Multiple sequence alignment - TraesCS7A01G472600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G472600 chr7A 100.000 2222 0 0 1 2222 668556296 668554075 0.000000e+00 4104
1 TraesCS7A01G472600 chr7A 95.006 1542 75 2 1 1540 71221110 71222651 0.000000e+00 2420
2 TraesCS7A01G472600 chr7A 94.863 1538 77 2 1 1537 17368998 17370534 0.000000e+00 2401
3 TraesCS7A01G472600 chr7A 90.722 388 26 6 1836 2222 191174705 191174327 1.970000e-140 508
4 TraesCS7A01G472600 chr7A 90.127 395 30 7 1829 2222 668869297 668869683 2.550000e-139 505
5 TraesCS7A01G472600 chr7A 96.954 197 6 0 1537 1733 668567321 668567125 4.570000e-87 331
6 TraesCS7A01G472600 chr3A 95.798 1547 62 2 1 1544 11599031 11597485 0.000000e+00 2494
7 TraesCS7A01G472600 chr3A 95.669 1547 64 2 1 1544 11605919 11604373 0.000000e+00 2483
8 TraesCS7A01G472600 chr3A 94.961 1548 73 3 1 1547 459623244 459621701 0.000000e+00 2422
9 TraesCS7A01G472600 chr3A 94.805 1540 77 2 1 1539 684743942 684745479 0.000000e+00 2398
10 TraesCS7A01G472600 chr3A 92.031 389 24 4 1835 2222 603916461 603916079 6.980000e-150 540
11 TraesCS7A01G472600 chr3A 90.840 393 28 5 1831 2222 27779403 27779018 9.090000e-144 520
12 TraesCS7A01G472600 chr4B 95.062 1539 72 2 1 1538 85985498 85987033 0.000000e+00 2418
13 TraesCS7A01G472600 chr4B 94.870 1540 76 2 1 1539 604142986 604144523 0.000000e+00 2403
14 TraesCS7A01G472600 chr5A 94.693 1545 81 1 1 1544 23905548 23904004 0.000000e+00 2398
15 TraesCS7A01G472600 chr5A 89.698 398 32 6 1826 2222 1303051 1303440 1.180000e-137 499
16 TraesCS7A01G472600 chr4A 91.990 387 24 4 1836 2221 387111864 387112244 9.030000e-149 536
17 TraesCS7A01G472600 chr5D 91.753 388 25 3 1836 2222 360981373 360981754 1.170000e-147 532
18 TraesCS7A01G472600 chr5D 90.909 165 11 3 1566 1727 312078168 312078331 3.710000e-53 219
19 TraesCS7A01G472600 chr2A 90.979 388 28 4 1836 2222 44025382 44025763 1.180000e-142 516
20 TraesCS7A01G472600 chr5B 90.722 388 25 6 1836 2222 615700787 615700410 7.080000e-140 507
21 TraesCS7A01G472600 chr2D 92.262 168 10 1 1537 1701 174334124 174334291 3.690000e-58 235
22 TraesCS7A01G472600 chr2D 90.854 164 12 1 1541 1701 174381868 174382031 1.340000e-52 217
23 TraesCS7A01G472600 chr6B 91.667 168 11 2 1537 1701 643422134 643421967 1.720000e-56 230
24 TraesCS7A01G472600 chr6B 90.476 168 13 2 1537 1701 643424976 643424809 3.710000e-53 219
25 TraesCS7A01G472600 chr1D 91.176 170 10 2 1537 1701 12256904 12256735 2.220000e-55 226
26 TraesCS7A01G472600 chr2B 91.803 122 10 0 1580 1701 8750819 8750698 1.060000e-38 171
