Multiple sequence alignment - TraesCS7A01G479700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G479700 chr7A 100.000 4181 0 0 1 4181 672020088 672024268 0.000000e+00 7721.0
1 TraesCS7A01G479700 chr7A 95.662 2651 71 25 814 3443 672016386 672013759 0.000000e+00 4218.0
2 TraesCS7A01G479700 chr7A 85.759 955 73 18 2174 3084 39202323 39201388 0.000000e+00 952.0
3 TraesCS7A01G479700 chr7A 89.767 215 18 3 1796 2009 39202693 39202482 5.330000e-69 272.0
4 TraesCS7A01G479700 chr7A 89.189 148 9 4 186 331 672017043 672016901 1.190000e-40 178.0
5 TraesCS7A01G479700 chr7A 89.362 141 7 2 4049 4181 555661992 555661852 2.000000e-38 171.0
6 TraesCS7A01G479700 chr7A 94.667 75 2 2 3756 3830 672023770 672023842 9.500000e-22 115.0
7 TraesCS7A01G479700 chr7A 94.667 75 2 2 3683 3755 672023843 672023917 9.500000e-22 115.0
8 TraesCS7A01G479700 chr7B 92.943 1077 59 8 2174 3237 647753224 647754296 0.000000e+00 1552.0
9 TraesCS7A01G479700 chr7B 84.580 655 59 23 787 1421 647751935 647752567 2.760000e-171 612.0
10 TraesCS7A01G479700 chr7B 92.776 263 14 1 1743 2000 647752860 647753122 3.950000e-100 375.0
11 TraesCS7A01G479700 chr7B 89.180 305 21 9 3756 4053 647755597 647755896 1.840000e-98 370.0
12 TraesCS7A01G479700 chr7B 78.487 595 58 29 78 636 647751291 647751851 4.030000e-85 326.0
13 TraesCS7A01G479700 chr7B 97.546 163 4 0 1458 1620 647752655 647752817 3.180000e-71 279.0
14 TraesCS7A01G479700 chr7B 93.642 173 8 3 3586 3755 647755497 647755669 5.360000e-64 255.0
15 TraesCS7A01G479700 chr7B 95.876 97 4 0 2076 2172 548474778 548474874 1.560000e-34 158.0
16 TraesCS7A01G479700 chr7B 84.375 160 20 2 113 272 647453104 647453258 7.240000e-33 152.0
17 TraesCS7A01G479700 chr7B 93.000 100 6 1 1163 1262 647154190 647154092 1.210000e-30 145.0
18 TraesCS7A01G479700 chr7B 85.714 133 12 4 874 1005 647422461 647422335 2.620000e-27 134.0
19 TraesCS7A01G479700 chr7B 93.750 80 5 0 1622 1701 383714714 383714635 2.040000e-23 121.0
20 TraesCS7A01G479700 chr7B 93.750 80 5 0 1622 1701 436210813 436210892 2.040000e-23 121.0
21 TraesCS7A01G479700 chr7D 89.671 1094 57 26 2174 3238 580492523 580493589 0.000000e+00 1343.0
22 TraesCS7A01G479700 chr7D 92.857 644 36 7 2441 3084 580482191 580481558 0.000000e+00 926.0
23 TraesCS7A01G479700 chr7D 89.537 583 26 14 1043 1622 580483529 580482979 0.000000e+00 706.0
24 TraesCS7A01G479700 chr7D 94.040 302 10 2 1011 1312 580491414 580491707 6.370000e-123 451.0
25 TraesCS7A01G479700 chr7D 93.254 252 8 4 1761 2003 580482960 580482709 3.070000e-96 363.0
26 TraesCS7A01G479700 chr7D 79.195 596 48 35 113 668 580489961 580490520 1.110000e-90 344.0
27 TraesCS7A01G479700 chr7D 88.612 281 16 4 2174 2444 580482665 580482391 1.120000e-85 327.0
28 TraesCS7A01G479700 chr7D 85.809 303 20 12 3756 4052 580494679 580494964 2.440000e-77 300.0
29 TraesCS7A01G479700 chr7D 79.592 490 38 32 134 598 580484484 580484032 1.140000e-75 294.0
30 TraesCS7A01G479700 chr7D 90.351 228 13 4 1791 2013 580492091 580492314 1.470000e-74 291.0
31 TraesCS7A01G479700 chr7D 93.605 172 11 0 1451 1622 580491859 580492030 1.490000e-64 257.0
32 TraesCS7A01G479700 chr7D 91.329 173 12 3 3586 3755 580494579 580494751 2.510000e-57 233.0
33 TraesCS7A01G479700 chr7D 79.620 368 27 22 654 998 580484056 580483714 1.960000e-53 220.0
34 TraesCS7A01G479700 chr7D 97.959 98 2 0 2076 2173 607220843 607220940 2.000000e-38 171.0
35 TraesCS7A01G479700 chr7D 88.060 134 11 2 4050 4178 137567858 137567991 2.010000e-33 154.0
36 TraesCS7A01G479700 chr7D 87.500 136 11 3 4052 4181 217794084 217793949 7.240000e-33 152.0
37 TraesCS7A01G479700 chr1D 84.502 271 25 7 3264 3534 421076277 421076530 6.940000e-63 252.0
38 TraesCS7A01G479700 chr1D 85.714 84 12 0 3143 3226 23973934 23973851 5.760000e-14 89.8
39 TraesCS7A01G479700 chr3B 90.303 165 15 1 3264 3427 752212191 752212355 9.100000e-52 215.0
40 TraesCS7A01G479700 chr3B 87.786 131 15 1 4052 4181 476040157 476040027 7.240000e-33 152.0
41 TraesCS7A01G479700 chr6D 90.625 128 11 1 4052 4178 419422594 419422721 7.190000e-38 169.0
42 TraesCS7A01G479700 chr6D 89.394 132 9 1 4052 4178 109824723 109824854 1.200000e-35 161.0
43 TraesCS7A01G479700 chr6D 92.857 84 6 0 1622 1705 27710091 27710008 5.680000e-24 122.0
44 TraesCS7A01G479700 chr6D 86.538 104 11 2 3122 3224 292029069 292029170 1.230000e-20 111.0
45 TraesCS7A01G479700 chr5B 96.875 96 3 0 2076 2171 579371701 579371796 1.200000e-35 161.0
46 TraesCS7A01G479700 chr5B 88.235 136 10 2 4048 4178 559994934 559995068 1.560000e-34 158.0
47 TraesCS7A01G479700 chr5B 92.593 81 6 0 1622 1702 146916510 146916590 2.640000e-22 117.0
48 TraesCS7A01G479700 chr5D 95.960 99 3 1 2076 2173 402739319 402739221 4.330000e-35 159.0
49 TraesCS7A01G479700 chr5D 93.671 79 5 0 1622 1700 396814110 396814188 7.340000e-23 119.0
50 TraesCS7A01G479700 chr2B 87.857 140 11 1 4048 4181 772372518 772372379 4.330000e-35 159.0
51 TraesCS7A01G479700 chr2B 90.244 123 8 2 4063 4181 543381183 543381061 1.560000e-34 158.0
52 TraesCS7A01G479700 chr2B 95.876 97 4 0 2076 2172 673627924 673628020 1.560000e-34 158.0
53 TraesCS7A01G479700 chr6B 95.876 97 4 0 2076 2172 695159099 695159195 1.560000e-34 158.0
54 TraesCS7A01G479700 chr6B 92.771 83 6 0 1623 1705 535451678 535451596 2.040000e-23 121.0
55 TraesCS7A01G479700 chr3D 95.876 97 4 0 2076 2172 560115755 560115659 1.560000e-34 158.0
56 TraesCS7A01G479700 chr4B 93.333 105 5 2 2076 2180 579627398 579627296 2.010000e-33 154.0
57 TraesCS7A01G479700 chr4B 93.750 80 5 0 1622 1701 161519195 161519274 2.040000e-23 121.0
58 TraesCS7A01G479700 chr4B 91.765 85 7 0 1622 1706 45408096 45408012 7.340000e-23 119.0
59 TraesCS7A01G479700 chr4A 84.211 95 15 0 3131 3225 698879134 698879228 4.450000e-15 93.5
60 TraesCS7A01G479700 chr2D 81.553 103 19 0 3122 3224 544872894 544872792 7.450000e-13 86.1
61 TraesCS7A01G479700 chr1A 84.524 84 13 0 3132 3215 478426817 478426900 2.680000e-12 84.2
62 TraesCS7A01G479700 chr3A 81.818 88 16 0 3152 3239 71806322 71806235 1.610000e-09 75.0
63 TraesCS7A01G479700 chr3A 77.966 118 26 0 3122 3239 71866145 71866262 1.610000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G479700 chr7A 672020088 672024268 4180 False 2650.333333 7721 96.444667 1 4181 3 chr7A.!!$F1 4180
1 TraesCS7A01G479700 chr7A 672013759 672017043 3284 True 2198.000000 4218 92.425500 186 3443 2 chr7A.!!$R3 3257
2 TraesCS7A01G479700 chr7A 39201388 39202693 1305 True 612.000000 952 87.763000 1796 3084 2 chr7A.!!$R2 1288
3 TraesCS7A01G479700 chr7B 647751291 647755896 4605 False 538.428571 1552 89.879143 78 4053 7 chr7B.!!$F4 3975
4 TraesCS7A01G479700 chr7D 580481558 580484484 2926 True 472.666667 926 87.245333 134 3084 6 chr7D.!!$R2 2950
5 TraesCS7A01G479700 chr7D 580489961 580494964 5003 False 459.857143 1343 89.142857 113 4052 7 chr7D.!!$F3 3939

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.036765 ACTTAAACTGATCGCCGGCA 60.037 50.000 28.98 14.46 0.00 5.69 F
456 1230 0.454600 GTGAACTCGATCTACCGCCA 59.545 55.000 0.00 0.00 0.00 5.69 F
1037 2130 0.732880 CGTCGTCGCAAAGGTCAGAT 60.733 55.000 0.00 0.00 0.00 2.90 F
1038 2131 1.466866 CGTCGTCGCAAAGGTCAGATA 60.467 52.381 0.00 0.00 0.00 1.98 F
2934 4497 1.075979 CATGTTCGTCGTCGCCATGA 61.076 55.000 20.69 0.00 42.67 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1004 1927 1.138036 CGACGACGGTGCAGGATTA 59.862 57.895 0.00 0.0 35.72 1.75 R
1281 2374 1.633945 GGACAATTGACCTACCTGGGT 59.366 52.381 18.18 0.0 43.07 4.51 R
2934 4497 4.101448 GGAGGCCATGAGCACGGT 62.101 66.667 5.01 0.0 46.50 4.83 R
3133 4715 4.036498 ACTTCCGACGAACTTCGATCATAT 59.964 41.667 17.97 0.0 43.74 1.78 R
3774 6531 0.107557 GGCATTGATGGCCCAAAAGG 60.108 55.000 0.00 0.0 45.87 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.864343 CGGCCCTTACTTAAACTGATCG 59.136 50.000 0.00 0.00 0.00 3.69
22 23 2.612672 GGCCCTTACTTAAACTGATCGC 59.387 50.000 0.00 0.00 0.00 4.58
23 24 2.612672 GCCCTTACTTAAACTGATCGCC 59.387 50.000 0.00 0.00 0.00 5.54
24 25 2.864343 CCCTTACTTAAACTGATCGCCG 59.136 50.000 0.00 0.00 0.00 6.46
25 26 2.864343 CCTTACTTAAACTGATCGCCGG 59.136 50.000 0.00 0.00 0.00 6.13
26 27 1.930567 TACTTAAACTGATCGCCGGC 58.069 50.000 19.07 19.07 0.00 6.13
