Multiple sequence alignment - TraesCS7A01G472900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G472900 chr7A 100.000 2523 0 0 1 2523 668988580 668986058 0.000000e+00 4660
1 TraesCS7A01G472900 chr7A 94.557 1231 50 12 1308 2523 711777753 711776525 0.000000e+00 1886
2 TraesCS7A01G472900 chr3D 94.381 2011 97 13 528 2523 70093978 70095987 0.000000e+00 3073
3 TraesCS7A01G472900 chr3D 91.329 715 43 5 528 1240 590028820 590029517 0.000000e+00 959
4 TraesCS7A01G472900 chr3D 95.714 70 1 1 2454 2523 93051185 93051118 7.380000e-21 111
5 TraesCS7A01G472900 chr3D 94.366 71 3 1 2454 2523 606331070 606331000 9.540000e-20 108
6 TraesCS7A01G472900 chr3D 94.286 70 2 1 2454 2523 425482193 425482126 3.430000e-19 106
7 TraesCS7A01G472900 chr5D 94.720 1932 92 10 528 2453 435154612 435156539 0.000000e+00 2994
8 TraesCS7A01G472900 chr5D 93.454 1268 62 7 528 1791 565841282 565842532 0.000000e+00 1862
9 TraesCS7A01G472900 chr5D 88.546 227 23 3 288 514 444540625 444540402 3.200000e-69 272
10 TraesCS7A01G472900 chr5D 94.286 70 2 1 2454 2523 435156665 435156732 3.430000e-19 106
11 TraesCS7A01G472900 chr1D 93.734 2011 103 20 527 2523 22594393 22592392 0.000000e+00 2994
12 TraesCS7A01G472900 chr1D 93.002 2015 88 18 528 2523 395450044 395448064 0.000000e+00 2891
13 TraesCS7A01G472900 chr3A 92.843 2012 118 17 528 2522 699108767 699110769 0.000000e+00 2894
14 TraesCS7A01G472900 chr3A 90.393 229 19 2 288 514 276866691 276866464 5.280000e-77 298
15 TraesCS7A01G472900 chr7D 94.018 1822 89 6 528 2346 503923861 503925665 0.000000e+00 2743
16 TraesCS7A01G472900 chr7D 93.969 1824 86 13 528 2346 69201959 69200155 0.000000e+00 2737
17 TraesCS7A01G472900 chr7D 93.932 1648 69 9 528 2170 629661706 629660085 0.000000e+00 2460
18 TraesCS7A01G472900 chr7D 95.317 1452 47 12 1092 2523 4429142 4430592 0.000000e+00 2285
19 TraesCS7A01G472900 chr7D 95.475 1127 47 4 1222 2346 564083125 564084249 0.000000e+00 1796
20 TraesCS7A01G472900 chr7D 91.213 478 24 4 528 1003 4428296 4428757 3.540000e-178 634
21 TraesCS7A01G472900 chr7D 94.872 78 2 1 2446 2523 69198389 69198314 1.230000e-23 121
22 TraesCS7A01G472900 chr5A 92.447 1827 103 14 715 2523 639271975 639270166 0.000000e+00 2577
23 TraesCS7A01G472900 chr5A 88.596 228 23 3 288 514 51798156 51797931 8.890000e-70 274
24 TraesCS7A01G472900 chr2A 91.453 234 17 2 288 519 736009704 736009936 4.050000e-83 318
25 TraesCS7A01G472900 chr2A 89.362 188 17 3 6 191 542656173 542656359 1.510000e-57 233
26 TraesCS7A01G472900 chr6D 91.304 230 17 1 288 514 143670112 143670341 6.780000e-81 311
27 TraesCS7A01G472900 chr6A 90.987 233 18 3 288 519 582088522 582088752 6.780000e-81 311
28 TraesCS7A01G472900 chr1A 90.265 226 20 2 290 514 17879624 17879848 6.830000e-76 294
29 TraesCS7A01G472900 chr1B 89.035 228 23 2 288 514 675450487 675450713 5.310000e-72 281
30 TraesCS7A01G472900 chr4A 87.660 235 25 3 288 519 507582270 507582037 1.150000e-68 270
31 TraesCS7A01G472900 chr3B 93.590 78 2 2 2446 2523 466682909 466682835 2.050000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G472900 chr7A 668986058 668988580 2522 True 4660.0 4660 100.0000 1 2523 1 chr7A.!!$R1 2522
1 TraesCS7A01G472900 chr7A 711776525 711777753 1228 True 1886.0 1886 94.5570 1308 2523 1 chr7A.!!$R2 1215
2 TraesCS7A01G472900 chr3D 70093978 70095987 2009 False 3073.0 3073 94.3810 528 2523 1 chr3D.!!$F1 1995
3 TraesCS7A01G472900 chr3D 590028820 590029517 697 False 959.0 959 91.3290 528 1240 1 chr3D.!!$F2 712
4 TraesCS7A01G472900 chr5D 565841282 565842532 1250 False 1862.0 1862 93.4540 528 1791 1 chr5D.!!$F1 1263
5 TraesCS7A01G472900 chr5D 435154612 435156732 2120 False 1550.0 2994 94.5030 528 2523 2 chr5D.!!$F2 1995
6 TraesCS7A01G472900 chr1D 22592392 22594393 2001 True 2994.0 2994 93.7340 527 2523 1 chr1D.!!$R1 1996
7 TraesCS7A01G472900 chr1D 395448064 395450044 1980 True 2891.0 2891 93.0020 528 2523 1 chr1D.!!$R2 1995
8 TraesCS7A01G472900 chr3A 699108767 699110769 2002 False 2894.0 2894 92.8430 528 2522 1 chr3A.!!$F1 1994
9 TraesCS7A01G472900 chr7D 503923861 503925665 1804 False 2743.0 2743 94.0180 528 2346 1 chr7D.!!$F1 1818
10 TraesCS7A01G472900 chr7D 629660085 629661706 1621 True 2460.0 2460 93.9320 528 2170 1 chr7D.!!$R1 1642
11 TraesCS7A01G472900 chr7D 564083125 564084249 1124 False 1796.0 1796 95.4750 1222 2346 1 chr7D.!!$F2 1124
12 TraesCS7A01G472900 chr7D 4428296 4430592 2296 False 1459.5 2285 93.2650 528 2523 2 chr7D.!!$F3 1995
13 TraesCS7A01G472900 chr7D 69198314 69201959 3645 True 1429.0 2737 94.4205 528 2523 2 chr7D.!!$R2 1995
14 TraesCS7A01G472900 chr5A 639270166 639271975 1809 True 2577.0 2577 92.4470 715 2523 1 chr5A.!!$R2 1808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
160 161 0.033228 AGATGGCGATGCTGTAGCTC 59.967 55.0 5.38 0.18 42.66 4.09 F
331 332 0.107993 CGGCCTCTGCATCAGAAAGA 60.108 55.0 0.00 0.00 40.18 2.52 F
458 459 0.322975 GCATATGGCTGGACGAGGAT 59.677 55.0 4.56 0.00 40.25 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1185 1532 0.034337 GTAAACTGGGGTCGACAGCA 59.966 55.0 18.91 0.0 39.55 4.41 R
1404 1757 0.109597 CTGCTTTAGTTGCTTGCCCG 60.110 55.0 0.00 0.0 0.00 6.13 R
1900 2257 0.916358 AACTGGGCTGGTGCTCCTAT 60.916 55.0 6.34 0.0 39.40 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.670401 GAACCACGCAGAAAGTTCAG 57.330 50.000 0.00 0.00 38.74 3.02
20 21 1.264288 GAACCACGCAGAAAGTTCAGG 59.736 52.381 0.00 0.00 38.74 3.86
21 22 0.535102 ACCACGCAGAAAGTTCAGGG 60.535 55.000 0.00 0.00 33.78 4.45
22 23 0.250295 CCACGCAGAAAGTTCAGGGA 60.250 55.000 7.37 0.00 32.32 4.20
23 24 1.593196 CACGCAGAAAGTTCAGGGAA 58.407 50.000 7.37 0.00 32.32 3.97
24 25 1.264288 CACGCAGAAAGTTCAGGGAAC 59.736 52.381 7.37 0.94 42.25 3.62
25 26 1.134220 ACGCAGAAAGTTCAGGGAACA 60.134 47.619 11.28 0.00 44.11 3.18
26 27 1.532868 CGCAGAAAGTTCAGGGAACAG 59.467 52.381 11.28 0.00 44.11 3.16
27 28 1.882623 GCAGAAAGTTCAGGGAACAGG 59.117 52.381 11.28 0.00 44.11 4.00
28 29 1.882623 CAGAAAGTTCAGGGAACAGGC 59.117 52.381 11.28 0.71 44.11 4.85
29 30 1.777272 AGAAAGTTCAGGGAACAGGCT 59.223 47.619 11.28 2.75 44.11 4.58
30 31 2.155279 GAAAGTTCAGGGAACAGGCTC 58.845 52.381 11.28 0.00 44.11 4.70
31 32 0.402121 AAGTTCAGGGAACAGGCTCC 59.598 55.000 11.28 0.00 44.11 4.70
32 33 0.768221 AGTTCAGGGAACAGGCTCCA 60.768 55.000 11.28 0.00 44.11 3.86
33 34 0.606673 GTTCAGGGAACAGGCTCCAC 60.607 60.000 4.33 0.00 41.62 4.02
34 35 1.059584 TTCAGGGAACAGGCTCCACA 61.060 55.000 0.00 0.00 37.20 4.17
35 36 1.302832 CAGGGAACAGGCTCCACAC 60.303 63.158 0.00 0.00 37.20 3.82
36 37 1.770110 AGGGAACAGGCTCCACACA 60.770 57.895 0.00 0.00 37.20 3.72
37 38 1.600916 GGGAACAGGCTCCACACAC 60.601 63.158 0.00 0.00 37.20 3.82
38 39 1.961277 GGAACAGGCTCCACACACG 60.961 63.158 0.00 0.00 35.36 4.49
39 40 1.069090 GAACAGGCTCCACACACGA 59.931 57.895 0.00 0.00 0.00 4.35
40 41 0.946221 GAACAGGCTCCACACACGAG 60.946 60.000 0.00 0.00 0.00 4.18
45 46 4.251760 CTCCACACACGAGCACTC 57.748 61.111 0.00 0.00 0.00 3.51
46 47 1.373497 CTCCACACACGAGCACTCC 60.373 63.158 0.00 0.00 0.00 3.85
47 48 2.357517 CCACACACGAGCACTCCC 60.358 66.667 0.00 0.00 0.00 4.30
48 49 2.421314 CACACACGAGCACTCCCA 59.579 61.111 0.00 0.00 0.00 4.37
49 50 1.227527 CACACACGAGCACTCCCAA 60.228 57.895 0.00 0.00 0.00 4.12
50 51 1.227556 ACACACGAGCACTCCCAAC 60.228 57.895 0.00 0.00 0.00 3.77
51 52 2.029073 ACACGAGCACTCCCAACG 59.971 61.111 0.00 0.00 0.00 4.10
52 53 3.414700 CACGAGCACTCCCAACGC 61.415 66.667 0.00 0.00 0.00 4.84
53 54 3.616721 ACGAGCACTCCCAACGCT 61.617 61.111 0.00 0.00 39.12 5.07
54 55 2.811317 CGAGCACTCCCAACGCTC 60.811 66.667 0.00 0.00 46.91 5.03
55 56 2.435059 GAGCACTCCCAACGCTCC 60.435 66.667 0.00 0.00 45.14 4.70
56 57 3.959991 GAGCACTCCCAACGCTCCC 62.960 68.421 0.00 0.00 45.14 4.30
73 74 2.125753 CGCAGGAGCTGAGGACAC 60.126 66.667 0.00 0.00 39.10 3.67
