTTTTCTCAAGGAGCTGAATC 59.844 45.833 0.00 0.00 0.00 2.52
2795 2997 4.064768 CCCCAGGCCCAAGCATCA 62.065 66.667 0.00 0.00 42.56 3.07
2800 3002 2.443390 GGCCCAAGCATCAGCCAT 60.443 61.111 0.00 0.00 45.07 4.40
2803 3005 1.813859 CCCAAGCATCAGCCATGTG 59.186 57.895 0.00 0.00 43.56 3.21
2891 3098 5.798132 ACAGCAAGTCTGAATCTGAATGTA 58.202 37.500 1.52 0.00 45.72 2.29
2898 3105 9.551734 CAAGTCTGAATCTGAATGTATCCATTA 57.448 33.333 0.00 0.00 41.37 1.90
2912 3119 7.878547 TGTATCCATTACATCATTTGCTTGA 57.121 32.000 0.00 0.00 35.86 3.02
2913 3120 7.706159 TGTATCCATTACATCATTTGCTTGAC 58.294 34.615 0.00 0.00 35.86 3.18
2914 3121 6.778834 ATCCATTACATCATTTGCTTGACA 57.221 33.333 0.00 0.00 0.00 3.58
2915 3122 6.198650 TCCATTACATCATTTGCTTGACAG 57.801 37.500 0.00 0.00 0.00 3.51
2917 3124 4.439305 TTACATCATTTGCTTGACAGCC 57.561 40.909 0.00 0.00 46.74 4.85
2951 3187 9.643693 ATTTTCGTGCATCAGAAATAGAAATTT 57.356 25.926 13.21 0.00 38.03 1.82
2994 3234 1.879380 TGCATTGAACTAGTGGTGTGC 59.121 47.619 13.55 13.55 0.00 4.57
2995 3235 1.135972 GCATTGAACTAGTGGTGTGCG 60.136 52.381 0.00 0.00 0.00 5.34
2996 3236 2.143122 CATTGAACTAGTGGTGTGCGT 58.857 47.619 0.00 0.00 0.00 5.24
2997 3237 1.577468 TTGAACTAGTGGTGTGCGTG 58.423 50.000 0.00 0.00 0.00 5.34
3024 3266 2.879907 CTGCCATGGAAAGTGCCG 59.120 61.111 18.40 0.00 0.00 5.69
3043 3285 5.637387 GTGCCGAACATTTGGTTAATTCAAT 59.363 36.000 0.00 0.00 40.63 2.57
3057 3299 9.733556 TGGTTAATTCAATCTCTGTTAAGCTAA 57.266 29.630 0.00 0.00 35.16 3.09
3095 3347 3.525862 AGAGGATGTCTTCCCAGTCTTT 58.474 45.455 1.13 0.00 46.81 2.52
3102 3354 2.810852 GTCTTCCCAGTCTTTTGAGCAG 59.189 50.000 0.00 0.00 0.00 4.24
3122 3374 5.571357 AGCAGTTTTGTGTTAAAACTTGTCG 59.429 36.000 13.37 5.79 45.20 4.35
3141 3393 5.806286 TGTCGAACAAAAGAATGAACACTC 58.194 37.500 0.00 0.00 0.00 3.51
3142 3394 5.205565 GTCGAACAAAAGAATGAACACTCC 58.794 41.667 0.00 0.00 0.00 3.85
3145 3398 5.853282 CGAACAAAAGAATGAACACTCCATC 59.147 40.000 0.00 0.00 0.00 3.51
3161 3414 1.376424 ATCCACAAGCACAGCTCGG 60.376 57.895 0.00 0.00 38.25 4.63
3162 3415 2.116983 ATCCACAAGCACAGCTCGGT 62.117 55.000 0.00 0.00 38.25 4.69
3163 3416 2.610694 CCACAAGCACAGCTCGGTG 61.611 63.158 13.54 13.54 38.25 4.94
3164 3417 1.595109 CACAAGCACAGCTCGGTGA 60.595 57.895 14.72 0.00 42.44 4.02
3165 3418 1.146041 ACAAGCACAGCTCGGTGAA 59.854 52.632 8.31 0.00 41.32 3.18
3166 3419 0.882042 ACAAGCACAGCTCGGTGAAG 60.882 55.000 8.31 0.12 41.32 3.02
3167 3420 0.882042 CAAGCACAGCTCGGTGAAGT 60.882 55.000 8.31 0.00 41.32 3.01
3168 3421 0.179045 AAGCACAGCTCGGTGAAGTT 60.179 50.000 8.31 0.00 41.32 2.66
3169 3422 0.601311 AGCACAGCTCGGTGAAGTTC 60.601 55.000 8.31 0.00 41.32 3.01
3170 3423 0.601311 GCACAGCTCGGTGAAGTTCT 60.601 55.000 8.31 0.00 41.32 3.01
3171 3424 1.143305 CACAGCTCGGTGAAGTTCTG 58.857 55.000 4.17 0.00 41.32 3.02
3172 3425 0.753262 ACAGCTCGGTGAAGTTCTGT 59.247 50.000 4.17 0.00 0.00 3.41
3173 3426 1.139058 ACAGCTCGGTGAAGTTCTGTT 59.861 47.619 4.17 0.00 31.51 3.16
3174 3427 2.364324 ACAGCTCGGTGAAGTTCTGTTA 59.636 45.455 4.17 0.00 31.51 2.41
3175 3428 3.006967 ACAGCTCGGTGAAGTTCTGTTAT 59.993 43.478 4.17 0.00 31.51 1.89
3176 3429 3.997021 CAGCTCGGTGAAGTTCTGTTATT 59.003 43.478 4.17 0.00 0.00 1.40
3177 3430 3.997021 AGCTCGGTGAAGTTCTGTTATTG 59.003 43.478 4.17 0.00 0.00 1.90
3178 3431 3.125316 GCTCGGTGAAGTTCTGTTATTGG 59.875 47.826 4.17 0.00 0.00 3.16
3179 3432 3.071479 TCGGTGAAGTTCTGTTATTGGC 58.929 45.455 4.17 0.00 0.00 4.52
3180 3433 2.811431 CGGTGAAGTTCTGTTATTGGCA 59.189 45.455 4.17 0.00 0.00 4.92
3181 3434 3.440173 CGGTGAAGTTCTGTTATTGGCAT 59.560 43.478 4.17 0.00 0.00 4.40
3182 3435 4.082787 CGGTGAAGTTCTGTTATTGGCATT 60.083 41.667 4.17 0.00 0.00 3.56
3183 3436 5.123186 CGGTGAAGTTCTGTTATTGGCATTA 59.877 40.000 4.17 0.00 0.00 1.90
3184 3437 6.183360 CGGTGAAGTTCTGTTATTGGCATTAT 60.183 38.462 4.17 0.00 0.00 1.28
3185 3438 7.547227 GGTGAAGTTCTGTTATTGGCATTATT 58.453 34.615 4.17 0.00 0.00 1.40
3186 3439 8.682710 GGTGAAGTTCTGTTATTGGCATTATTA 58.317 33.333 4.17 0.00 0.00 0.98
3187 3440 9.503427 GTGAAGTTCTGTTATTGGCATTATTAC 57.497 33.333 4.17 0.00 0.00 1.89
3188 3441 8.682710 TGAAGTTCTGTTATTGGCATTATTACC 58.317 33.333 4.17 0.00 0.00 2.85
3189 3442 8.823220 AAGTTCTGTTATTGGCATTATTACCT 57.177 30.769 0.00 0.00 0.00 3.08
3190 3443 9.914834 AAGTTCTGTTATTGGCATTATTACCTA 57.085 29.630 0.00 0.00 0.00 3.08
3191 3444 9.338622 AGTTCTGTTATTGGCATTATTACCTAC 57.661 33.333 0.00 0.00 0.00 3.18
3192 3445 9.338622 GTTCTGTTATTGGCATTATTACCTACT 57.661 33.333 0.00 0.00 0.00 2.57
3193 3446 9.914834 TTCTGTTATTGGCATTATTACCTACTT 57.085 29.630 0.00 0.00 0.00 2.24
3194 3447 9.914834 TCTGTTATTGGCATTATTACCTACTTT 57.085 29.630 0.00 0.00 0.00 2.66
3211 3464 8.788325 ACCTACTTTAAAACATGACATACTCC 57.212 34.615 0.00 0.00 0.00 3.85
3212 3465 7.827729 ACCTACTTTAAAACATGACATACTCCC 59.172 37.037 0.00 0.00 0.00 4.30
3213 3466 8.047310 CCTACTTTAAAACATGACATACTCCCT 58.953 37.037 0.00 0.00 0.00 4.20
3214 3467 7.923414 ACTTTAAAACATGACATACTCCCTC 57.077 36.000 0.00 0.00 0.00 4.30
3215 3468 6.884836 ACTTTAAAACATGACATACTCCCTCC 59.115 38.462 0.00 0.00 0.00 4.30
3216 3469 4.927267 AAAACATGACATACTCCCTCCA 57.073 40.909 0.00 0.00 0.00 3.86
3217 3470 5.456921 AAAACATGACATACTCCCTCCAT 57.543 39.130 0.00 0.00 0.00 3.41
3218 3471 4.696479 AACATGACATACTCCCTCCATC 57.304 45.455 0.00 0.00 0.00 3.51
3219 3472 2.975489 ACATGACATACTCCCTCCATCC 59.025 50.000 0.00 0.00 0.00 3.51
3220 3473 1.704641 TGACATACTCCCTCCATCCG 58.295 55.000 0.00 0.00 0.00 4.18
3221 3474 0.969894 GACATACTCCCTCCATCCGG 59.030 60.000 0.00 0.00 0.00 5.14
3222 3475 0.264955 ACATACTCCCTCCATCCGGT 59.735 55.000 0.00 0.00 0.00 5.28
3223 3476 0.681733 CATACTCCCTCCATCCGGTG 59.318 60.000 0.00 0.00 0.00 4.94
3224 3477 0.561184 ATACTCCCTCCATCCGGTGA 59.439 55.000 0.00 0.00 0.00 4.02
3225 3478 0.337082 TACTCCCTCCATCCGGTGAA 59.663 55.000 0.00 0.00 0.00 3.18
3226 3479 0.978146 ACTCCCTCCATCCGGTGAAG 60.978 60.000 0.00 0.00 0.00 3.02
3227 3480 0.687757 CTCCCTCCATCCGGTGAAGA 60.688 60.000 0.00 0.00 0.00 2.87
3228 3481 0.687757 TCCCTCCATCCGGTGAAGAG 60.688 60.000 0.00 3.95 0.00 2.85
3229 3482 0.978146 CCCTCCATCCGGTGAAGAGT 60.978 60.000 0.00 0.00 0.00 3.24
3230 3483 0.176680 CCTCCATCCGGTGAAGAGTG 59.823 60.000 0.00 0.00 0.00 3.51
3231 3484 0.898320 CTCCATCCGGTGAAGAGTGT 59.102 55.000 0.00 0.00 0.00 3.55
3232 3485 2.100197 CTCCATCCGGTGAAGAGTGTA 58.900 52.381 0.00 0.00 0.00 2.90
3233 3486 1.822990 TCCATCCGGTGAAGAGTGTAC 59.177 52.381 0.00 0.00 0.00 2.90
3234 3487 1.548719 CCATCCGGTGAAGAGTGTACA 59.451 52.381 0.00 0.00 0.00 2.90
3235 3488 2.168521 CCATCCGGTGAAGAGTGTACAT 59.831 50.000 0.00 0.00 0.00 2.29
3236 3489 3.448686 CATCCGGTGAAGAGTGTACATC 58.551 50.000 0.00 0.00 0.00 3.06
3237 3490 2.803956 TCCGGTGAAGAGTGTACATCT 58.196 47.619 0.00 0.27 0.00 2.90
3238 3491 3.959293 TCCGGTGAAGAGTGTACATCTA 58.041 45.455 0.00 0.00 0.00 1.98
3239 3492 3.945921 TCCGGTGAAGAGTGTACATCTAG 59.054 47.826 0.00 0.00 0.00 2.43
3240 3493 3.489398 CCGGTGAAGAGTGTACATCTAGC 60.489 52.174 0.00 0.00 0.00 3.42
3241 3494 3.378742 CGGTGAAGAGTGTACATCTAGCT 59.621 47.826 0.00 0.00 0.00 3.32
3242 3495 4.142359 CGGTGAAGAGTGTACATCTAGCTT 60.142 45.833 0.00 0.00 0.00 3.74