27 28 0.036765 ACTTAAACTGATCGCCGGCA 60.037 50.000 28.98 14.46 0.00 5.69
28 29 1.299541 CTTAAACTGATCGCCGGCAT 58.700 50.000 28.98 18.88 0.00 4.40
29 30 2.159014 ACTTAAACTGATCGCCGGCATA 60.159 45.455 28.98 14.85 0.00 3.14
30 31 2.831685 TAAACTGATCGCCGGCATAT 57.168 45.000 28.98 19.48 0.00 1.78
31 32 1.229428 AAACTGATCGCCGGCATATG 58.771 50.000 28.98 14.23 0.00 1.78
32 33 1.230635 AACTGATCGCCGGCATATGC 61.231 55.000 28.98 19.79 41.14 3.14
39 40 2.089854 GCCGGCATATGCGATTAGG 58.910 57.895 24.80 17.85 43.26 2.69
40 41 0.673644 GCCGGCATATGCGATTAGGT 60.674 55.000 24.80 0.00 43.26 3.08
41 42 1.404986 GCCGGCATATGCGATTAGGTA 60.405 52.381 24.80 0.00 43.26 3.08
42 43 2.268298 CCGGCATATGCGATTAGGTAC 58.732 52.381 21.04 3.36 43.26 3.34
43 44 1.917955 CGGCATATGCGATTAGGTACG 59.082 52.381 21.04 11.58 43.26 3.67
44 45 2.670229 CGGCATATGCGATTAGGTACGT 60.670 50.000 21.04 0.00 43.26 3.57
45 46 3.426560 CGGCATATGCGATTAGGTACGTA 60.427 47.826 21.04 0.00 43.26 3.57
46 47 4.103357 GGCATATGCGATTAGGTACGTAG 58.897 47.826 21.04 0.00 43.26 3.51
47 48 3.546670 GCATATGCGATTAGGTACGTAGC 59.453 47.826 16.85 16.85 0.00 3.58
48 49 4.674623 GCATATGCGATTAGGTACGTAGCT 60.675 45.833 28.36 28.36 37.80 3.32
49 50 2.768833 TGCGATTAGGTACGTAGCTG 57.231 50.000 31.93 18.75 35.39 4.24
50 51 2.019249 TGCGATTAGGTACGTAGCTGT 58.981 47.619 31.93 21.86 35.39 4.40
51 52 2.223409 TGCGATTAGGTACGTAGCTGTG 60.223 50.000 31.93 20.30 35.39 3.66
52 53 2.857489 GCGATTAGGTACGTAGCTGTGG 60.857 54.545 31.93 22.34 35.39 4.17
53 54 2.740452 GATTAGGTACGTAGCTGTGGC 58.260 52.381 31.93 17.02 35.39 5.01
68 69 4.537433 GGCTCGGCGGCATCTCTT 62.537 66.667 19.19 0.00 38.25 2.85
69 70 2.964389 GCTCGGCGGCATCTCTTC 60.964 66.667 10.53 0.00 0.00 2.87
70 71 2.811101 CTCGGCGGCATCTCTTCT 59.189 61.111 10.53 0.00 0.00 2.85
71 72 1.299773 CTCGGCGGCATCTCTTCTC 60.300 63.158 10.53 0.00 0.00 2.87
72 73 1.733402 CTCGGCGGCATCTCTTCTCT 61.733 60.000 10.53 0.00 0.00 3.10
73 74 1.299773 CGGCGGCATCTCTTCTCTC 60.300 63.158 10.53 0.00 0.00 3.20
74 75 1.068921 GGCGGCATCTCTTCTCTCC 59.931 63.158 3.07 0.00 0.00 3.71
75 76 1.398958 GGCGGCATCTCTTCTCTCCT 61.399 60.000 3.07 0.00 0.00 3.69
76 77 1.323412 GCGGCATCTCTTCTCTCCTA 58.677 55.000 0.00 0.00 0.00 2.94
79 80 2.161410 CGGCATCTCTTCTCTCCTATCG 59.839 54.545 0.00 0.00 0.00 2.92
88 89 3.128852 TCTCTCCTATCGTGTCCTAGC 57.871 52.381 0.00 0.00 0.00 3.42
109 110 4.112634 GCTGTGATCGAGTTGCAGTATTA 58.887 43.478 0.00 0.00 0.00 0.98
111 112 5.235186 GCTGTGATCGAGTTGCAGTATTATT 59.765 40.000 0.00 0.00 0.00 1.40
179 187 3.505386 TGTATTGTTTGGATGGTGGCTT 58.495 40.909 0.00 0.00 0.00 4.35
184 192 1.202348 GTTTGGATGGTGGCTTGCTAC 59.798 52.381 0.31 0.31 0.00 3.58
320 339 2.224079 CCAGAGACACCACAAACATTCG 59.776 50.000 0.00 0.00 0.00 3.34
364 1138 1.070445 ACACACTCTGGTGCTCAGC 59.930 57.895 0.00 0.00 46.57 4.26
388 1162 4.494350 TCAGCAAGAACAGCTTCATTTC 57.506 40.909 0.00 0.00 41.14 2.17
389 1163 3.058708 TCAGCAAGAACAGCTTCATTTCG 60.059 43.478 0.00 0.00 41.14 3.46
390 1164 3.058708 CAGCAAGAACAGCTTCATTTCGA 60.059 43.478 0.00 0.00 41.14 3.71
391 1165 3.755378 AGCAAGAACAGCTTCATTTCGAT 59.245 39.130 0.00 0.00 39.87 3.59
392 1166 4.094212 GCAAGAACAGCTTCATTTCGATC 58.906 43.478 0.00 0.00 33.60 3.69
393 1167 4.329489 CAAGAACAGCTTCATTTCGATCG 58.671 43.478 9.36 9.36 33.60 3.69
395 1169 2.386661 ACAGCTTCATTTCGATCGGT 57.613 45.000 16.41 0.00 0.00 4.69
396 1170 2.002586 ACAGCTTCATTTCGATCGGTG 58.997 47.619 16.41 11.95 0.00 4.94
399 1173 2.093973 AGCTTCATTTCGATCGGTGACT 60.094 45.455 16.41 8.82 0.00 3.41
401 1175 1.640428 TCATTTCGATCGGTGACTGC 58.360 50.000 16.41 0.00 0.00 4.40
402 1176 0.652592 CATTTCGATCGGTGACTGCC 59.347 55.000 16.41 0.00 0.00 4.85
414 1188 2.280628 GTGACTGCCTAACTGGTATGC 58.719 52.381 0.00 0.00 38.35 3.14
415 1189 1.905894 TGACTGCCTAACTGGTATGCA 59.094 47.619 2.73 2.73 38.35 3.96
416 1190 2.505407 TGACTGCCTAACTGGTATGCAT 59.495 45.455 3.79 3.79 33.49 3.96
417 1191 3.134458 GACTGCCTAACTGGTATGCATC 58.866 50.000 0.19 0.00 33.49 3.91
418 1192 2.774234 ACTGCCTAACTGGTATGCATCT 59.226 45.455 0.19 0.00 33.49 2.90
419 1193 3.200825 ACTGCCTAACTGGTATGCATCTT 59.799 43.478 0.19 0.00 33.49 2.40
420 1194 4.408921 ACTGCCTAACTGGTATGCATCTTA 59.591 41.667 0.19 0.00 33.49 2.10
421 1195 4.960938 TGCCTAACTGGTATGCATCTTAG 58.039 43.478 0.19 2.25 38.35 2.18
422 1196 3.748568 GCCTAACTGGTATGCATCTTAGC 59.251 47.826 0.19 0.00 38.35 3.09
423 1197 4.743651 GCCTAACTGGTATGCATCTTAGCA 60.744 45.833 0.19 0.27 43.08 3.49
437 1211 2.674852 TCTTAGCAAGCATCTGAAAGCG 59.325 45.455 0.00 0.00 35.48 4.68
445 1219 1.201855 GCATCTGAAAGCGTGAACTCG 60.202 52.381 0.00 0.00 0.00 4.18
449 1223 2.229062 TCTGAAAGCGTGAACTCGATCT 59.771 45.455 0.57 0.00 0.00 2.75
456 1230 0.454600 GTGAACTCGATCTACCGCCA 59.545 55.000 0.00 0.00 0.00 5.69
457 1231 0.454600 TGAACTCGATCTACCGCCAC 59.545 55.000 0.00 0.00 0.00 5.01
485 1259 5.981315 TGCTCTTTCTCAAGCAATTTTCTTG 59.019 36.000 9.76 9.76 45.09 3.02
486 1260 5.107568 GCTCTTTCTCAAGCAATTTTCTTGC 60.108 40.000 10.77 1.78 45.22 4.01
497 1271 6.348621 GCAATTTTCTTGCTCTTTTCAACA 57.651 33.333 2.81 0.00 41.87 3.33
498 1272 6.187480 GCAATTTTCTTGCTCTTTTCAACAC 58.813 36.000 2.81 0.00 41.87 3.32
499 1273 6.036408 GCAATTTTCTTGCTCTTTTCAACACT 59.964 34.615 2.81 0.00 41.87 3.55
500 1274 7.222611 GCAATTTTCTTGCTCTTTTCAACACTA 59.777 33.333 2.81 0.00 41.87 2.74
501 1275 8.749499 CAATTTTCTTGCTCTTTTCAACACTAG 58.251 33.333 0.00 0.00 0.00 2.57
502 1276 5.424121 TTCTTGCTCTTTTCAACACTAGC 57.576 39.130 0.00 0.00 0.00 3.42
503 1277 4.450976 TCTTGCTCTTTTCAACACTAGCA 58.549 39.130 0.00 0.00 38.14 3.49
504 1278 4.273480 TCTTGCTCTTTTCAACACTAGCAC 59.727 41.667 0.00 0.00 39.50 4.40
505 1279 3.540617 TGCTCTTTTCAACACTAGCACA 58.459 40.909 0.00 0.00 35.20 4.57
506 1280 3.561310 TGCTCTTTTCAACACTAGCACAG 59.439 43.478 0.00 0.00 35.20 3.66
529 1303 2.397549 GTGATTTGCTTGGCTGTTCAC 58.602 47.619 0.00 0.00 0.00 3.18
564 1347 5.101628 TGACAAAAGAACATGCAAGAACAC 58.898 37.500 0.00 0.00 0.00 3.32
565 1348 5.105797 TGACAAAAGAACATGCAAGAACACT 60.106 36.000 0.00 0.00 0.00 3.55
567 1350 5.577945 ACAAAAGAACATGCAAGAACACTTG 59.422 36.000 0.00 0.00 42.47 3.16
582 1366 1.338020 CACTTGTGCCCCTTGTTCTTC 59.662 52.381 0.00 0.00 0.00 2.87
583 1367 1.215423 ACTTGTGCCCCTTGTTCTTCT 59.785 47.619 0.00 0.00 0.00 2.85
584 1368 1.610522 CTTGTGCCCCTTGTTCTTCTG 59.389 52.381 0.00 0.00 0.00 3.02
585 1369 0.843309 TGTGCCCCTTGTTCTTCTGA 59.157 50.000 0.00 0.00 0.00 3.27
586 1370 1.239347 GTGCCCCTTGTTCTTCTGAC 58.761 55.000 0.00 0.00 0.00 3.51
587 1371 0.843309 TGCCCCTTGTTCTTCTGACA 59.157 50.000 0.00 0.00 0.00 3.58
588 1372 1.214175 TGCCCCTTGTTCTTCTGACAA 59.786 47.619 0.00 0.00 0.00 3.18
589 1373 2.306847 GCCCCTTGTTCTTCTGACAAA 58.693 47.619 0.00 0.00 0.00 2.83
590 1374 2.294512 GCCCCTTGTTCTTCTGACAAAG 59.705 50.000 0.00 0.00 0.00 2.77
591 1375 3.820557 CCCCTTGTTCTTCTGACAAAGA 58.179 45.455 0.00 0.00 33.50 2.52
592 1376 4.207165 CCCCTTGTTCTTCTGACAAAGAA 58.793 43.478 8.04 8.04 42.83 2.52
599 1383 5.833406 TTCTTCTGACAAAGAACATGCAA 57.167 34.783 0.00 0.00 40.09 4.08
600 1384 5.428496 TCTTCTGACAAAGAACATGCAAG 57.572 39.130 0.00 0.00 40.09 4.01
601 1385 5.125356 TCTTCTGACAAAGAACATGCAAGA 58.875 37.500 0.00 0.00 40.09 3.02
602 1386 5.589855 TCTTCTGACAAAGAACATGCAAGAA 59.410 36.000 0.00 0.00 40.09 2.52
603 1387 5.173774 TCTGACAAAGAACATGCAAGAAC 57.826 39.130 0.00 0.00 29.54 3.01
604 1388 4.639755 TCTGACAAAGAACATGCAAGAACA 59.360 37.500 0.00 0.00 29.54 3.18
605 1389 5.300034 TCTGACAAAGAACATGCAAGAACAT 59.700 36.000 0.00 0.00 29.54 2.71
606 1390 6.486320 TCTGACAAAGAACATGCAAGAACATA 59.514 34.615 0.00 0.00 29.54 2.29
607 1391 7.175467 TCTGACAAAGAACATGCAAGAACATAT 59.825 33.333 0.00 0.00 29.54 1.78
608 1392 7.660112 TGACAAAGAACATGCAAGAACATATT 58.340 30.769 0.00 0.00 0.00 1.28
609 1393 8.143193 TGACAAAGAACATGCAAGAACATATTT 58.857 29.630 0.00 0.00 0.00 1.40
610 1394 8.524870 ACAAAGAACATGCAAGAACATATTTC 57.475 30.769 0.00 0.00 0.00 2.17
611 1395 7.599998 ACAAAGAACATGCAAGAACATATTTCC 59.400 33.333 0.00 0.00 0.00 3.13
612 1396 6.839124 AGAACATGCAAGAACATATTTCCA 57.161 33.333 0.00 0.00 0.00 3.53
635 1419 6.694411 CCACTTGTTCTTCTGACAAAGAAATG 59.306 38.462 11.76 9.18 44.54 2.32
640 1424 6.489700 TGTTCTTCTGACAAAGAAATGGCATA 59.510 34.615 0.00 0.00 44.54 3.14