74 75 2.935740 CGCAGGAGCTGAGGACACA 61.936 63.158 0.00 0.00 39.10 3.72
75 76 1.372683 GCAGGAGCTGAGGACACAA 59.627 57.895 0.00 0.00 37.91 3.33
76 77 0.250467 GCAGGAGCTGAGGACACAAA 60.250 55.000 0.00 0.00 37.91 2.83
77 78 1.517242 CAGGAGCTGAGGACACAAAC 58.483 55.000 0.00 0.00 32.44 2.93
78 79 1.131638 AGGAGCTGAGGACACAAACA 58.868 50.000 0.00 0.00 0.00 2.83
79 80 1.071385 AGGAGCTGAGGACACAAACAG 59.929 52.381 0.00 0.00 0.00 3.16
80 81 1.202698 GGAGCTGAGGACACAAACAGT 60.203 52.381 0.00 0.00 33.57 3.55
81 82 2.565841 GAGCTGAGGACACAAACAGTT 58.434 47.619 0.00 0.00 33.57 3.16
82 83 2.945668 GAGCTGAGGACACAAACAGTTT 59.054 45.455 0.00 0.00 33.57 2.66
83 84 4.127171 GAGCTGAGGACACAAACAGTTTA 58.873 43.478 0.00 0.00 33.57 2.01
84 85 4.523083 AGCTGAGGACACAAACAGTTTAA 58.477 39.130 0.00 0.00 33.57 1.52
85 86 4.947388 AGCTGAGGACACAAACAGTTTAAA 59.053 37.500 0.00 0.00 33.57 1.52
86 87 5.034797 GCTGAGGACACAAACAGTTTAAAC 58.965 41.667 10.47 10.47 33.57 2.01
87 88 5.570234 TGAGGACACAAACAGTTTAAACC 57.430 39.130 14.72 1.05 0.00 3.27
88 89 5.010933 TGAGGACACAAACAGTTTAAACCA 58.989 37.500 14.72 0.00 0.00 3.67
89 90 5.477291 TGAGGACACAAACAGTTTAAACCAA 59.523 36.000 14.72 0.00 0.00 3.67
90 91 6.015350 TGAGGACACAAACAGTTTAAACCAAA 60.015 34.615 14.72 0.00 0.00 3.28
91 92 6.760291 AGGACACAAACAGTTTAAACCAAAA 58.240 32.000 14.72 0.00 0.00 2.44
92 93 6.871492 AGGACACAAACAGTTTAAACCAAAAG 59.129 34.615 14.72 5.58 0.00 2.27
93 94 6.091577 GGACACAAACAGTTTAAACCAAAAGG 59.908 38.462 14.72 3.75 0.00 3.11
94 95 6.760291 ACACAAACAGTTTAAACCAAAAGGA 58.240 32.000 14.72 0.00 0.00 3.36
95 96 7.217906 ACACAAACAGTTTAAACCAAAAGGAA 58.782 30.769 14.72 0.00 0.00 3.36
96 97 7.386573 ACACAAACAGTTTAAACCAAAAGGAAG 59.613 33.333 14.72 1.30 0.00 3.46
97 98 6.876789 ACAAACAGTTTAAACCAAAAGGAAGG 59.123 34.615 14.72 0.00 0.00 3.46
98 99 5.018539 ACAGTTTAAACCAAAAGGAAGGC 57.981 39.130 14.72 0.00 0.00 4.35
99 100 4.468153 ACAGTTTAAACCAAAAGGAAGGCA 59.532 37.500 14.72 0.00 0.00 4.75
100 101 5.046231 ACAGTTTAAACCAAAAGGAAGGCAA 60.046 36.000 14.72 0.00 0.00 4.52
101 102 5.293324 CAGTTTAAACCAAAAGGAAGGCAAC 59.707 40.000 14.72 0.00 0.00 4.17
102 103 5.046231 AGTTTAAACCAAAAGGAAGGCAACA 60.046 36.000 14.72 0.00 41.41 3.33
103 104 3.990959 AAACCAAAAGGAAGGCAACAA 57.009 38.095 0.00 0.00 41.41 2.83
104 105 2.979814 ACCAAAAGGAAGGCAACAAC 57.020 45.000 0.00 0.00 41.41 3.32
105 106 1.136110 ACCAAAAGGAAGGCAACAACG 59.864 47.619 0.00 0.00 41.41 4.10
106 107 1.537990 CCAAAAGGAAGGCAACAACGG 60.538 52.381 0.00 0.00 41.41 4.44
107 108 0.750249 AAAAGGAAGGCAACAACGGG 59.250 50.000 0.00 0.00 41.41 5.28
108 109 1.744320 AAAGGAAGGCAACAACGGGC 61.744 55.000 0.00 0.00 41.41 6.13
109 110 2.909965 GGAAGGCAACAACGGGCA 60.910 61.111 0.00 0.00 41.41 5.36
110 111 2.644992 GAAGGCAACAACGGGCAG 59.355 61.111 0.00 0.00 41.41 4.85
111 112 1.896660 GAAGGCAACAACGGGCAGA 60.897 57.895 0.00 0.00 41.41 4.26
112 113 1.452145 GAAGGCAACAACGGGCAGAA 61.452 55.000 0.00 0.00 41.41 3.02
113 114 1.040339 AAGGCAACAACGGGCAGAAA 61.040 50.000 0.00 0.00 41.41 2.52
114 115 1.040339 AGGCAACAACGGGCAGAAAA 61.040 50.000 0.00 0.00 41.41 2.29
115 116 0.874175 GGCAACAACGGGCAGAAAAC 60.874 55.000 0.00 0.00 0.00 2.43
116 117 0.102300 GCAACAACGGGCAGAAAACT 59.898 50.000 0.00 0.00 0.00 2.66
117 118 1.335496 GCAACAACGGGCAGAAAACTA 59.665 47.619 0.00 0.00 0.00 2.24
118 119 2.223618 GCAACAACGGGCAGAAAACTAA 60.224 45.455 0.00 0.00 0.00 2.24
119 120 3.735514 GCAACAACGGGCAGAAAACTAAA 60.736 43.478 0.00 0.00 0.00 1.85
120 121 3.982576 ACAACGGGCAGAAAACTAAAG 57.017 42.857 0.00 0.00 0.00 1.85
121 122 3.284617 ACAACGGGCAGAAAACTAAAGT 58.715 40.909 0.00 0.00 0.00 2.66
122 123 4.453751 ACAACGGGCAGAAAACTAAAGTA 58.546 39.130 0.00 0.00 0.00 2.24
123 124 4.883006 ACAACGGGCAGAAAACTAAAGTAA 59.117 37.500 0.00 0.00 0.00 2.24
124 125 5.209977 CAACGGGCAGAAAACTAAAGTAAC 58.790 41.667 0.00 0.00 0.00 2.50
125 126 3.817084 ACGGGCAGAAAACTAAAGTAACC 59.183 43.478 0.00 0.00 0.00 2.85
126 127 3.189910 CGGGCAGAAAACTAAAGTAACCC 59.810 47.826 0.00 0.00 0.00 4.11
127 128 4.404640 GGGCAGAAAACTAAAGTAACCCT 58.595 43.478 0.00 0.00 0.00 4.34
128 129 4.217767 GGGCAGAAAACTAAAGTAACCCTG 59.782 45.833 0.00 0.00 0.00 4.45
129 130 4.321008 GGCAGAAAACTAAAGTAACCCTGC 60.321 45.833 0.00 0.00 0.00 4.85
130 131 4.277423 GCAGAAAACTAAAGTAACCCTGCA 59.723 41.667 15.54 0.00 33.73 4.41
131 132 5.562890 GCAGAAAACTAAAGTAACCCTGCAG 60.563 44.000 6.78 6.78 33.73 4.41
132 133 5.531287 CAGAAAACTAAAGTAACCCTGCAGT 59.469 40.000 13.81 0.00 0.00 4.40
133 134 6.708949 CAGAAAACTAAAGTAACCCTGCAGTA 59.291 38.462 13.81 0.00 0.00 2.74
134 135 7.227910 CAGAAAACTAAAGTAACCCTGCAGTAA 59.772 37.037 13.81 0.00 0.00 2.24
135 136 7.942894 AGAAAACTAAAGTAACCCTGCAGTAAT 59.057 33.333 13.81 0.02 0.00 1.89
136 137 9.223099 GAAAACTAAAGTAACCCTGCAGTAATA 57.777 33.333 13.81 0.00 0.00 0.98
137 138 8.557592 AAACTAAAGTAACCCTGCAGTAATAC 57.442 34.615 13.81 11.75 0.00 1.89
138 139 7.492077 ACTAAAGTAACCCTGCAGTAATACT 57.508 36.000 13.81 13.73 0.00 2.12
152 153 4.310769 AGTAATACTGAAGATGGCGATGC 58.689 43.478 0.00 0.00 0.00 3.91
153 154 3.482156 AATACTGAAGATGGCGATGCT 57.518 42.857 0.00 0.00 0.00 3.79
154 155 2.229675 TACTGAAGATGGCGATGCTG 57.770 50.000 0.00 0.00 0.00 4.41
155 156 0.251354 ACTGAAGATGGCGATGCTGT 59.749 50.000 0.00 0.00 0.00 4.40
156 157 1.482182 ACTGAAGATGGCGATGCTGTA 59.518 47.619 0.00 0.00 0.00 2.74
157 158 2.133553 CTGAAGATGGCGATGCTGTAG 58.866 52.381 0.00 0.00 0.00 2.74
158 159 0.864455 GAAGATGGCGATGCTGTAGC 59.136 55.000 0.00 0.00 42.50 3.58
159 160 0.467384 AAGATGGCGATGCTGTAGCT 59.533 50.000 5.38 0.00 42.66 3.32
160 161 0.033228 AGATGGCGATGCTGTAGCTC 59.967 55.000 5.38 0.18 42.66 4.09
161 162 0.249615 GATGGCGATGCTGTAGCTCA 60.250 55.000 5.38 0.00 42.66 4.26
162 163 0.395686 ATGGCGATGCTGTAGCTCAT 59.604 50.000 5.38 0.00 42.66 2.90
163 164 1.039856 TGGCGATGCTGTAGCTCATA 58.960 50.000 5.38 0.00 42.66 2.15
164 165 1.000171 TGGCGATGCTGTAGCTCATAG 60.000 52.381 5.38 0.00 42.66 2.23
165 166 1.270826 GGCGATGCTGTAGCTCATAGA 59.729 52.381 5.38 0.00 42.66 1.98
166 167 2.094286 GGCGATGCTGTAGCTCATAGAT 60.094 50.000 5.38 0.00 42.66 1.98
167 168 3.178267 GCGATGCTGTAGCTCATAGATC 58.822 50.000 5.38 0.00 42.66 2.75
168 169 3.366781 GCGATGCTGTAGCTCATAGATCA 60.367 47.826 5.38 0.00 42.66 2.92
169 170 4.802999 CGATGCTGTAGCTCATAGATCAA 58.197 43.478 5.38 0.00 42.66 2.57
170 171 4.620609 CGATGCTGTAGCTCATAGATCAAC 59.379 45.833 5.38 0.00 42.66 3.18
171 172 5.564455 CGATGCTGTAGCTCATAGATCAACT 60.564 44.000 5.38 0.00 42.66 3.16
172 173 5.193663 TGCTGTAGCTCATAGATCAACTC 57.806 43.478 5.38 0.00 42.66 3.01
173 174 4.225984 GCTGTAGCTCATAGATCAACTCG 58.774 47.826 0.00 0.00 38.21 4.18
174 175 4.225984 CTGTAGCTCATAGATCAACTCGC 58.774 47.826 0.00 0.00 0.00 5.03
175 176 3.885901 TGTAGCTCATAGATCAACTCGCT 59.114 43.478 0.00 0.00 0.00 4.93
176 177 3.367992 AGCTCATAGATCAACTCGCTG 57.632 47.619 0.00 0.00 0.00 5.18
177 178 1.791785 GCTCATAGATCAACTCGCTGC 59.208 52.381 0.00 0.00 0.00 5.25
178 179 2.402305 CTCATAGATCAACTCGCTGCC 58.598 52.381 0.00 0.00 0.00 4.85
179 180 1.135046 CATAGATCAACTCGCTGCCG 58.865 55.000 0.00 0.00 0.00 5.69
180 181 1.032794 ATAGATCAACTCGCTGCCGA 58.967 50.000 0.00 0.00 42.01 5.54
191 192 4.778415 CTGCCGAGTCGTCCGTGG 62.778 72.222 12.31 0.00 0.00 4.94
204 205 4.698651 CGTGGCCGCAACGCAAAT 62.699 61.111 18.18 0.00 33.79 2.32
205 206 2.804931 GTGGCCGCAACGCAAATC 60.805 61.111 12.58 0.00 0.00 2.17
206 207 3.290608 TGGCCGCAACGCAAATCA 61.291 55.556 0.00 0.00 0.00 2.57
207 208 2.181525 GGCCGCAACGCAAATCAT 59.818 55.556 0.00 0.00 0.00 2.45
208 209 1.873572 GGCCGCAACGCAAATCATC 60.874 57.895 0.00 0.00 0.00 2.92
209 210 1.154054 GCCGCAACGCAAATCATCA 60.154 52.632 0.00 0.00 0.00 3.07
210 211 1.405469 GCCGCAACGCAAATCATCAC 61.405 55.000 0.00 0.00 0.00 3.06
211 212 0.798009 CCGCAACGCAAATCATCACC 60.798 55.000 0.00 0.00 0.00 4.02