3243 3496 5.344884 GGTGAAGAGTGTACATCTAGCTTC 58.655 45.833 0.00 8.64 0.00 3.86
3244 3497 5.344884 GTGAAGAGTGTACATCTAGCTTCC 58.655 45.833 0.00 0.48 31.71 3.46
3245 3498 5.016831 TGAAGAGTGTACATCTAGCTTCCA 58.983 41.667 0.00 0.00 31.71 3.53
3246 3499 5.480422 TGAAGAGTGTACATCTAGCTTCCAA 59.520 40.000 0.00 0.00 31.71 3.53
3247 3500 6.014584 TGAAGAGTGTACATCTAGCTTCCAAA 60.015 38.462 0.00 0.00 31.71 3.28
3248 3501 6.552445 AGAGTGTACATCTAGCTTCCAAAT 57.448 37.500 0.00 0.00 0.00 2.32
3249 3502 6.951971 AGAGTGTACATCTAGCTTCCAAATT 58.048 36.000 0.00 0.00 0.00 1.82
3250 3503 7.398024 AGAGTGTACATCTAGCTTCCAAATTT 58.602 34.615 0.00 0.00 0.00 1.82
3251 3504 7.335422 AGAGTGTACATCTAGCTTCCAAATTTG 59.665 37.037 11.40 11.40 0.00 2.32
3252 3505 6.942576 AGTGTACATCTAGCTTCCAAATTTGT 59.057 34.615 16.73 0.66 0.00 2.83
3253 3506 7.119846 AGTGTACATCTAGCTTCCAAATTTGTC 59.880 37.037 16.73 3.64 0.00 3.18
3254 3507 5.904362 ACATCTAGCTTCCAAATTTGTCC 57.096 39.130 16.73 2.58 0.00 4.02
3255 3508 5.324409 ACATCTAGCTTCCAAATTTGTCCA 58.676 37.500 16.73 0.00 0.00 4.02
3256 3509 5.183904 ACATCTAGCTTCCAAATTTGTCCAC 59.816 40.000 16.73 4.24 0.00 4.02
3257 3510 4.724399 TCTAGCTTCCAAATTTGTCCACA 58.276 39.130 16.73 0.00 0.00 4.17
3258 3511 5.136828 TCTAGCTTCCAAATTTGTCCACAA 58.863 37.500 16.73 1.53 0.00 3.33
3271 3524 6.431198 TTTGTCCACAAAAGAGTGTACTTC 57.569 37.500 2.29 0.00 42.26 3.01
3272 3525 5.353394 TGTCCACAAAAGAGTGTACTTCT 57.647 39.130 0.00 0.00 37.82 2.85
3273 3526 6.474140 TGTCCACAAAAGAGTGTACTTCTA 57.526 37.500 0.00 0.00 37.82 2.10
3274 3527 7.062749 TGTCCACAAAAGAGTGTACTTCTAT 57.937 36.000 0.00 0.00 37.82 1.98
3275 3528 7.152645 TGTCCACAAAAGAGTGTACTTCTATC 58.847 38.462 0.00 0.00 37.82 2.08
3276 3529 7.015292 TGTCCACAAAAGAGTGTACTTCTATCT 59.985 37.037 0.00 0.00 37.82 1.98
3277 3530 7.873505 GTCCACAAAAGAGTGTACTTCTATCTT 59.126 37.037 0.00 0.00 37.82 2.40
3278 3531 8.088981 TCCACAAAAGAGTGTACTTCTATCTTC 58.911 37.037 0.00 0.00 37.82 2.87
3279 3532 7.332182 CCACAAAAGAGTGTACTTCTATCTTCC 59.668 40.741 0.00 0.00 37.82 3.46
3280 3533 7.332182 CACAAAAGAGTGTACTTCTATCTTCCC 59.668 40.741 0.00 0.00 34.83 3.97
3281 3534 7.016268 ACAAAAGAGTGTACTTCTATCTTCCCA 59.984 37.037 0.00 0.00 30.16 4.37
3282 3535 7.554959 AAAGAGTGTACTTCTATCTTCCCAA 57.445 36.000 0.00 0.00 30.16 4.12
3283 3536 7.741554 AAGAGTGTACTTCTATCTTCCCAAT 57.258 36.000 0.00 0.00 0.00 3.16
3284 3537 7.118496 AGAGTGTACTTCTATCTTCCCAATG 57.882 40.000 0.00 0.00 0.00 2.82
3285 3538 5.675538 AGTGTACTTCTATCTTCCCAATGC 58.324 41.667 0.00 0.00 0.00 3.56
3286 3539 5.189736 AGTGTACTTCTATCTTCCCAATGCA 59.810 40.000 0.00 0.00 0.00 3.96
3287 3540 6.058183 GTGTACTTCTATCTTCCCAATGCAT 58.942 40.000 0.00 0.00 0.00 3.96
3288 3541 6.543831 GTGTACTTCTATCTTCCCAATGCATT 59.456 38.462 5.99 5.99 0.00 3.56
3289 3542 7.067494 GTGTACTTCTATCTTCCCAATGCATTT 59.933 37.037 9.83 0.00 0.00 2.32
3290 3543 7.615365 TGTACTTCTATCTTCCCAATGCATTTT 59.385 33.333 9.83 0.00 0.00 1.82
3291 3544 6.870769 ACTTCTATCTTCCCAATGCATTTTG 58.129 36.000 9.83 3.82 0.00 2.44
3292 3545 6.664816 ACTTCTATCTTCCCAATGCATTTTGA 59.335 34.615 9.83 6.37 0.00 2.69
3293 3546 7.178983 ACTTCTATCTTCCCAATGCATTTTGAA 59.821 33.333 9.83 13.71 0.00 2.69
3294 3547 7.479352 TCTATCTTCCCAATGCATTTTGAAA 57.521 32.000 9.83 7.01 0.00 2.69
3295 3548 8.081517 TCTATCTTCCCAATGCATTTTGAAAT 57.918 30.769 9.83 12.49 0.00 2.17
3296 3549 9.199645 TCTATCTTCCCAATGCATTTTGAAATA 57.800 29.630 9.83 12.85 0.00 1.40
3297 3550 9.472361 CTATCTTCCCAATGCATTTTGAAATAG 57.528 33.333 9.83 16.83 0.00 1.73
3298 3551 7.479352 TCTTCCCAATGCATTTTGAAATAGA 57.521 32.000 9.83 6.49 0.00 1.98
3299 3552 7.905265 TCTTCCCAATGCATTTTGAAATAGAA 58.095 30.769 9.83 3.63 0.00 2.10
3300 3553 8.373981 TCTTCCCAATGCATTTTGAAATAGAAA 58.626 29.630 9.83 0.00 0.00 2.52
3301 3554 8.915057 TTCCCAATGCATTTTGAAATAGAAAA 57.085 26.923 9.83 0.00 0.00 2.29
3302 3555 8.915057 TCCCAATGCATTTTGAAATAGAAAAA 57.085 26.923 9.83 0.00 0.00 1.94
3324 3577 5.409643 AAAAACTTCTGTCTCATCACACG 57.590 39.130 0.00 0.00 0.00 4.49
3325 3578 2.732412 ACTTCTGTCTCATCACACGG 57.268 50.000 0.00 0.00 0.00 4.94
3326 3579 1.964223 ACTTCTGTCTCATCACACGGT 59.036 47.619 0.00 0.00 0.00 4.83
3327 3580 3.154710 ACTTCTGTCTCATCACACGGTA 58.845 45.455 0.00 0.00 0.00 4.02
3328 3581 3.572682 ACTTCTGTCTCATCACACGGTAA 59.427 43.478 0.00 0.00 0.00 2.85
3329 3582 4.220821 ACTTCTGTCTCATCACACGGTAAT 59.779 41.667 0.00 0.00 0.00 1.89
3330 3583 4.371855 TCTGTCTCATCACACGGTAATC 57.628 45.455 0.00 0.00 0.00 1.75
3331 3584 3.761752 TCTGTCTCATCACACGGTAATCA 59.238 43.478 0.00 0.00 0.00 2.57
3332 3585 4.219725 TCTGTCTCATCACACGGTAATCAA 59.780 41.667 0.00 0.00 0.00 2.57
3333 3586 4.494484 TGTCTCATCACACGGTAATCAAG 58.506 43.478 0.00 0.00 0.00 3.02
3334 3587 4.219725 TGTCTCATCACACGGTAATCAAGA 59.780 41.667 0.00 0.00 0.00 3.02
3335 3588 5.105351 TGTCTCATCACACGGTAATCAAGAT 60.105 40.000 0.00 0.00 0.00 2.40
3336 3589 5.460419 GTCTCATCACACGGTAATCAAGATC 59.540 44.000 0.00 0.00 0.00 2.75
3337 3590 5.127031 TCTCATCACACGGTAATCAAGATCA 59.873 40.000 0.00 0.00 0.00 2.92
3338 3591 5.729510 TCATCACACGGTAATCAAGATCAA 58.270 37.500 0.00 0.00 0.00 2.57
3339 3592 6.348498 TCATCACACGGTAATCAAGATCAAT 58.652 36.000 0.00 0.00 0.00 2.57
3340 3593 7.496747 TCATCACACGGTAATCAAGATCAATA 58.503 34.615 0.00 0.00 0.00 1.90
3341 3594 7.653311 TCATCACACGGTAATCAAGATCAATAG 59.347 37.037 0.00 0.00 0.00 1.73
3342 3595 5.753438 TCACACGGTAATCAAGATCAATAGC 59.247 40.000 0.00 0.00 0.00 2.97
3343 3596 5.523552 CACACGGTAATCAAGATCAATAGCA 59.476 40.000 0.00 0.00 0.00 3.49
3344 3597 6.037062 CACACGGTAATCAAGATCAATAGCAA 59.963 38.462 0.00 0.00 0.00 3.91
3345 3598 6.767902 ACACGGTAATCAAGATCAATAGCAAT 59.232 34.615 0.00 0.00 0.00 3.56
3346 3599 7.041780 ACACGGTAATCAAGATCAATAGCAATC 60.042 37.037 0.00 0.00 0.00 2.67
3347 3600 7.172190 CACGGTAATCAAGATCAATAGCAATCT 59.828 37.037 0.00 0.00 33.67 2.40
3348 3601 8.367911 ACGGTAATCAAGATCAATAGCAATCTA 58.632 33.333 0.00 0.00 32.01 1.98
3349 3602 8.651588 CGGTAATCAAGATCAATAGCAATCTAC 58.348 37.037 0.00 0.00 32.01 2.59
3350 3603 9.494271 GGTAATCAAGATCAATAGCAATCTACA 57.506 33.333 0.00 0.00 32.01 2.74
3352 3605 8.969260 AATCAAGATCAATAGCAATCTACACA 57.031 30.769 0.00 0.00 32.01 3.72
3353 3606 9.570468 AATCAAGATCAATAGCAATCTACACAT 57.430 29.630 0.00 0.00 32.01 3.21
3354 3607 8.374327 TCAAGATCAATAGCAATCTACACATG 57.626 34.615 0.00 0.00 32.01 3.21
3355 3608 7.989170 TCAAGATCAATAGCAATCTACACATGT 59.011 33.333 0.00 0.00 32.01 3.21
3356 3609 8.618677 CAAGATCAATAGCAATCTACACATGTT 58.381 33.333 0.00 0.00 32.01 2.71
3357 3610 8.375608 AGATCAATAGCAATCTACACATGTTC 57.624 34.615 0.00 0.00 30.50 3.18
3358 3611 6.925610 TCAATAGCAATCTACACATGTTCC 57.074 37.500 0.00 0.00 0.00 3.62
3359 3612 6.653020 TCAATAGCAATCTACACATGTTCCT 58.347 36.000 0.00 0.00 0.00 3.36
3360 3613 6.763135 TCAATAGCAATCTACACATGTTCCTC 59.237 38.462 0.00 0.00 0.00 3.71
3361 3614 4.833478 AGCAATCTACACATGTTCCTCT 57.167 40.909 0.00 0.00 0.00 3.69
3362 3615 5.171339 AGCAATCTACACATGTTCCTCTT 57.829 39.130 0.00 0.00 0.00 2.85
3363 3616 6.299805 AGCAATCTACACATGTTCCTCTTA 57.700 37.500 0.00 0.00 0.00 2.10
3364 3617 6.711277 AGCAATCTACACATGTTCCTCTTAA 58.289 36.000 0.00 0.00 0.00 1.85
3365 3618 7.341805 AGCAATCTACACATGTTCCTCTTAAT 58.658 34.615 0.00 0.00 0.00 1.40