647 1431 4.751060 ACAAAGAAATGGCATATGCACTG 58.249 39.130 28.07 14.25 44.36 3.66
668 1453 1.609072 GCCCCTTGTTCTTCTGACAAC 59.391 52.381 0.00 0.00 0.00 3.32
669 1454 1.873591 CCCCTTGTTCTTCTGACAACG 59.126 52.381 0.00 0.00 0.00 4.10
713 1510 1.218196 TCCCCCTACCAGATCTGTCTC 59.782 57.143 21.11 0.00 30.42 3.36
720 1517 3.182887 ACCAGATCTGTCTCCTCAACT 57.817 47.619 21.11 0.00 30.42 3.16
741 1538 6.842437 ACTGATTCTAGAGCTGTGTTTCTA 57.158 37.500 0.00 0.00 0.00 2.10
742 1539 7.416964 ACTGATTCTAGAGCTGTGTTTCTAT 57.583 36.000 0.00 0.00 0.00 1.98
747 1546 9.766277 GATTCTAGAGCTGTGTTTCTATTTTTG 57.234 33.333 0.00 0.00 0.00 2.44
844 1765 2.594303 TGGTTTGCCGAGCACAGG 60.594 61.111 0.00 0.00 38.71 4.00
872 1793 4.460382 CCTATGAACCTTCTTGCATGTTGT 59.540 41.667 0.00 0.00 0.00 3.32
873 1794 4.942761 ATGAACCTTCTTGCATGTTGTT 57.057 36.364 0.00 2.39 0.00 2.83
874 1795 4.044336 TGAACCTTCTTGCATGTTGTTG 57.956 40.909 0.00 0.00 0.00 3.33
901 1822 2.942804 TGAACTGTTCCATCCAAAGCA 58.057 42.857 17.26 0.00 0.00 3.91
907 1828 4.202461 ACTGTTCCATCCAAAGCACTTCTA 60.202 41.667 0.00 0.00 0.00 2.10
963 1885 1.153208 CTGAGGCTGGGTCTGATGC 60.153 63.158 0.00 0.00 0.00 3.91
984 1907 9.322773 TGATGCTAGATAGATTCAGTTTTTCAG 57.677 33.333 0.00 0.00 0.00 3.02
988 1911 7.440856 GCTAGATAGATTCAGTTTTTCAGGGAG 59.559 40.741 0.00 0.00 0.00 4.30
999 1922 6.920210 CAGTTTTTCAGGGAGAAGTTTGATTC 59.080 38.462 0.00 0.00 37.57 2.52
1001 1924 6.639632 TTTTCAGGGAGAAGTTTGATTCAG 57.360 37.500 0.00 0.00 37.57 3.02
1002 1925 4.982241 TCAGGGAGAAGTTTGATTCAGT 57.018 40.909 0.00 0.00 0.00 3.41
1004 1927 5.694995 TCAGGGAGAAGTTTGATTCAGTTT 58.305 37.500 0.00 0.00 0.00 2.66
1005 1928 6.837312 TCAGGGAGAAGTTTGATTCAGTTTA 58.163 36.000 0.00 0.00 0.00 2.01
1006 1929 7.287061 TCAGGGAGAAGTTTGATTCAGTTTAA 58.713 34.615 0.00 0.00 0.00 1.52
1008 1931 8.239998 CAGGGAGAAGTTTGATTCAGTTTAATC 58.760 37.037 0.00 0.00 36.57 1.75
1032 2125 2.728383 CGTCGTCGTCGCAAAGGT 60.728 61.111 0.00 0.00 36.96 3.50
1033 2126 2.704193 CGTCGTCGTCGCAAAGGTC 61.704 63.158 0.00 0.00 36.96 3.85
1034 2127 1.659335 GTCGTCGTCGCAAAGGTCA 60.659 57.895 0.00 0.00 36.96 4.02
1035 2128 1.371267 TCGTCGTCGCAAAGGTCAG 60.371 57.895 0.00 0.00 36.96 3.51
1036 2129 1.371267 CGTCGTCGCAAAGGTCAGA 60.371 57.895 0.00 0.00 0.00 3.27
1037 2130 0.732880 CGTCGTCGCAAAGGTCAGAT 60.733 55.000 0.00 0.00 0.00 2.90
1038 2131 1.466866 CGTCGTCGCAAAGGTCAGATA 60.467 52.381 0.00 0.00 0.00 1.98
1039 2132 1.918609 GTCGTCGCAAAGGTCAGATAC 59.081 52.381 0.00 0.00 0.00 2.24
1070 2163 2.511600 GTGAAGGACATCGGCGGG 60.512 66.667 7.21 1.91 0.00 6.13
1281 2374 2.283173 TCACTCAGCTCGCCCAGA 60.283 61.111 0.00 0.00 0.00 3.86
1307 2400 2.355818 GGTAGGTCAATTGTCCCTGTCC 60.356 54.545 21.95 19.41 0.00 4.02
1312 2441 4.230502 AGGTCAATTGTCCCTGTCCATATT 59.769 41.667 16.80 0.00 0.00 1.28
1313 2442 4.580580 GGTCAATTGTCCCTGTCCATATTC 59.419 45.833 10.30 0.00 0.00 1.75
1314 2443 4.580580 GTCAATTGTCCCTGTCCATATTCC 59.419 45.833 5.13 0.00 0.00 3.01
1318 2447 2.777692 TGTCCCTGTCCATATTCCTTCC 59.222 50.000 0.00 0.00 0.00 3.46
1319 2448 3.049344 GTCCCTGTCCATATTCCTTCCT 58.951 50.000 0.00 0.00 0.00 3.36
1320 2449 3.071747 GTCCCTGTCCATATTCCTTCCTC 59.928 52.174 0.00 0.00 0.00 3.71
1321 2450 2.037772 CCCTGTCCATATTCCTTCCTCG 59.962 54.545 0.00 0.00 0.00 4.63
1322 2451 2.548920 CCTGTCCATATTCCTTCCTCGC 60.549 54.545 0.00 0.00 0.00 5.03
1326 2455 4.021104 TGTCCATATTCCTTCCTCGCATAG 60.021 45.833 0.00 0.00 0.00 2.23
1327 2456 4.220821 GTCCATATTCCTTCCTCGCATAGA 59.779 45.833 0.00 0.00 0.00 1.98
1328 2457 4.838423 TCCATATTCCTTCCTCGCATAGAA 59.162 41.667 0.00 0.00 0.00 2.10
1329 2458 5.306937 TCCATATTCCTTCCTCGCATAGAAA 59.693 40.000 0.00 0.00 0.00 2.52
1330 2459 5.641209 CCATATTCCTTCCTCGCATAGAAAG 59.359 44.000 0.00 0.00 0.00 2.62
1331 2460 6.459066 CATATTCCTTCCTCGCATAGAAAGA 58.541 40.000 0.00 0.00 0.00 2.52
1332 2461 4.392921 TTCCTTCCTCGCATAGAAAGAG 57.607 45.455 0.00 0.00 0.00 2.85
1335 2464 4.098654 TCCTTCCTCGCATAGAAAGAGAAG 59.901 45.833 0.00 0.00 34.13 2.85
1336 2465 4.098654 CCTTCCTCGCATAGAAAGAGAAGA 59.901 45.833 0.00 0.00 34.13 2.87
1337 2466 5.394663 CCTTCCTCGCATAGAAAGAGAAGAA 60.395 44.000 0.00 0.00 34.13 2.52
1338 2467 5.255710 TCCTCGCATAGAAAGAGAAGAAG 57.744 43.478 0.00 0.00 34.13 2.85
1339 2468 4.098654 TCCTCGCATAGAAAGAGAAGAAGG 59.901 45.833 0.00 0.00 34.13 3.46
1340 2469 4.142049 CCTCGCATAGAAAGAGAAGAAGGT 60.142 45.833 0.00 0.00 34.13 3.50
1341 2470 5.000012 TCGCATAGAAAGAGAAGAAGGTC 58.000 43.478 0.00 0.00 0.00 3.85
1342 2471 4.462834 TCGCATAGAAAGAGAAGAAGGTCA 59.537 41.667 0.00 0.00 0.00 4.02
1344 2473 5.062809 CGCATAGAAAGAGAAGAAGGTCAAC 59.937 44.000 0.00 0.00 0.00 3.18
1345 2474 5.934625 GCATAGAAAGAGAAGAAGGTCAACA 59.065 40.000 0.00 0.00 0.00 3.33
1346 2475 6.597280 GCATAGAAAGAGAAGAAGGTCAACAT 59.403 38.462 0.00 0.00 0.00 2.71
1347 2476 7.413877 GCATAGAAAGAGAAGAAGGTCAACATG 60.414 40.741 0.00 0.00 0.00 3.21
1348 2477 5.934781 AGAAAGAGAAGAAGGTCAACATGT 58.065 37.500 0.00 0.00 0.00 3.21
1349 2478 7.067496 AGAAAGAGAAGAAGGTCAACATGTA 57.933 36.000 0.00 0.00 0.00 2.29
1350 2479 7.684529 AGAAAGAGAAGAAGGTCAACATGTAT 58.315 34.615 0.00 0.00 0.00 2.29
1351 2480 7.605691 AGAAAGAGAAGAAGGTCAACATGTATG 59.394 37.037 0.00 0.00 0.00 2.39
1352 2481 6.365970 AGAGAAGAAGGTCAACATGTATGT 57.634 37.500 0.00 0.00 44.20 2.29
1353 2482 7.482169 AGAGAAGAAGGTCAACATGTATGTA 57.518 36.000 0.00 0.00 40.80 2.29
1357 2486 8.157476 AGAAGAAGGTCAACATGTATGTAAAGT 58.843 33.333 0.00 0.00 40.80 2.66
1684 2872 9.991906 CTAGATGCATCCATTTTTATCCATTTT 57.008 29.630 23.06 0.86 0.00 1.82
1705 2893 7.397892 TTTTTCTGACAAGTATTTCCACACA 57.602 32.000 0.00 0.00 0.00 3.72
2934 4497 1.075979 CATGTTCGTCGTCGCCATGA 61.076 55.000 20.69 0.00 42.67 3.07
3226 4808 2.108278 AAAAGACCACTACCGCCGCT 62.108 55.000 0.00 0.00 0.00 5.52
3356 4948 4.202233 GCTATGTAGGAAAGAGGGTACACC 60.202 50.000 0.00 0.00 40.67 4.16
3477 6234 7.731882 AGAACTAAAAACTGAAGCTAAGTCC 57.268 36.000 2.65 0.00 0.00 3.85
3479 6236 5.937111 ACTAAAAACTGAAGCTAAGTCCCA 58.063 37.500 2.65 0.00 0.00 4.37
3480 6237 6.362248 ACTAAAAACTGAAGCTAAGTCCCAA 58.638 36.000 2.65 0.00 0.00 4.12
3483 6240 6.731292 AAAACTGAAGCTAAGTCCCAAATT 57.269 33.333 2.65 0.00 0.00 1.82
3484 6241 6.731292 AAACTGAAGCTAAGTCCCAAATTT 57.269 33.333 2.65 0.00 0.00 1.82
3485 6242 5.966742 ACTGAAGCTAAGTCCCAAATTTC 57.033 39.130 0.00 0.00 0.00 2.17
3486 6243 4.767409 ACTGAAGCTAAGTCCCAAATTTCC 59.233 41.667 0.00 0.00 0.00 3.13
3487 6244 4.735369 TGAAGCTAAGTCCCAAATTTCCA 58.265 39.130 0.00 0.00 0.00 3.53
3488 6245 4.766891 TGAAGCTAAGTCCCAAATTTCCAG 59.233 41.667 0.00 0.00 0.00 3.86
3489 6246 4.388577 AGCTAAGTCCCAAATTTCCAGT 57.611 40.909 0.00 0.00 0.00 4.00
3491 6248 5.501156 AGCTAAGTCCCAAATTTCCAGTAG 58.499 41.667 0.00 0.00 0.00 2.57
3494 6251 6.094186 GCTAAGTCCCAAATTTCCAGTAGAAG 59.906 42.308 0.00 0.00 35.40 2.85
3495 6252 5.843019 AGTCCCAAATTTCCAGTAGAAGA 57.157 39.130 0.00 0.00 35.40 2.87
3496 6253 5.810095 AGTCCCAAATTTCCAGTAGAAGAG 58.190 41.667 0.00 0.00 35.40 2.85
3497 6254 4.944317 GTCCCAAATTTCCAGTAGAAGAGG 59.056 45.833 0.00 0.00 35.40 3.69
3498 6255 4.849810 TCCCAAATTTCCAGTAGAAGAGGA 59.150 41.667 0.00 0.00 35.40 3.71
3499 6256 5.045578 TCCCAAATTTCCAGTAGAAGAGGAG 60.046 44.000 0.00 0.00 35.40 3.69
3500 6257 4.637977 CCAAATTTCCAGTAGAAGAGGAGC 59.362 45.833 0.00 0.00 35.40 4.70
3501 6258 4.495690 AATTTCCAGTAGAAGAGGAGCC 57.504 45.455 0.00 0.00 35.40 4.70
3503 6260 1.853963 TCCAGTAGAAGAGGAGCCAC 58.146 55.000 0.00 0.00 0.00 5.01
3506 6263 2.354203 CCAGTAGAAGAGGAGCCACAAC 60.354 54.545 0.00 0.00 0.00 3.32
3509 6266 1.722034 AGAAGAGGAGCCACAACAGA 58.278 50.000 0.00 0.00 0.00 3.41
3510 6267 2.050144 AGAAGAGGAGCCACAACAGAA 58.950 47.619 0.00 0.00 0.00 3.02
3511 6268 2.641815 AGAAGAGGAGCCACAACAGAAT 59.358 45.455 0.00 0.00 0.00 2.40
3512 6269 2.486472 AGAGGAGCCACAACAGAATG 57.514 50.000 0.00 0.00 46.00 2.67
3527 6284 3.525537 CAGAATGTGAGTTATGGCGAGT 58.474 45.455 0.00 0.00 0.00 4.18
3528 6285 4.682787 CAGAATGTGAGTTATGGCGAGTA 58.317 43.478 0.00 0.00 0.00 2.59
3529 6286 5.292765 CAGAATGTGAGTTATGGCGAGTAT 58.707 41.667 0.00 0.00 0.00 2.12
3530 6287 5.755375 CAGAATGTGAGTTATGGCGAGTATT 59.245 40.000 0.00 0.00 0.00 1.89