212 213 0.109827 CGCAACGCAAATCATCACCA 60.110 50.000 0.00 0.00 0.00 4.17
213 214 1.467883 CGCAACGCAAATCATCACCAT 60.468 47.619 0.00 0.00 0.00 3.55
214 215 1.921887 GCAACGCAAATCATCACCATG 59.078 47.619 0.00 0.00 0.00 3.66
215 216 2.671914 GCAACGCAAATCATCACCATGT 60.672 45.455 0.00 0.00 0.00 3.21
216 217 3.577667 CAACGCAAATCATCACCATGTT 58.422 40.909 0.00 0.00 0.00 2.71
217 218 3.220507 ACGCAAATCATCACCATGTTG 57.779 42.857 0.00 0.00 0.00 3.33
218 219 2.557924 ACGCAAATCATCACCATGTTGT 59.442 40.909 0.00 0.00 0.00 3.32
219 220 3.005684 ACGCAAATCATCACCATGTTGTT 59.994 39.130 0.00 0.00 0.00 2.83
220 221 3.365520 CGCAAATCATCACCATGTTGTTG 59.634 43.478 0.00 0.00 0.00 3.33
221 222 3.123959 GCAAATCATCACCATGTTGTTGC 59.876 43.478 0.87 0.87 36.21 4.17
222 223 3.598019 AATCATCACCATGTTGTTGCC 57.402 42.857 0.00 0.00 0.00 4.52
223 224 1.992538 TCATCACCATGTTGTTGCCA 58.007 45.000 0.00 0.00 0.00 4.92
224 225 1.612950 TCATCACCATGTTGTTGCCAC 59.387 47.619 0.00 0.00 0.00 5.01
225 226 1.614903 CATCACCATGTTGTTGCCACT 59.385 47.619 0.00 0.00 0.00 4.00
226 227 2.647683 TCACCATGTTGTTGCCACTA 57.352 45.000 0.00 0.00 0.00 2.74
227 228 3.153369 TCACCATGTTGTTGCCACTAT 57.847 42.857 0.00 0.00 0.00 2.12
228 229 3.081061 TCACCATGTTGTTGCCACTATC 58.919 45.455 0.00 0.00 0.00 2.08
229 230 3.084039 CACCATGTTGTTGCCACTATCT 58.916 45.455 0.00 0.00 0.00 1.98
230 231 3.127548 CACCATGTTGTTGCCACTATCTC 59.872 47.826 0.00 0.00 0.00 2.75
231 232 3.009473 ACCATGTTGTTGCCACTATCTCT 59.991 43.478 0.00 0.00 0.00 3.10
232 233 3.624861 CCATGTTGTTGCCACTATCTCTC 59.375 47.826 0.00 0.00 0.00 3.20
233 234 4.256110 CATGTTGTTGCCACTATCTCTCA 58.744 43.478 0.00 0.00 0.00 3.27
234 235 3.930336 TGTTGTTGCCACTATCTCTCAG 58.070 45.455 0.00 0.00 0.00 3.35
235 236 2.675348 GTTGTTGCCACTATCTCTCAGC 59.325 50.000 0.00 0.00 0.00 4.26
236 237 1.901833 TGTTGCCACTATCTCTCAGCA 59.098 47.619 0.00 0.00 0.00 4.41
237 238 2.502947 TGTTGCCACTATCTCTCAGCAT 59.497 45.455 0.00 0.00 0.00 3.79
238 239 3.129871 GTTGCCACTATCTCTCAGCATC 58.870 50.000 0.00 0.00 0.00 3.91
239 240 2.675583 TGCCACTATCTCTCAGCATCT 58.324 47.619 0.00 0.00 0.00 2.90
240 241 3.036819 TGCCACTATCTCTCAGCATCTT 58.963 45.455 0.00 0.00 0.00 2.40
241 242 3.069300 TGCCACTATCTCTCAGCATCTTC 59.931 47.826 0.00 0.00 0.00 2.87
242 243 3.856638 GCCACTATCTCTCAGCATCTTCG 60.857 52.174 0.00 0.00 0.00 3.79
243 244 3.317711 CCACTATCTCTCAGCATCTTCGT 59.682 47.826 0.00 0.00 0.00 3.85
244 245 4.517075 CCACTATCTCTCAGCATCTTCGTA 59.483 45.833 0.00 0.00 0.00 3.43
245 246 5.448438 CACTATCTCTCAGCATCTTCGTAC 58.552 45.833 0.00 0.00 0.00 3.67
246 247 4.517453 ACTATCTCTCAGCATCTTCGTACC 59.483 45.833 0.00 0.00 0.00 3.34
247 248 2.025155 TCTCTCAGCATCTTCGTACCC 58.975 52.381 0.00 0.00 0.00 3.69
248 249 1.067821 CTCTCAGCATCTTCGTACCCC 59.932 57.143 0.00 0.00 0.00 4.95
249 250 0.249073 CTCAGCATCTTCGTACCCCG 60.249 60.000 0.00 0.00 38.13 5.73
250 251 1.883084 CAGCATCTTCGTACCCCGC 60.883 63.158 0.00 0.00 36.19 6.13
251 252 2.058595 AGCATCTTCGTACCCCGCT 61.059 57.895 0.00 0.00 36.19 5.52
252 253 1.591863 GCATCTTCGTACCCCGCTC 60.592 63.158 0.00 0.00 36.19 5.03
253 254 1.067582 CATCTTCGTACCCCGCTCC 59.932 63.158 0.00 0.00 36.19 4.70
254 255 1.380785 ATCTTCGTACCCCGCTCCA 60.381 57.895 0.00 0.00 36.19 3.86
255 256 0.759436 ATCTTCGTACCCCGCTCCAT 60.759 55.000 0.00 0.00 36.19 3.41
256 257 1.067582 CTTCGTACCCCGCTCCATC 59.932 63.158 0.00 0.00 36.19 3.51
257 258 2.679132 CTTCGTACCCCGCTCCATCG 62.679 65.000 0.00 0.00 36.19 3.84
258 259 4.944372 CGTACCCCGCTCCATCGC 62.944 72.222 0.00 0.00 0.00 4.58
259 260 4.603946 GTACCCCGCTCCATCGCC 62.604 72.222 0.00 0.00 0.00 5.54
260 261 4.853142 TACCCCGCTCCATCGCCT 62.853 66.667 0.00 0.00 0.00 5.52
263 264 4.899239 CCCGCTCCATCGCCTCAC 62.899 72.222 0.00 0.00 0.00 3.51
274 275 3.474570 GCCTCACGATCTGCCCCT 61.475 66.667 0.00 0.00 0.00 4.79
275 276 3.036429 GCCTCACGATCTGCCCCTT 62.036 63.158 0.00 0.00 0.00 3.95
276 277 1.604378 CCTCACGATCTGCCCCTTT 59.396 57.895 0.00 0.00 0.00 3.11
277 278 0.462759 CCTCACGATCTGCCCCTTTC 60.463 60.000 0.00 0.00 0.00 2.62
278 279 0.250234 CTCACGATCTGCCCCTTTCA 59.750 55.000 0.00 0.00 0.00 2.69
279 280 0.911769 TCACGATCTGCCCCTTTCAT 59.088 50.000 0.00 0.00 0.00 2.57
280 281 1.019673 CACGATCTGCCCCTTTCATG 58.980 55.000 0.00 0.00 0.00 3.07
281 282 0.911769 ACGATCTGCCCCTTTCATGA 59.088 50.000 0.00 0.00 0.00 3.07
282 283 1.134280 ACGATCTGCCCCTTTCATGAG 60.134 52.381 0.00 0.00 0.00 2.90
283 284 1.139654 CGATCTGCCCCTTTCATGAGA 59.860 52.381 0.00 0.00 0.00 3.27
284 285 2.570135 GATCTGCCCCTTTCATGAGAC 58.430 52.381 0.00 0.00 0.00 3.36
285 286 1.661463 TCTGCCCCTTTCATGAGACT 58.339 50.000 0.00 0.00 0.00 3.24
286 287 2.832838 TCTGCCCCTTTCATGAGACTA 58.167 47.619 0.00 0.00 0.00 2.59
287 288 3.387962 TCTGCCCCTTTCATGAGACTAT 58.612 45.455 0.00 0.00 0.00 2.12
288 289 3.782523 TCTGCCCCTTTCATGAGACTATT 59.217 43.478 0.00 0.00 0.00 1.73
289 290 4.228210 TCTGCCCCTTTCATGAGACTATTT 59.772 41.667 0.00 0.00 0.00 1.40
290 291 4.934356 TGCCCCTTTCATGAGACTATTTT 58.066 39.130 0.00 0.00 0.00 1.82
291 292 5.332743 TGCCCCTTTCATGAGACTATTTTT 58.667 37.500 0.00 0.00 0.00 1.94
320 321 3.866582 GTCATCCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
326 327 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
327 328 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
328 329 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
329 330 1.078214 CCGGCCTCTGCATCAGAAA 60.078 57.895 0.00 0.00 40.18 2.52
330 331 1.094073 CCGGCCTCTGCATCAGAAAG 61.094 60.000 0.00 0.00 40.18 2.62
331 332 0.107993 CGGCCTCTGCATCAGAAAGA 60.108 55.000 0.00 0.00 40.18 2.52
332 333 1.474677 CGGCCTCTGCATCAGAAAGAT 60.475 52.381 0.00 0.00 40.18 2.40
341 342 2.983166 CATCAGAAAGATGCATGCGAC 58.017 47.619 14.09 9.49 46.90 5.19
342 343 1.372582 TCAGAAAGATGCATGCGACC 58.627 50.000 14.09 4.40 0.00 4.79
343 344 1.089112 CAGAAAGATGCATGCGACCA 58.911 50.000 14.09 0.00 0.00 4.02
344 345 1.089920 AGAAAGATGCATGCGACCAC 58.910 50.000 14.09 2.96 0.00 4.16
345 346 1.089920 GAAAGATGCATGCGACCACT 58.910 50.000 14.09 4.75 0.00 4.00
346 347 1.470098 GAAAGATGCATGCGACCACTT 59.530 47.619 14.09 10.44 0.00 3.16
347 348 1.538047 AAGATGCATGCGACCACTTT 58.462 45.000 14.09 0.00 0.00 2.66
348 349 2.401583 AGATGCATGCGACCACTTTA 57.598 45.000 14.09 0.00 0.00 1.85
349 350 2.923121 AGATGCATGCGACCACTTTAT 58.077 42.857 14.09 0.00 0.00 1.40
350 351 3.282021 AGATGCATGCGACCACTTTATT 58.718 40.909 14.09 0.00 0.00 1.40
351 352 4.450976 AGATGCATGCGACCACTTTATTA 58.549 39.130 14.09 0.00 0.00 0.98
352 353 4.881273 AGATGCATGCGACCACTTTATTAA 59.119 37.500 14.09 0.00 0.00 1.40
353 354 5.356751 AGATGCATGCGACCACTTTATTAAA 59.643 36.000 14.09 0.00 0.00 1.52
354 355 5.378292 TGCATGCGACCACTTTATTAAAA 57.622 34.783 14.09 0.00 0.00 1.52
355 356 5.773575 TGCATGCGACCACTTTATTAAAAA 58.226 33.333 14.09 0.00 0.00 1.94
356 357 5.861251 TGCATGCGACCACTTTATTAAAAAG 59.139 36.000 14.09 7.94 0.00 2.27
357 358 5.220209 GCATGCGACCACTTTATTAAAAAGC 60.220 40.000 0.00 0.00 0.00 3.51
358 359 4.800784 TGCGACCACTTTATTAAAAAGCC 58.199 39.130 8.92 0.00 0.00 4.35
359 360 3.849708 GCGACCACTTTATTAAAAAGCCG 59.150 43.478 8.92 0.00 0.00 5.52
360 361 4.378666 GCGACCACTTTATTAAAAAGCCGA 60.379 41.667 8.92 0.00 0.00 5.54
361 362 5.084055 CGACCACTTTATTAAAAAGCCGAC 58.916 41.667 8.92 0.00 0.00 4.79
362 363 5.334260 CGACCACTTTATTAAAAAGCCGACA 60.334 40.000 8.92 0.00 0.00 4.35
363 364 6.009115 ACCACTTTATTAAAAAGCCGACAG 57.991 37.500 8.92 0.00 0.00 3.51
364 365 5.533528 ACCACTTTATTAAAAAGCCGACAGT 59.466 36.000 8.92 0.00 0.00 3.55
365 366 6.711645 ACCACTTTATTAAAAAGCCGACAGTA 59.288 34.615 8.92 0.00 0.00 2.74
366 367 7.229106 ACCACTTTATTAAAAAGCCGACAGTAA 59.771 33.333 8.92 0.00 0.00 2.24
367 368 7.536281 CCACTTTATTAAAAAGCCGACAGTAAC 59.464 37.037 8.92 0.00 0.00 2.50
368 369 8.071368 CACTTTATTAAAAAGCCGACAGTAACA 58.929 33.333 8.92 0.00 0.00 2.41