3366 3619 7.831193 AGCAATCTACACATGTTCCTCTTAATT 59.169 33.333 0.00 0.00 0.00 1.40
3367 3620 8.462016 GCAATCTACACATGTTCCTCTTAATTT 58.538 33.333 0.00 0.00 0.00 1.82
3368 3621 9.994432 CAATCTACACATGTTCCTCTTAATTTC 57.006 33.333 0.00 0.00 0.00 2.17
3369 3622 9.965902 AATCTACACATGTTCCTCTTAATTTCT 57.034 29.630 0.00 0.00 0.00 2.52
3371 3624 9.871238 TCTACACATGTTCCTCTTAATTTCTAC 57.129 33.333 0.00 0.00 0.00 2.59
3372 3625 9.653287 CTACACATGTTCCTCTTAATTTCTACA 57.347 33.333 0.00 0.00 0.00 2.74
3374 3627 8.950210 ACACATGTTCCTCTTAATTTCTACATG 58.050 33.333 0.00 0.00 44.26 3.21
3375 3628 7.912250 CACATGTTCCTCTTAATTTCTACATGC 59.088 37.037 0.00 0.00 43.14 4.06
3376 3629 6.662414 TGTTCCTCTTAATTTCTACATGCG 57.338 37.500 0.00 0.00 0.00 4.73
3377 3630 5.064707 TGTTCCTCTTAATTTCTACATGCGC 59.935 40.000 0.00 0.00 0.00 6.09
3378 3631 5.023533 TCCTCTTAATTTCTACATGCGCT 57.976 39.130 9.73 0.00 0.00 5.92
3379 3632 5.428253 TCCTCTTAATTTCTACATGCGCTT 58.572 37.500 9.73 0.00 0.00 4.68
3380 3633 6.578944 TCCTCTTAATTTCTACATGCGCTTA 58.421 36.000 9.73 0.00 0.00 3.09
3381 3634 6.701841 TCCTCTTAATTTCTACATGCGCTTAG 59.298 38.462 9.73 6.95 0.00 2.18
3392 3645 2.315246 GCGCTTAGCTCATTGGAGG 58.685 57.895 0.00 0.00 44.04 4.30
3400 3653 2.507407 GCTCATTGGAGGTTGGGTAA 57.493 50.000 0.00 0.00 41.67 2.85
3401 3654 3.018423 GCTCATTGGAGGTTGGGTAAT 57.982 47.619 0.00 0.00 41.67 1.89
3402 3655 3.365472 GCTCATTGGAGGTTGGGTAATT 58.635 45.455 0.00 0.00 41.67 1.40
3403 3656 4.532834 GCTCATTGGAGGTTGGGTAATTA 58.467 43.478 0.00 0.00 41.67 1.40
3404 3657 4.953579 GCTCATTGGAGGTTGGGTAATTAA 59.046 41.667 0.00 0.00 41.67 1.40
3405 3658 5.420739 GCTCATTGGAGGTTGGGTAATTAAA 59.579 40.000 0.00 0.00 41.67 1.52
3406 3659 6.405842 GCTCATTGGAGGTTGGGTAATTAAAG 60.406 42.308 0.00 0.00 41.67 1.85
3407 3660 6.795590 TCATTGGAGGTTGGGTAATTAAAGA 58.204 36.000 0.00 0.00 0.00 2.52
3408 3661 6.889722 TCATTGGAGGTTGGGTAATTAAAGAG 59.110 38.462 0.00 0.00 0.00 2.85
3409 3662 5.187621 TGGAGGTTGGGTAATTAAAGAGG 57.812 43.478 0.00 0.00 0.00 3.69
3410 3663 4.853276 TGGAGGTTGGGTAATTAAAGAGGA 59.147 41.667 0.00 0.00 0.00 3.71
3411 3664 5.045140 TGGAGGTTGGGTAATTAAAGAGGAG 60.045 44.000 0.00 0.00 0.00 3.69
3412 3665 5.191124 GGAGGTTGGGTAATTAAAGAGGAGA 59.809 44.000 0.00 0.00 0.00 3.71
3413 3666 6.063496 AGGTTGGGTAATTAAAGAGGAGAC 57.937 41.667 0.00 0.00 0.00 3.36
3414 3667 5.550403 AGGTTGGGTAATTAAAGAGGAGACA 59.450 40.000 0.00 0.00 0.00 3.41
3415 3668 5.880887 GGTTGGGTAATTAAAGAGGAGACAG 59.119 44.000 0.00 0.00 0.00 3.51
3416 3669 6.296259 GGTTGGGTAATTAAAGAGGAGACAGA 60.296 42.308 0.00 0.00 0.00 3.41
3417 3670 7.339482 GTTGGGTAATTAAAGAGGAGACAGAT 58.661 38.462 0.00 0.00 0.00 2.90
3418 3671 6.889198 TGGGTAATTAAAGAGGAGACAGATG 58.111 40.000 0.00 0.00 0.00 2.90
3419 3672 6.126768 TGGGTAATTAAAGAGGAGACAGATGG 60.127 42.308 0.00 0.00 0.00 3.51
3420 3673 6.126739 GGGTAATTAAAGAGGAGACAGATGGT 60.127 42.308 0.00 0.00 0.00 3.55
3421 3674 6.763610 GGTAATTAAAGAGGAGACAGATGGTG 59.236 42.308 0.00 0.00 0.00 4.17
3422 3675 4.826274 TTAAAGAGGAGACAGATGGTGG 57.174 45.455 0.00 0.00 0.00 4.61
3423 3676 0.908198 AAGAGGAGACAGATGGTGGC 59.092 55.000 0.00 0.00 0.00 5.01
3425 3678 0.908198 GAGGAGACAGATGGTGGCTT 59.092 55.000 0.00 0.00 45.31 4.35
3426 3679 0.617413 AGGAGACAGATGGTGGCTTG 59.383 55.000 0.00 0.00 45.31 4.01
3427 3680 1.028868 GGAGACAGATGGTGGCTTGC 61.029 60.000 0.00 0.00 45.31 4.01
3428 3681 1.364626 GAGACAGATGGTGGCTTGCG 61.365 60.000 0.00 0.00 45.31 4.85
3429 3682 3.044059 GACAGATGGTGGCTTGCGC 62.044 63.158 0.00 0.00 0.00 6.09
3430 3683 3.057548 CAGATGGTGGCTTGCGCA 61.058 61.111 5.66 5.66 38.10 6.09
3431 3684 2.044650 AGATGGTGGCTTGCGCAT 60.045 55.556 12.75 0.00 38.10 4.73
3432 3685 1.679977 AGATGGTGGCTTGCGCATT 60.680 52.632 12.75 0.00 38.10 3.56
3433 3686 1.216178 GATGGTGGCTTGCGCATTT 59.784 52.632 12.75 0.00 38.10 2.32
3434 3687 0.390209 GATGGTGGCTTGCGCATTTT 60.390 50.000 12.75 0.00 38.10 1.82
3435 3688 0.390209 ATGGTGGCTTGCGCATTTTC 60.390 50.000 12.75 1.92 38.10 2.29
3436 3689 1.006337 GGTGGCTTGCGCATTTTCA 60.006 52.632 12.75 4.93 38.10 2.69
3437 3690 0.599728 GGTGGCTTGCGCATTTTCAA 60.600 50.000 12.75 0.00 38.10 2.69
3438 3691 1.431496 GTGGCTTGCGCATTTTCAAT 58.569 45.000 12.75 0.00 38.10 2.57
3439 3692 1.127213 GTGGCTTGCGCATTTTCAATG 59.873 47.619 12.75 0.00 38.10 2.82
3440 3693 0.095762 GGCTTGCGCATTTTCAATGC 59.904 50.000 12.75 10.82 41.35 3.56
3441 3694 0.791422 GCTTGCGCATTTTCAATGCA 59.209 45.000 12.75 0.00 44.75 3.96
3442 3695 1.395608 GCTTGCGCATTTTCAATGCAT 59.604 42.857 12.75 0.00 44.75 3.96
3443 3696 2.159626 GCTTGCGCATTTTCAATGCATT 60.160 40.909 12.75 5.99 44.75 3.56
3444 3697 3.668491 GCTTGCGCATTTTCAATGCATTT 60.668 39.130 12.75 0.00 44.75 2.32
3445 3698 4.468643 CTTGCGCATTTTCAATGCATTTT 58.531 34.783 12.75 0.00 44.75 1.82
3446 3699 4.485024 TGCGCATTTTCAATGCATTTTT 57.515 31.818 18.90 0.00 44.75 1.94
3490 3743 9.871238 TGTCCTAAAATTTCTAGATGTACACTC 57.129 33.333 0.00 0.00 0.00 3.51
3496 3749 8.779354 AAATTTCTAGATGTACACTCTTCACC 57.221 34.615 0.00 0.00 0.00 4.02
3497 3750 5.562506 TTCTAGATGTACACTCTTCACCG 57.437 43.478 0.00 0.00 0.00 4.94
3498 3751 3.945921 TCTAGATGTACACTCTTCACCGG 59.054 47.826 0.00 0.00 0.00 5.28
3499 3752 2.803956 AGATGTACACTCTTCACCGGA 58.196 47.619 9.46 0.00 0.00 5.14
3500 3753 2.492484 AGATGTACACTCTTCACCGGAC 59.508 50.000 9.46 0.00 0.00 4.79
3501 3754 0.594602 TGTACACTCTTCACCGGACG 59.405 55.000 9.46 0.00 0.00 4.79
3502 3755 0.109412 GTACACTCTTCACCGGACGG 60.109 60.000 9.46 9.56 42.03 4.79
3503 3756 0.250858 TACACTCTTCACCGGACGGA 60.251 55.000 18.80 0.00 38.96 4.69
3504 3757 1.213013 CACTCTTCACCGGACGGAG 59.787 63.158 18.80 10.03 38.96 4.63
3505 3758 1.977544 ACTCTTCACCGGACGGAGG 60.978 63.158 18.80 9.15 38.96 4.30
3506 3759 1.677966 CTCTTCACCGGACGGAGGA 60.678 63.158 18.80 11.39 38.96 3.71
3507 3760 1.228644 TCTTCACCGGACGGAGGAA 60.229 57.895 18.80 17.56 38.96 3.36
3508 3761 1.215647 CTTCACCGGACGGAGGAAG 59.784 63.158 23.82 23.82 40.59 3.46
3509 3762 1.532316 TTCACCGGACGGAGGAAGT 60.532 57.895 18.80 0.00 38.96 3.01
3510 3763 0.251297 TTCACCGGACGGAGGAAGTA 60.251 55.000 18.80 0.00 38.96 2.24
3511 3764 0.251297 TCACCGGACGGAGGAAGTAA 60.251 55.000 18.80 0.00 38.96 2.24
3512 3765 0.172803 CACCGGACGGAGGAAGTAAG 59.827 60.000 18.80 0.00 38.96 2.34
3513 3766 0.251519 ACCGGACGGAGGAAGTAAGT 60.252 55.000 18.80 0.00 38.96 2.24
3514 3767 1.004745 ACCGGACGGAGGAAGTAAGTA 59.995 52.381 18.80 0.00 38.96 2.24
3515 3768 2.094675 CCGGACGGAGGAAGTAAGTAA 58.905 52.381 4.40 0.00 37.50 2.24
3516 3769 2.692041 CCGGACGGAGGAAGTAAGTAAT 59.308 50.000 4.40 0.00 37.50 1.89
3517 3770 3.131755 CCGGACGGAGGAAGTAAGTAATT 59.868 47.826 4.40 0.00 37.50 1.40
3518 3771 4.339247 CCGGACGGAGGAAGTAAGTAATTA 59.661 45.833 4.40 0.00 37.50 1.40
3519 3772 5.506982 CCGGACGGAGGAAGTAAGTAATTAG 60.507 48.000 4.40 0.00 37.50 1.73
3520 3773 5.288015 GGACGGAGGAAGTAAGTAATTAGC 58.712 45.833 0.00 0.00 0.00 3.09
3521 3774 5.163478 GGACGGAGGAAGTAAGTAATTAGCA 60.163 44.000 0.00 0.00 0.00 3.49
3522 3775 5.658468 ACGGAGGAAGTAAGTAATTAGCAC 58.342 41.667 0.00 0.00 0.00 4.40
3523 3776 5.048507 CGGAGGAAGTAAGTAATTAGCACC 58.951 45.833 0.00 0.00 0.00 5.01