27 TraesCS7A01G472600 chr2B 90.244 123 10 2 1580 1701 797176415 797176294 2.280000e-35 159
28 TraesCS7A01G472600 chr7B 93.617 94 4 2 1734 1826 639413881 639413789 2.980000e-29 139
29 TraesCS7A01G472600 chr7D 86.022 93 11 2 1735 1826 576675145 576675236 5.050000e-17 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G472600 chr7A 668554075 668556296 2221 True 4104.0 4104 100.0000 1 2222 1 chr7A.!!$R2 2221
1 TraesCS7A01G472600 chr7A 71221110 71222651 1541 False 2420.0 2420 95.0060 1 1540 1 chr7A.!!$F2 1539
2 TraesCS7A01G472600 chr7A 17368998 17370534 1536 False 2401.0 2401 94.8630 1 1537 1 chr7A.!!$F1 1536
3 TraesCS7A01G472600 chr3A 11597485 11599031 1546 True 2494.0 2494 95.7980 1 1544 1 chr3A.!!$R1 1543
4 TraesCS7A01G472600 chr3A 11604373 11605919 1546 True 2483.0 2483 95.6690 1 1544 1 chr3A.!!$R2 1543
5 TraesCS7A01G472600 chr3A 459621701 459623244 1543 True 2422.0 2422 94.9610 1 1547 1 chr3A.!!$R4 1546
6 TraesCS7A01G472600 chr3A 684743942 684745479 1537 False 2398.0 2398 94.8050 1 1539 1 chr3A.!!$F1 1538
7 TraesCS7A01G472600 chr4B 85985498 85987033 1535 False 2418.0 2418 95.0620 1 1538 1 chr4B.!!$F1 1537
8 TraesCS7A01G472600 chr4B 604142986 604144523 1537 False 2403.0 2403 94.8700 1 1539 1 chr4B.!!$F2 1538
9 TraesCS7A01G472600 chr5A 23904004 23905548 1544 True 2398.0 2398 94.6930 1 1544 1 chr5A.!!$R1 1543
10 TraesCS7A01G472600 chr6B 643421967 643424976 3009 True 224.5 230 91.0715 1537 1701 2 chr6B.!!$R1 164

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 554 1.148027 CCCTGGAGATAGTGCCTAGGA 59.852 57.143 14.75 0.0 0.0 2.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2058 4908 0.033306 AAGTACTCCCTCGGTCCCTC 60.033 60.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 5.389516 CGAAAGGTATTTGGTTTCTCTGTCG 60.390 44.000 0.00 0.00 0.00 4.35
330 331 3.871594 GCATACCTTTACAGAACAGCGAT 59.128 43.478 0.00 0.00 0.00 4.58
338 339 8.857098 ACCTTTACAGAACAGCGATAGATATTA 58.143 33.333 0.00 0.00 39.76 0.98
553 554 1.148027 CCCTGGAGATAGTGCCTAGGA 59.852 57.143 14.75 0.00 0.00 2.94
644 646 7.975616 GCACAAATAAGGCAATTCTAATCAAGA 59.024 33.333 0.00 0.00 0.00 3.02
647 649 7.830099 AATAAGGCAATTCTAATCAAGAGGG 57.170 36.000 0.00 0.00 35.05 4.30
694 696 5.592282 CCAGTTTAATGCATATGGTGGTACA 59.408 40.000 0.00 0.00 0.00 2.90
776 778 5.188555 TGCATCTTGACTTCTTCAGTATCCT 59.811 40.000 0.00 0.00 35.01 3.24
924 927 7.346751 TGAAGCCCCATGATTCTTATTTAAC 57.653 36.000 0.00 0.00 0.00 2.01
1032 1035 2.509916 GGAGAGCATGCCCTGGAG 59.490 66.667 15.66 0.00 0.00 3.86