369 370 8.623030 ACTTTATTAAAAAGCCGACAGTAACAA 58.377 29.630 8.92 0.00 0.00 2.83
370 371 9.453325 CTTTATTAAAAAGCCGACAGTAACAAA 57.547 29.630 0.00 0.00 0.00 2.83
371 372 9.453325 TTTATTAAAAAGCCGACAGTAACAAAG 57.547 29.630 0.00 0.00 0.00 2.77
372 373 4.976224 AAAAAGCCGACAGTAACAAAGT 57.024 36.364 0.00 0.00 0.00 2.66
373 374 4.547406 AAAAGCCGACAGTAACAAAGTC 57.453 40.909 0.00 0.00 0.00 3.01
374 375 3.470645 AAGCCGACAGTAACAAAGTCT 57.529 42.857 0.00 0.00 0.00 3.24
375 376 2.755650 AGCCGACAGTAACAAAGTCTG 58.244 47.619 0.00 0.00 35.60 3.51
376 377 2.364324 AGCCGACAGTAACAAAGTCTGA 59.636 45.455 0.00 0.00 33.93 3.27
377 378 3.006967 AGCCGACAGTAACAAAGTCTGAT 59.993 43.478 0.00 0.00 33.93 2.90
378 379 3.368236 GCCGACAGTAACAAAGTCTGATC 59.632 47.826 0.00 0.00 33.93 2.92
379 380 4.810790 CCGACAGTAACAAAGTCTGATCT 58.189 43.478 0.00 0.00 33.93 2.75
380 381 4.623167 CCGACAGTAACAAAGTCTGATCTG 59.377 45.833 0.00 0.00 33.93 2.90
381 382 4.090642 CGACAGTAACAAAGTCTGATCTGC 59.909 45.833 0.00 0.00 33.93 4.26
382 383 4.960938 ACAGTAACAAAGTCTGATCTGCA 58.039 39.130 0.00 0.00 33.93 4.41
383 384 5.368145 ACAGTAACAAAGTCTGATCTGCAA 58.632 37.500 0.00 0.00 33.93 4.08
384 385 5.822519 ACAGTAACAAAGTCTGATCTGCAAA 59.177 36.000 0.00 0.00 33.93 3.68
385 386 6.017605 ACAGTAACAAAGTCTGATCTGCAAAG 60.018 38.462 0.00 0.00 33.93 2.77
386 387 6.017605 CAGTAACAAAGTCTGATCTGCAAAGT 60.018 38.462 0.00 0.00 0.00 2.66
387 388 7.171508 CAGTAACAAAGTCTGATCTGCAAAGTA 59.828 37.037 0.00 0.00 0.00 2.24
388 389 5.931441 ACAAAGTCTGATCTGCAAAGTAC 57.069 39.130 0.00 0.00 0.00 2.73
389 390 5.615289 ACAAAGTCTGATCTGCAAAGTACT 58.385 37.500 0.00 0.00 0.00 2.73
390 391 5.468072 ACAAAGTCTGATCTGCAAAGTACTG 59.532 40.000 0.00 0.00 0.00 2.74
391 392 3.594134 AGTCTGATCTGCAAAGTACTGC 58.406 45.455 0.00 0.00 42.95 4.40
392 393 3.260380 AGTCTGATCTGCAAAGTACTGCT 59.740 43.478 8.39 0.00 43.07 4.24
393 394 3.616379 GTCTGATCTGCAAAGTACTGCTC 59.384 47.826 8.39 0.00 43.07 4.26
394 395 3.259123 TCTGATCTGCAAAGTACTGCTCA 59.741 43.478 8.39 3.75 43.07 4.26
395 396 3.329386 TGATCTGCAAAGTACTGCTCAC 58.671 45.455 8.39 0.03 43.07 3.51
396 397 2.908688 TCTGCAAAGTACTGCTCACA 57.091 45.000 8.39 0.00 43.07 3.58
397 398 3.192541 TCTGCAAAGTACTGCTCACAA 57.807 42.857 8.39 0.00 43.07 3.33
398 399 3.540617 TCTGCAAAGTACTGCTCACAAA 58.459 40.909 8.39 0.00 43.07 2.83
399 400 3.944650 TCTGCAAAGTACTGCTCACAAAA 59.055 39.130 8.39 0.00 43.07 2.44
400 401 4.035558 TCTGCAAAGTACTGCTCACAAAAG 59.964 41.667 8.39 0.00 43.07 2.27
401 402 3.066621 TGCAAAGTACTGCTCACAAAAGG 59.933 43.478 8.39 0.00 43.07 3.11
402 403 3.315191 GCAAAGTACTGCTCACAAAAGGA 59.685 43.478 0.00 0.00 39.34 3.36
403 404 4.555511 GCAAAGTACTGCTCACAAAAGGAG 60.556 45.833 0.00 0.00 40.29 3.69
411 412 3.441496 CTCACAAAAGGAGCAAAGCAA 57.559 42.857 0.00 0.00 0.00 3.91
412 413 3.784338 CTCACAAAAGGAGCAAAGCAAA 58.216 40.909 0.00 0.00 0.00 3.68
413 414 4.183101 CTCACAAAAGGAGCAAAGCAAAA 58.817 39.130 0.00 0.00 0.00 2.44
414 415 4.768583 TCACAAAAGGAGCAAAGCAAAAT 58.231 34.783 0.00 0.00 0.00 1.82
415 416 5.911752 TCACAAAAGGAGCAAAGCAAAATA 58.088 33.333 0.00 0.00 0.00 1.40
416 417 6.523840 TCACAAAAGGAGCAAAGCAAAATAT 58.476 32.000 0.00 0.00 0.00 1.28
417 418 7.665690 TCACAAAAGGAGCAAAGCAAAATATA 58.334 30.769 0.00 0.00 0.00 0.86
418 419 8.147058 TCACAAAAGGAGCAAAGCAAAATATAA 58.853 29.630 0.00 0.00 0.00 0.98
419 420 8.772705 CACAAAAGGAGCAAAGCAAAATATAAA 58.227 29.630 0.00 0.00 0.00 1.40
420 421 8.992073 ACAAAAGGAGCAAAGCAAAATATAAAG 58.008 29.630 0.00 0.00 0.00 1.85
421 422 9.206870 CAAAAGGAGCAAAGCAAAATATAAAGA 57.793 29.630 0.00 0.00 0.00 2.52
422 423 8.992835 AAAGGAGCAAAGCAAAATATAAAGAG 57.007 30.769 0.00 0.00 0.00 2.85
423 424 7.709149 AGGAGCAAAGCAAAATATAAAGAGT 57.291 32.000 0.00 0.00 0.00 3.24
424 425 8.807948 AGGAGCAAAGCAAAATATAAAGAGTA 57.192 30.769 0.00 0.00 0.00 2.59
425 426 8.678199 AGGAGCAAAGCAAAATATAAAGAGTAC 58.322 33.333 0.00 0.00 0.00 2.73
426 427 8.458843 GGAGCAAAGCAAAATATAAAGAGTACA 58.541 33.333 0.00 0.00 0.00 2.90
427 428 9.840427 GAGCAAAGCAAAATATAAAGAGTACAA 57.160 29.630 0.00 0.00 0.00 2.41
440 441 4.160736 AGAGTACAAATTTCAAAGCCGC 57.839 40.909 0.00 0.00 0.00 6.53
441 442 3.568007 AGAGTACAAATTTCAAAGCCGCA 59.432 39.130 0.00 0.00 0.00 5.69
442 443 4.218417 AGAGTACAAATTTCAAAGCCGCAT 59.782 37.500 0.00 0.00 0.00 4.73
443 444 5.414454 AGAGTACAAATTTCAAAGCCGCATA 59.586 36.000 0.00 0.00 0.00 3.14
444 445 6.095440 AGAGTACAAATTTCAAAGCCGCATAT 59.905 34.615 0.00 0.00 0.00 1.78
445 446 6.035843 AGTACAAATTTCAAAGCCGCATATG 58.964 36.000 0.00 0.00 0.00 1.78
446 447 4.183101 ACAAATTTCAAAGCCGCATATGG 58.817 39.130 4.56 0.00 0.00 2.74
454 455 2.421314 CCGCATATGGCTGGACGA 59.579 61.111 4.56 0.00 41.67 4.20
455 456 1.665916 CCGCATATGGCTGGACGAG 60.666 63.158 4.56 0.00 41.67 4.18
456 457 1.665916 CGCATATGGCTGGACGAGG 60.666 63.158 4.56 0.00 41.67 4.63
457 458 1.748403 GCATATGGCTGGACGAGGA 59.252 57.895 4.56 0.00 40.25 3.71
458 459 0.322975 GCATATGGCTGGACGAGGAT 59.677 55.000 4.56 0.00 40.25 3.24
459 460 1.550524 GCATATGGCTGGACGAGGATA 59.449 52.381 4.56 0.00 40.25 2.59
460 461 2.675317 GCATATGGCTGGACGAGGATAC 60.675 54.545 4.56 0.00 40.25 2.24
461 462 2.375014 TATGGCTGGACGAGGATACA 57.625 50.000 0.00 0.00 41.41 2.29
462 463 0.753262 ATGGCTGGACGAGGATACAC 59.247 55.000 0.00 0.00 41.41 2.90
463 464 0.324368 TGGCTGGACGAGGATACACT 60.324 55.000 0.00 0.00 41.41 3.55
464 465 1.064240 TGGCTGGACGAGGATACACTA 60.064 52.381 0.00 0.00 41.41 2.74
465 466 2.029623 GGCTGGACGAGGATACACTAA 58.970 52.381 0.00 0.00 41.41 2.24
466 467 2.034812 GGCTGGACGAGGATACACTAAG 59.965 54.545 0.00 0.00 41.41 2.18
467 468 2.034812 GCTGGACGAGGATACACTAAGG 59.965 54.545 0.00 0.00 41.41 2.69
468 469 3.552875 CTGGACGAGGATACACTAAGGA 58.447 50.000 0.00 0.00 41.41 3.36
469 470 3.285484 TGGACGAGGATACACTAAGGAC 58.715 50.000 0.00 0.00 41.41 3.85
470 471 2.622470 GGACGAGGATACACTAAGGACC 59.378 54.545 0.00 0.00 41.41 4.46
471 472 3.553904 GACGAGGATACACTAAGGACCT 58.446 50.000 0.00 0.00 41.41 3.85
472 473 4.445448 GGACGAGGATACACTAAGGACCTA 60.445 50.000 0.00 0.00 41.41 3.08
473 474 5.315348 GACGAGGATACACTAAGGACCTAT 58.685 45.833 0.00 0.00 41.41 2.57
474 475 5.315348 ACGAGGATACACTAAGGACCTATC 58.685 45.833 0.00 0.00 41.41 2.08
475 476 4.701171 CGAGGATACACTAAGGACCTATCC 59.299 50.000 9.85 9.85 42.87 2.59
487 488 4.464069 GGACCTATCCTATGCAGTGATC 57.536 50.000 0.00 0.00 42.45 2.92
488 489 4.093011 GGACCTATCCTATGCAGTGATCT 58.907 47.826 0.00 0.00 42.45 2.75
489 490 4.159506 GGACCTATCCTATGCAGTGATCTC 59.840 50.000 0.00 0.00 42.45 2.75
490 491 4.093011 ACCTATCCTATGCAGTGATCTCC 58.907 47.826 0.00 0.00 0.00 3.71
491 492 4.092279 CCTATCCTATGCAGTGATCTCCA 58.908 47.826 0.00 0.00 0.00 3.86
492 493 4.715792 CCTATCCTATGCAGTGATCTCCAT 59.284 45.833 0.00 0.00 0.00 3.41
493 494 4.822685 ATCCTATGCAGTGATCTCCATC 57.177 45.455 0.00 0.00 0.00 3.51
494 495 2.902486 TCCTATGCAGTGATCTCCATCC 59.098 50.000 0.00 0.00 0.00 3.51
495 496 2.636403 CCTATGCAGTGATCTCCATCCA 59.364 50.000 0.00 0.00 0.00 3.41
496 497 3.072038 CCTATGCAGTGATCTCCATCCAA 59.928 47.826 0.00 0.00 0.00 3.53
497 498 3.657398 ATGCAGTGATCTCCATCCAAA 57.343 42.857 0.00 0.00 0.00 3.28
498 499 2.715046 TGCAGTGATCTCCATCCAAAC 58.285 47.619 0.00 0.00 0.00 2.93
499 500 2.019984 GCAGTGATCTCCATCCAAACC 58.980 52.381 0.00 0.00 0.00 3.27
500 501 2.283298 CAGTGATCTCCATCCAAACCG 58.717 52.381 0.00 0.00 0.00 4.44
501 502 1.210478 AGTGATCTCCATCCAAACCGG 59.790 52.381 0.00 0.00 0.00 5.28
502 503 1.065418 GTGATCTCCATCCAAACCGGT 60.065 52.381 0.00 0.00 35.57 5.28
503 504 1.633432 TGATCTCCATCCAAACCGGTT 59.367 47.619 15.86 15.86 35.57 4.44
504 505 2.017049 GATCTCCATCCAAACCGGTTG 58.983 52.381 23.08 14.70 36.94 3.77
505 506 1.060729 TCTCCATCCAAACCGGTTGA 58.939 50.000 23.08 15.50 39.87 3.18