3524 3777 5.394883 CGGAGGAAGTAAGTAATTAGCACCA 60.395 44.000 0.00 0.00 0.00 4.17
3525 3778 6.412214 GGAGGAAGTAAGTAATTAGCACCAA 58.588 40.000 0.00 0.00 0.00 3.67
3526 3779 6.882678 GGAGGAAGTAAGTAATTAGCACCAAA 59.117 38.462 0.00 0.00 0.00 3.28
3527 3780 7.065923 GGAGGAAGTAAGTAATTAGCACCAAAG 59.934 40.741 0.00 0.00 0.00 2.77
3528 3781 6.884836 AGGAAGTAAGTAATTAGCACCAAAGG 59.115 38.462 0.00 0.00 0.00 3.11
3529 3782 6.882678 GGAAGTAAGTAATTAGCACCAAAGGA 59.117 38.462 0.00 0.00 0.00 3.36
3530 3783 7.392393 GGAAGTAAGTAATTAGCACCAAAGGAA 59.608 37.037 0.00 0.00 0.00 3.36
3531 3784 7.923414 AGTAAGTAATTAGCACCAAAGGAAG 57.077 36.000 0.00 0.00 0.00 3.46
3532 3785 5.644977 AAGTAATTAGCACCAAAGGAAGC 57.355 39.130 0.00 0.00 0.00 3.86
3533 3786 3.689649 AGTAATTAGCACCAAAGGAAGCG 59.310 43.478 0.00 0.00 33.94 4.68
3534 3787 2.489938 ATTAGCACCAAAGGAAGCGA 57.510 45.000 0.00 0.00 33.94 4.93
3535 3788 2.489938 TTAGCACCAAAGGAAGCGAT 57.510 45.000 0.00 0.00 33.94 4.58
3536 3789 1.737838 TAGCACCAAAGGAAGCGATG 58.262 50.000 0.00 0.00 33.94 3.84
3537 3790 0.036732 AGCACCAAAGGAAGCGATGA 59.963 50.000 0.00 0.00 33.94 2.92
3538 3791 1.098050 GCACCAAAGGAAGCGATGAT 58.902 50.000 0.00 0.00 0.00 2.45
3539 3792 2.092968 AGCACCAAAGGAAGCGATGATA 60.093 45.455 0.00 0.00 33.94 2.15
3540 3793 2.880890 GCACCAAAGGAAGCGATGATAT 59.119 45.455 0.00 0.00 0.00 1.63
3541 3794 4.065088 GCACCAAAGGAAGCGATGATATA 58.935 43.478 0.00 0.00 0.00 0.86
3542 3795 4.697352 GCACCAAAGGAAGCGATGATATAT 59.303 41.667 0.00 0.00 0.00 0.86
3543 3796 5.182001 GCACCAAAGGAAGCGATGATATATT 59.818 40.000 0.00 0.00 0.00 1.28
3544 3797 6.371548 GCACCAAAGGAAGCGATGATATATTA 59.628 38.462 0.00 0.00 0.00 0.98
3545 3798 7.094805 GCACCAAAGGAAGCGATGATATATTAA 60.095 37.037 0.00 0.00 0.00 1.40
3546 3799 8.783093 CACCAAAGGAAGCGATGATATATTAAA 58.217 33.333 0.00 0.00 0.00 1.52
3547 3800 8.784043 ACCAAAGGAAGCGATGATATATTAAAC 58.216 33.333 0.00 0.00 0.00 2.01
3548 3801 7.957484 CCAAAGGAAGCGATGATATATTAAACG 59.043 37.037 0.00 0.00 0.00 3.60
3549 3802 6.648725 AGGAAGCGATGATATATTAAACGC 57.351 37.500 17.77 17.77 43.84 4.84
3550 3803 6.163476 AGGAAGCGATGATATATTAAACGCA 58.837 36.000 23.17 4.30 45.47 5.24
3551 3804 6.649141 AGGAAGCGATGATATATTAAACGCAA 59.351 34.615 23.17 0.00 45.47 4.85
3552 3805 6.955963 GGAAGCGATGATATATTAAACGCAAG 59.044 38.462 23.17 4.39 45.47 4.01
3569 3822 4.552166 GCAAGTCTGCTGTGAAGTAAAA 57.448 40.909 0.00 0.00 45.74 1.52
3570 3823 5.113502 GCAAGTCTGCTGTGAAGTAAAAT 57.886 39.130 0.00 0.00 45.74 1.82
3571 3824 4.913924 GCAAGTCTGCTGTGAAGTAAAATG 59.086 41.667 0.00 0.00 45.74 2.32
3572 3825 5.277974 GCAAGTCTGCTGTGAAGTAAAATGA 60.278 40.000 0.00 0.00 45.74 2.57
3573 3826 6.569226 GCAAGTCTGCTGTGAAGTAAAATGAT 60.569 38.462 0.00 0.00 45.74 2.45
3574 3827 7.365741 CAAGTCTGCTGTGAAGTAAAATGATT 58.634 34.615 0.00 0.00 0.00 2.57
3575 3828 8.506437 CAAGTCTGCTGTGAAGTAAAATGATTA 58.494 33.333 0.00 0.00 0.00 1.75
3576 3829 8.034058 AGTCTGCTGTGAAGTAAAATGATTAC 57.966 34.615 0.00 0.00 0.00 1.89
3577 3830 7.661437 AGTCTGCTGTGAAGTAAAATGATTACA 59.339 33.333 1.68 0.00 0.00 2.41
3578 3831 7.746475 GTCTGCTGTGAAGTAAAATGATTACAC 59.254 37.037 0.00 0.00 0.00 2.90
3579 3832 7.443879 TCTGCTGTGAAGTAAAATGATTACACA 59.556 33.333 0.00 0.00 36.03 3.72
3580 3833 7.935520 TGCTGTGAAGTAAAATGATTACACAA 58.064 30.769 0.00 0.00 36.76 3.33
3581 3834 8.409371 TGCTGTGAAGTAAAATGATTACACAAA 58.591 29.630 0.00 0.00 36.76 2.83
3582 3835 9.410556 GCTGTGAAGTAAAATGATTACACAAAT 57.589 29.630 0.00 0.00 36.76 2.32
3601 3854 9.979578 ACACAAATAATACAAAGCAGAATTTCA 57.020 25.926 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.902486 TCACTTCTCTGCTCCAATGTCT 59.098 45.455 0.00 0.00 0.00 3.41
49 50 9.268268 CATCTAAAAACTGTGAGGTAAGTTGTA 57.732 33.333 0.00 0.00 36.75 2.41
100 101 2.291089 TGATGATGGTGTGTCTGCCATT 60.291 45.455 0.00 0.00 44.73 3.16
235 236 2.924421 TGCCACACAAACATCAGTGTA 58.076 42.857 0.00 0.00 46.44 2.90
325 326 8.231837 GGCTCATTTTACACACGTTATTTTCTA 58.768 33.333 0.00 0.00 0.00 2.10
327 328 6.858993 TGGCTCATTTTACACACGTTATTTTC 59.141 34.615 0.00 0.00 0.00 2.29
404 405 7.855784 TTGATAACTAAGATGGCCTCTCATA 57.144 36.000 3.32 0.00 31.03 2.15
483 485 2.391389 GCGCCGGAAAGGACTTGAG 61.391 63.158 5.05 0.00 45.00 3.02
492 494 3.791973 ATATGAAAAATGCGCCGGAAA 57.208 38.095 5.05 0.00 0.00 3.13
515 517 3.249080 GCCTGTCAGTACGTTAGCAAAAA 59.751 43.478 0.00 0.00 0.00 1.94
595 597 0.921166 TGACATGGCATGAGACCCAT 59.079 50.000 32.74 9.40 42.41 4.00
600 602 0.393402 GGCACTGACATGGCATGAGA 60.393 55.000 32.74 17.06 44.34 3.27
602 604 4.324471 GGCACTGACATGGCATGA 57.676 55.556 32.74 11.51 44.34 3.07
648 650 3.065786 CCGGTCTATAGACGTAAAGTGCA 59.934 47.826 23.35 0.00 45.65 4.57
707 709 4.778904 TGAAAAAGACGCCGAATTAGTTG 58.221 39.130 0.00 0.00 0.00 3.16
711 713 5.007823 TGAACTTGAAAAAGACGCCGAATTA 59.992 36.000 0.00 0.00 0.00 1.40
722 724 6.473455 CACTTTAGTGCCTGAACTTGAAAAAG 59.527 38.462 0.00 0.00 39.39 2.27
795 797 5.816258 GCTAATTAAGGGTACGCTTTCTTCT 59.184 40.000 27.65 12.31 0.00 2.85
796 798 5.583457 TGCTAATTAAGGGTACGCTTTCTTC 59.417 40.000 27.65 13.87 0.00 2.87
797 799 5.493809 TGCTAATTAAGGGTACGCTTTCTT 58.506 37.500 27.65 21.66 0.00 2.52
798 800 5.093849 TGCTAATTAAGGGTACGCTTTCT 57.906 39.130 27.65 15.62 0.00 2.52
799 801 5.758784 AGATGCTAATTAAGGGTACGCTTTC 59.241 40.000 27.65 16.88 0.00 2.62
800 802 5.681639 AGATGCTAATTAAGGGTACGCTTT 58.318 37.500 27.65 14.27 0.00 3.51
801 803 5.291905 AGATGCTAATTAAGGGTACGCTT 57.708 39.130 26.07 26.07 0.00 4.68
802 804 4.558898 CGAGATGCTAATTAAGGGTACGCT 60.559 45.833 6.62 6.62 0.00 5.07
803 805 3.673809 CGAGATGCTAATTAAGGGTACGC 59.326 47.826 0.77 0.77 0.00 4.42
804 806 3.673809 GCGAGATGCTAATTAAGGGTACG 59.326 47.826 0.00 0.00 41.73 3.67
818 820 1.202394 ACATGACAGAGAGCGAGATGC 60.202 52.381 0.00 0.00 46.98 3.91
819 821 2.867287 ACATGACAGAGAGCGAGATG 57.133 50.000 0.00 0.00 0.00 2.90
820 822 3.194329 TGAAACATGACAGAGAGCGAGAT 59.806 43.478 0.00 0.00 0.00 2.75
821 823 2.558359 TGAAACATGACAGAGAGCGAGA 59.442 45.455 0.00 0.00 0.00 4.04
822 824 2.951726 TGAAACATGACAGAGAGCGAG 58.048 47.619 0.00 0.00 0.00 5.03
823 825 3.256558 CATGAAACATGACAGAGAGCGA 58.743 45.455 0.00 0.00 0.00 4.93
824 826 2.222976 GCATGAAACATGACAGAGAGCG 60.223 50.000 14.65 0.00 0.00 5.03
825 827 2.097142 GGCATGAAACATGACAGAGAGC 59.903 50.000 14.65 0.00 0.00 4.09
826 828 3.340928 TGGCATGAAACATGACAGAGAG 58.659 45.455 15.06 0.00 30.96 3.20
827 829 3.421919 TGGCATGAAACATGACAGAGA 57.578 42.857 15.06 0.00 30.96 3.10
831 833 2.161855 GACCTGGCATGAAACATGACA 58.838 47.619 17.47 17.47 35.45 3.58
832 834 1.474077 GGACCTGGCATGAAACATGAC 59.526 52.381 14.65 12.49 0.00 3.06
833 835 1.075212 TGGACCTGGCATGAAACATGA 59.925 47.619 14.65 0.00 0.00 3.07
834 836 1.548081 TGGACCTGGCATGAAACATG 58.452 50.000 0.00 7.29 0.00 3.21
835 837 2.104967 CATGGACCTGGCATGAAACAT 58.895 47.619 8.17 0.00 0.00 2.71
836 838 1.548081 CATGGACCTGGCATGAAACA 58.452 50.000 8.17 0.00 0.00 2.83
837 839 0.174162 GCATGGACCTGGCATGAAAC 59.826 55.000 15.75 0.00 0.00 2.78
838 840 0.971959 GGCATGGACCTGGCATGAAA 60.972 55.000 15.75 0.00 41.12 2.69
839 841 1.380246 GGCATGGACCTGGCATGAA 60.380 57.895 15.75 0.00 41.12 2.57
910 912 0.533085 GATGGGCCGGAGTAAAGCTC 60.533 60.000 5.05 0.00 43.39 4.09