1146 1149 3.394836 GCTCCTCACGCTTCCCCT 61.395 66.667 0.00 0.00 0.00 4.79
1202 1205 3.216800 TCGCGGTTAGCTTCCTAATAGA 58.783 45.455 6.13 0.00 45.59 1.98
1257 1262 9.484806 AGGATGGATTTGTCTGAGATTAATTTT 57.515 29.630 0.00 0.00 0.00 1.82
1293 1298 6.823689 GGATGCACTCTGATTTAGTTTCCTAA 59.176 38.462 0.00 0.00 0.00 2.69
1310 1315 5.617528 TCCTAAAATAGAATGCACCCGTA 57.382 39.130 0.00 0.00 0.00 4.02
1444 1449 8.570068 AAGGCTAACCGTTAGATTGATTTTAA 57.430 30.769 20.39 0.00 42.76 1.52
1461 1466 0.753867 TAATGGGCCTAATCGTGCGA 59.246 50.000 4.53 0.00 0.00 5.10
1486 1491 5.105269 TGGTATTGGATCTGTGTACGCTTTA 60.105 40.000 8.10 0.00 0.00 1.85
1491 1496 3.181469 GGATCTGTGTACGCTTTATGGGA 60.181 47.826 8.10 0.00 0.00 4.37
1505 1510 6.624861 CGCTTTATGGGATGTGCTTAAAGAAA 60.625 38.462 0.00 0.00 33.67 2.52
1557 1562 6.864151 AGATGCATAGCACATTCCTATCTA 57.136 37.500 0.00 0.00 43.04 1.98
1561 1566 7.724490 TGCATAGCACATTCCTATCTACTAT 57.276 36.000 0.00 0.00 31.71 2.12
1589 4439 1.758440 TTCCTGCCGTTCAGCTCAGT 61.758 55.000 0.00 0.00 41.50 3.41
1599 4449 4.084328 CCGTTCAGCTCAGTCTTTTTACTG 60.084 45.833 0.00 0.00 46.78 2.74
1607 4457 5.470437 GCTCAGTCTTTTTACTGGCTAAAGT 59.530 40.000 4.32 0.00 45.69 2.66
1636 4486 1.777272 ACTTCTCCACCTCAGCCTTTT 59.223 47.619 0.00 0.00 0.00 2.27
1639 4489 4.043435 ACTTCTCCACCTCAGCCTTTTTAT 59.957 41.667 0.00 0.00 0.00 1.40
1641 4491 4.998051 TCTCCACCTCAGCCTTTTTATTT 58.002 39.130 0.00 0.00 0.00 1.40
1652 4502 6.435904 TCAGCCTTTTTATTTGCTAAAGCCTA 59.564 34.615 0.00 0.00 41.18 3.93
1666 4516 6.156256 TGCTAAAGCCTAATACTCTTTCTCCA 59.844 38.462 0.00 0.00 41.18 3.86
1685 4535 1.374947 CCTCAGCCTTTTGGACCGA 59.625 57.895 0.00 0.00 44.07 4.69
1692 4542 1.335964 GCCTTTTGGACCGAAGAAAGC 60.336 52.381 8.57 1.40 44.07 3.51
1701 4551 3.385577 GACCGAAGAAAGCCTAGCATAG 58.614 50.000 0.00 0.00 38.80 2.23
1702 4552 2.766828 ACCGAAGAAAGCCTAGCATAGT 59.233 45.455 0.00 0.00 36.82 2.12
1703 4553 3.958798 ACCGAAGAAAGCCTAGCATAGTA 59.041 43.478 0.00 0.00 36.82 1.82
1704 4554 4.589374 ACCGAAGAAAGCCTAGCATAGTAT 59.411 41.667 0.00 0.00 36.82 2.12
1705 4555 5.070580 ACCGAAGAAAGCCTAGCATAGTATT 59.929 40.000 0.00 0.00 36.82 1.89
1706 4556 5.992217 CCGAAGAAAGCCTAGCATAGTATTT 59.008 40.000 0.00 0.00 36.82 1.40
1707 4557 7.152645 CCGAAGAAAGCCTAGCATAGTATTTA 58.847 38.462 0.00 0.00 36.82 1.40
1708 4558 7.329717 CCGAAGAAAGCCTAGCATAGTATTTAG 59.670 40.741 0.00 0.00 36.82 1.85
1709 4559 7.148722 CGAAGAAAGCCTAGCATAGTATTTAGC 60.149 40.741 0.00 0.00 36.82 3.09
1710 4560 7.309770 AGAAAGCCTAGCATAGTATTTAGCT 57.690 36.000 0.00 0.00 36.82 3.32