506 507 1.422024 TCTCCATCCAAACCGGTTGAA 59.578 47.619 23.08 9.90 39.87 2.69
507 508 2.158593 TCTCCATCCAAACCGGTTGAAA 60.159 45.455 23.08 9.50 39.87 2.69
508 509 2.625790 CTCCATCCAAACCGGTTGAAAA 59.374 45.455 23.08 7.52 39.87 2.29
509 510 3.031736 TCCATCCAAACCGGTTGAAAAA 58.968 40.909 23.08 5.59 39.87 1.94
525 526 2.347630 AAAAACCGGGCTTACAGGC 58.652 52.632 6.32 0.00 38.06 4.85
613 615 1.290009 GCGACCTTTTGCAGCCAAT 59.710 52.632 0.00 0.00 31.51 3.16
749 751 1.147473 CACTTACTCACATGCGTGCA 58.853 50.000 5.64 0.00 43.28 4.57
750 752 1.733912 CACTTACTCACATGCGTGCAT 59.266 47.619 5.64 0.51 43.28 3.96
774 776 5.249622 TGACCCACAACTTATCCACATAAGA 59.750 40.000 8.43 0.00 43.07 2.10
781 783 5.387113 ACTTATCCACATAAGAATGCCCA 57.613 39.130 8.43 0.00 43.07 5.36
786 788 2.092212 CCACATAAGAATGCCCAGACCT 60.092 50.000 0.00 0.00 36.50 3.85
797 799 1.351080 CCCAGACCTGAGCCATCCAT 61.351 60.000 0.00 0.00 0.00 3.41
810 812 0.818445 CATCCATGAGCCTGAGCCAC 60.818 60.000 0.00 0.00 41.25 5.01
837 841 2.361771 CATTGCCTGCCTTCCCCT 59.638 61.111 0.00 0.00 0.00 4.79
838 842 1.614711 CATTGCCTGCCTTCCCCTA 59.385 57.895 0.00 0.00 0.00 3.53
840 844 0.480252 ATTGCCTGCCTTCCCCTATC 59.520 55.000 0.00 0.00 0.00 2.08
844 848 1.073397 CTGCCTTCCCCTATCCCCT 60.073 63.158 0.00 0.00 0.00 4.79
847 851 0.478942 GCCTTCCCCTATCCCCTTTC 59.521 60.000 0.00 0.00 0.00 2.62
873 878 4.263243 CCCACATTGTTCTTCCTCTTCTCT 60.263 45.833 0.00 0.00 0.00 3.10
971 1021 1.006571 CGCACTACGGTCCAGTGTT 60.007 57.895 11.54 0.00 44.30 3.32
1033 1083 2.627945 AGCGTTTGACTTGTGTGAAGA 58.372 42.857 0.00 0.00 0.00 2.87
1070 1120 1.495951 GGCGCGAGTTCGTCAAATT 59.504 52.632 12.10 0.00 42.22 1.82
1135 1482 1.747355 CCAAGCAGCTGGATCGATTTT 59.253 47.619 17.12 0.00 38.96 1.82
1183 1530 5.087323 GGTGGATCTGATCTAGGGTTCATA 58.913 45.833 16.61 0.00 0.00 2.15
1185 1532 5.777732 GTGGATCTGATCTAGGGTTCATACT 59.222 44.000 16.61 0.00 0.00 2.12
1198 1545 0.613572 TCATACTGCTGTCGACCCCA 60.614 55.000 14.12 9.01 0.00 4.96
1206 1553 0.974383 CTGTCGACCCCAGTTTACCT 59.026 55.000 14.12 0.00 0.00 3.08
1346 1699 0.865111 CGAACACGCCTCACATTTGA 59.135 50.000 0.00 0.00 0.00 2.69
1361 1714 2.028420 TTTGATGGACAGAGCCGATG 57.972 50.000 0.00 0.00 0.00 3.84
1404 1757 7.754924 TGAAGTGAAGTGTGAATTGAAGAAAAC 59.245 33.333 0.00 0.00 0.00 2.43
1490 1845 9.356433 CATTTTATTGTTGTGTCATTGCTATGA 57.644 29.630 6.75 6.75 38.45 2.15
1567 1922 6.578944 TGTTTGTCAAGCTAGTTTCAGAGTA 58.421 36.000 0.91 0.00 0.00 2.59
1576 1931 3.277416 AGTTTCAGAGTAAGGGGTCCT 57.723 47.619 0.00 0.00 33.87 3.85
1609 1964 9.640963 CAGTTATTGTGTCTAGCTAGTAGTTTT 57.359 33.333 20.10 6.03 0.00 2.43
1724 2080 3.319137 AATAGGATGCGATATGTGCGT 57.681 42.857 0.00 0.00 34.24 5.24
1750 2106 5.129634 TGCCAAGTTCTTGTAACTGAATCA 58.870 37.500 10.93 0.00 0.00 2.57
1795 2151 3.873361 TGCTCTGTTCTTGTTCTTCAGTG 59.127 43.478 0.00 0.00 0.00 3.66
1854 2211 4.334552 TCTTGCTGCCAAATAGATGTTGA 58.665 39.130 0.00 0.00 0.00 3.18
1857 2214 2.686915 GCTGCCAAATAGATGTTGAGCT 59.313 45.455 0.00 0.00 0.00 4.09
1900 2257 4.329545 GAGACAAGCCCACCCGCA 62.330 66.667 0.00 0.00 0.00 5.69
1905 2262 2.690881 AAGCCCACCCGCATAGGA 60.691 61.111 0.00 0.00 45.00 2.94
2319 2683 8.133024 TCAAACCAATATTTTTAGGAGCACAT 57.867 30.769 0.00 0.00 0.00 3.21
2320 2684 8.250332 TCAAACCAATATTTTTAGGAGCACATC 58.750 33.333 0.00 0.00 0.00 3.06
2462 4540 7.312899 CAGCACACCACGATATATATCAACTA 58.687 38.462 20.18 0.00 32.98 2.24
2464 4542 7.393515 AGCACACCACGATATATATCAACTAGA 59.606 37.037 20.18 0.00 32.98 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.264288 CCTGAACTTTCTGCGTGGTTC 59.736 52.381 0.00 0.00 38.64 3.62
1 2 1.308998 CCTGAACTTTCTGCGTGGTT 58.691 50.000 0.00 0.00 0.00 3.67
2 3 0.535102 CCCTGAACTTTCTGCGTGGT 60.535 55.000 0.00 0.00 0.00 4.16
3 4 0.250295 TCCCTGAACTTTCTGCGTGG 60.250 55.000 0.00 0.00 0.00 4.94
4 5 1.264288 GTTCCCTGAACTTTCTGCGTG 59.736 52.381 0.00 0.00 39.23 5.34
5 6 1.134220 TGTTCCCTGAACTTTCTGCGT 60.134 47.619 8.30 0.00 42.39 5.24
6 7 1.532868 CTGTTCCCTGAACTTTCTGCG 59.467 52.381 8.30 0.00 42.39 5.18
7 8 1.882623 CCTGTTCCCTGAACTTTCTGC 59.117 52.381 8.30 0.00 42.39 4.26
8 9 1.882623 GCCTGTTCCCTGAACTTTCTG 59.117 52.381 8.30 0.00 42.39 3.02
9 10 1.777272 AGCCTGTTCCCTGAACTTTCT 59.223 47.619 8.30 0.66 42.39 2.52
10 11 2.155279 GAGCCTGTTCCCTGAACTTTC 58.845 52.381 8.30 0.00 42.39 2.62
11 12 1.202940 GGAGCCTGTTCCCTGAACTTT 60.203 52.381 8.30 0.00 42.39 2.66
12 13 0.402121 GGAGCCTGTTCCCTGAACTT 59.598 55.000 8.30 0.00 42.39 2.66
13 14 0.768221 TGGAGCCTGTTCCCTGAACT 60.768 55.000 8.30 0.00 42.39 3.01
14 15 0.606673 GTGGAGCCTGTTCCCTGAAC 60.607 60.000 0.07 0.07 42.26 3.18
15 16 1.059584 TGTGGAGCCTGTTCCCTGAA 61.060 55.000 0.00 0.00 36.35 3.02
16 17 1.461268 TGTGGAGCCTGTTCCCTGA 60.461 57.895 0.00 0.00 36.35 3.86
17 18 1.302832 GTGTGGAGCCTGTTCCCTG 60.303 63.158 0.00 0.00 36.35 4.45
18 19 1.770110 TGTGTGGAGCCTGTTCCCT 60.770 57.895 0.00 0.00 36.35 4.20
19 20 1.600916 GTGTGTGGAGCCTGTTCCC 60.601 63.158 0.00 0.00 36.35 3.97
20 21 1.961277 CGTGTGTGGAGCCTGTTCC 60.961 63.158 0.00 0.00 37.77 3.62
21 22 0.946221 CTCGTGTGTGGAGCCTGTTC 60.946 60.000 0.00 0.00 0.00 3.18
22 23 1.069765 CTCGTGTGTGGAGCCTGTT 59.930 57.895 0.00 0.00 0.00 3.16
23 24 2.737180 CTCGTGTGTGGAGCCTGT 59.263 61.111 0.00 0.00 0.00 4.00
28 29 1.373497 GGAGTGCTCGTGTGTGGAG 60.373 63.158 0.00 0.00 34.62 3.86
29 30 2.734591 GGAGTGCTCGTGTGTGGA 59.265 61.111 0.00 0.00 0.00 4.02
30 31 2.357517 GGGAGTGCTCGTGTGTGG 60.358 66.667 0.00 0.00 0.00 4.17
31 32 1.227527 TTGGGAGTGCTCGTGTGTG 60.228 57.895 0.00 0.00 0.00 3.82
32 33 1.227556 GTTGGGAGTGCTCGTGTGT 60.228 57.895 0.00 0.00 0.00 3.72
33 34 2.310233 CGTTGGGAGTGCTCGTGTG 61.310 63.158 0.00 0.00 0.00 3.82
34 35 2.029073 CGTTGGGAGTGCTCGTGT 59.971 61.111 0.00 0.00 0.00 4.49
35 36 3.414700 GCGTTGGGAGTGCTCGTG 61.415 66.667 0.00 0.00 0.00 4.35
36 37 3.575351 GAGCGTTGGGAGTGCTCGT 62.575 63.158 0.00 0.00 44.80 4.18
37 38 2.811317 GAGCGTTGGGAGTGCTCG 60.811 66.667 0.00 0.00 44.80 5.03
39 40 4.021925 GGGAGCGTTGGGAGTGCT 62.022 66.667 0.00 0.00 42.73 4.40
53 54 4.382541 TCCTCAGCTCCTGCGGGA 62.383 66.667 15.16 15.16 45.42 5.14
54 55 4.154347 GTCCTCAGCTCCTGCGGG 62.154 72.222 4.71 4.71 45.42 6.13
55 56 3.385384 TGTCCTCAGCTCCTGCGG 61.385 66.667 0.00 0.00 45.42 5.69
56 57 2.125753 GTGTCCTCAGCTCCTGCG 60.126 66.667 0.00 0.00 45.42 5.18
57 58 0.250467 TTTGTGTCCTCAGCTCCTGC 60.250 55.000 0.00 0.00 40.05 4.85
58 59 1.202687 TGTTTGTGTCCTCAGCTCCTG 60.203 52.381 0.00 0.00 0.00 3.86
59 60 1.071385 CTGTTTGTGTCCTCAGCTCCT 59.929 52.381 0.00 0.00 0.00 3.69
60 61 1.202698 ACTGTTTGTGTCCTCAGCTCC 60.203 52.381 0.00 0.00 0.00 4.70
61 62 2.246719 ACTGTTTGTGTCCTCAGCTC 57.753 50.000 0.00 0.00 0.00 4.09
62 63 2.717639 AACTGTTTGTGTCCTCAGCT 57.282 45.000 0.00 0.00 0.00 4.24
63 64 4.893424 TTAAACTGTTTGTGTCCTCAGC 57.107 40.909 15.69 0.00 0.00 4.26
64 65 5.124776 TGGTTTAAACTGTTTGTGTCCTCAG 59.875 40.000 17.50 0.00 0.00 3.35
65 66 5.010933 TGGTTTAAACTGTTTGTGTCCTCA 58.989 37.500 17.50 0.26 0.00 3.86
66 67 5.570234 TGGTTTAAACTGTTTGTGTCCTC 57.430 39.130 17.50 0.00 0.00 3.71
67 68 5.986501 TTGGTTTAAACTGTTTGTGTCCT 57.013 34.783 17.50 0.00 0.00 3.85
68 69 6.091577 CCTTTTGGTTTAAACTGTTTGTGTCC 59.908 38.462 17.50 12.10 34.07 4.02
69 70 6.869388 TCCTTTTGGTTTAAACTGTTTGTGTC 59.131 34.615 17.50 4.28 41.38 3.67
70 71 6.760291 TCCTTTTGGTTTAAACTGTTTGTGT 58.240 32.000 17.50 0.00 41.38 3.72
71 72 7.148490 CCTTCCTTTTGGTTTAAACTGTTTGTG 60.148 37.037 17.50 2.84 41.38 3.33
72 73 6.876789 CCTTCCTTTTGGTTTAAACTGTTTGT 59.123 34.615 17.50 0.00 41.38 2.83
73 74 6.183360 GCCTTCCTTTTGGTTTAAACTGTTTG 60.183 38.462 17.50 6.32 41.38 2.93
74 75 5.878116 GCCTTCCTTTTGGTTTAAACTGTTT 59.122 36.000 17.50 10.98 41.38 2.83
75 76 5.046231 TGCCTTCCTTTTGGTTTAAACTGTT 60.046 36.000 17.50 0.00 41.38 3.16
76 77 4.468153 TGCCTTCCTTTTGGTTTAAACTGT 59.532 37.500 17.50 0.00 41.38 3.55