3531 6288 5.986135 AGAATGTGAGTTATGGCGAGTATTC 59.014 40.000 0.00 0.00 0.00 1.75
3532 6289 4.054780 TGTGAGTTATGGCGAGTATTCC 57.945 45.455 0.00 0.00 0.00 3.01
3533 6290 3.449377 TGTGAGTTATGGCGAGTATTCCA 59.551 43.478 0.00 0.00 36.70 3.53
3534 6291 4.100963 TGTGAGTTATGGCGAGTATTCCAT 59.899 41.667 0.00 0.00 44.62 3.41
3535 6292 5.303333 TGTGAGTTATGGCGAGTATTCCATA 59.697 40.000 0.00 0.00 42.62 2.74
3536 6293 6.014584 TGTGAGTTATGGCGAGTATTCCATAT 60.015 38.462 2.26 0.00 42.85 1.78
3537 6294 6.311445 GTGAGTTATGGCGAGTATTCCATATG 59.689 42.308 0.00 0.00 42.85 1.78
3538 6295 6.014584 TGAGTTATGGCGAGTATTCCATATGT 60.015 38.462 1.24 0.00 42.85 2.29
3539 6296 6.769512 AGTTATGGCGAGTATTCCATATGTT 58.230 36.000 1.24 0.00 42.85 2.71
3540 6297 7.224297 AGTTATGGCGAGTATTCCATATGTTT 58.776 34.615 1.24 0.00 42.85 2.83
3541 6298 8.372459 AGTTATGGCGAGTATTCCATATGTTTA 58.628 33.333 1.24 0.00 42.85 2.01
3542 6299 9.162764 GTTATGGCGAGTATTCCATATGTTTAT 57.837 33.333 1.24 0.00 42.85 1.40
3543 6300 7.849804 ATGGCGAGTATTCCATATGTTTATC 57.150 36.000 1.24 0.00 41.03 1.75
3544 6301 6.764379 TGGCGAGTATTCCATATGTTTATCA 58.236 36.000 1.24 0.00 0.00 2.15
3545 6302 6.873605 TGGCGAGTATTCCATATGTTTATCAG 59.126 38.462 1.24 0.00 0.00 2.90
3546 6303 6.183360 GGCGAGTATTCCATATGTTTATCAGC 60.183 42.308 1.24 0.00 0.00 4.26
3547 6304 6.368791 GCGAGTATTCCATATGTTTATCAGCA 59.631 38.462 1.24 0.00 0.00 4.41
3548 6305 7.095229 GCGAGTATTCCATATGTTTATCAGCAA 60.095 37.037 1.24 0.00 0.00 3.91
3549 6306 8.773645 CGAGTATTCCATATGTTTATCAGCAAA 58.226 33.333 1.24 0.00 0.00 3.68
3556 6313 9.365906 TCCATATGTTTATCAGCAAAATATGGT 57.634 29.630 16.77 0.00 38.39 3.55
3567 6324 6.455360 AGCAAAATATGGTGAGTTATGGTG 57.545 37.500 0.00 0.00 38.62 4.17
3568 6325 6.186957 AGCAAAATATGGTGAGTTATGGTGA 58.813 36.000 0.00 0.00 38.62 4.02
3569 6326 6.319658 AGCAAAATATGGTGAGTTATGGTGAG 59.680 38.462 0.00 0.00 38.62 3.51
3570 6327 6.095440 GCAAAATATGGTGAGTTATGGTGAGT 59.905 38.462 0.00 0.00 0.00 3.41
3571 6328 7.679638 GCAAAATATGGTGAGTTATGGTGAGTC 60.680 40.741 0.00 0.00 0.00 3.36
3572 6329 3.914426 ATGGTGAGTTATGGTGAGTCC 57.086 47.619 0.00 0.00 0.00 3.85
3573 6330 1.906574 TGGTGAGTTATGGTGAGTCCC 59.093 52.381 0.00 0.00 34.77 4.46
3574 6331 1.209747 GGTGAGTTATGGTGAGTCCCC 59.790 57.143 0.00 0.00 34.77 4.81
3575 6332 1.906574 GTGAGTTATGGTGAGTCCCCA 59.093 52.381 0.00 0.00 36.16 4.96
3576 6333 2.304761 GTGAGTTATGGTGAGTCCCCAA 59.695 50.000 0.00 0.00 35.14 4.12
3577 6334 3.054361 GTGAGTTATGGTGAGTCCCCAAT 60.054 47.826 0.00 0.00 35.14 3.16
3578 6335 3.591527 TGAGTTATGGTGAGTCCCCAATT 59.408 43.478 0.00 0.00 35.14 2.32
3579 6336 4.044065 TGAGTTATGGTGAGTCCCCAATTT 59.956 41.667 0.00 0.00 35.14 1.82
3580 6337 5.010708 AGTTATGGTGAGTCCCCAATTTT 57.989 39.130 0.00 0.00 35.14 1.82
3581 6338 5.016831 AGTTATGGTGAGTCCCCAATTTTC 58.983 41.667 0.00 0.00 35.14 2.29
3582 6339 3.541242 ATGGTGAGTCCCCAATTTTCA 57.459 42.857 0.00 0.00 35.14 2.69
3583 6340 2.875296 TGGTGAGTCCCCAATTTTCAG 58.125 47.619 0.00 0.00 34.77 3.02
3584 6341 2.176798 TGGTGAGTCCCCAATTTTCAGT 59.823 45.455 0.00 0.00 34.77 3.41
3585 6342 3.396276 TGGTGAGTCCCCAATTTTCAGTA 59.604 43.478 0.00 0.00 34.77 2.74
3586 6343 4.010349 GGTGAGTCCCCAATTTTCAGTAG 58.990 47.826 0.00 0.00 0.00 2.57
3587 6344 4.263331 GGTGAGTCCCCAATTTTCAGTAGA 60.263 45.833 0.00 0.00 0.00 2.59
3588 6345 5.313712 GTGAGTCCCCAATTTTCAGTAGAA 58.686 41.667 0.00 0.00 0.00 2.10
3589 6346 5.412904 GTGAGTCCCCAATTTTCAGTAGAAG 59.587 44.000 0.00 0.00 34.71 2.85
3590 6347 5.309543 TGAGTCCCCAATTTTCAGTAGAAGA 59.690 40.000 0.00 0.00 34.71 2.87
3591 6348 5.810095 AGTCCCCAATTTTCAGTAGAAGAG 58.190 41.667 0.00 0.00 34.71 2.85
3592 6349 4.944317 GTCCCCAATTTTCAGTAGAAGAGG 59.056 45.833 0.00 0.00 34.71 3.69
3593 6350 4.849810 TCCCCAATTTTCAGTAGAAGAGGA 59.150 41.667 0.00 0.00 34.71 3.71
3594 6351 5.312178 TCCCCAATTTTCAGTAGAAGAGGAA 59.688 40.000 0.00 0.00 34.71 3.36
3595 6352 5.416013 CCCCAATTTTCAGTAGAAGAGGAAC 59.584 44.000 0.00 0.00 34.71 3.62
3609 6366 7.765695 AGAAGAGGAACAAAAATGCTTATCA 57.234 32.000 0.00 0.00 0.00 2.15
3642 6399 3.812167 GCAAAGAAGTCAAGATCACCCCT 60.812 47.826 0.00 0.00 0.00 4.79
3662 6419 3.882888 CCTTAGGCACAAGTTTGAAGACA 59.117 43.478 0.00 0.00 0.00 3.41
3746 6503 9.003658 CAATGTCTACCTCCATATGGTAATTTC 57.996 37.037 21.28 8.61 39.29 2.17
3755 6512 9.230477 CCTCCATATGGTAATTTCCTATATCCT 57.770 37.037 21.28 0.00 36.34 3.24
3776 6533 8.930287 ATCCTTATTCATCTTCATATCCTCCT 57.070 34.615 0.00 0.00 0.00 3.69
3777 6534 8.748179 TCCTTATTCATCTTCATATCCTCCTT 57.252 34.615 0.00 0.00 0.00 3.36
3778 6535 9.175577 TCCTTATTCATCTTCATATCCTCCTTT 57.824 33.333 0.00 0.00 0.00 3.11
3779 6536 9.804977 CCTTATTCATCTTCATATCCTCCTTTT 57.195 33.333 0.00 0.00 0.00 2.27
3781 6538 9.578576 TTATTCATCTTCATATCCTCCTTTTGG 57.421 33.333 0.00 0.00 42.21 3.28
3782 6539 5.945310 TCATCTTCATATCCTCCTTTTGGG 58.055 41.667 0.00 0.00 40.87 4.12
3783 6540 4.170468 TCTTCATATCCTCCTTTTGGGC 57.830 45.455 0.00 0.00 40.87 5.36
3784 6541 3.117512 TCTTCATATCCTCCTTTTGGGCC 60.118 47.826 0.00 0.00 40.87 5.80
3785 6542 2.213310 TCATATCCTCCTTTTGGGCCA 58.787 47.619 0.00 0.00 40.87 5.36
3786 6543 2.791179 TCATATCCTCCTTTTGGGCCAT 59.209 45.455 7.26 0.00 40.87 4.40
3787 6544 3.160269 CATATCCTCCTTTTGGGCCATC 58.840 50.000 7.26 0.00 40.87 3.51
3788 6545 1.009997 ATCCTCCTTTTGGGCCATCA 58.990 50.000 7.26 0.00 40.87 3.07
3789 6546 0.783206 TCCTCCTTTTGGGCCATCAA 59.217 50.000 7.26 2.30 40.87 2.57
3790 6547 1.362237 TCCTCCTTTTGGGCCATCAAT 59.638 47.619 7.26 0.00 40.87 2.57
3791 6548 1.483415 CCTCCTTTTGGGCCATCAATG 59.517 52.381 7.26 1.63 40.87 2.82
3792 6549 0.903942 TCCTTTTGGGCCATCAATGC 59.096 50.000 7.26 0.00 40.87 3.56
3802 6559 3.360249 GCCATCAATGCCAATGTCTAC 57.640 47.619 0.00 0.00 0.00 2.59
3803 6560 2.035066 GCCATCAATGCCAATGTCTACC 59.965 50.000 0.00 0.00 0.00 3.18
3804 6561 3.559069 CCATCAATGCCAATGTCTACCT 58.441 45.455 0.00 0.00 0.00 3.08
3805 6562 3.567164 CCATCAATGCCAATGTCTACCTC 59.433 47.826 0.00 0.00 0.00 3.85
3806 6563 3.281727 TCAATGCCAATGTCTACCTCC 57.718 47.619 0.00 0.00 0.00 4.30
3807 6564 2.575735 TCAATGCCAATGTCTACCTCCA 59.424 45.455 0.00 0.00 0.00 3.86
3808 6565 3.202818 TCAATGCCAATGTCTACCTCCAT 59.797 43.478 0.00 0.00 0.00 3.41
3809 6566 4.411869 TCAATGCCAATGTCTACCTCCATA 59.588 41.667 0.00 0.00 0.00 2.74
3810 6567 5.073554 TCAATGCCAATGTCTACCTCCATAT 59.926 40.000 0.00 0.00 0.00 1.78
3811 6568 6.272090 TCAATGCCAATGTCTACCTCCATATA 59.728 38.462 0.00 0.00 0.00 0.86
3812 6569 6.898171 ATGCCAATGTCTACCTCCATATAT 57.102 37.500 0.00 0.00 0.00 0.86
3813 6570 6.053632 TGCCAATGTCTACCTCCATATATG 57.946 41.667 5.68 5.68 0.00 1.78
3814 6571 5.784906 TGCCAATGTCTACCTCCATATATGA 59.215 40.000 14.54 0.00 0.00 2.15
3815 6572 6.444816 TGCCAATGTCTACCTCCATATATGAT 59.555 38.462 14.54 0.00 0.00 2.45
3816 6573 7.623278 TGCCAATGTCTACCTCCATATATGATA 59.377 37.037 14.54 1.25 0.00 2.15
3817 6574 8.486210 GCCAATGTCTACCTCCATATATGATAA 58.514 37.037 14.54 0.00 0.00 1.75
3851 6608 2.621338 TCACGAGACAGGCATGAATTC 58.379 47.619 4.84 0.00 0.00 2.17
3854 6611 3.189080 CACGAGACAGGCATGAATTCAAA 59.811 43.478 13.09 0.00 0.00 2.69
3914 6672 6.753913 AATTATACAGCTCCAAGAGGATCA 57.246 37.500 0.00 0.00 44.70 2.92
3943 6701 8.984891 ATTTGATGAAAAATCATACGCTTCAA 57.015 26.923 0.00 0.00 30.37 2.69
3944 6702 8.984891 TTTGATGAAAAATCATACGCTTCAAT 57.015 26.923 0.00 0.00 30.37 2.57
3946 6704 7.760437 TGATGAAAAATCATACGCTTCAATCA 58.240 30.769 0.00 0.00 30.37 2.57
3947 6705 8.407832 TGATGAAAAATCATACGCTTCAATCAT 58.592 29.630 0.00 0.00 30.37 2.45
3948 6706 9.882996 GATGAAAAATCATACGCTTCAATCATA 57.117 29.630 0.00 0.00 30.37 2.15
3978 6742 1.748493 ACGATCTGGAGCTCAAGAGAC 59.252 52.381 24.82 19.01 0.00 3.36
4013 6777 4.799419 TCAAGCAAGTTTACCGTGTTAC 57.201 40.909 0.00 0.00 0.00 2.50
4025 6789 4.921470 ACCGTGTTACAAAAGATGATCG 57.079 40.909 0.00 0.00 0.00 3.69
4053 6817 8.879342 AATGTGCTACTTCAGATCTAATGTAC 57.121 34.615 0.00 0.00 0.00 2.90
4054 6818 7.646548 TGTGCTACTTCAGATCTAATGTACT 57.353 36.000 0.00 0.00 0.00 2.73
4055 6819 7.708051 TGTGCTACTTCAGATCTAATGTACTC 58.292 38.462 0.00 0.00 0.00 2.59
4056 6820 7.142680 GTGCTACTTCAGATCTAATGTACTCC 58.857 42.308 0.00 0.00 0.00 3.85
4057 6821 7.013846 GTGCTACTTCAGATCTAATGTACTCCT 59.986 40.741 0.00 0.00 0.00 3.69