1711 4561 7.382898 AGAAAGCCTAGCATAGTATTTAGCTC 58.617 38.462 0.00 0.00 36.82 4.09
1712 4562 6.926630 AAGCCTAGCATAGTATTTAGCTCT 57.073 37.500 0.00 0.00 36.82 4.09
1713 4563 6.926630 AGCCTAGCATAGTATTTAGCTCTT 57.073 37.500 0.00 0.00 36.82 2.85
1714 4564 7.309770 AGCCTAGCATAGTATTTAGCTCTTT 57.690 36.000 0.00 0.00 36.82 2.52
1715 4565 7.740805 AGCCTAGCATAGTATTTAGCTCTTTT 58.259 34.615 0.00 0.00 36.82 2.27
1716 4566 8.214364 AGCCTAGCATAGTATTTAGCTCTTTTT 58.786 33.333 0.00 0.00 36.82 1.94
1717 4567 8.499967 GCCTAGCATAGTATTTAGCTCTTTTTC 58.500 37.037 0.00 0.00 36.82 2.29
1718 4568 8.994170 CCTAGCATAGTATTTAGCTCTTTTTCC 58.006 37.037 0.00 0.00 36.82 3.13
1719 4569 9.547753 CTAGCATAGTATTTAGCTCTTTTTCCA 57.452 33.333 0.00 0.00 38.47 3.53
1720 4570 8.807948 AGCATAGTATTTAGCTCTTTTTCCAA 57.192 30.769 0.00 0.00 30.05 3.53
1721 4571 8.897752 AGCATAGTATTTAGCTCTTTTTCCAAG 58.102 33.333 0.00 0.00 30.05 3.61
1722 4572 7.645735 GCATAGTATTTAGCTCTTTTTCCAAGC 59.354 37.037 0.00 0.00 36.27 4.01
1723 4573 8.677300 CATAGTATTTAGCTCTTTTTCCAAGCA 58.323 33.333 0.00 0.00 38.51 3.91
1724 4574 7.524717 AGTATTTAGCTCTTTTTCCAAGCAA 57.475 32.000 0.00 0.00 38.51 3.91
1725 4575 7.371159 AGTATTTAGCTCTTTTTCCAAGCAAC 58.629 34.615 0.00 0.00 38.51 4.17
1726 4576 2.781945 AGCTCTTTTTCCAAGCAACG 57.218 45.000 0.00 0.00 38.51 4.10
1727 4577 1.338020 AGCTCTTTTTCCAAGCAACGG 59.662 47.619 0.00 0.00 38.51 4.44
1728 4578 1.770957 CTCTTTTTCCAAGCAACGGC 58.229 50.000 0.00 0.00 41.61 5.68
1729 4579 1.066908 CTCTTTTTCCAAGCAACGGCA 59.933 47.619 0.00 0.00 44.61 5.69
1730 4580 1.066908 TCTTTTTCCAAGCAACGGCAG 59.933 47.619 0.00 0.00 44.61 4.85
1731 4581 0.529555 TTTTTCCAAGCAACGGCAGC 60.530 50.000 0.00 0.00 44.61 5.25
1732 4582 1.391157 TTTTCCAAGCAACGGCAGCT 61.391 50.000 0.00 0.00 45.97 4.24
1733 4583 1.795170 TTTCCAAGCAACGGCAGCTC 61.795 55.000 0.00 0.00 42.53 4.09
1734 4584 2.956799 TTCCAAGCAACGGCAGCTCA 62.957 55.000 0.00 0.00 42.53 4.26
1735 4585 2.253452 CAAGCAACGGCAGCTCAC 59.747 61.111 0.00 0.00 42.53 3.51
1736 4586 2.980233 AAGCAACGGCAGCTCACC 60.980 61.111 0.00 0.00 42.53 4.02
1737 4587 3.772853 AAGCAACGGCAGCTCACCA 62.773 57.895 3.29 0.00 42.53 4.17
1738 4588 4.030452 GCAACGGCAGCTCACCAC 62.030 66.667 3.29 0.00 40.72 4.16
1739 4589 2.281070 CAACGGCAGCTCACCACT 60.281 61.111 3.29 0.00 0.00 4.00
1740 4590 2.031163 AACGGCAGCTCACCACTC 59.969 61.111 3.29 0.00 0.00 3.51
1741 4591 3.537206 AACGGCAGCTCACCACTCC 62.537 63.158 3.29 0.00 0.00 3.85
1742 4592 4.007644 CGGCAGCTCACCACTCCA 62.008 66.667 3.29 0.00 0.00 3.86
1743 4593 2.359230 GGCAGCTCACCACTCCAC 60.359 66.667 0.00 0.00 0.00 4.02