940 942 1.865340 GATAGGCCGGACGATGTTTTC 59.135 52.381 8.01 0.00 0.00 2.29
944 946 1.046472 TTGGATAGGCCGGACGATGT 61.046 55.000 8.01 0.00 40.66 3.06
947 949 1.380785 ACTTGGATAGGCCGGACGA 60.381 57.895 5.05 0.00 40.66 4.20
1014 1021 2.435693 GGACGAGGGGAGTGGATGG 61.436 68.421 0.00 0.00 0.00 3.51
1031 1038 2.203252 CATGGCCATGGGACGAGG 60.203 66.667 34.31 9.41 35.24 4.63
1096 1103 2.359967 GGTGGAGACGGAGAAGGGG 61.360 68.421 0.00 0.00 0.00 4.79
1097 1104 1.305381 AGGTGGAGACGGAGAAGGG 60.305 63.158 0.00 0.00 0.00 3.95
1098 1105 1.324005 GGAGGTGGAGACGGAGAAGG 61.324 65.000 0.00 0.00 0.00 3.46
1178 1185 6.006275 TCCTGGATTTCAAATTAGAGGGAG 57.994 41.667 0.00 0.00 0.00 4.30
1179 1186 6.401537 TTCCTGGATTTCAAATTAGAGGGA 57.598 37.500 0.00 0.00 0.00 4.20
1221 1422 1.679898 GTGAGTGAACTGGGAGGGG 59.320 63.158 0.00 0.00 0.00 4.79
1346 1547 2.187946 GGCGCATCAGTACCAGCT 59.812 61.111 10.83 0.00 0.00 4.24
1349 1550 3.792736 GGGGGCGCATCAGTACCA 61.793 66.667 10.83 0.00 0.00 3.25
1356 1557 4.759205 AGGGTTTGGGGGCGCATC 62.759 66.667 10.83 0.00 0.00 3.91
1357 1558 4.759205 GAGGGTTTGGGGGCGCAT 62.759 66.667 10.83 0.00 0.00 4.73
1385 1586 0.611200 ACAGTACCGCATTGTAGGCA 59.389 50.000 0.00 0.00 0.00 4.75
1386 1587 1.734163 AACAGTACCGCATTGTAGGC 58.266 50.000 0.00 0.00 0.00 3.93
1389 1590 5.047872 TGAGAGTAAACAGTACCGCATTGTA 60.048 40.000 0.00 0.00 0.00 2.41
1396 1597 4.557690 CGAACATGAGAGTAAACAGTACCG 59.442 45.833 0.00 0.00 0.00 4.02
1397 1598 5.467705 ACGAACATGAGAGTAAACAGTACC 58.532 41.667 0.00 0.00 0.00 3.34
1398 1599 6.746364 CCTACGAACATGAGAGTAAACAGTAC 59.254 42.308 0.00 0.00 0.00 2.73
1400 1601 5.475909 TCCTACGAACATGAGAGTAAACAGT 59.524 40.000 0.00 0.00 0.00 3.55
1404 1605 5.125097 GGTCTCCTACGAACATGAGAGTAAA 59.875 44.000 0.00 0.00 34.72 2.01
1405 1606 4.639310 GGTCTCCTACGAACATGAGAGTAA 59.361 45.833 0.00 0.00 34.72 2.24
1407 1608 3.018149 GGTCTCCTACGAACATGAGAGT 58.982 50.000 0.00 0.00 34.72 3.24
1408 1609 3.017442 TGGTCTCCTACGAACATGAGAG 58.983 50.000 0.00 0.00 34.72 3.20
1409 1610 3.081710 TGGTCTCCTACGAACATGAGA 57.918 47.619 0.00 0.00 0.00 3.27
1410 1611 3.775202 CTTGGTCTCCTACGAACATGAG 58.225 50.000 0.00 0.00 29.37 2.90
1411 1612 2.094182 GCTTGGTCTCCTACGAACATGA 60.094 50.000 0.00 0.00 29.37 3.07
1412 1613 2.271800 GCTTGGTCTCCTACGAACATG 58.728 52.381 0.00 0.00 29.37 3.21
1418 1620 2.494918 CCGGCTTGGTCTCCTACG 59.505 66.667 0.00 0.00 0.00 3.51
2338 2540 2.500098 TCACGATGTCCCTTCCCTTTAG 59.500 50.000 0.00 0.00 0.00 1.85
2340 2542 1.003233 GTCACGATGTCCCTTCCCTTT 59.997 52.381 0.00 0.00 0.00 3.11
2343 2545 0.108138 CTGTCACGATGTCCCTTCCC 60.108 60.000 0.00 0.00 0.00 3.97
2355 2557 1.432514 CAATGTCCTCCACTGTCACG 58.567 55.000 0.00 0.00 0.00 4.35
2379 2581 2.226437 CCTCAAACAGTTGGGAATCACG 59.774 50.000 0.00 0.00 37.41 4.35
2385 2587 1.881925 CGATGCCTCAAACAGTTGGGA 60.882 52.381 4.85 0.00 37.41 4.37
2485 2687 4.564769 CAGAGAAACATTTACCTCGAGAGC 59.435 45.833 15.71 0.00 0.00 4.09
2515 2717 3.295973 ACAAAAAGCCTTCTGCCTTACA 58.704 40.909 0.00 0.00 42.71 2.41
2525 2727 1.111277 ACAGCCGAACAAAAAGCCTT 58.889 45.000 0.00 0.00 0.00 4.35
2614 2816 4.362279 TCACCATAATTAACGCTCGGTAC 58.638 43.478 0.00 0.00 0.00 3.34
2670 2872 0.323629 CAGGTCGGGGAAAGTGCTAA 59.676 55.000 0.00 0.00 0.00 3.09
2681 2883 2.432628 GCACGAAGACAGGTCGGG 60.433 66.667 0.00 0.00 44.81 5.14
2684 2886 2.047179 GGGGCACGAAGACAGGTC 60.047 66.667 0.00 0.00 0.00 3.85
2685 2887 2.526873 AGGGGCACGAAGACAGGT 60.527 61.111 0.00 0.00 0.00 4.00
2687 2889 2.743928 GCAGGGGCACGAAGACAG 60.744 66.667 0.00 0.00 40.72 3.51
2689 2891 2.435059 GAGCAGGGGCACGAAGAC 60.435 66.667 0.00 0.00 44.61 3.01
2690 2892 2.922503 TGAGCAGGGGCACGAAGA 60.923 61.111 0.00 0.00 44.61 2.87
2691 2893 2.435586 CTGAGCAGGGGCACGAAG 60.436 66.667 0.00 0.00 44.61 3.79
2692 2894 2.922503 TCTGAGCAGGGGCACGAA 60.923 61.111 0.00 0.00 44.61 3.85
2694 2896 4.767255 GGTCTGAGCAGGGGCACG 62.767 72.222 1.28 0.00 44.61 5.34
2695 2897 2.697147 TTTGGTCTGAGCAGGGGCAC 62.697 60.000 9.70 0.00 44.61 5.01
2696 2898 1.792757 ATTTGGTCTGAGCAGGGGCA 61.793 55.000 9.70 0.00 44.61 5.36
2697 2899 0.255890 TATTTGGTCTGAGCAGGGGC 59.744 55.000 9.70 0.00 41.61 5.80
2698 2900 2.579873 CATATTTGGTCTGAGCAGGGG 58.420 52.381 9.70 0.00 0.00 4.79
2699 2901 1.952296 GCATATTTGGTCTGAGCAGGG 59.048 52.381 9.70 1.21 0.00 4.45
2700 2902 2.357009 GTGCATATTTGGTCTGAGCAGG 59.643 50.000 9.70 0.89 0.00 4.85
2701 2903 3.276857 AGTGCATATTTGGTCTGAGCAG 58.723 45.455 9.70 0.00 0.00 4.24
2702 2904 3.354948 AGTGCATATTTGGTCTGAGCA 57.645 42.857 5.28 5.28 0.00 4.26
2703 2905 3.441572 ACAAGTGCATATTTGGTCTGAGC 59.558 43.478 11.58 0.00 0.00 4.26
2704 2906 4.978186 CACAAGTGCATATTTGGTCTGAG 58.022 43.478 11.58 0.00 0.00 3.35
2732 2934 5.082251 AGAAAACAGGGTACTATTCCGAC 57.918 43.478 0.00 0.00 0.00 4.79
2734 2936 5.080969 TGAGAAAACAGGGTACTATTCCG 57.919 43.478 0.00 0.00 0.00 4.30
2739 2941 4.020485 GCTCCTTGAGAAAACAGGGTACTA 60.020 45.833 0.00 0.00 38.06 1.82
2751 2953 3.961480 TTCGATTCAGCTCCTTGAGAA 57.039 42.857 0.00 0.00 0.00 2.87
2768 2970 3.278157 GCCTGGGGCTTTCTTTCG 58.722 61.111 0.80 0.00 46.69 3.46
2789 2991 2.230660 CATGATCACATGGCTGATGCT 58.769 47.619 0.00 0.00 46.95 3.79
2800 3002 5.737860 AGAACTGCATCTTACATGATCACA 58.262 37.500 0.00 0.00 0.00 3.58
2803 3005 7.656412 TCTCTAGAACTGCATCTTACATGATC 58.344 38.462 0.00 0.00 0.00 2.92
2859 3066 8.812329 CAGATTCAGACTTGCTGTAAATAGTAC 58.188 37.037 0.00 0.00 45.14 2.73
2891 3098 6.778834 TGTCAAGCAAATGATGTAATGGAT 57.221 33.333 0.00 0.00 0.00 3.41
2912 3119 3.435671 GCACGAAAATAAGTAGTGGCTGT 59.564 43.478 0.00 0.00 33.80 4.40
2913 3120 3.435327 TGCACGAAAATAAGTAGTGGCTG 59.565 43.478 0.00 0.00 33.80 4.85
2914 3121 3.670625 TGCACGAAAATAAGTAGTGGCT 58.329 40.909 0.00 0.00 33.80 4.75
2915 3122 4.094294 TGATGCACGAAAATAAGTAGTGGC 59.906 41.667 0.00 0.00 33.80 5.01
2916 3123 5.580691 TCTGATGCACGAAAATAAGTAGTGG 59.419 40.000 0.00 0.00 33.80 4.00
2917 3124 6.647212 TCTGATGCACGAAAATAAGTAGTG 57.353 37.500 0.00 0.00 36.05 2.74
2951 3187 6.529125 GCAACTTGACAGCGTTACTACTAATA 59.471 38.462 0.00 0.00 0.00 0.98
2952 3188 5.347907 GCAACTTGACAGCGTTACTACTAAT 59.652 40.000 0.00 0.00 0.00 1.73
2953 3189 4.682860 GCAACTTGACAGCGTTACTACTAA 59.317 41.667 0.00 0.00 0.00 2.24
2954 3190 4.232221 GCAACTTGACAGCGTTACTACTA 58.768 43.478 0.00 0.00 0.00 1.82
2960 3200 2.875317 TCAATGCAACTTGACAGCGTTA 59.125 40.909 0.00 0.00 35.87 3.18
2969 3209 4.036734 ACACCACTAGTTCAATGCAACTTG 59.963 41.667 0.00 0.00 37.75 3.16
3009 3251 1.212751 GTTCGGCACTTTCCATGGC 59.787 57.895 6.96 0.00 39.18 4.40
3024 3266 9.696917 AACAGAGATTGAATTAACCAAATGTTC 57.303 29.630 0.00 0.00 38.42 3.18
3043 3285 9.772973 TTGTTCAAATAGTTAGCTTAACAGAGA 57.227 29.630 0.00 0.00 41.07 3.10
3062 3304 8.110860 GGAAGACATCCTCTTTATTTGTTCAA 57.889 34.615 0.00 0.00 45.56 2.69
3095 3347 6.926272 ACAAGTTTTAACACAAAACTGCTCAA 59.074 30.769 14.04 0.00 46.33 3.02
3102 3354 7.323046 TGTTCGACAAGTTTTAACACAAAAC 57.677 32.000 4.79 4.79 39.67 2.43
3122 3374 6.152379 GGATGGAGTGTTCATTCTTTTGTTC 58.848 40.000 0.00 0.00 0.00 3.18
3141 3393 1.642037 CGAGCTGTGCTTGTGGATGG 61.642 60.000 0.00 0.00 39.88 3.51
3142 3394 1.642037 CCGAGCTGTGCTTGTGGATG 61.642 60.000 0.00 0.00 39.88 3.51