77 78 5.017294 TGCCTTCCTTTTGGTTTAAACTG 57.983 39.130 17.50 4.18 41.38 3.16
78 79 5.046231 TGTTGCCTTCCTTTTGGTTTAAACT 60.046 36.000 17.50 0.00 41.38 2.66
79 80 5.179533 TGTTGCCTTCCTTTTGGTTTAAAC 58.820 37.500 9.98 9.98 41.38 2.01
80 81 5.422214 TGTTGCCTTCCTTTTGGTTTAAA 57.578 34.783 0.00 0.00 41.38 1.52
81 82 5.179533 GTTGTTGCCTTCCTTTTGGTTTAA 58.820 37.500 0.00 0.00 41.38 1.52
82 83 4.678309 CGTTGTTGCCTTCCTTTTGGTTTA 60.678 41.667 0.00 0.00 41.38 2.01
83 84 3.605634 GTTGTTGCCTTCCTTTTGGTTT 58.394 40.909 0.00 0.00 41.38 3.27
84 85 2.418060 CGTTGTTGCCTTCCTTTTGGTT 60.418 45.455 0.00 0.00 41.38 3.67
85 86 1.136110 CGTTGTTGCCTTCCTTTTGGT 59.864 47.619 0.00 0.00 41.38 3.67
86 87 1.537990 CCGTTGTTGCCTTCCTTTTGG 60.538 52.381 0.00 0.00 42.21 3.28
87 88 1.537990 CCCGTTGTTGCCTTCCTTTTG 60.538 52.381 0.00 0.00 0.00 2.44
88 89 0.750249 CCCGTTGTTGCCTTCCTTTT 59.250 50.000 0.00 0.00 0.00 2.27
89 90 1.744320 GCCCGTTGTTGCCTTCCTTT 61.744 55.000 0.00 0.00 0.00 3.11
90 91 2.200337 GCCCGTTGTTGCCTTCCTT 61.200 57.895 0.00 0.00 0.00 3.36
91 92 2.597510 GCCCGTTGTTGCCTTCCT 60.598 61.111 0.00 0.00 0.00 3.36
92 93 2.909965 TGCCCGTTGTTGCCTTCC 60.910 61.111 0.00 0.00 0.00 3.46
93 94 1.452145 TTCTGCCCGTTGTTGCCTTC 61.452 55.000 0.00 0.00 0.00 3.46
94 95 1.040339 TTTCTGCCCGTTGTTGCCTT 61.040 50.000 0.00 0.00 0.00 4.35
95 96 1.040339 TTTTCTGCCCGTTGTTGCCT 61.040 50.000 0.00 0.00 0.00 4.75
96 97 0.874175 GTTTTCTGCCCGTTGTTGCC 60.874 55.000 0.00 0.00 0.00 4.52
97 98 0.102300 AGTTTTCTGCCCGTTGTTGC 59.898 50.000 0.00 0.00 0.00 4.17
98 99 3.701532 TTAGTTTTCTGCCCGTTGTTG 57.298 42.857 0.00 0.00 0.00 3.33
99 100 3.697542 ACTTTAGTTTTCTGCCCGTTGTT 59.302 39.130 0.00 0.00 0.00 2.83
100 101 3.284617 ACTTTAGTTTTCTGCCCGTTGT 58.715 40.909 0.00 0.00 0.00 3.32
101 102 3.982576 ACTTTAGTTTTCTGCCCGTTG 57.017 42.857 0.00 0.00 0.00 4.10
102 103 4.276678 GGTTACTTTAGTTTTCTGCCCGTT 59.723 41.667 0.00 0.00 0.00 4.44
103 104 3.817084 GGTTACTTTAGTTTTCTGCCCGT 59.183 43.478 0.00 0.00 0.00 5.28
104 105 3.189910 GGGTTACTTTAGTTTTCTGCCCG 59.810 47.826 0.00 0.00 0.00 6.13
105 106 4.217767 CAGGGTTACTTTAGTTTTCTGCCC 59.782 45.833 0.00 0.00 0.00 5.36
106 107 4.321008 GCAGGGTTACTTTAGTTTTCTGCC 60.321 45.833 0.00 0.00 0.00 4.85
107 108 4.277423 TGCAGGGTTACTTTAGTTTTCTGC 59.723 41.667 0.00 0.00 0.00 4.26
108 109 5.531287 ACTGCAGGGTTACTTTAGTTTTCTG 59.469 40.000 19.93 0.00 0.00 3.02
109 110 5.691896 ACTGCAGGGTTACTTTAGTTTTCT 58.308 37.500 19.93 0.00 0.00 2.52
110 111 7.500720 TTACTGCAGGGTTACTTTAGTTTTC 57.499 36.000 19.93 0.00 0.00 2.29
111 112 9.006839 GTATTACTGCAGGGTTACTTTAGTTTT 57.993 33.333 19.93 0.00 0.00 2.43
112 113 8.380867 AGTATTACTGCAGGGTTACTTTAGTTT 58.619 33.333 19.93 0.00 0.00 2.66
113 114 7.822822 CAGTATTACTGCAGGGTTACTTTAGTT 59.177 37.037 19.93 0.00 39.62 2.24
114 115 7.179694 TCAGTATTACTGCAGGGTTACTTTAGT 59.820 37.037 19.93 0.00 45.54 2.24
115 116 7.553334 TCAGTATTACTGCAGGGTTACTTTAG 58.447 38.462 19.93 9.43 45.54 1.85
116 117 7.484993 TCAGTATTACTGCAGGGTTACTTTA 57.515 36.000 19.93 8.74 45.54 1.85
117 118 6.368779 TCAGTATTACTGCAGGGTTACTTT 57.631 37.500 19.93 0.00 45.54 2.66
118 119 6.212791 TCTTCAGTATTACTGCAGGGTTACTT 59.787 38.462 19.93 0.00 45.54 2.24
119 120 5.720041 TCTTCAGTATTACTGCAGGGTTACT 59.280 40.000 19.93 16.95 45.54 2.24
120 121 5.974108 TCTTCAGTATTACTGCAGGGTTAC 58.026 41.667 19.93 15.06 45.54 2.50
121 122 6.408092 CCATCTTCAGTATTACTGCAGGGTTA 60.408 42.308 19.93 3.12 45.54 2.85
122 123 5.431765 CATCTTCAGTATTACTGCAGGGTT 58.568 41.667 19.93 4.18 45.54 4.11
123 124 4.141620 CCATCTTCAGTATTACTGCAGGGT 60.142 45.833 19.93 5.82 45.54 4.34
124 125 4.384056 CCATCTTCAGTATTACTGCAGGG 58.616 47.826 19.93 11.92 45.54 4.45
125 126 3.812053 GCCATCTTCAGTATTACTGCAGG 59.188 47.826 19.93 15.11 45.54 4.85
126 127 3.492383 CGCCATCTTCAGTATTACTGCAG 59.508 47.826 13.48 13.48 45.54 4.41
127 128 3.132111 TCGCCATCTTCAGTATTACTGCA 59.868 43.478 17.35 7.40 45.54 4.41
128 129 3.717707 TCGCCATCTTCAGTATTACTGC 58.282 45.455 17.35 4.79 45.54 4.40
130 131 4.039730 AGCATCGCCATCTTCAGTATTACT 59.960 41.667 0.00 0.00 0.00 2.24
131 132 4.151335 CAGCATCGCCATCTTCAGTATTAC 59.849 45.833 0.00 0.00 0.00 1.89
132 133 4.202253 ACAGCATCGCCATCTTCAGTATTA 60.202 41.667 0.00 0.00 0.00 0.98
133 134 3.136763 CAGCATCGCCATCTTCAGTATT 58.863 45.455 0.00 0.00 0.00 1.89
134 135 2.103771 ACAGCATCGCCATCTTCAGTAT 59.896 45.455 0.00 0.00 0.00 2.12
135 136 1.482182 ACAGCATCGCCATCTTCAGTA 59.518 47.619 0.00 0.00 0.00 2.74
136 137 0.251354 ACAGCATCGCCATCTTCAGT 59.749 50.000 0.00 0.00 0.00 3.41
137 138 2.133553 CTACAGCATCGCCATCTTCAG 58.866 52.381 0.00 0.00 0.00 3.02
138 139 1.807755 GCTACAGCATCGCCATCTTCA 60.808 52.381 0.00 0.00 41.59 3.02
139 140 0.864455 GCTACAGCATCGCCATCTTC 59.136 55.000 0.00 0.00 41.59 2.87
140 141 0.467384 AGCTACAGCATCGCCATCTT 59.533 50.000 3.70 0.00 45.16 2.40
141 142 0.033228 GAGCTACAGCATCGCCATCT 59.967 55.000 3.70 0.00 45.16 2.90
142 143 0.249615 TGAGCTACAGCATCGCCATC 60.250 55.000 3.70 0.00 45.16 3.51
143 144 0.395686 ATGAGCTACAGCATCGCCAT 59.604 50.000 3.70 0.00 45.16 4.40
144 145 1.000171 CTATGAGCTACAGCATCGCCA 60.000 52.381 3.70 0.00 45.16 5.69
145 146 1.270826 TCTATGAGCTACAGCATCGCC 59.729 52.381 3.70 0.00 45.16 5.54
146 147 2.713895 TCTATGAGCTACAGCATCGC 57.286 50.000 3.70 0.00 45.16 4.58
147 148 4.431661 TGATCTATGAGCTACAGCATCG 57.568 45.455 3.70 0.00 45.16 3.84
148 149 5.782047 AGTTGATCTATGAGCTACAGCATC 58.218 41.667 3.70 0.00 45.16 3.91
149 150 5.564455 CGAGTTGATCTATGAGCTACAGCAT 60.564 44.000 3.70 0.00 45.16 3.79
150 151 4.261363 CGAGTTGATCTATGAGCTACAGCA 60.261 45.833 3.70 0.00 45.16 4.41
151 152 4.225984 CGAGTTGATCTATGAGCTACAGC 58.774 47.826 0.00 0.00 42.49 4.40
152 153 4.023279 AGCGAGTTGATCTATGAGCTACAG 60.023 45.833 0.00 0.00 31.38 2.74
153 154 3.885901 AGCGAGTTGATCTATGAGCTACA 59.114 43.478 0.00 0.00 31.38 2.74
154 155 4.225984 CAGCGAGTTGATCTATGAGCTAC 58.774 47.826 0.00 0.00 31.98 3.58
155 156 3.304996 GCAGCGAGTTGATCTATGAGCTA 60.305 47.826 0.00 0.00 31.98 3.32
156 157 2.545532 GCAGCGAGTTGATCTATGAGCT 60.546 50.000 0.00 0.00 0.00 4.09
157 158 1.791785 GCAGCGAGTTGATCTATGAGC 59.208 52.381 0.00 0.00 0.00 4.26
158 159 2.402305 GGCAGCGAGTTGATCTATGAG 58.598 52.381 0.00 0.00 0.00 2.90
159 160 1.269257 CGGCAGCGAGTTGATCTATGA 60.269 52.381 0.00 0.00 0.00 2.15
160 161 1.135046 CGGCAGCGAGTTGATCTATG 58.865 55.000 0.00 0.00 0.00 2.23
161 162 1.000827 CTCGGCAGCGAGTTGATCTAT 60.001 52.381 4.42 0.00 0.00 1.98
162 163 0.382158 CTCGGCAGCGAGTTGATCTA 59.618 55.000 4.42 0.00 0.00 1.98
163 164 1.140589 CTCGGCAGCGAGTTGATCT 59.859 57.895 4.42 0.00 0.00 2.75
164 165 1.153745 ACTCGGCAGCGAGTTGATC 60.154 57.895 11.61 0.00 45.69 2.92
165 166 2.973899 ACTCGGCAGCGAGTTGAT 59.026 55.556 11.61 0.00 45.69 2.57
170 171 4.838486 GGACGACTCGGCAGCGAG 62.838 72.222 6.62 10.36 36.10 5.03
174 175 4.778415 CCACGGACGACTCGGCAG 62.778 72.222 6.62 4.53 36.10 4.85
187 188 4.698651 ATTTGCGTTGCGGCCACG 62.699 61.111 20.68 20.68 44.63 4.94
188 189 2.804931 GATTTGCGTTGCGGCCAC 60.805 61.111 2.24 0.00 0.00 5.01
189 190 2.540736 GATGATTTGCGTTGCGGCCA 62.541 55.000 2.24 0.00 0.00 5.36
190 191 1.873572 GATGATTTGCGTTGCGGCC 60.874 57.895 0.00 0.00 0.00 6.13
191 192 1.154054 TGATGATTTGCGTTGCGGC 60.154 52.632 0.00 0.00 0.00 6.53
192 193 0.798009 GGTGATGATTTGCGTTGCGG 60.798 55.000 0.00 0.00 0.00 5.69
193 194 0.109827 TGGTGATGATTTGCGTTGCG 60.110 50.000 0.00 0.00 0.00 4.85
194 195 1.921887 CATGGTGATGATTTGCGTTGC 59.078 47.619 0.00 0.00 0.00 4.17
195 196 3.220507 ACATGGTGATGATTTGCGTTG 57.779 42.857 0.00 0.00 33.36 4.10
196 197 3.005684 ACAACATGGTGATGATTTGCGTT 59.994 39.130 19.90 0.00 33.36 4.84
197 198 2.557924 ACAACATGGTGATGATTTGCGT 59.442 40.909 19.90 0.00 33.36 5.24
198 199 3.220507 ACAACATGGTGATGATTTGCG 57.779 42.857 19.90 0.00 33.36 4.85