1744 4594 2.359230 GCAGCTCACCACTCCACC 60.359 66.667 0.00 0.00 0.00 4.61
1745 4595 3.150949 CAGCTCACCACTCCACCA 58.849 61.111 0.00 0.00 0.00 4.17
1746 4596 1.004080 CAGCTCACCACTCCACCAG 60.004 63.158 0.00 0.00 0.00 4.00
1747 4597 2.359230 GCTCACCACTCCACCAGC 60.359 66.667 0.00 0.00 0.00 4.85
1748 4598 3.150949 CTCACCACTCCACCAGCA 58.849 61.111 0.00 0.00 0.00 4.41
1749 4599 1.004080 CTCACCACTCCACCAGCAG 60.004 63.158 0.00 0.00 0.00 4.24
1750 4600 2.670934 CACCACTCCACCAGCAGC 60.671 66.667 0.00 0.00 0.00 5.25
1751 4601 3.170672 ACCACTCCACCAGCAGCA 61.171 61.111 0.00 0.00 0.00 4.41
1752 4602 2.359602 CCACTCCACCAGCAGCAG 60.360 66.667 0.00 0.00 0.00 4.24
1753 4603 3.054503 CACTCCACCAGCAGCAGC 61.055 66.667 0.00 0.00 42.56 5.25
1754 4604 4.341783 ACTCCACCAGCAGCAGCC 62.342 66.667 0.00 0.00 43.56 4.85
1767 4617 2.027460 CAGCCGTGCAACCCAAAC 59.973 61.111 0.00 0.00 0.00 2.93
1768 4618 2.441164 AGCCGTGCAACCCAAACA 60.441 55.556 0.00 0.00 0.00 2.83
1769 4619 2.027460 GCCGTGCAACCCAAACAG 59.973 61.111 0.00 0.00 0.00 3.16
1770 4620 2.727544 CCGTGCAACCCAAACAGG 59.272 61.111 0.00 0.00 37.03 4.00
1771 4621 2.124693 CCGTGCAACCCAAACAGGT 61.125 57.895 0.00 0.00 44.00 4.00
1772 4622 1.065600 CGTGCAACCCAAACAGGTG 59.934 57.895 0.00 0.00 40.05 4.00
1773 4623 1.662438 CGTGCAACCCAAACAGGTGT 61.662 55.000 0.00 0.00 40.05 4.16
1774 4624 0.534873 GTGCAACCCAAACAGGTGTT 59.465 50.000 0.00 0.00 40.05 3.32
1775 4625 0.534412 TGCAACCCAAACAGGTGTTG 59.466 50.000 0.00 9.62 44.59 3.33
1776 4626 3.360886 CAACCCAAACAGGTGTTGC 57.639 52.632 0.00 0.00 40.05 4.17
1777 4627 0.823460 CAACCCAAACAGGTGTTGCT 59.177 50.000 0.00 0.00 40.05 3.91
1778 4628 0.823460 AACCCAAACAGGTGTTGCTG 59.177 50.000 0.00 0.00 40.05 4.41
1779 4629 1.067916 CCCAAACAGGTGTTGCTGC 59.932 57.895 0.00 0.00 38.44 5.25
1780 4630 1.394266 CCCAAACAGGTGTTGCTGCT 61.394 55.000 0.00 0.00 38.44 4.24
1781 4631 0.249155 CCAAACAGGTGTTGCTGCTG 60.249 55.000 0.00 0.00 38.44 4.41
1782 4632 0.249155 CAAACAGGTGTTGCTGCTGG 60.249 55.000 0.00 0.00 38.44 4.85
1783 4633 0.395586 AAACAGGTGTTGCTGCTGGA 60.396 50.000 0.00 0.00 38.44 3.86
1784 4634 0.178981 AACAGGTGTTGCTGCTGGAT 60.179 50.000 0.00 0.00 36.80 3.41
1785 4635 0.892358 ACAGGTGTTGCTGCTGGATG 60.892 55.000 0.00 0.00 0.00 3.51
1786 4636 1.303888 AGGTGTTGCTGCTGGATGG 60.304 57.895 0.00 0.00 0.00 3.51
1787 4637 2.570181 GTGTTGCTGCTGGATGGC 59.430 61.111 0.00 0.00 0.00 4.40
1788 4638 2.677524 TGTTGCTGCTGGATGGCC 60.678 61.111 0.00 0.00 0.00 5.36
1789 4639 3.455469 GTTGCTGCTGGATGGCCC 61.455 66.667 0.00 0.00 0.00 5.80