3145 3398 2.281070 ACCGAGCTGTGCTTGTGG 60.281 61.111 0.00 5.71 39.88 4.17
3161 3414 9.503427 GTAATAATGCCAATAACAGAACTTCAC 57.497 33.333 0.00 0.00 0.00 3.18
3162 3415 8.682710 GGTAATAATGCCAATAACAGAACTTCA 58.317 33.333 0.00 0.00 0.00 3.02
3163 3416 8.903820 AGGTAATAATGCCAATAACAGAACTTC 58.096 33.333 0.00 0.00 32.95 3.01
3164 3417 8.823220 AGGTAATAATGCCAATAACAGAACTT 57.177 30.769 0.00 0.00 32.95 2.66
3165 3418 9.338622 GTAGGTAATAATGCCAATAACAGAACT 57.661 33.333 0.00 0.00 32.95 3.01
3166 3419 9.338622 AGTAGGTAATAATGCCAATAACAGAAC 57.661 33.333 0.00 0.00 32.95 3.01
3167 3420 9.914834 AAGTAGGTAATAATGCCAATAACAGAA 57.085 29.630 0.00 0.00 32.95 3.02
3168 3421 9.914834 AAAGTAGGTAATAATGCCAATAACAGA 57.085 29.630 0.00 0.00 32.95 3.41
3185 3438 9.880157 GGAGTATGTCATGTTTTAAAGTAGGTA 57.120 33.333 0.00 0.00 0.00 3.08
3186 3439 7.827729 GGGAGTATGTCATGTTTTAAAGTAGGT 59.172 37.037 0.00 0.00 0.00 3.08
3187 3440 8.047310 AGGGAGTATGTCATGTTTTAAAGTAGG 58.953 37.037 0.00 0.00 0.00 3.18
3188 3441 9.099454 GAGGGAGTATGTCATGTTTTAAAGTAG 57.901 37.037 0.00 0.00 0.00 2.57
3189 3442 8.044908 GGAGGGAGTATGTCATGTTTTAAAGTA 58.955 37.037 0.00 0.00 0.00 2.24
3190 3443 6.884836 GGAGGGAGTATGTCATGTTTTAAAGT 59.115 38.462 0.00 0.00 0.00 2.66
3191 3444 6.884295 TGGAGGGAGTATGTCATGTTTTAAAG 59.116 38.462 0.00 0.00 0.00 1.85
3192 3445 6.785076 TGGAGGGAGTATGTCATGTTTTAAA 58.215 36.000 0.00 0.00 0.00 1.52
3193 3446 6.381498 TGGAGGGAGTATGTCATGTTTTAA 57.619 37.500 0.00 0.00 0.00 1.52
3194 3447 6.409234 GGATGGAGGGAGTATGTCATGTTTTA 60.409 42.308 0.00 0.00 0.00 1.52
3195 3448 4.927267 TGGAGGGAGTATGTCATGTTTT 57.073 40.909 0.00 0.00 0.00 2.43
3196 3449 4.141390 GGATGGAGGGAGTATGTCATGTTT 60.141 45.833 0.00 0.00 0.00 2.83
3197 3450 3.392616 GGATGGAGGGAGTATGTCATGTT 59.607 47.826 0.00 0.00 0.00 2.71
3198 3451 2.975489 GGATGGAGGGAGTATGTCATGT 59.025 50.000 0.00 0.00 0.00 3.21
3199 3452 2.028658 CGGATGGAGGGAGTATGTCATG 60.029 54.545 0.00 0.00 0.00 3.07
3200 3453 2.251818 CGGATGGAGGGAGTATGTCAT 58.748 52.381 0.00 0.00 0.00 3.06
3201 3454 1.704641 CGGATGGAGGGAGTATGTCA 58.295 55.000 0.00 0.00 0.00 3.58
3202 3455 0.969894 CCGGATGGAGGGAGTATGTC 59.030 60.000 0.00 0.00 37.49 3.06
3203 3456 0.264955 ACCGGATGGAGGGAGTATGT 59.735 55.000 9.46 0.00 39.21 2.29
3204 3457 0.681733 CACCGGATGGAGGGAGTATG 59.318 60.000 9.46 0.00 39.21 2.39
3205 3458 0.561184 TCACCGGATGGAGGGAGTAT 59.439 55.000 9.46 0.00 39.21 2.12
3206 3459 0.337082 TTCACCGGATGGAGGGAGTA 59.663 55.000 9.46 0.00 39.21 2.59
3207 3460 0.978146 CTTCACCGGATGGAGGGAGT 60.978 60.000 9.46 0.00 39.21 3.85
3208 3461 0.687757 TCTTCACCGGATGGAGGGAG 60.688 60.000 9.46 0.00 34.17 4.30
3209 3462 0.687757 CTCTTCACCGGATGGAGGGA 60.688 60.000 9.46 4.57 36.28 4.20
3210 3463 0.978146 ACTCTTCACCGGATGGAGGG 60.978 60.000 9.46 9.72 40.89 4.30
3211 3464 0.176680 CACTCTTCACCGGATGGAGG 59.823 60.000 9.46 3.15 34.17 4.30
3212 3465 0.898320 ACACTCTTCACCGGATGGAG 59.102 55.000 9.46 12.33 39.21 3.86
3213 3466 1.822990 GTACACTCTTCACCGGATGGA 59.177 52.381 9.46 0.00 39.21 3.41
3214 3467 1.548719 TGTACACTCTTCACCGGATGG 59.451 52.381 9.46 0.00 42.84 3.51
3215 3468 3.131223 AGATGTACACTCTTCACCGGATG 59.869 47.826 9.46 2.48 0.00 3.51
3216 3469 3.366396 AGATGTACACTCTTCACCGGAT 58.634 45.455 9.46 0.00 0.00 4.18
3217 3470 2.803956 AGATGTACACTCTTCACCGGA 58.196 47.619 9.46 0.00 0.00 5.14
3218 3471 3.489398 GCTAGATGTACACTCTTCACCGG 60.489 52.174 0.00 0.00 0.00 5.28
3219 3472 3.378742 AGCTAGATGTACACTCTTCACCG 59.621 47.826 0.00 0.00 0.00 4.94
3220 3473 4.993029 AGCTAGATGTACACTCTTCACC 57.007 45.455 0.00 0.00 0.00 4.02
3221 3474 5.105716 TGGAAGCTAGATGTACACTCTTCAC 60.106 44.000 17.98 11.86 32.47 3.18
3222 3475 5.016831 TGGAAGCTAGATGTACACTCTTCA 58.983 41.667 17.98 8.29 32.47 3.02
3223 3476 5.584253 TGGAAGCTAGATGTACACTCTTC 57.416 43.478 0.00 6.76 0.00 2.87
3224 3477 6.360370 TTTGGAAGCTAGATGTACACTCTT 57.640 37.500 0.00 0.00 0.00 2.85
3225 3478 6.552445 ATTTGGAAGCTAGATGTACACTCT 57.448 37.500 0.00 5.42 0.00 3.24
3226 3479 7.119846 ACAAATTTGGAAGCTAGATGTACACTC 59.880 37.037 21.74 0.00 0.00 3.51
3227 3480 6.942576 ACAAATTTGGAAGCTAGATGTACACT 59.057 34.615 21.74 0.13 0.00 3.55
3228 3481 7.145932 ACAAATTTGGAAGCTAGATGTACAC 57.854 36.000 21.74 0.00 0.00 2.90
3229 3482 6.374333 GGACAAATTTGGAAGCTAGATGTACA 59.626 38.462 21.74 0.00 0.00 2.90
3230 3483 6.374333 TGGACAAATTTGGAAGCTAGATGTAC 59.626 38.462 21.74 0.00 0.00 2.90
3231 3484 6.374333 GTGGACAAATTTGGAAGCTAGATGTA 59.626 38.462 21.74 0.00 0.00 2.29
3232 3485 5.183904 GTGGACAAATTTGGAAGCTAGATGT 59.816 40.000 21.74 0.00 0.00 3.06
3233 3486 5.183713 TGTGGACAAATTTGGAAGCTAGATG 59.816 40.000 21.74 0.00 0.00 2.90
3234 3487 5.324409 TGTGGACAAATTTGGAAGCTAGAT 58.676 37.500 21.74 0.00 0.00 1.98
3235 3488 4.724399 TGTGGACAAATTTGGAAGCTAGA 58.276 39.130 21.74 3.06 0.00 2.43
3236 3489 5.452078 TTGTGGACAAATTTGGAAGCTAG 57.548 39.130 21.74 0.00 32.11 3.42
3237 3490 5.860941 TTTGTGGACAAATTTGGAAGCTA 57.139 34.783 21.74 4.21 40.55 3.32
3238 3491 4.751767 TTTGTGGACAAATTTGGAAGCT 57.248 36.364 21.74 0.34 40.55 3.74
3239 3492 5.115480 TCTTTTGTGGACAAATTTGGAAGC 58.885 37.500 21.74 9.92 44.30 3.86
3240 3493 6.256321 CACTCTTTTGTGGACAAATTTGGAAG 59.744 38.462 21.74 12.53 44.30 3.46
3241 3494 6.105333 CACTCTTTTGTGGACAAATTTGGAA 58.895 36.000 21.74 4.54 44.30 3.53
3242 3495 5.186797 ACACTCTTTTGTGGACAAATTTGGA 59.813 36.000 21.74 5.62 44.30 3.53
3243 3496 5.418676 ACACTCTTTTGTGGACAAATTTGG 58.581 37.500 21.74 4.79 44.30 3.28
3252 3505 7.540474 AGATAGAAGTACACTCTTTTGTGGA 57.460 36.000 3.13 0.00 41.84 4.02
3253 3506 7.332182 GGAAGATAGAAGTACACTCTTTTGTGG 59.668 40.741 3.13 0.00 41.84 4.17
3254 3507 7.332182 GGGAAGATAGAAGTACACTCTTTTGTG 59.668 40.741 3.13 0.00 43.07 3.33
3255 3508 7.016268 TGGGAAGATAGAAGTACACTCTTTTGT 59.984 37.037 3.13 0.00 0.00 2.83
3256 3509 7.386851 TGGGAAGATAGAAGTACACTCTTTTG 58.613 38.462 3.13 0.00 0.00 2.44
3257 3510 7.554959 TGGGAAGATAGAAGTACACTCTTTT 57.445 36.000 3.13 0.00 0.00 2.27
3258 3511 7.554959 TTGGGAAGATAGAAGTACACTCTTT 57.445 36.000 3.13 0.00 0.00 2.52
3259 3512 7.560368 CATTGGGAAGATAGAAGTACACTCTT 58.440 38.462 3.13 0.20 0.00 2.85
3260 3513 6.407525 GCATTGGGAAGATAGAAGTACACTCT 60.408 42.308 0.00 0.00 0.00 3.24
3261 3514 5.755861 GCATTGGGAAGATAGAAGTACACTC 59.244 44.000 0.00 0.00 0.00 3.51
3262 3515 5.189736 TGCATTGGGAAGATAGAAGTACACT 59.810 40.000 0.00 0.00 0.00 3.55
3263 3516 5.428253 TGCATTGGGAAGATAGAAGTACAC 58.572 41.667 0.00 0.00 0.00 2.90
3264 3517 5.692115 TGCATTGGGAAGATAGAAGTACA 57.308 39.130 0.00 0.00 0.00 2.90
3265 3518 7.573968 AAATGCATTGGGAAGATAGAAGTAC 57.426 36.000 13.82 0.00 0.00 2.73
3266 3519 7.833682 TCAAAATGCATTGGGAAGATAGAAGTA 59.166 33.333 13.82 0.00 0.00 2.24
3267 3520 6.664816 TCAAAATGCATTGGGAAGATAGAAGT 59.335 34.615 13.82 0.00 0.00 3.01
3268 3521 7.104043 TCAAAATGCATTGGGAAGATAGAAG 57.896 36.000 13.82 0.00 0.00 2.85
3269 3522 7.479352 TTCAAAATGCATTGGGAAGATAGAA 57.521 32.000 13.82 4.54 0.00 2.10
3270 3523 7.479352 TTTCAAAATGCATTGGGAAGATAGA 57.521 32.000 13.82 2.17 0.00 1.98
3271 3524 9.472361 CTATTTCAAAATGCATTGGGAAGATAG 57.528 33.333 13.82 19.42 0.00 2.08
3272 3525 9.199645 TCTATTTCAAAATGCATTGGGAAGATA 57.800 29.630 13.82 15.67 0.00 1.98