4058 6822 7.561722 TGCTACTTCAGATCTAATGTACTCCTT 59.438 37.037 0.00 0.00 0.00 3.36
4059 6823 8.079809 GCTACTTCAGATCTAATGTACTCCTTC 58.920 40.741 0.00 0.00 0.00 3.46
4060 6824 7.354751 ACTTCAGATCTAATGTACTCCTTCC 57.645 40.000 0.00 0.00 0.00 3.46
4061 6825 7.129425 ACTTCAGATCTAATGTACTCCTTCCT 58.871 38.462 0.00 0.00 0.00 3.36
4062 6826 7.621683 ACTTCAGATCTAATGTACTCCTTCCTT 59.378 37.037 0.00 0.00 0.00 3.36
4063 6827 7.979786 TCAGATCTAATGTACTCCTTCCTTT 57.020 36.000 0.00 0.00 0.00 3.11
4064 6828 8.012957 TCAGATCTAATGTACTCCTTCCTTTC 57.987 38.462 0.00 0.00 0.00 2.62
4065 6829 7.070074 TCAGATCTAATGTACTCCTTCCTTTCC 59.930 40.741 0.00 0.00 0.00 3.13
4066 6830 7.070571 CAGATCTAATGTACTCCTTCCTTTCCT 59.929 40.741 0.00 0.00 0.00 3.36
4067 6831 8.290277 AGATCTAATGTACTCCTTCCTTTCCTA 58.710 37.037 0.00 0.00 0.00 2.94
4068 6832 8.855804 ATCTAATGTACTCCTTCCTTTCCTAA 57.144 34.615 0.00 0.00 0.00 2.69
4069 6833 8.674925 TCTAATGTACTCCTTCCTTTCCTAAA 57.325 34.615 0.00 0.00 0.00 1.85
4070 6834 9.280456 TCTAATGTACTCCTTCCTTTCCTAAAT 57.720 33.333 0.00 0.00 0.00 1.40
4078 6842 9.508721 ACTCCTTCCTTTCCTAAATATAAGTCT 57.491 33.333 0.00 0.00 0.00 3.24
4124 6888 9.511272 ACTACAATATACGGATGTATGTAGACA 57.489 33.333 24.44 0.00 40.69 3.41
4130 6894 7.997773 ATACGGATGTATGTAGACATAGTGT 57.002 36.000 2.56 1.48 40.18 3.55
4132 6896 7.436430 ACGGATGTATGTAGACATAGTGTAG 57.564 40.000 2.56 0.00 40.18 2.74
4133 6897 7.222161 ACGGATGTATGTAGACATAGTGTAGA 58.778 38.462 2.56 0.00 40.18 2.59
4134 6898 7.883833 ACGGATGTATGTAGACATAGTGTAGAT 59.116 37.037 2.56 0.00 40.18 1.98
4135 6899 8.731605 CGGATGTATGTAGACATAGTGTAGATT 58.268 37.037 2.56 0.00 40.18 2.40
4141 6905 8.753497 ATGTAGACATAGTGTAGATTCACTCA 57.247 34.615 2.59 0.00 45.79 3.41
4142 6906 8.753497 TGTAGACATAGTGTAGATTCACTCAT 57.247 34.615 2.59 0.00 45.79 2.90
4143 6907 9.190317 TGTAGACATAGTGTAGATTCACTCATT 57.810 33.333 2.59 0.00 45.79 2.57
4146 6910 9.376075 AGACATAGTGTAGATTCACTCATTTTG 57.624 33.333 2.59 0.00 45.79 2.44
4147 6911 7.978982 ACATAGTGTAGATTCACTCATTTTGC 58.021 34.615 2.59 0.00 45.79 3.68
4148 6912 7.826252 ACATAGTGTAGATTCACTCATTTTGCT 59.174 33.333 2.59 0.00 45.79 3.91
4149 6913 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4150 6914 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4151 6915 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4152 6916 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4153 6917 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4154 6918 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4155 6919 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4156 6920 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4157 6921 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4158 6922 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4159 6923 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4160 6924 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4161 6925 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
4162 6926 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
4163 6927 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
4164 6928 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
4165 6929 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
4166 6930 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
4167 6931 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
4168 6932 4.460034 TGCTCCGTATGTAGTCACTTGTTA 59.540 41.667 0.00 0.00 0.00 2.41
4169 6933 5.035443 GCTCCGTATGTAGTCACTTGTTAG 58.965 45.833 0.00 0.00 0.00 2.34
4170 6934 5.163683 GCTCCGTATGTAGTCACTTGTTAGA 60.164 44.000 0.00 0.00 0.00 2.10
4171 6935 6.624423 GCTCCGTATGTAGTCACTTGTTAGAA 60.624 42.308 0.00 0.00 0.00 2.10
4172 6936 7.400599 TCCGTATGTAGTCACTTGTTAGAAT 57.599 36.000 0.00 0.00 0.00 2.40
4173 6937 7.478322 TCCGTATGTAGTCACTTGTTAGAATC 58.522 38.462 0.00 0.00 0.00 2.52
4174 6938 7.338703 TCCGTATGTAGTCACTTGTTAGAATCT 59.661 37.037 0.00 0.00 0.00 2.40
4175 6939 7.644551 CCGTATGTAGTCACTTGTTAGAATCTC 59.355 40.741 0.00 0.00 0.00 2.75
4176 6940 8.399425 CGTATGTAGTCACTTGTTAGAATCTCT 58.601 37.037 0.00 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.864343 CGATCAGTTTAAGTAAGGGCCG 59.136 50.000 0.00 0.00 0.00 6.13
1 2 2.612672 GCGATCAGTTTAAGTAAGGGCC 59.387 50.000 0.00 0.00 0.00 5.80
2 3 2.612672 GGCGATCAGTTTAAGTAAGGGC 59.387 50.000 0.00 0.00 0.00 5.19
3 4 2.864343 CGGCGATCAGTTTAAGTAAGGG 59.136 50.000 0.00 0.00 0.00 3.95
4 5 2.864343 CCGGCGATCAGTTTAAGTAAGG 59.136 50.000 9.30 0.00 0.00 2.69
5 6 2.284417 GCCGGCGATCAGTTTAAGTAAG 59.716 50.000 12.58 0.00 0.00 2.34
6 7 2.273557 GCCGGCGATCAGTTTAAGTAA 58.726 47.619 12.58 0.00 0.00 2.24
7 8 1.205179 TGCCGGCGATCAGTTTAAGTA 59.795 47.619 23.90 0.00 0.00 2.24
8 9 0.036765 TGCCGGCGATCAGTTTAAGT 60.037 50.000 23.90 0.00 0.00 2.24
9 10 1.299541 ATGCCGGCGATCAGTTTAAG 58.700 50.000 23.90 0.00 0.00 1.85
10 11 2.605837 TATGCCGGCGATCAGTTTAA 57.394 45.000 23.90 0.00 0.00 1.52
11 12 2.412870 CATATGCCGGCGATCAGTTTA 58.587 47.619 23.90 0.00 0.00 2.01
12 13 1.229428 CATATGCCGGCGATCAGTTT 58.771 50.000 23.90 1.09 0.00 2.66
13 14 1.230635 GCATATGCCGGCGATCAGTT 61.231 55.000 23.90 2.59 34.31 3.16
14 15 1.669115 GCATATGCCGGCGATCAGT 60.669 57.895 23.90 5.73 34.31 3.41
15 16 3.171987 GCATATGCCGGCGATCAG 58.828 61.111 23.90 11.64 34.31 2.90
21 22 0.673644 ACCTAATCGCATATGCCGGC 60.674 55.000 22.73 22.73 37.91 6.13
22 23 2.268298 GTACCTAATCGCATATGCCGG 58.732 52.381 21.77 15.43 37.91 6.13
23 24 1.917955 CGTACCTAATCGCATATGCCG 59.082 52.381 21.77 16.14 37.91 5.69
24 25 2.955614 ACGTACCTAATCGCATATGCC 58.044 47.619 21.77 4.68 37.91 4.40
25 26 3.546670 GCTACGTACCTAATCGCATATGC 59.453 47.826 18.08 18.08 37.78 3.14
26 27 4.793731 CAGCTACGTACCTAATCGCATATG 59.206 45.833 0.00 0.00 0.00 1.78
27 28 4.458295 ACAGCTACGTACCTAATCGCATAT 59.542 41.667 0.00 0.00 0.00 1.78
28 29 3.817084 ACAGCTACGTACCTAATCGCATA 59.183 43.478 0.00 0.00 0.00 3.14
29 30 2.621998 ACAGCTACGTACCTAATCGCAT 59.378 45.455 0.00 0.00 0.00 4.73
30 31 2.019249 ACAGCTACGTACCTAATCGCA 58.981 47.619 0.00 0.00 0.00 5.10
31 32 2.382519 CACAGCTACGTACCTAATCGC 58.617 52.381 0.00 0.00 0.00 4.58
32 33 2.857489 GCCACAGCTACGTACCTAATCG 60.857 54.545 0.00 0.00 35.50 3.34
33 34 2.740452 GCCACAGCTACGTACCTAATC 58.260 52.381 0.00 0.00 35.50 1.75
34 35 2.884894 GCCACAGCTACGTACCTAAT 57.115 50.000 0.00 0.00 35.50 1.73
51 52 4.537433 AAGAGATGCCGCCGAGCC 62.537 66.667 0.00 0.00 0.00 4.70
52 53 2.964389 GAAGAGATGCCGCCGAGC 60.964 66.667 0.00 0.00 0.00 5.03
53 54 1.299773 GAGAAGAGATGCCGCCGAG 60.300 63.158 0.00 0.00 0.00 4.63
54 55 1.729470 GAGAGAAGAGATGCCGCCGA 61.729 60.000 0.00 0.00 0.00 5.54
55 56 1.299773 GAGAGAAGAGATGCCGCCG 60.300 63.158 0.00 0.00 0.00 6.46
56 57 1.068921 GGAGAGAAGAGATGCCGCC 59.931 63.158 0.00 0.00 0.00 6.13
57 58 1.323412 TAGGAGAGAAGAGATGCCGC 58.677 55.000 0.00 0.00 0.00 6.53
58 59 2.161410 CGATAGGAGAGAAGAGATGCCG 59.839 54.545 0.00 0.00 0.00 5.69
59 60 3.057596 CACGATAGGAGAGAAGAGATGCC 60.058 52.174 0.00 0.00 43.77 4.40
60 61 3.568007 ACACGATAGGAGAGAAGAGATGC 59.432 47.826 0.00 0.00 43.77 3.91
61 62 4.215399 GGACACGATAGGAGAGAAGAGATG 59.785 50.000 0.00 0.00 43.77 2.90
62 63 4.104102 AGGACACGATAGGAGAGAAGAGAT 59.896 45.833 0.00 0.00 43.77 2.75
63 64 3.456644 AGGACACGATAGGAGAGAAGAGA 59.543 47.826 0.00 0.00 43.77 3.10
64 65 3.815809 AGGACACGATAGGAGAGAAGAG 58.184 50.000 0.00 0.00 43.77 2.85
65 66 3.935818 AGGACACGATAGGAGAGAAGA 57.064 47.619 0.00 0.00 43.77 2.87
66 67 3.500680 GCTAGGACACGATAGGAGAGAAG 59.499 52.174 0.00 0.00 43.77 2.85
67 68 3.136809 AGCTAGGACACGATAGGAGAGAA 59.863 47.826 0.00 0.00 43.77 2.87
68 69 2.706723 AGCTAGGACACGATAGGAGAGA 59.293 50.000 0.00 0.00 43.77 3.10
69 70 2.811431 CAGCTAGGACACGATAGGAGAG 59.189 54.545 0.00 0.00 43.77 3.20
70 71 2.172930 ACAGCTAGGACACGATAGGAGA 59.827 50.000 0.00 0.00 43.77 3.71
71 72 2.292016 CACAGCTAGGACACGATAGGAG 59.708 54.545 0.00 0.00 43.77 3.69
72 73 2.092592 TCACAGCTAGGACACGATAGGA 60.093 50.000 0.00 0.00 43.77 2.94
73 74 2.298610 TCACAGCTAGGACACGATAGG 58.701 52.381 0.00 0.00 43.77 2.57
74 75 3.364465 CGATCACAGCTAGGACACGATAG 60.364 52.174 0.00 0.00 46.19 2.08
75 76 2.548480 CGATCACAGCTAGGACACGATA 59.452 50.000 0.00 0.00 0.00 2.92