199 200 3.123959 GCAACAACATGGTGATGATTTGC 59.876 43.478 23.74 20.12 37.20 3.68
200 201 3.680937 GGCAACAACATGGTGATGATTTG 59.319 43.478 23.74 14.74 37.20 2.32
201 202 3.929094 GGCAACAACATGGTGATGATTT 58.071 40.909 23.74 1.23 37.20 2.17
202 203 3.598019 GGCAACAACATGGTGATGATT 57.402 42.857 23.74 1.64 37.20 2.57
217 218 2.680312 TGCTGAGAGATAGTGGCAAC 57.320 50.000 0.00 0.00 0.00 4.17
218 219 3.036819 AGATGCTGAGAGATAGTGGCAA 58.963 45.455 0.00 0.00 33.44 4.52
219 220 2.675583 AGATGCTGAGAGATAGTGGCA 58.324 47.619 0.00 0.00 0.00 4.92
220 221 3.652274 GAAGATGCTGAGAGATAGTGGC 58.348 50.000 0.00 0.00 0.00 5.01
221 222 3.317711 ACGAAGATGCTGAGAGATAGTGG 59.682 47.826 0.00 0.00 0.00 4.00
222 223 4.566545 ACGAAGATGCTGAGAGATAGTG 57.433 45.455 0.00 0.00 0.00 2.74
223 224 4.517453 GGTACGAAGATGCTGAGAGATAGT 59.483 45.833 0.00 0.00 0.00 2.12
224 225 4.083003 GGGTACGAAGATGCTGAGAGATAG 60.083 50.000 0.00 0.00 0.00 2.08
225 226 3.821600 GGGTACGAAGATGCTGAGAGATA 59.178 47.826 0.00 0.00 0.00 1.98
226 227 2.625790 GGGTACGAAGATGCTGAGAGAT 59.374 50.000 0.00 0.00 0.00 2.75
227 228 2.025155 GGGTACGAAGATGCTGAGAGA 58.975 52.381 0.00 0.00 0.00 3.10
228 229 1.067821 GGGGTACGAAGATGCTGAGAG 59.932 57.143 0.00 0.00 0.00 3.20
229 230 1.112113 GGGGTACGAAGATGCTGAGA 58.888 55.000 0.00 0.00 0.00 3.27
230 231 3.669354 GGGGTACGAAGATGCTGAG 57.331 57.895 0.00 0.00 0.00 3.35
242 243 4.603946 GGCGATGGAGCGGGGTAC 62.604 72.222 0.00 0.00 38.18 3.34
243 244 4.853142 AGGCGATGGAGCGGGGTA 62.853 66.667 0.00 0.00 38.18 3.69
246 247 4.899239 GTGAGGCGATGGAGCGGG 62.899 72.222 0.00 0.00 38.18 6.13
248 249 4.193334 TCGTGAGGCGATGGAGCG 62.193 66.667 0.00 0.00 45.68 5.03
256 257 4.899239 GGGGCAGATCGTGAGGCG 62.899 72.222 0.00 0.00 43.01 5.52
257 258 2.543067 AAAGGGGCAGATCGTGAGGC 62.543 60.000 0.00 0.00 0.00 4.70
258 259 0.462759 GAAAGGGGCAGATCGTGAGG 60.463 60.000 0.00 0.00 0.00 3.86
259 260 0.250234 TGAAAGGGGCAGATCGTGAG 59.750 55.000 0.00 0.00 0.00 3.51
260 261 0.911769 ATGAAAGGGGCAGATCGTGA 59.088 50.000 0.00 0.00 0.00 4.35
261 262 1.019673 CATGAAAGGGGCAGATCGTG 58.980 55.000 0.00 0.00 0.00 4.35
262 263 0.911769 TCATGAAAGGGGCAGATCGT 59.088 50.000 0.00 0.00 0.00 3.73
263 264 1.139654 TCTCATGAAAGGGGCAGATCG 59.860 52.381 0.00 0.00 0.00 3.69
264 265 2.172293 AGTCTCATGAAAGGGGCAGATC 59.828 50.000 0.00 0.00 0.00 2.75
265 266 2.203584 AGTCTCATGAAAGGGGCAGAT 58.796 47.619 0.00 0.00 0.00 2.90
266 267 1.661463 AGTCTCATGAAAGGGGCAGA 58.339 50.000 0.00 0.00 0.00 4.26
267 268 3.853355 ATAGTCTCATGAAAGGGGCAG 57.147 47.619 0.00 0.00 0.00 4.85
268 269 4.591321 AAATAGTCTCATGAAAGGGGCA 57.409 40.909 0.00 0.00 0.00 5.36
269 270 5.921962 AAAAATAGTCTCATGAAAGGGGC 57.078 39.130 0.00 0.00 0.00 5.80
288 289 3.895041 GGGATGACCTCCTTTGTCAAAAA 59.105 43.478 0.00 0.00 45.15 1.94
289 290 3.496331 GGGATGACCTCCTTTGTCAAAA 58.504 45.455 0.00 0.00 45.15 2.44
290 291 2.225017 GGGGATGACCTCCTTTGTCAAA 60.225 50.000 0.00 0.00 45.15 2.69
291 292 1.354368 GGGGATGACCTCCTTTGTCAA 59.646 52.381 0.00 0.00 45.15 3.18
292 293 0.991920 GGGGATGACCTCCTTTGTCA 59.008 55.000 0.00 0.00 45.98 3.58
293 294 3.884226 GGGGATGACCTCCTTTGTC 57.116 57.895 0.00 0.00 44.28 3.18
303 304 3.866582 CAGAGGCCGGGGGATGAC 61.867 72.222 2.18 0.00 0.00 3.06
309 310 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
310 311 2.541547 TTTCTGATGCAGAGGCCGGG 62.542 60.000 2.18 0.00 41.75 5.73
311 312 1.078214 TTTCTGATGCAGAGGCCGG 60.078 57.895 0.00 0.00 41.75 6.13
312 313 0.107993 TCTTTCTGATGCAGAGGCCG 60.108 55.000 0.00 0.00 41.75 6.13
313 314 1.948145 CATCTTTCTGATGCAGAGGCC 59.052 52.381 0.00 0.00 44.96 5.19
322 323 1.945394 GGTCGCATGCATCTTTCTGAT 59.055 47.619 19.57 0.00 35.40 2.90
323 324 1.338960 TGGTCGCATGCATCTTTCTGA 60.339 47.619 19.57 0.55 0.00 3.27
324 325 1.089112 TGGTCGCATGCATCTTTCTG 58.911 50.000 19.57 0.00 0.00 3.02
325 326 1.089920 GTGGTCGCATGCATCTTTCT 58.910 50.000 19.57 0.00 0.00 2.52
326 327 1.089920 AGTGGTCGCATGCATCTTTC 58.910 50.000 19.57 3.18 0.00 2.62
327 328 1.538047 AAGTGGTCGCATGCATCTTT 58.462 45.000 19.57 0.94 0.00 2.52
328 329 1.538047 AAAGTGGTCGCATGCATCTT 58.462 45.000 19.57 10.65 0.00 2.40
329 330 2.401583 TAAAGTGGTCGCATGCATCT 57.598 45.000 19.57 4.97 0.00 2.90
330 331 3.698029 AATAAAGTGGTCGCATGCATC 57.302 42.857 19.57 9.50 0.00 3.91
331 332 5.574891 TTTAATAAAGTGGTCGCATGCAT 57.425 34.783 19.57 0.00 0.00 3.96
332 333 5.378292 TTTTAATAAAGTGGTCGCATGCA 57.622 34.783 19.57 1.73 0.00 3.96
333 334 5.220209 GCTTTTTAATAAAGTGGTCGCATGC 60.220 40.000 7.91 7.91 0.00 4.06
334 335 5.288472 GGCTTTTTAATAAAGTGGTCGCATG 59.712 40.000 10.04 0.00 0.00 4.06
335 336 5.407502 GGCTTTTTAATAAAGTGGTCGCAT 58.592 37.500 10.04 0.00 0.00 4.73
336 337 4.614078 CGGCTTTTTAATAAAGTGGTCGCA 60.614 41.667 10.04 0.00 0.00 5.10
337 338 3.849708 CGGCTTTTTAATAAAGTGGTCGC 59.150 43.478 10.04 0.00 0.00 5.19
338 339 5.084055 GTCGGCTTTTTAATAAAGTGGTCG 58.916 41.667 10.04 3.66 0.00 4.79
339 340 6.004408 TGTCGGCTTTTTAATAAAGTGGTC 57.996 37.500 0.00 4.21 0.00 4.02
340 341 5.533528 ACTGTCGGCTTTTTAATAAAGTGGT 59.466 36.000 0.00 0.00 0.00 4.16
341 342 6.009115 ACTGTCGGCTTTTTAATAAAGTGG 57.991 37.500 0.00 5.10 0.00 4.00
342 343 8.071368 TGTTACTGTCGGCTTTTTAATAAAGTG 58.929 33.333 0.00 5.69 0.00 3.16
343 344 8.156994 TGTTACTGTCGGCTTTTTAATAAAGT 57.843 30.769 0.00 0.00 0.00 2.66
344 345 9.453325 TTTGTTACTGTCGGCTTTTTAATAAAG 57.547 29.630 0.00 0.00 0.00 1.85
345 346 9.453325 CTTTGTTACTGTCGGCTTTTTAATAAA 57.547 29.630 0.00 0.00 0.00 1.40
346 347 8.623030 ACTTTGTTACTGTCGGCTTTTTAATAA 58.377 29.630 0.00 0.00 0.00 1.40
347 348 8.156994 ACTTTGTTACTGTCGGCTTTTTAATA 57.843 30.769 0.00 0.00 0.00 0.98
348 349 7.012989 AGACTTTGTTACTGTCGGCTTTTTAAT 59.987 33.333 0.00 0.00 36.01 1.40
349 350 6.316890 AGACTTTGTTACTGTCGGCTTTTTAA 59.683 34.615 0.00 0.00 36.01 1.52
350 351 5.818857 AGACTTTGTTACTGTCGGCTTTTTA 59.181 36.000 0.00 0.00 36.01 1.52
351 352 4.638865 AGACTTTGTTACTGTCGGCTTTTT 59.361 37.500 0.00 0.00 36.01 1.94
352 353 4.035208 CAGACTTTGTTACTGTCGGCTTTT 59.965 41.667 0.00 0.00 36.01 2.27
353 354 3.560068 CAGACTTTGTTACTGTCGGCTTT 59.440 43.478 0.00 0.00 36.01 3.51
354 355 3.131396 CAGACTTTGTTACTGTCGGCTT 58.869 45.455 0.00 0.00 36.01 4.35
355 356 2.364324 TCAGACTTTGTTACTGTCGGCT 59.636 45.455 0.00 0.00 36.01 5.52
356 357 2.750948 TCAGACTTTGTTACTGTCGGC 58.249 47.619 0.00 0.00 36.01 5.54
357 358 4.623167 CAGATCAGACTTTGTTACTGTCGG 59.377 45.833 0.00 0.00 36.01 4.79
358 359 4.090642 GCAGATCAGACTTTGTTACTGTCG 59.909 45.833 0.00 0.00 36.01 4.35
359 360 4.991056 TGCAGATCAGACTTTGTTACTGTC 59.009 41.667 0.00 0.00 33.93 3.51
360 361 4.960938 TGCAGATCAGACTTTGTTACTGT 58.039 39.130 0.00 0.00 33.93 3.55
361 362 5.929697 TTGCAGATCAGACTTTGTTACTG 57.070 39.130 0.00 0.00 0.00 2.74
362 363 6.058183 ACTTTGCAGATCAGACTTTGTTACT 58.942 36.000 0.00 0.00 0.00 2.24
363 364 6.305693 ACTTTGCAGATCAGACTTTGTTAC 57.694 37.500 0.00 0.00 0.00 2.50
364 365 7.171508 CAGTACTTTGCAGATCAGACTTTGTTA 59.828 37.037 0.00 0.00 0.00 2.41
365 366 6.017605 CAGTACTTTGCAGATCAGACTTTGTT 60.018 38.462 0.00 0.00 0.00 2.83
366 367 5.468072 CAGTACTTTGCAGATCAGACTTTGT 59.532 40.000 0.00 0.00 0.00 2.83
367 368 5.616424 GCAGTACTTTGCAGATCAGACTTTG 60.616 44.000 0.00 0.00 43.53 2.77
368 369 4.453819 GCAGTACTTTGCAGATCAGACTTT 59.546 41.667 0.00 0.00 43.53 2.66
369 370 3.999663 GCAGTACTTTGCAGATCAGACTT 59.000 43.478 0.00 0.00 43.53 3.01
370 371 3.260380 AGCAGTACTTTGCAGATCAGACT 59.740 43.478 9.50 0.00 46.47 3.24
371 372 3.594134 AGCAGTACTTTGCAGATCAGAC 58.406 45.455 9.50 0.00 46.47 3.51
372 373 3.259123 TGAGCAGTACTTTGCAGATCAGA 59.741 43.478 9.50 0.00 46.47 3.27
373 374 3.370366 GTGAGCAGTACTTTGCAGATCAG 59.630 47.826 9.50 0.00 46.47 2.90
374 375 3.244181 TGTGAGCAGTACTTTGCAGATCA 60.244 43.478 9.50 2.32 46.47 2.92
375 376 3.329386 TGTGAGCAGTACTTTGCAGATC 58.671 45.455 9.50 0.00 46.47 2.75