3273 3526 8.081517 TCTATTTCAAAATGCATTGGGAAGAT 57.918 30.769 13.82 15.44 0.00 2.40
3274 3527 7.479352 TCTATTTCAAAATGCATTGGGAAGA 57.521 32.000 13.82 10.27 0.00 2.87
3275 3528 8.550710 TTTCTATTTCAAAATGCATTGGGAAG 57.449 30.769 13.82 8.26 0.00 3.46
3276 3529 8.915057 TTTTCTATTTCAAAATGCATTGGGAA 57.085 26.923 13.82 16.08 0.00 3.97
3277 3530 8.915057 TTTTTCTATTTCAAAATGCATTGGGA 57.085 26.923 13.82 10.80 0.00 4.37
3302 3555 4.273480 CCGTGTGATGAGACAGAAGTTTTT 59.727 41.667 0.00 0.00 0.00 1.94
3303 3556 3.809832 CCGTGTGATGAGACAGAAGTTTT 59.190 43.478 0.00 0.00 0.00 2.43
3304 3557 3.181465 ACCGTGTGATGAGACAGAAGTTT 60.181 43.478 0.00 0.00 0.00 2.66
3305 3558 2.365617 ACCGTGTGATGAGACAGAAGTT 59.634 45.455 0.00 0.00 0.00 2.66
3306 3559 1.964223 ACCGTGTGATGAGACAGAAGT 59.036 47.619 0.00 0.00 0.00 3.01
3307 3560 2.732412 ACCGTGTGATGAGACAGAAG 57.268 50.000 0.00 0.00 0.00 2.85
3308 3561 4.219725 TGATTACCGTGTGATGAGACAGAA 59.780 41.667 0.00 0.00 0.00 3.02
3309 3562 3.761752 TGATTACCGTGTGATGAGACAGA 59.238 43.478 0.00 0.00 0.00 3.41
3310 3563 4.110036 TGATTACCGTGTGATGAGACAG 57.890 45.455 0.00 0.00 0.00 3.51
3311 3564 4.219725 TCTTGATTACCGTGTGATGAGACA 59.780 41.667 0.00 0.00 0.00 3.41
3312 3565 4.744570 TCTTGATTACCGTGTGATGAGAC 58.255 43.478 0.00 0.00 0.00 3.36
3313 3566 5.127031 TGATCTTGATTACCGTGTGATGAGA 59.873 40.000 0.00 0.00 0.00 3.27
3314 3567 5.351458 TGATCTTGATTACCGTGTGATGAG 58.649 41.667 0.00 0.00 0.00 2.90
3315 3568 5.337578 TGATCTTGATTACCGTGTGATGA 57.662 39.130 0.00 0.00 0.00 2.92
3316 3569 6.609237 ATTGATCTTGATTACCGTGTGATG 57.391 37.500 0.00 0.00 0.00 3.07
3317 3570 6.425114 GCTATTGATCTTGATTACCGTGTGAT 59.575 38.462 0.00 0.00 0.00 3.06
3318 3571 5.753438 GCTATTGATCTTGATTACCGTGTGA 59.247 40.000 0.00 0.00 0.00 3.58
3319 3572 5.523552 TGCTATTGATCTTGATTACCGTGTG 59.476 40.000 0.00 0.00 0.00 3.82
3320 3573 5.670485 TGCTATTGATCTTGATTACCGTGT 58.330 37.500 0.00 0.00 0.00 4.49
3321 3574 6.603237 TTGCTATTGATCTTGATTACCGTG 57.397 37.500 0.00 0.00 0.00 4.94
3322 3575 7.220030 AGATTGCTATTGATCTTGATTACCGT 58.780 34.615 0.00 0.00 28.42 4.83
3323 3576 7.664082 AGATTGCTATTGATCTTGATTACCG 57.336 36.000 0.00 0.00 28.42 4.02
3324 3577 9.494271 TGTAGATTGCTATTGATCTTGATTACC 57.506 33.333 0.00 0.00 34.60 2.85
3327 3580 8.969260 TGTGTAGATTGCTATTGATCTTGATT 57.031 30.769 0.00 0.00 34.60 2.57
3328 3581 9.000486 CATGTGTAGATTGCTATTGATCTTGAT 58.000 33.333 0.00 0.00 34.60 2.57
3329 3582 7.989170 ACATGTGTAGATTGCTATTGATCTTGA 59.011 33.333 0.00 0.00 34.60 3.02
3330 3583 8.151141 ACATGTGTAGATTGCTATTGATCTTG 57.849 34.615 0.00 0.00 34.60 3.02
3331 3584 8.743085 AACATGTGTAGATTGCTATTGATCTT 57.257 30.769 0.00 0.00 34.60 2.40
3332 3585 7.443575 GGAACATGTGTAGATTGCTATTGATCT 59.556 37.037 0.00 0.00 36.61 2.75
3333 3586 7.443575 AGGAACATGTGTAGATTGCTATTGATC 59.556 37.037 0.00 0.00 0.00 2.92
3334 3587 7.285566 AGGAACATGTGTAGATTGCTATTGAT 58.714 34.615 0.00 0.00 0.00 2.57
3335 3588 6.653020 AGGAACATGTGTAGATTGCTATTGA 58.347 36.000 0.00 0.00 0.00 2.57
3336 3589 6.765036 AGAGGAACATGTGTAGATTGCTATTG 59.235 38.462 0.00 0.00 0.00 1.90
3337 3590 6.893583 AGAGGAACATGTGTAGATTGCTATT 58.106 36.000 0.00 0.00 0.00 1.73
3338 3591 6.491714 AGAGGAACATGTGTAGATTGCTAT 57.508 37.500 0.00 0.00 0.00 2.97
3339 3592 5.939764 AGAGGAACATGTGTAGATTGCTA 57.060 39.130 0.00 0.00 0.00 3.49
3340 3593 4.833478 AGAGGAACATGTGTAGATTGCT 57.167 40.909 0.00 0.00 0.00 3.91
3341 3594 6.985188 TTAAGAGGAACATGTGTAGATTGC 57.015 37.500 0.00 0.00 0.00 3.56
3342 3595 9.994432 GAAATTAAGAGGAACATGTGTAGATTG 57.006 33.333 0.00 0.00 0.00 2.67
3343 3596 9.965902 AGAAATTAAGAGGAACATGTGTAGATT 57.034 29.630 0.00 0.00 0.00 2.40
3345 3598 9.871238 GTAGAAATTAAGAGGAACATGTGTAGA 57.129 33.333 0.00 0.00 0.00 2.59
3346 3599 9.653287 TGTAGAAATTAAGAGGAACATGTGTAG 57.347 33.333 0.00 0.00 0.00 2.74
3348 3601 8.950210 CATGTAGAAATTAAGAGGAACATGTGT 58.050 33.333 0.00 0.00 38.60 3.72
3349 3602 7.912250 GCATGTAGAAATTAAGAGGAACATGTG 59.088 37.037 17.32 3.68 42.96 3.21
3350 3603 7.201644 CGCATGTAGAAATTAAGAGGAACATGT 60.202 37.037 17.32 0.00 42.96 3.21
3351 3604 7.128331 CGCATGTAGAAATTAAGAGGAACATG 58.872 38.462 14.16 14.16 43.54 3.21
3352 3605 6.238484 GCGCATGTAGAAATTAAGAGGAACAT 60.238 38.462 0.30 0.00 0.00 2.71
3353 3606 5.064707 GCGCATGTAGAAATTAAGAGGAACA 59.935 40.000 0.30 0.00 0.00 3.18
3354 3607 5.294552 AGCGCATGTAGAAATTAAGAGGAAC 59.705 40.000 11.47 0.00 0.00 3.62
3355 3608 5.428253 AGCGCATGTAGAAATTAAGAGGAA 58.572 37.500 11.47 0.00 0.00 3.36
3356 3609 5.023533 AGCGCATGTAGAAATTAAGAGGA 57.976 39.130 11.47 0.00 0.00 3.71
3357 3610 5.741388 AAGCGCATGTAGAAATTAAGAGG 57.259 39.130 11.47 0.00 0.00 3.69
3358 3611 6.201806 AGCTAAGCGCATGTAGAAATTAAGAG 59.798 38.462 11.47 0.00 42.61 2.85
3359 3612 6.049149 AGCTAAGCGCATGTAGAAATTAAGA 58.951 36.000 11.47 0.00 42.61 2.10
3360 3613 6.018751 TGAGCTAAGCGCATGTAGAAATTAAG 60.019 38.462 11.47 0.00 42.61 1.85
3361 3614 5.815222 TGAGCTAAGCGCATGTAGAAATTAA 59.185 36.000 11.47 0.00 42.61 1.40
3362 3615 5.356426 TGAGCTAAGCGCATGTAGAAATTA 58.644 37.500 11.47 0.00 42.61 1.40
3363 3616 4.191544 TGAGCTAAGCGCATGTAGAAATT 58.808 39.130 11.47 0.00 42.61 1.82
3364 3617 3.797039 TGAGCTAAGCGCATGTAGAAAT 58.203 40.909 11.47 0.00 42.61 2.17
3365 3618 3.245518 TGAGCTAAGCGCATGTAGAAA 57.754 42.857 11.47 0.00 42.61 2.52
3366 3619 2.959507 TGAGCTAAGCGCATGTAGAA 57.040 45.000 11.47 0.00 42.61 2.10
3373 3626 0.462581 CCTCCAATGAGCTAAGCGCA 60.463 55.000 11.47 0.00 43.16 6.09
3374 3627 0.462759 ACCTCCAATGAGCTAAGCGC 60.463 55.000 0.00 0.00 37.29 5.92
3375 3628 1.667724 CAACCTCCAATGAGCTAAGCG 59.332 52.381 0.00 0.00 37.29 4.68
3376 3629 2.019984 CCAACCTCCAATGAGCTAAGC 58.980 52.381 0.00 0.00 37.29 3.09
3377 3630 2.025887 ACCCAACCTCCAATGAGCTAAG 60.026 50.000 0.00 0.00 37.29 2.18
3378 3631 1.992557 ACCCAACCTCCAATGAGCTAA 59.007 47.619 0.00 0.00 37.29 3.09
3379 3632 1.668826 ACCCAACCTCCAATGAGCTA 58.331 50.000 0.00 0.00 37.29 3.32
3380 3633 1.668826 TACCCAACCTCCAATGAGCT 58.331 50.000 0.00 0.00 37.29 4.09
3381 3634 2.507407 TTACCCAACCTCCAATGAGC 57.493 50.000 0.00 0.00 37.29 4.26
3382 3635 6.889722 TCTTTAATTACCCAACCTCCAATGAG 59.110 38.462 0.00 0.00 38.42 2.90
3383 3636 6.795590 TCTTTAATTACCCAACCTCCAATGA 58.204 36.000 0.00 0.00 0.00 2.57
3384 3637 6.096846 CCTCTTTAATTACCCAACCTCCAATG 59.903 42.308 0.00 0.00 0.00 2.82
3385 3638 6.011096 TCCTCTTTAATTACCCAACCTCCAAT 60.011 38.462 0.00 0.00 0.00 3.16
3386 3639 5.313772 TCCTCTTTAATTACCCAACCTCCAA 59.686 40.000 0.00 0.00 0.00 3.53
3387 3640 4.853276 TCCTCTTTAATTACCCAACCTCCA 59.147 41.667 0.00 0.00 0.00 3.86
3388 3641 5.191124 TCTCCTCTTTAATTACCCAACCTCC 59.809 44.000 0.00 0.00 0.00 4.30
3389 3642 6.114089 GTCTCCTCTTTAATTACCCAACCTC 58.886 44.000 0.00 0.00 0.00 3.85
3390 3643 5.550403 TGTCTCCTCTTTAATTACCCAACCT 59.450 40.000 0.00 0.00 0.00 3.50
3391 3644 5.812286 TGTCTCCTCTTTAATTACCCAACC 58.188 41.667 0.00 0.00 0.00 3.77
3392 3645 6.708285 TCTGTCTCCTCTTTAATTACCCAAC 58.292 40.000 0.00 0.00 0.00 3.77
3393 3646 6.945636 TCTGTCTCCTCTTTAATTACCCAA 57.054 37.500 0.00 0.00 0.00 4.12
3394 3647 6.126768 CCATCTGTCTCCTCTTTAATTACCCA 60.127 42.308 0.00 0.00 0.00 4.51