76 77 1.335182 CGATCACAGCTAGGACACGAT 59.665 52.381 0.00 0.00 0.00 3.73
79 80 1.746220 ACTCGATCACAGCTAGGACAC 59.254 52.381 0.00 0.00 0.00 3.67
88 89 6.834959 AATAATACTGCAACTCGATCACAG 57.165 37.500 0.00 0.00 0.00 3.66
129 134 8.910351 ACCCTACTCAATTATTGCTTATCTTC 57.090 34.615 0.00 0.00 0.00 2.87
151 159 3.447229 CCATCCAAACAATACAAGGACCC 59.553 47.826 0.00 0.00 0.00 4.46
179 187 2.668212 GCGTGTTGGCTGGTAGCA 60.668 61.111 2.99 0.00 44.75 3.49
327 355 1.742831 GTGTGTGTGTGTGGAATGTGT 59.257 47.619 0.00 0.00 0.00 3.72
328 356 1.742268 TGTGTGTGTGTGTGGAATGTG 59.258 47.619 0.00 0.00 0.00 3.21
330 358 1.742268 TGTGTGTGTGTGTGTGGAATG 59.258 47.619 0.00 0.00 0.00 2.67
333 361 0.323302 AGTGTGTGTGTGTGTGTGGA 59.677 50.000 0.00 0.00 0.00 4.02
335 363 1.394572 CAGAGTGTGTGTGTGTGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
364 1138 3.909776 TGAAGCTGTTCTTGCTGATTG 57.090 42.857 0.00 0.00 41.03 2.67
388 1162 0.456221 AGTTAGGCAGTCACCGATCG 59.544 55.000 8.51 8.51 33.69 3.69
389 1163 1.471676 CCAGTTAGGCAGTCACCGATC 60.472 57.143 0.00 0.00 33.69 3.69
390 1164 0.537188 CCAGTTAGGCAGTCACCGAT 59.463 55.000 0.00 0.00 33.69 4.18
391 1165 0.830444 ACCAGTTAGGCAGTCACCGA 60.830 55.000 0.00 0.00 43.14 4.69
392 1166 0.892755 TACCAGTTAGGCAGTCACCG 59.107 55.000 0.00 0.00 43.14 4.94
393 1167 2.906354 CATACCAGTTAGGCAGTCACC 58.094 52.381 0.00 0.00 43.14 4.02
395 1169 1.905894 TGCATACCAGTTAGGCAGTCA 59.094 47.619 0.00 0.00 42.50 3.41
396 1170 2.691409 TGCATACCAGTTAGGCAGTC 57.309 50.000 0.00 0.00 42.50 3.51
401 1175 4.960938 TGCTAAGATGCATACCAGTTAGG 58.039 43.478 0.00 0.00 39.91 2.69
402 1176 5.049818 GCTTGCTAAGATGCATACCAGTTAG 60.050 44.000 0.00 3.81 42.96 2.34
414 1188 4.599047 GCTTTCAGATGCTTGCTAAGATG 58.401 43.478 0.00 0.00 0.00 2.90
415 1189 3.311871 CGCTTTCAGATGCTTGCTAAGAT 59.688 43.478 0.00 0.00 0.00 2.40
416 1190 2.674852 CGCTTTCAGATGCTTGCTAAGA 59.325 45.455 0.00 0.00 0.00 2.10
417 1191 2.417933 ACGCTTTCAGATGCTTGCTAAG 59.582 45.455 0.00 0.00 0.00 2.18
418 1192 2.160219 CACGCTTTCAGATGCTTGCTAA 59.840 45.455 0.00 0.00 0.00 3.09
419 1193 1.733912 CACGCTTTCAGATGCTTGCTA 59.266 47.619 0.00 0.00 0.00 3.49
420 1194 0.520404 CACGCTTTCAGATGCTTGCT 59.480 50.000 0.00 0.00 0.00 3.91
421 1195 0.518636 TCACGCTTTCAGATGCTTGC 59.481 50.000 0.00 0.00 0.00 4.01
422 1196 2.225019 AGTTCACGCTTTCAGATGCTTG 59.775 45.455 0.00 0.00 0.00 4.01
423 1197 2.481952 GAGTTCACGCTTTCAGATGCTT 59.518 45.455 0.00 0.00 0.00 3.91
437 1211 0.454600 TGGCGGTAGATCGAGTTCAC 59.545 55.000 0.00 0.00 0.00 3.18
445 1219 0.461961 AGCAGAAGTGGCGGTAGATC 59.538 55.000 0.00 0.00 36.08 2.75
449 1223 0.685097 AAAGAGCAGAAGTGGCGGTA 59.315 50.000 0.00 0.00 36.08 4.02
456 1230 3.482156 TGCTTGAGAAAGAGCAGAAGT 57.518 42.857 0.00 0.00 43.46 3.01
485 1259 3.561725 ACTGTGCTAGTGTTGAAAAGAGC 59.438 43.478 0.00 0.00 38.49 4.09
497 1271 2.154462 GCAAATCACCACTGTGCTAGT 58.846 47.619 1.29 0.00 42.46 2.57
498 1272 2.430465 AGCAAATCACCACTGTGCTAG 58.570 47.619 1.29 0.00 43.51 3.42
499 1273 2.553602 CAAGCAAATCACCACTGTGCTA 59.446 45.455 1.29 0.00 44.52 3.49
500 1274 3.426903 AGCAAATCACCACTGTGCT 57.573 47.368 1.29 0.00 42.46 4.40
501 1275 1.603678 CCAAGCAAATCACCACTGTGC 60.604 52.381 1.29 0.00 42.46 4.57
502 1276 1.603678 GCCAAGCAAATCACCACTGTG 60.604 52.381 0.00 0.00 44.18 3.66
503 1277 0.675633 GCCAAGCAAATCACCACTGT 59.324 50.000 0.00 0.00 0.00 3.55
504 1278 0.963962 AGCCAAGCAAATCACCACTG 59.036 50.000 0.00 0.00 0.00 3.66
505 1279 0.963962 CAGCCAAGCAAATCACCACT 59.036 50.000 0.00 0.00 0.00 4.00
506 1280 0.675633 ACAGCCAAGCAAATCACCAC 59.324 50.000 0.00 0.00 0.00 4.16
564 1347 1.610522 CAGAAGAACAAGGGGCACAAG 59.389 52.381 0.00 0.00 0.00 3.16
565 1348 1.214175 TCAGAAGAACAAGGGGCACAA 59.786 47.619 0.00 0.00 0.00 3.33
567 1350 1.239347 GTCAGAAGAACAAGGGGCAC 58.761 55.000 0.00 0.00 0.00 5.01
582 1366 4.923893 TGTTCTTGCATGTTCTTTGTCAG 58.076 39.130 0.00 0.00 0.00 3.51
583 1367 4.979943 TGTTCTTGCATGTTCTTTGTCA 57.020 36.364 0.00 0.00 0.00 3.58
584 1368 8.524870 AAATATGTTCTTGCATGTTCTTTGTC 57.475 30.769 0.00 0.00 30.68 3.18
585 1369 7.599998 GGAAATATGTTCTTGCATGTTCTTTGT 59.400 33.333 0.00 0.00 30.68 2.83
586 1370 7.599621 TGGAAATATGTTCTTGCATGTTCTTTG 59.400 33.333 0.00 0.00 30.68 2.77
587 1371 7.599998 GTGGAAATATGTTCTTGCATGTTCTTT 59.400 33.333 0.00 0.00 30.68 2.52
588 1372 7.039504 AGTGGAAATATGTTCTTGCATGTTCTT 60.040 33.333 0.00 0.00 30.68 2.52
589 1373 6.435277 AGTGGAAATATGTTCTTGCATGTTCT 59.565 34.615 0.00 0.00 30.68 3.01
590 1374 6.624423 AGTGGAAATATGTTCTTGCATGTTC 58.376 36.000 0.00 0.00 30.68 3.18
591 1375 6.594788 AGTGGAAATATGTTCTTGCATGTT 57.405 33.333 0.00 0.00 32.76 2.71
592 1376 6.015180 ACAAGTGGAAATATGTTCTTGCATGT 60.015 34.615 0.00 0.00 36.69 3.21
593 1377 6.392354 ACAAGTGGAAATATGTTCTTGCATG 58.608 36.000 0.00 0.00 36.69 4.06
594 1378 6.594788 ACAAGTGGAAATATGTTCTTGCAT 57.405 33.333 0.00 0.00 36.69 3.96
595 1379 6.403866 AACAAGTGGAAATATGTTCTTGCA 57.596 33.333 0.00 0.00 36.69 4.08
596 1380 6.934561 GAACAAGTGGAAATATGTTCTTGC 57.065 37.500 9.55 0.00 45.05 4.01
601 1385 7.502226 TGTCAGAAGAACAAGTGGAAATATGTT 59.498 33.333 0.00 0.00 38.62 2.71
602 1386 6.998074 TGTCAGAAGAACAAGTGGAAATATGT 59.002 34.615 0.00 0.00 0.00 2.29
603 1387 7.439157 TGTCAGAAGAACAAGTGGAAATATG 57.561 36.000 0.00 0.00 0.00 1.78
604 1388 8.463930 TTTGTCAGAAGAACAAGTGGAAATAT 57.536 30.769 0.00 0.00 0.00 1.28
605 1389 7.773224 TCTTTGTCAGAAGAACAAGTGGAAATA 59.227 33.333 0.00 0.00 32.95 1.40
606 1390 6.603201 TCTTTGTCAGAAGAACAAGTGGAAAT 59.397 34.615 0.00 0.00 32.95 2.17
607 1391 5.943416 TCTTTGTCAGAAGAACAAGTGGAAA 59.057 36.000 0.00 0.00 32.95 3.13
608 1392 5.496556 TCTTTGTCAGAAGAACAAGTGGAA 58.503 37.500 0.00 0.00 32.95 3.53
609 1393 5.097742 TCTTTGTCAGAAGAACAAGTGGA 57.902 39.130 0.00 0.00 32.95 4.02
610 1394 5.818136 TTCTTTGTCAGAAGAACAAGTGG 57.182 39.130 6.26 0.00 39.90 4.00
611 1395 6.694411 CCATTTCTTTGTCAGAAGAACAAGTG 59.306 38.462 8.71 6.86 43.32 3.16
612 1396 6.681368 GCCATTTCTTTGTCAGAAGAACAAGT 60.681 38.462 8.71 0.00 43.32 3.16
635 1419 2.914097 GGGGCCAGTGCATATGCC 60.914 66.667 24.54 15.47 43.26 4.40
640 1424 1.607467 GAACAAGGGGCCAGTGCAT 60.607 57.895 4.39 0.00 40.13 3.96
647 1431 0.110486 TGTCAGAAGAACAAGGGGCC 59.890 55.000 0.00 0.00 0.00 5.80
713 1510 4.081752 ACACAGCTCTAGAATCAGTTGAGG 60.082 45.833 0.00 0.00 0.00 3.86
720 1517 9.507329 AAAAATAGAAACACAGCTCTAGAATCA 57.493 29.630 0.00 0.00 0.00 2.57
844 1765 2.680339 GCAAGAAGGTTCATAGGTCTGC 59.320 50.000 0.00 0.00 0.00 4.26
963 1885 8.700051 TCTCCCTGAAAAACTGAATCTATCTAG 58.300 37.037 0.00 0.00 0.00 2.43
984 1907 7.394641 AGGATTAAACTGAATCAAACTTCTCCC 59.605 37.037 0.00 0.00 37.53 4.30
988 1911 7.327032 GTGCAGGATTAAACTGAATCAAACTTC 59.673 37.037 13.04 0.00 37.53 3.01
999 1922 1.393539 CGACGGTGCAGGATTAAACTG 59.606 52.381 6.25 6.25 38.95 3.16
1001 1924 1.392510 GACGACGGTGCAGGATTAAAC 59.607 52.381 0.00 0.00 0.00 2.01
1002 1925 1.717194 GACGACGGTGCAGGATTAAA 58.283 50.000 0.00 0.00 0.00 1.52
1004 1927 1.138036 CGACGACGGTGCAGGATTA 59.862 57.895 0.00 0.00 35.72 1.75
1005 1928 2.126071 CGACGACGGTGCAGGATT 60.126 61.111 0.00 0.00 35.72 3.01
1006 1929 3.338126 GACGACGACGGTGCAGGAT 62.338 63.158 12.58 0.00 44.46 3.24
1281 2374 1.633945 GGACAATTGACCTACCTGGGT 59.366 52.381 18.18 0.00 43.07 4.51
1307 2400 6.459066 TCTTTCTATGCGAGGAAGGAATATG 58.541 40.000 6.63 0.00 40.82 1.78
1312 2441 3.632333 TCTCTTTCTATGCGAGGAAGGA 58.368 45.455 6.63 2.86 40.82 3.36
1313 2442 4.098654 TCTTCTCTTTCTATGCGAGGAAGG 59.901 45.833 6.63 0.00 40.82 3.46
1314 2443 5.255710 TCTTCTCTTTCTATGCGAGGAAG 57.744 43.478 0.81 0.81 41.72 3.46
1318 2447 5.004922 ACCTTCTTCTCTTTCTATGCGAG 57.995 43.478 0.00 0.00 0.00 5.03
1319 2448 4.462834 TGACCTTCTTCTCTTTCTATGCGA 59.537 41.667 0.00 0.00 0.00 5.10
1320 2449 4.748892 TGACCTTCTTCTCTTTCTATGCG 58.251 43.478 0.00 0.00 0.00 4.73
1321 2450 5.934625 TGTTGACCTTCTTCTCTTTCTATGC 59.065 40.000 0.00 0.00 0.00 3.14
1322 2451 7.605691 ACATGTTGACCTTCTTCTCTTTCTATG 59.394 37.037 0.00 0.00 0.00 2.23
1326 2455 7.389053 ACATACATGTTGACCTTCTTCTCTTTC 59.611 37.037 2.30 0.00 37.90 2.62
1327 2456 7.227156 ACATACATGTTGACCTTCTTCTCTTT 58.773 34.615 2.30 0.00 37.90 2.52
1328 2457 6.773638 ACATACATGTTGACCTTCTTCTCTT 58.226 36.000 2.30 0.00 37.90 2.85