376 377 3.407424 TGTGAGCAGTACTTTGCAGAT 57.593 42.857 9.50 0.00 46.47 2.90
377 378 2.908688 TGTGAGCAGTACTTTGCAGA 57.091 45.000 9.50 0.00 46.47 4.26
378 379 3.969117 TTTGTGAGCAGTACTTTGCAG 57.031 42.857 9.50 0.00 46.47 4.41
379 380 3.066621 CCTTTTGTGAGCAGTACTTTGCA 59.933 43.478 9.50 0.00 46.47 4.08
380 381 3.315191 TCCTTTTGTGAGCAGTACTTTGC 59.685 43.478 0.00 0.00 44.41 3.68
381 382 5.100751 CTCCTTTTGTGAGCAGTACTTTG 57.899 43.478 0.00 0.00 0.00 2.77
391 392 3.441496 TTGCTTTGCTCCTTTTGTGAG 57.559 42.857 0.00 0.00 0.00 3.51
392 393 3.883830 TTTGCTTTGCTCCTTTTGTGA 57.116 38.095 0.00 0.00 0.00 3.58
393 394 6.790285 ATATTTTGCTTTGCTCCTTTTGTG 57.210 33.333 0.00 0.00 0.00 3.33
394 395 8.900983 TTTATATTTTGCTTTGCTCCTTTTGT 57.099 26.923 0.00 0.00 0.00 2.83
395 396 9.206870 TCTTTATATTTTGCTTTGCTCCTTTTG 57.793 29.630 0.00 0.00 0.00 2.44
396 397 9.428097 CTCTTTATATTTTGCTTTGCTCCTTTT 57.572 29.630 0.00 0.00 0.00 2.27
397 398 8.588472 ACTCTTTATATTTTGCTTTGCTCCTTT 58.412 29.630 0.00 0.00 0.00 3.11
398 399 8.127150 ACTCTTTATATTTTGCTTTGCTCCTT 57.873 30.769 0.00 0.00 0.00 3.36
399 400 7.709149 ACTCTTTATATTTTGCTTTGCTCCT 57.291 32.000 0.00 0.00 0.00 3.69
400 401 8.458843 TGTACTCTTTATATTTTGCTTTGCTCC 58.541 33.333 0.00 0.00 0.00 4.70
401 402 9.840427 TTGTACTCTTTATATTTTGCTTTGCTC 57.160 29.630 0.00 0.00 0.00 4.26
414 415 7.966204 GCGGCTTTGAAATTTGTACTCTTTATA 59.034 33.333 0.00 0.00 0.00 0.98
415 416 6.806739 GCGGCTTTGAAATTTGTACTCTTTAT 59.193 34.615 0.00 0.00 0.00 1.40
416 417 6.146898 GCGGCTTTGAAATTTGTACTCTTTA 58.853 36.000 0.00 0.00 0.00 1.85
417 418 4.982295 GCGGCTTTGAAATTTGTACTCTTT 59.018 37.500 0.00 0.00 0.00 2.52
418 419 4.037446 TGCGGCTTTGAAATTTGTACTCTT 59.963 37.500 0.00 0.00 0.00 2.85
419 420 3.568007 TGCGGCTTTGAAATTTGTACTCT 59.432 39.130 0.00 0.00 0.00 3.24
420 421 3.896122 TGCGGCTTTGAAATTTGTACTC 58.104 40.909 0.00 0.00 0.00 2.59
421 422 4.519540 ATGCGGCTTTGAAATTTGTACT 57.480 36.364 0.00 0.00 0.00 2.73
422 423 5.231991 CCATATGCGGCTTTGAAATTTGTAC 59.768 40.000 0.00 0.00 0.00 2.90
423 424 5.347342 CCATATGCGGCTTTGAAATTTGTA 58.653 37.500 0.00 0.00 0.00 2.41
424 425 4.183101 CCATATGCGGCTTTGAAATTTGT 58.817 39.130 0.00 0.00 0.00 2.83
425 426 4.782252 CCATATGCGGCTTTGAAATTTG 57.218 40.909 0.00 0.00 0.00 2.32
439 440 0.322975 ATCCTCGTCCAGCCATATGC 59.677 55.000 0.00 0.00 41.71 3.14
440 441 2.562738 TGTATCCTCGTCCAGCCATATG 59.437 50.000 0.00 0.00 0.00 1.78
441 442 2.563179 GTGTATCCTCGTCCAGCCATAT 59.437 50.000 0.00 0.00 0.00 1.78
442 443 1.961394 GTGTATCCTCGTCCAGCCATA 59.039 52.381 0.00 0.00 0.00 2.74
443 444 0.753262 GTGTATCCTCGTCCAGCCAT 59.247 55.000 0.00 0.00 0.00 4.40
444 445 0.324368 AGTGTATCCTCGTCCAGCCA 60.324 55.000 0.00 0.00 0.00 4.75
445 446 1.688772 TAGTGTATCCTCGTCCAGCC 58.311 55.000 0.00 0.00 0.00 4.85
446 447 2.034812 CCTTAGTGTATCCTCGTCCAGC 59.965 54.545 0.00 0.00 0.00 4.85
447 448 3.315749 GTCCTTAGTGTATCCTCGTCCAG 59.684 52.174 0.00 0.00 0.00 3.86
448 449 3.285484 GTCCTTAGTGTATCCTCGTCCA 58.715 50.000 0.00 0.00 0.00 4.02
449 450 2.622470 GGTCCTTAGTGTATCCTCGTCC 59.378 54.545 0.00 0.00 0.00 4.79
450 451 3.553904 AGGTCCTTAGTGTATCCTCGTC 58.446 50.000 0.00 0.00 0.00 4.20
451 452 3.666345 AGGTCCTTAGTGTATCCTCGT 57.334 47.619 0.00 0.00 0.00 4.18
452 453 4.701171 GGATAGGTCCTTAGTGTATCCTCG 59.299 50.000 0.00 0.00 41.60 4.63
465 466 8.960194 GGAGATCACTGCATAGGATAGGTCCT 62.960 50.000 0.00 0.00 44.24 3.85
466 467 4.093011 AGATCACTGCATAGGATAGGTCC 58.907 47.826 0.00 0.00 45.45 4.46
467 468 4.159506 GGAGATCACTGCATAGGATAGGTC 59.840 50.000 0.00 0.00 34.59 3.85
468 469 4.093011 GGAGATCACTGCATAGGATAGGT 58.907 47.826 0.00 0.00 34.59 3.08
469 470 4.092279 TGGAGATCACTGCATAGGATAGG 58.908 47.826 0.00 0.00 39.43 2.57
479 480 2.019984 GGTTTGGATGGAGATCACTGC 58.980 52.381 0.00 0.00 35.03 4.40
480 481 2.283298 CGGTTTGGATGGAGATCACTG 58.717 52.381 0.00 0.00 0.00 3.66
481 482 1.210478 CCGGTTTGGATGGAGATCACT 59.790 52.381 0.00 0.00 42.00 3.41
482 483 1.065418 ACCGGTTTGGATGGAGATCAC 60.065 52.381 0.00 0.00 42.00 3.06
483 484 1.285280 ACCGGTTTGGATGGAGATCA 58.715 50.000 0.00 0.00 42.00 2.92
484 485 2.017049 CAACCGGTTTGGATGGAGATC 58.983 52.381 19.55 0.00 42.00 2.75
485 486 1.633432 TCAACCGGTTTGGATGGAGAT 59.367 47.619 19.55 0.00 40.78 2.75
486 487 1.060729 TCAACCGGTTTGGATGGAGA 58.939 50.000 19.55 6.35 40.78 3.71
487 488 1.904287 TTCAACCGGTTTGGATGGAG 58.096 50.000 19.55 3.62 40.78 3.86
488 489 2.366640 TTTCAACCGGTTTGGATGGA 57.633 45.000 19.55 8.00 40.78 3.41
489 490 3.460857 TTTTTCAACCGGTTTGGATGG 57.539 42.857 19.55 5.30 40.78 3.51
507 508 2.347630 GCCTGTAAGCCCGGTTTTT 58.652 52.632 0.00 0.00 0.00 1.94
508 509 4.090723 GCCTGTAAGCCCGGTTTT 57.909 55.556 0.00 0.00 0.00 2.43
516 517 3.732849 AGGGGCTGGCCTGTAAGC 61.733 66.667 20.47 7.91 38.76 3.09
517 518 2.273449 CAGGGGCTGGCCTGTAAG 59.727 66.667 20.47 0.00 36.10 2.34
518 519 2.531685 ACAGGGGCTGGCCTGTAA 60.532 61.111 20.47 0.00 44.22 2.41
519 520 3.329889 CACAGGGGCTGGCCTGTA 61.330 66.667 20.47 0.00 44.23 2.74
613 615 3.402110 CCATGTCGCATTGGAGCTATTA 58.598 45.455 0.00 0.00 34.81 0.98
749 751 4.591321 ATGTGGATAAGTTGTGGGTCAT 57.409 40.909 0.00 0.00 0.00 3.06
750 752 5.249622 TCTTATGTGGATAAGTTGTGGGTCA 59.750 40.000 0.00 0.00 41.33 4.02
781 783 1.129917 CTCATGGATGGCTCAGGTCT 58.870 55.000 0.00 0.00 0.00 3.85
786 788 0.984432 TCAGGCTCATGGATGGCTCA 60.984 55.000 7.22 0.00 36.95 4.26
797 799 4.980592 TGGGGTGGCTCAGGCTCA 62.981 66.667 0.00 0.00 38.73 4.26
831 835 0.329138 GGGGAAAGGGGATAGGGGAA 60.329 60.000 0.00 0.00 0.00 3.97
855 859 3.328931 TGCCAGAGAAGAGGAAGAACAAT 59.671 43.478 0.00 0.00 0.00 2.71
910 960 4.379918 CGAAGTTGAGCTAGACATCACTCA 60.380 45.833 0.00 0.00 37.38 3.41
971 1021 0.327924 ATCGGGGCATCTTGTCAACA 59.672 50.000 0.00 0.00 0.00 3.33
1033 1083 0.678950 CCACGGTTGCCATTTTCCTT 59.321 50.000 0.00 0.00 0.00 3.36
1070 1120 0.106769 TGGTTGTGGCTTGCTCAAGA 60.107 50.000 13.33 0.00 40.79 3.02
1135 1482 6.146347 CGCCCAAATTCGAAGGAAAAATAAAA 59.854 34.615 3.35 0.00 35.40 1.52
1147 1494 0.322997 ATCCACCGCCCAAATTCGAA 60.323 50.000 0.00 0.00 0.00 3.71
1183 1530 1.696097 AAACTGGGGTCGACAGCAGT 61.696 55.000 18.91 0.00 39.55 4.40
1185 1532 0.034337 GTAAACTGGGGTCGACAGCA 59.966 55.000 18.91 0.00 39.55 4.41
1198 1545 6.661805 TCAGAACCTGAAAAACAAGGTAAACT 59.338 34.615 0.00 0.00 37.57 2.66
1228 1575 1.202758 AGCCACTCGAAATGTCCACAA 60.203 47.619 0.00 0.00 0.00 3.33
1327 1680 0.865111 TCAAATGTGAGGCGTGTTCG 59.135 50.000 0.00 0.00 40.37 3.95
1346 1699 1.752358 ATCGCATCGGCTCTGTCCAT 61.752 55.000 0.00 0.00 38.10 3.41
1361 1714 0.460811 TCAGCACTGTCCATCATCGC 60.461 55.000 0.00 0.00 0.00 4.58
1404 1757 0.109597 CTGCTTTAGTTGCTTGCCCG 60.110 55.000 0.00 0.00 0.00 6.13
1567 1922 6.183361 ACAATAACTGAAACTAAGGACCCCTT 60.183 38.462 3.54 3.54 46.63 3.95
1576 1931 9.856488 CTAGCTAGACACAATAACTGAAACTAA 57.144 33.333 16.15 0.00 0.00 2.24
1609 1964 8.989131 AGCTAACAAATGATCCCTAACTTACTA 58.011 33.333 0.00 0.00 0.00 1.82
1648 2003 3.830755 AGAATTCAGGCTTTGCTTCACAT 59.169 39.130 8.44 0.00 0.00 3.21
1724 2080 4.713553 TCAGTTACAAGAACTTGGCATGA 58.286 39.130 17.05 12.30 44.45 3.07
1750 2106 5.426689 TGAACACTGGATATCTCTGCTTT 57.573 39.130 2.05 0.00 0.00 3.51
1795 2151 3.478540 GGGGGTGTGCACTCTATTC 57.521 57.895 19.41 1.36 30.95 1.75
1854 2211 3.084786 GCCTGGTTATTTTCTCACAGCT 58.915 45.455 0.00 0.00 0.00 4.24
1857 2214 2.109128 TGGGCCTGGTTATTTTCTCACA 59.891 45.455 4.53 0.00 0.00 3.58
1900 2257 0.916358 AACTGGGCTGGTGCTCCTAT 60.916 55.000 6.34 0.00 39.40 2.57
1905 2262 2.945890 GCTATAAAACTGGGCTGGTGCT 60.946 50.000 0.00 0.00 39.59 4.40
2062 2424 4.699925 AGTACAATACATACGGCCCAAT 57.300 40.909 0.00 0.00 0.00 3.16
2319 2683 7.678837 ACTGAAATGCCCAAAAGAAATATTGA 58.321 30.769 0.00 0.00 0.00 2.57
2320 2684 7.910441 ACTGAAATGCCCAAAAGAAATATTG 57.090 32.000 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.