3395 3648 6.126739 ACCATCTGTCTCCTCTTTAATTACCC 60.127 42.308 0.00 0.00 0.00 3.69
3396 3649 6.763610 CACCATCTGTCTCCTCTTTAATTACC 59.236 42.308 0.00 0.00 0.00 2.85
3397 3650 6.763610 CCACCATCTGTCTCCTCTTTAATTAC 59.236 42.308 0.00 0.00 0.00 1.89
3398 3651 6.632672 GCCACCATCTGTCTCCTCTTTAATTA 60.633 42.308 0.00 0.00 0.00 1.40
3399 3652 5.749462 CCACCATCTGTCTCCTCTTTAATT 58.251 41.667 0.00 0.00 0.00 1.40
3400 3653 4.384647 GCCACCATCTGTCTCCTCTTTAAT 60.385 45.833 0.00 0.00 0.00 1.40
3401 3654 3.055094 GCCACCATCTGTCTCCTCTTTAA 60.055 47.826 0.00 0.00 0.00 1.52
3402 3655 2.501723 GCCACCATCTGTCTCCTCTTTA 59.498 50.000 0.00 0.00 0.00 1.85
3403 3656 1.280421 GCCACCATCTGTCTCCTCTTT 59.720 52.381 0.00 0.00 0.00 2.52
3404 3657 0.908198 GCCACCATCTGTCTCCTCTT 59.092 55.000 0.00 0.00 0.00 2.85
3405 3658 0.042431 AGCCACCATCTGTCTCCTCT 59.958 55.000 0.00 0.00 0.00 3.69
3406 3659 0.908198 AAGCCACCATCTGTCTCCTC 59.092 55.000 0.00 0.00 0.00 3.71
3407 3660 0.617413 CAAGCCACCATCTGTCTCCT 59.383 55.000 0.00 0.00 0.00 3.69
3408 3661 1.028868 GCAAGCCACCATCTGTCTCC 61.029 60.000 0.00 0.00 0.00 3.71
3409 3662 1.364626 CGCAAGCCACCATCTGTCTC 61.365 60.000 0.00 0.00 0.00 3.36
3410 3663 1.376424 CGCAAGCCACCATCTGTCT 60.376 57.895 0.00 0.00 0.00 3.41
3411 3664 3.181367 CGCAAGCCACCATCTGTC 58.819 61.111 0.00 0.00 0.00 3.51
3464 3717 9.871238 GAGTGTACATCTAGAAATTTTAGGACA 57.129 33.333 0.00 0.00 0.00 4.02
3470 3723 9.220767 GGTGAAGAGTGTACATCTAGAAATTTT 57.779 33.333 0.00 0.00 0.00 1.82
3471 3724 7.545965 CGGTGAAGAGTGTACATCTAGAAATTT 59.454 37.037 0.00 0.00 0.00 1.82
3472 3725 7.036220 CGGTGAAGAGTGTACATCTAGAAATT 58.964 38.462 0.00 0.00 0.00 1.82
3473 3726 6.405953 CCGGTGAAGAGTGTACATCTAGAAAT 60.406 42.308 0.00 0.00 0.00 2.17
3474 3727 5.105877 CCGGTGAAGAGTGTACATCTAGAAA 60.106 44.000 0.00 0.00 0.00 2.52
3475 3728 4.398358 CCGGTGAAGAGTGTACATCTAGAA 59.602 45.833 0.00 0.00 0.00 2.10
3476 3729 3.945921 CCGGTGAAGAGTGTACATCTAGA 59.054 47.826 0.00 0.00 0.00 2.43
3477 3730 3.945921 TCCGGTGAAGAGTGTACATCTAG 59.054 47.826 0.00 0.00 0.00 2.43
3478 3731 3.693085 GTCCGGTGAAGAGTGTACATCTA 59.307 47.826 0.00 0.00 0.00 1.98
3479 3732 2.492484 GTCCGGTGAAGAGTGTACATCT 59.508 50.000 0.00 0.27 0.00 2.90
3480 3733 2.731341 CGTCCGGTGAAGAGTGTACATC 60.731 54.545 0.00 0.00 0.00 3.06
3481 3734 1.201647 CGTCCGGTGAAGAGTGTACAT 59.798 52.381 0.00 0.00 0.00 2.29
3482 3735 0.594602 CGTCCGGTGAAGAGTGTACA 59.405 55.000 0.00 0.00 0.00 2.90
3483 3736 0.109412 CCGTCCGGTGAAGAGTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
3484 3737 0.250858 TCCGTCCGGTGAAGAGTGTA 60.251 55.000 0.00 0.00 36.47 2.90
3485 3738 1.524863 CTCCGTCCGGTGAAGAGTGT 61.525 60.000 0.00 0.00 36.47 3.55
3486 3739 1.213013 CTCCGTCCGGTGAAGAGTG 59.787 63.158 0.00 0.00 36.47 3.51
3487 3740 1.977544 CCTCCGTCCGGTGAAGAGT 60.978 63.158 0.00 0.00 36.47 3.24
3488 3741 1.248785 TTCCTCCGTCCGGTGAAGAG 61.249 60.000 0.00 3.95 36.47 2.85
3489 3742 1.228644 TTCCTCCGTCCGGTGAAGA 60.229 57.895 0.00 0.00 36.47 2.87
3490 3743 1.215647 CTTCCTCCGTCCGGTGAAG 59.784 63.158 18.77 18.77 38.13 3.02
3491 3744 0.251297 TACTTCCTCCGTCCGGTGAA 60.251 55.000 0.00 10.30 36.47 3.18
3492 3745 0.251297 TTACTTCCTCCGTCCGGTGA 60.251 55.000 0.00 3.39 36.47 4.02
3493 3746 0.172803 CTTACTTCCTCCGTCCGGTG 59.827 60.000 0.00 3.10 36.47 4.94
3494 3747 0.251519 ACTTACTTCCTCCGTCCGGT 60.252 55.000 0.00 0.00 36.47 5.28
3495 3748 1.755179 TACTTACTTCCTCCGTCCGG 58.245 55.000 0.00 0.00 0.00 5.14
3496 3749 4.382345 AATTACTTACTTCCTCCGTCCG 57.618 45.455 0.00 0.00 0.00 4.79
3497 3750 5.163478 TGCTAATTACTTACTTCCTCCGTCC 60.163 44.000 0.00 0.00 0.00 4.79
3498 3751 5.747675 GTGCTAATTACTTACTTCCTCCGTC 59.252 44.000 0.00 0.00 0.00 4.79
3499 3752 5.394993 GGTGCTAATTACTTACTTCCTCCGT 60.395 44.000 0.00 0.00 0.00 4.69
3500 3753 5.048507 GGTGCTAATTACTTACTTCCTCCG 58.951 45.833 0.00 0.00 0.00 4.63
3501 3754 5.985911 TGGTGCTAATTACTTACTTCCTCC 58.014 41.667 0.00 0.00 0.00 4.30
3502 3755 7.065923 CCTTTGGTGCTAATTACTTACTTCCTC 59.934 40.741 0.00 0.00 0.00 3.71
3503 3756 6.884836 CCTTTGGTGCTAATTACTTACTTCCT 59.115 38.462 0.00 0.00 0.00 3.36
3504 3757 6.882678 TCCTTTGGTGCTAATTACTTACTTCC 59.117 38.462 0.00 0.00 0.00 3.46
3505 3758 7.916914 TCCTTTGGTGCTAATTACTTACTTC 57.083 36.000 0.00 0.00 0.00 3.01
3506 3759 7.094334 GCTTCCTTTGGTGCTAATTACTTACTT 60.094 37.037 0.00 0.00 0.00 2.24
3507 3760 6.374613 GCTTCCTTTGGTGCTAATTACTTACT 59.625 38.462 0.00 0.00 0.00 2.24
3508 3761 6.552629 GCTTCCTTTGGTGCTAATTACTTAC 58.447 40.000 0.00 0.00 0.00 2.34
3509 3762 5.353123 CGCTTCCTTTGGTGCTAATTACTTA 59.647 40.000 0.00 0.00 0.00 2.24
3510 3763 4.156008 CGCTTCCTTTGGTGCTAATTACTT 59.844 41.667 0.00 0.00 0.00 2.24
3511 3764 3.689649 CGCTTCCTTTGGTGCTAATTACT 59.310 43.478 0.00 0.00 0.00 2.24
3512 3765 3.687698 TCGCTTCCTTTGGTGCTAATTAC 59.312 43.478 0.00 0.00 0.00 1.89
3513 3766 3.945346 TCGCTTCCTTTGGTGCTAATTA 58.055 40.909 0.00 0.00 0.00 1.40
3514 3767 2.790433 TCGCTTCCTTTGGTGCTAATT 58.210 42.857 0.00 0.00 0.00 1.40
3515 3768 2.489938 TCGCTTCCTTTGGTGCTAAT 57.510 45.000 0.00 0.00 0.00 1.73
3516 3769 2.083774 CATCGCTTCCTTTGGTGCTAA 58.916 47.619 0.00 0.00 0.00 3.09
3517 3770 1.277842 TCATCGCTTCCTTTGGTGCTA 59.722 47.619 0.00 0.00 0.00 3.49
3518 3771 0.036732 TCATCGCTTCCTTTGGTGCT 59.963 50.000 0.00 0.00 0.00 4.40
3519 3772 1.098050 ATCATCGCTTCCTTTGGTGC 58.902 50.000 0.00 0.00 0.00 5.01
3520 3773 6.808008 AATATATCATCGCTTCCTTTGGTG 57.192 37.500 0.00 0.00 0.00 4.17
3521 3774 8.784043 GTTTAATATATCATCGCTTCCTTTGGT 58.216 33.333 0.00 0.00 0.00 3.67
3522 3775 7.957484 CGTTTAATATATCATCGCTTCCTTTGG 59.043 37.037 0.00 0.00 0.00 3.28
3523 3776 7.478667 GCGTTTAATATATCATCGCTTCCTTTG 59.521 37.037 13.34 0.00 39.26 2.77
3524 3777 7.172532 TGCGTTTAATATATCATCGCTTCCTTT 59.827 33.333 18.05 0.00 42.11 3.11
3525 3778 6.649141 TGCGTTTAATATATCATCGCTTCCTT 59.351 34.615 18.05 0.00 42.11 3.36
3526 3779 6.163476 TGCGTTTAATATATCATCGCTTCCT 58.837 36.000 18.05 0.00 42.11 3.36
3527 3780 6.403333 TGCGTTTAATATATCATCGCTTCC 57.597 37.500 18.05 0.54 42.11 3.46
3528 3781 7.510630 ACTTGCGTTTAATATATCATCGCTTC 58.489 34.615 18.05 0.77 42.11 3.86
3529 3782 7.385205 AGACTTGCGTTTAATATATCATCGCTT 59.615 33.333 18.05 8.51 42.11 4.68
3530 3783 6.868864 AGACTTGCGTTTAATATATCATCGCT 59.131 34.615 18.05 5.77 42.11 4.93
3531 3784 6.950428 CAGACTTGCGTTTAATATATCATCGC 59.050 38.462 13.58 13.58 41.98 4.58
3532 3785 6.950428 GCAGACTTGCGTTTAATATATCATCG 59.050 38.462 0.00 0.00 41.13 3.84
3549 3802 6.304356 TCATTTTACTTCACAGCAGACTTG 57.696 37.500 0.00 0.00 0.00 3.16
3550 3803 7.516198 AATCATTTTACTTCACAGCAGACTT 57.484 32.000 0.00 0.00 0.00 3.01
3551 3804 7.661437 TGTAATCATTTTACTTCACAGCAGACT 59.339 33.333 0.00 0.00 0.00 3.24
3552 3805 7.746475 GTGTAATCATTTTACTTCACAGCAGAC 59.254 37.037 0.00 0.00 0.00 3.51
3553 3806 7.443879 TGTGTAATCATTTTACTTCACAGCAGA 59.556 33.333 0.00 0.00 32.21 4.26
3554 3807 7.584108 TGTGTAATCATTTTACTTCACAGCAG 58.416 34.615 0.00 0.00 32.21 4.24
3555 3808 7.503521 TGTGTAATCATTTTACTTCACAGCA 57.496 32.000 0.00 0.00 32.21 4.41
3556 3809 8.795786 TTTGTGTAATCATTTTACTTCACAGC 57.204 30.769 0.00 0.00 36.27 4.40
3575 3828 9.979578 TGAAATTCTGCTTTGTATTATTTGTGT 57.020 25.926 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.