1329 2458 6.365970 ACATACATGTTGACCTTCTTCTCT 57.634 37.500 2.30 0.00 37.90 3.10
1330 2459 8.547967 TTTACATACATGTTGACCTTCTTCTC 57.452 34.615 2.30 0.00 41.97 2.87
1331 2460 8.157476 ACTTTACATACATGTTGACCTTCTTCT 58.843 33.333 2.30 0.00 41.97 2.85
1332 2461 8.324163 ACTTTACATACATGTTGACCTTCTTC 57.676 34.615 2.30 0.00 41.97 2.87
1335 2464 7.602644 TCAGACTTTACATACATGTTGACCTTC 59.397 37.037 2.30 0.00 41.97 3.46
1336 2465 7.450074 TCAGACTTTACATACATGTTGACCTT 58.550 34.615 2.30 0.00 41.97 3.50
1337 2466 7.004555 TCAGACTTTACATACATGTTGACCT 57.995 36.000 2.30 0.00 41.97 3.85
1338 2467 7.667043 TTCAGACTTTACATACATGTTGACC 57.333 36.000 2.30 0.00 41.97 4.02
1684 2872 5.680619 AGTGTGTGGAAATACTTGTCAGAA 58.319 37.500 0.00 0.00 0.00 3.02
1705 2893 2.182827 TCAATAGAGCTGCCTGTGAGT 58.817 47.619 0.00 0.00 0.00 3.41
2934 4497 4.101448 GGAGGCCATGAGCACGGT 62.101 66.667 5.01 0.00 46.50 4.83
3133 4715 4.036498 ACTTCCGACGAACTTCGATCATAT 59.964 41.667 17.97 0.00 43.74 1.78
3198 4780 5.178797 CGGTAGTGGTCTTTTGATGATCTT 58.821 41.667 0.00 0.00 0.00 2.40
3336 4928 3.798515 TGGTGTACCCTCTTTCCTACAT 58.201 45.455 0.00 0.00 34.29 2.29
3356 4948 2.108566 CCGAGAGCTGGCAGGATG 59.891 66.667 17.64 0.00 40.87 3.51
3451 6208 8.622157 GGACTTAGCTTCAGTTTTTAGTTCTTT 58.378 33.333 0.00 0.00 0.00 2.52
3455 6212 6.362248 TGGGACTTAGCTTCAGTTTTTAGTT 58.638 36.000 0.00 0.00 0.00 2.24
3456 6213 5.937111 TGGGACTTAGCTTCAGTTTTTAGT 58.063 37.500 0.00 0.00 0.00 2.24
3458 6215 7.833285 ATTTGGGACTTAGCTTCAGTTTTTA 57.167 32.000 0.00 0.00 0.00 1.52
3465 6222 4.735369 TGGAAATTTGGGACTTAGCTTCA 58.265 39.130 0.00 0.00 0.00 3.02
3466 6223 4.767409 ACTGGAAATTTGGGACTTAGCTTC 59.233 41.667 0.00 0.00 0.00 3.86
3469 6226 5.497474 TCTACTGGAAATTTGGGACTTAGC 58.503 41.667 0.00 0.00 0.00 3.09
3470 6227 7.394816 TCTTCTACTGGAAATTTGGGACTTAG 58.605 38.462 0.00 0.00 33.07 2.18
3476 6233 5.179452 TCCTCTTCTACTGGAAATTTGGG 57.821 43.478 0.00 0.00 33.07 4.12
3477 6234 4.637977 GCTCCTCTTCTACTGGAAATTTGG 59.362 45.833 0.00 0.00 33.07 3.28
3479 6236 4.289672 TGGCTCCTCTTCTACTGGAAATTT 59.710 41.667 0.00 0.00 33.07 1.82
3480 6237 3.846588 TGGCTCCTCTTCTACTGGAAATT 59.153 43.478 0.00 0.00 33.07 1.82
3483 6240 2.180276 GTGGCTCCTCTTCTACTGGAA 58.820 52.381 0.00 0.00 0.00 3.53
3484 6241 1.077169 TGTGGCTCCTCTTCTACTGGA 59.923 52.381 0.00 0.00 0.00 3.86
3485 6242 1.561643 TGTGGCTCCTCTTCTACTGG 58.438 55.000 0.00 0.00 0.00 4.00
3486 6243 2.300152 TGTTGTGGCTCCTCTTCTACTG 59.700 50.000 0.00 0.00 0.00 2.74
3487 6244 2.564947 CTGTTGTGGCTCCTCTTCTACT 59.435 50.000 0.00 0.00 0.00 2.57
3488 6245 2.563179 TCTGTTGTGGCTCCTCTTCTAC 59.437 50.000 0.00 0.00 0.00 2.59
3489 6246 2.889512 TCTGTTGTGGCTCCTCTTCTA 58.110 47.619 0.00 0.00 0.00 2.10
3491 6248 2.550830 TTCTGTTGTGGCTCCTCTTC 57.449 50.000 0.00 0.00 0.00 2.87
3494 6251 1.808945 CACATTCTGTTGTGGCTCCTC 59.191 52.381 5.85 0.00 42.63 3.71
3495 6252 1.421268 TCACATTCTGTTGTGGCTCCT 59.579 47.619 11.54 0.00 45.63 3.69
3496 6253 1.808945 CTCACATTCTGTTGTGGCTCC 59.191 52.381 11.54 0.00 45.63 4.70
3497 6254 2.498167 ACTCACATTCTGTTGTGGCTC 58.502 47.619 11.54 0.00 45.63 4.70
3498 6255 2.645838 ACTCACATTCTGTTGTGGCT 57.354 45.000 11.54 0.00 45.63 4.75
3499 6256 4.379813 CCATAACTCACATTCTGTTGTGGC 60.380 45.833 7.66 0.00 45.63 5.01
3500 6257 5.300969 CCATAACTCACATTCTGTTGTGG 57.699 43.478 11.54 6.50 45.63 4.17
3501 6258 4.669965 CGCCATAACTCACATTCTGTTGTG 60.670 45.833 7.02 7.02 46.70 3.33
3503 6260 3.684305 TCGCCATAACTCACATTCTGTTG 59.316 43.478 0.00 0.00 0.00 3.33
3506 6263 3.525537 ACTCGCCATAACTCACATTCTG 58.474 45.455 0.00 0.00 0.00 3.02
3509 6266 5.057149 GGAATACTCGCCATAACTCACATT 58.943 41.667 0.00 0.00 0.00 2.71
3510 6267 4.100963 TGGAATACTCGCCATAACTCACAT 59.899 41.667 0.00 0.00 0.00 3.21
3511 6268 3.449377 TGGAATACTCGCCATAACTCACA 59.551 43.478 0.00 0.00 0.00 3.58
3512 6269 4.054780 TGGAATACTCGCCATAACTCAC 57.945 45.455 0.00 0.00 0.00 3.51
3513 6270 4.955811 ATGGAATACTCGCCATAACTCA 57.044 40.909 0.00 0.00 42.86 3.41
3514 6271 6.398918 ACATATGGAATACTCGCCATAACTC 58.601 40.000 7.80 0.00 46.82 3.01
3515 6272 6.360370 ACATATGGAATACTCGCCATAACT 57.640 37.500 7.80 0.00 46.82 2.24
3516 6273 7.435068 AAACATATGGAATACTCGCCATAAC 57.565 36.000 7.80 0.00 46.82 1.89
3517 6274 9.378551 GATAAACATATGGAATACTCGCCATAA 57.621 33.333 7.80 0.00 46.82 1.90
3519 6276 7.394016 TGATAAACATATGGAATACTCGCCAT 58.606 34.615 7.80 0.00 46.21 4.40
3520 6277 6.764379 TGATAAACATATGGAATACTCGCCA 58.236 36.000 7.80 0.00 38.78 5.69
3521 6278 6.183360 GCTGATAAACATATGGAATACTCGCC 60.183 42.308 7.80 0.00 0.00 5.54
3522 6279 6.368791 TGCTGATAAACATATGGAATACTCGC 59.631 38.462 7.80 1.70 0.00 5.03
3523 6280 7.889589 TGCTGATAAACATATGGAATACTCG 57.110 36.000 7.80 0.00 0.00 4.18
3530 6287 9.365906 ACCATATTTTGCTGATAAACATATGGA 57.634 29.630 20.30 0.00 39.57 3.41
3531 6288 9.414295 CACCATATTTTGCTGATAAACATATGG 57.586 33.333 15.09 15.09 40.79 2.74
3534 6291 9.407380 ACTCACCATATTTTGCTGATAAACATA 57.593 29.630 0.00 0.00 0.00 2.29
3535 6292 8.297470 ACTCACCATATTTTGCTGATAAACAT 57.703 30.769 0.00 0.00 0.00 2.71
3536 6293 7.701539 ACTCACCATATTTTGCTGATAAACA 57.298 32.000 0.00 0.00 0.00 2.83
3539 6296 8.849168 CCATAACTCACCATATTTTGCTGATAA 58.151 33.333 0.00 0.00 0.00 1.75
3540 6297 7.998383 ACCATAACTCACCATATTTTGCTGATA 59.002 33.333 0.00 0.00 0.00 2.15
3541 6298 6.835488 ACCATAACTCACCATATTTTGCTGAT 59.165 34.615 0.00 0.00 0.00 2.90
3542 6299 6.095300 CACCATAACTCACCATATTTTGCTGA 59.905 38.462 0.00 0.00 0.00 4.26
3543 6300 6.095300 TCACCATAACTCACCATATTTTGCTG 59.905 38.462 0.00 0.00 0.00 4.41
3544 6301 6.186957 TCACCATAACTCACCATATTTTGCT 58.813 36.000 0.00 0.00 0.00 3.91
3545 6302 6.095440 ACTCACCATAACTCACCATATTTTGC 59.905 38.462 0.00 0.00 0.00 3.68
3546 6303 7.201732 GGACTCACCATAACTCACCATATTTTG 60.202 40.741 0.00 0.00 38.79 2.44
3547 6304 6.828785 GGACTCACCATAACTCACCATATTTT 59.171 38.462 0.00 0.00 38.79 1.82
3548 6305 6.357367 GGACTCACCATAACTCACCATATTT 58.643 40.000 0.00 0.00 38.79 1.40
3549 6306 5.163195 GGGACTCACCATAACTCACCATATT 60.163 44.000 0.00 0.00 41.20 1.28
3550 6307 4.348168 GGGACTCACCATAACTCACCATAT 59.652 45.833 0.00 0.00 41.20 1.78
3551 6308 3.709653 GGGACTCACCATAACTCACCATA 59.290 47.826 0.00 0.00 41.20 2.74
3552 6309 2.505819 GGGACTCACCATAACTCACCAT 59.494 50.000 0.00 0.00 41.20 3.55
3553 6310 1.906574 GGGACTCACCATAACTCACCA 59.093 52.381 0.00 0.00 41.20 4.17
3554 6311 1.209747 GGGGACTCACCATAACTCACC 59.790 57.143 0.00 0.00 41.20 4.02
3555 6312 1.906574 TGGGGACTCACCATAACTCAC 59.093 52.381 0.00 0.00 41.20 3.51
3556 6313 2.335681 TGGGGACTCACCATAACTCA 57.664 50.000 0.00 0.00 41.20 3.41
3557 6314 3.933861 ATTGGGGACTCACCATAACTC 57.066 47.619 0.00 0.00 41.20 3.01
3558 6315 4.675063 AAATTGGGGACTCACCATAACT 57.325 40.909 0.00 0.00 41.20 2.24
3559 6316 4.770010 TGAAAATTGGGGACTCACCATAAC 59.230 41.667 0.00 0.00 41.20 1.89
3560 6317 5.004361 TGAAAATTGGGGACTCACCATAA 57.996 39.130 0.00 0.00 41.20 1.90
3561 6318 4.044065 ACTGAAAATTGGGGACTCACCATA 59.956 41.667 0.00 0.00 41.20 2.74
3562 6319 3.181418 ACTGAAAATTGGGGACTCACCAT 60.181 43.478 0.00 0.00 41.20 3.55
3563 6320 2.176798 ACTGAAAATTGGGGACTCACCA 59.823 45.455 0.00 0.00 41.20 4.17
3564 6321 2.876581 ACTGAAAATTGGGGACTCACC 58.123 47.619 0.00 0.00 38.08 4.02
3565 6322 4.906618 TCTACTGAAAATTGGGGACTCAC 58.093 43.478 0.00 0.00 0.00 3.51
3566 6323 5.309543 TCTTCTACTGAAAATTGGGGACTCA 59.690 40.000 0.00 0.00 0.00 3.41
3567 6324 5.805728 TCTTCTACTGAAAATTGGGGACTC 58.194 41.667 0.00 0.00 0.00 3.36
3568 6325 5.280727 CCTCTTCTACTGAAAATTGGGGACT 60.281 44.000 0.00 0.00 0.00 3.85
3569 6326 4.944317 CCTCTTCTACTGAAAATTGGGGAC 59.056 45.833 0.00 0.00 0.00 4.46
3570 6327 4.849810 TCCTCTTCTACTGAAAATTGGGGA 59.150 41.667 0.00 0.00 0.00 4.81
3571 6328 5.179452 TCCTCTTCTACTGAAAATTGGGG 57.821 43.478 0.00 0.00 0.00 4.96
3572 6329 6.003950 TGTTCCTCTTCTACTGAAAATTGGG 58.996 40.000 0.00 0.00 0.00 4.12
3573 6330 7.510549 TTGTTCCTCTTCTACTGAAAATTGG 57.489 36.000 0.00 0.00 0.00 3.16
3574 6331 9.801873 TTTTTGTTCCTCTTCTACTGAAAATTG 57.198 29.630 0.00 0.00 0.00 2.32
3576 6333 9.971922 CATTTTTGTTCCTCTTCTACTGAAAAT 57.028 29.630 0.00 0.00 0.00 1.82
3577 6334 7.920682 GCATTTTTGTTCCTCTTCTACTGAAAA 59.079 33.333 0.00 0.00 0.00 2.29
3578 6335 7.285401 AGCATTTTTGTTCCTCTTCTACTGAAA 59.715 33.333 0.00 0.00 0.00 2.69
3579 6336 6.772716 AGCATTTTTGTTCCTCTTCTACTGAA 59.227 34.615 0.00 0.00 0.00 3.02
3580 6337 6.299141 AGCATTTTTGTTCCTCTTCTACTGA 58.701 36.000 0.00 0.00 0.00 3.41
3581 6338 6.566197 AGCATTTTTGTTCCTCTTCTACTG 57.434 37.500 0.00 0.00 0.00 2.74
3582 6339 8.870075 ATAAGCATTTTTGTTCCTCTTCTACT 57.130 30.769 0.00 0.00 0.00 2.57
3583 6340 8.730680 TGATAAGCATTTTTGTTCCTCTTCTAC 58.269 33.333 0.00 0.00 0.00 2.59
3584 6341 8.862325 TGATAAGCATTTTTGTTCCTCTTCTA 57.138 30.769 0.00 0.00 0.00 2.10
3585 6342 7.576477 GCTGATAAGCATTTTTGTTCCTCTTCT 60.576 37.037 0.00 0.00 34.41 2.85
3586 6343 6.529477 GCTGATAAGCATTTTTGTTCCTCTTC 59.471 38.462 0.00 0.00 34.41 2.87
3587 6344 6.015180 TGCTGATAAGCATTTTTGTTCCTCTT 60.015 34.615 0.00 0.00 40.23 2.85
3588 6345 5.477984 TGCTGATAAGCATTTTTGTTCCTCT 59.522 36.000 0.00 0.00 40.23 3.69
3589 6346 5.713025 TGCTGATAAGCATTTTTGTTCCTC 58.287 37.500 0.00 0.00 40.23 3.71
3590 6347 5.726980 TGCTGATAAGCATTTTTGTTCCT 57.273 34.783 0.00 0.00 40.23 3.36
3591 6348 6.783892 TTTGCTGATAAGCATTTTTGTTCC 57.216 33.333 5.32 0.00 44.94 3.62
3595 6352 9.217223 GCATTATTTTGCTGATAAGCATTTTTG 57.783 29.630 5.32 1.20 44.94 2.44
3609 6366 7.436118 TCTTGACTTCTTTGCATTATTTTGCT 58.564 30.769 0.00 0.00 43.18 3.91
3642 6399 4.261572 GCATGTCTTCAAACTTGTGCCTAA 60.262 41.667 0.00 0.00 0.00 2.69
3755 6512 9.578576 CCAAAAGGAGGATATGAAGATGAATAA 57.421 33.333 0.00 0.00 0.00 1.40
3756 6513 8.166061 CCCAAAAGGAGGATATGAAGATGAATA 58.834 37.037 0.00 0.00 38.24 1.75
3757 6514 7.008941 CCCAAAAGGAGGATATGAAGATGAAT 58.991 38.462 0.00 0.00 38.24 2.57
3758 6515 6.367983 CCCAAAAGGAGGATATGAAGATGAA 58.632 40.000 0.00 0.00 38.24 2.57
3759 6516 5.691167 GCCCAAAAGGAGGATATGAAGATGA 60.691 44.000 0.00 0.00 38.24 2.92
3760 6517 4.522022 GCCCAAAAGGAGGATATGAAGATG 59.478 45.833 0.00 0.00 38.24 2.90
3761 6518 4.448347 GGCCCAAAAGGAGGATATGAAGAT 60.448 45.833 0.00 0.00 38.24 2.40
3762 6519 3.117512 GGCCCAAAAGGAGGATATGAAGA 60.118 47.826 0.00 0.00 38.24 2.87
3763 6520 3.225940 GGCCCAAAAGGAGGATATGAAG 58.774 50.000 0.00 0.00 38.24 3.02
3764 6521 2.584965 TGGCCCAAAAGGAGGATATGAA 59.415 45.455 0.00 0.00 38.24 2.57
3765 6522 2.213310 TGGCCCAAAAGGAGGATATGA 58.787 47.619 0.00 0.00 38.24 2.15
3766 6523 2.754012 TGGCCCAAAAGGAGGATATG 57.246 50.000 0.00 0.00 38.24 1.78
3767 6524 2.791179 TGATGGCCCAAAAGGAGGATAT 59.209 45.455 0.00 0.00 38.24 1.63
3768 6525 2.213310 TGATGGCCCAAAAGGAGGATA 58.787 47.619 0.00 0.00 38.24 2.59
3769 6526 1.009997 TGATGGCCCAAAAGGAGGAT 58.990 50.000 0.00 0.00 38.24 3.24
3770 6527 0.783206 TTGATGGCCCAAAAGGAGGA 59.217 50.000 0.00 0.00 38.24 3.71
3771 6528 1.483415 CATTGATGGCCCAAAAGGAGG 59.517 52.381 0.00 0.00 38.24 4.30
3772 6529 1.134610 GCATTGATGGCCCAAAAGGAG 60.135 52.381 0.00 0.00 38.24 3.69
3773 6530 0.903942 GCATTGATGGCCCAAAAGGA 59.096 50.000 0.00 0.00 38.24 3.36
3774 6531 0.107557 GGCATTGATGGCCCAAAAGG 60.108 55.000 0.00 0.00 45.87 3.11
3775 6532 3.464207 GGCATTGATGGCCCAAAAG 57.536 52.632 0.00 0.00 45.87 2.27
3783 6540 3.559069 AGGTAGACATTGGCATTGATGG 58.441 45.455 15.69 0.00 0.00 3.51
3784 6541 3.567164 GGAGGTAGACATTGGCATTGATG 59.433 47.826 15.69 6.26 0.00 3.07
3785 6542 3.202818 TGGAGGTAGACATTGGCATTGAT 59.797 43.478 15.69 6.72 0.00 2.57
3786 6543 2.575735 TGGAGGTAGACATTGGCATTGA 59.424 45.455 15.69 0.00 0.00 2.57
3787 6544 3.003394 TGGAGGTAGACATTGGCATTG 57.997 47.619 7.78 7.78 0.00 2.82
3788 6545 3.959495 ATGGAGGTAGACATTGGCATT 57.041 42.857 0.00 0.00 0.00 3.56
3789 6546 6.444816 TCATATATGGAGGTAGACATTGGCAT 59.555 38.462 12.78 0.00 0.00 4.40
3790 6547 5.784906 TCATATATGGAGGTAGACATTGGCA 59.215 40.000 12.78 0.00 0.00 4.92
3791 6548 6.299805 TCATATATGGAGGTAGACATTGGC 57.700 41.667 12.78 0.00 0.00 4.52
3815 6572 9.914131 CTGTCTCGTGATGGATATAGAAAATTA 57.086 33.333 0.00 0.00 0.00 1.40
3816 6573 7.875041 CCTGTCTCGTGATGGATATAGAAAATT 59.125 37.037 4.20 0.00 0.00 1.82
3817 6574 7.382110 CCTGTCTCGTGATGGATATAGAAAAT 58.618 38.462 4.20 0.00 0.00 1.82
3818 6575 6.738731 GCCTGTCTCGTGATGGATATAGAAAA 60.739 42.308 11.84 0.00 0.00 2.29
3819 6576 5.279006 GCCTGTCTCGTGATGGATATAGAAA 60.279 44.000 11.84 0.00 0.00 2.52
3820 6577 4.218635 GCCTGTCTCGTGATGGATATAGAA 59.781 45.833 11.84 0.00 0.00 2.10
3821 6578 3.759086 GCCTGTCTCGTGATGGATATAGA 59.241 47.826 11.84 0.00 0.00 1.98
3822 6579 3.507622 TGCCTGTCTCGTGATGGATATAG 59.492 47.826 11.84 0.00 0.00 1.31
3823 6580 3.496331 TGCCTGTCTCGTGATGGATATA 58.504 45.455 11.84 0.00 0.00 0.86
3824 6581 2.319844 TGCCTGTCTCGTGATGGATAT 58.680 47.619 11.84 0.00 0.00 1.63
3825 6582 1.775385 TGCCTGTCTCGTGATGGATA 58.225 50.000 11.84 0.56 0.00 2.59
3826 6583 1.126488 ATGCCTGTCTCGTGATGGAT 58.874 50.000 11.84 0.03 0.00 3.41
3827 6584 0.176449 CATGCCTGTCTCGTGATGGA 59.824 55.000 11.84 0.00 0.00 3.41
3828 6585 0.176449 TCATGCCTGTCTCGTGATGG 59.824 55.000 5.48 5.48 0.00 3.51
3829 6586 2.014335 TTCATGCCTGTCTCGTGATG 57.986 50.000 0.00 0.00 30.47 3.07
3834 6591 3.686241 TCTTTGAATTCATGCCTGTCTCG 59.314 43.478 9.40 0.00 0.00 4.04
3836 6593 4.401022 TGTCTTTGAATTCATGCCTGTCT 58.599 39.130 9.40 0.00 0.00 3.41
3936 6694 6.811665 TCGTTCCCTTATATATGATTGAAGCG 59.188 38.462 0.00 1.84 0.00 4.68
3940 6698 8.478066 CCAGATCGTTCCCTTATATATGATTGA 58.522 37.037 0.00 0.00 0.00 2.57
3941 6699 8.478066 TCCAGATCGTTCCCTTATATATGATTG 58.522 37.037 0.00 0.00 0.00 2.67
3943 6701 7.201956 GCTCCAGATCGTTCCCTTATATATGAT 60.202 40.741 0.00 0.00 0.00 2.45
3944 6702 6.096987 GCTCCAGATCGTTCCCTTATATATGA 59.903 42.308 0.00 0.00 0.00 2.15
3946 6704 6.198639 AGCTCCAGATCGTTCCCTTATATAT 58.801 40.000 0.00 0.00 0.00 0.86
3947 6705 5.580998 AGCTCCAGATCGTTCCCTTATATA 58.419 41.667 0.00 0.00 0.00 0.86
3948 6706 4.421131 AGCTCCAGATCGTTCCCTTATAT 58.579 43.478 0.00 0.00 0.00 0.86
3978 6742 6.076981 ACTTGCTTGAACACCTATTTCTTG 57.923 37.500 0.00 0.00 0.00 3.02
4013 6777 7.688372 AGTAGCACATTTACGATCATCTTTTG 58.312 34.615 0.00 0.00 0.00 2.44
4025 6789 9.319143 ACATTAGATCTGAAGTAGCACATTTAC 57.681 33.333 5.18 0.00 0.00 2.01
4098 6862 9.511272 TGTCTACATACATCCGTATATTGTAGT 57.489 33.333 0.00 0.00 38.60 2.73
4104 6868 9.682465 ACACTATGTCTACATACATCCGTATAT 57.318 33.333 0.00 0.00 40.52 0.86
4106 6870 7.997773 ACACTATGTCTACATACATCCGTAT 57.002 36.000 0.00 0.00 40.52 3.06
4107 6871 8.370182 TCTACACTATGTCTACATACATCCGTA 58.630 37.037 0.00 0.00 40.52 4.02
4108 6872 7.222161 TCTACACTATGTCTACATACATCCGT 58.778 38.462 0.00 0.00 40.52 4.69
4109 6873 7.668525 TCTACACTATGTCTACATACATCCG 57.331 40.000 0.00 0.00 40.52 4.18
4127 6891 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4128 6892 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4129 6893 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4130 6894 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4131 6895 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4132 6896 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4133 6897 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4134 6898 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4135 6899 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4136 6900 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4137 6901 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4138 6902 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
4139 6903 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
4140 6904 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
4141 6905 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4142 6906 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4143 6907 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
4144 6908 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
4145 6909 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
4146 6910 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
4147 6911 6.432607 TCTAACAAGTGACTACATACGGAG 57.567 41.667 0.00 0.00 0.00 4.63
4148 6912 6.822667 TTCTAACAAGTGACTACATACGGA 57.177 37.500 0.00 0.00 0.00 4.69
4149 6913 7.481642 AGATTCTAACAAGTGACTACATACGG 58.518 38.462 0.00 0.00 0.00 4.02
4150 6914 8.399425 AGAGATTCTAACAAGTGACTACATACG 58.601 37.037 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.