1790 4640 4.764771 TTGCTGCTGGATGGCCCC 62.765 66.667 0.00 0.00 0.00 5.80
1792 4642 4.764771 GCTGCTGGATGGCCCCAA 62.765 66.667 0.00 0.00 35.47 4.12
1793 4643 2.281091 CTGCTGGATGGCCCCAAT 59.719 61.111 0.00 0.00 35.47 3.16
1794 4644 1.382146 CTGCTGGATGGCCCCAATT 60.382 57.895 0.00 0.00 35.47 2.32
1795 4645 1.381599 TGCTGGATGGCCCCAATTC 60.382 57.895 0.00 0.00 35.47 2.17
1796 4646 1.075748 GCTGGATGGCCCCAATTCT 60.076 57.895 0.00 0.00 35.47 2.40
1797 4647 1.111715 GCTGGATGGCCCCAATTCTC 61.112 60.000 0.00 0.00 35.47 2.87
1798 4648 0.468771 CTGGATGGCCCCAATTCTCC 60.469 60.000 0.00 0.00 35.47 3.71
1799 4649 0.925720 TGGATGGCCCCAATTCTCCT 60.926 55.000 0.00 0.00 32.31 3.69
1800 4650 0.262876 GGATGGCCCCAATTCTCCTT 59.737 55.000 0.00 0.00 0.00 3.36
1801 4651 1.697284 GATGGCCCCAATTCTCCTTC 58.303 55.000 0.00 0.00 0.00 3.46
1802 4652 1.009997 ATGGCCCCAATTCTCCTTCA 58.990 50.000 0.00 0.00 0.00 3.02
1803 4653 1.009997 TGGCCCCAATTCTCCTTCAT 58.990 50.000 0.00 0.00 0.00 2.57
1804 4654 1.063717 TGGCCCCAATTCTCCTTCATC 60.064 52.381 0.00 0.00 0.00 2.92
1805 4655 1.312815 GCCCCAATTCTCCTTCATCG 58.687 55.000 0.00 0.00 0.00 3.84
1806 4656 1.312815 CCCCAATTCTCCTTCATCGC 58.687 55.000 0.00 0.00 0.00 4.58
1807 4657 1.312815 CCCAATTCTCCTTCATCGCC 58.687 55.000 0.00 0.00 0.00 5.54
1808 4658 1.408683 CCCAATTCTCCTTCATCGCCA 60.409 52.381 0.00 0.00 0.00 5.69
1809 4659 1.672881 CCAATTCTCCTTCATCGCCAC 59.327 52.381 0.00 0.00 0.00 5.01
1810 4660 2.636830 CAATTCTCCTTCATCGCCACT 58.363 47.619 0.00 0.00 0.00 4.00
1811 4661 3.012518 CAATTCTCCTTCATCGCCACTT 58.987 45.455 0.00 0.00 0.00 3.16
1812 4662 2.859165 TTCTCCTTCATCGCCACTTT 57.141 45.000 0.00 0.00 0.00 2.66
1813 4663 2.859165 TCTCCTTCATCGCCACTTTT 57.141 45.000 0.00 0.00 0.00 2.27
1814 4664 3.140325 TCTCCTTCATCGCCACTTTTT 57.860 42.857 0.00 0.00 0.00 1.94
1815 4665 2.813754 TCTCCTTCATCGCCACTTTTTG 59.186 45.455 0.00 0.00 0.00 2.44
1816 4666 2.813754 CTCCTTCATCGCCACTTTTTGA 59.186 45.455 0.00 0.00 0.00 2.69
1817 4667 3.420893 TCCTTCATCGCCACTTTTTGAT 58.579 40.909 0.00 0.00 0.00 2.57
1818 4668 3.440173 TCCTTCATCGCCACTTTTTGATC 59.560 43.478 0.00 0.00 0.00 2.92
1819 4669 3.428045 CCTTCATCGCCACTTTTTGATCC 60.428 47.826 0.00 0.00 0.00 3.36
1820 4670 2.091541 TCATCGCCACTTTTTGATCCC 58.908 47.619 0.00 0.00 0.00 3.85
1821 4671 1.818060 CATCGCCACTTTTTGATCCCA 59.182 47.619 0.00 0.00 0.00 4.37
1822 4672 1.533625 TCGCCACTTTTTGATCCCAG 58.466 50.000 0.00 0.00 0.00 4.45
1823 4673 0.109132 CGCCACTTTTTGATCCCAGC 60.109 55.000 0.00 0.00 0.00 4.85
1824 4674 0.247460 GCCACTTTTTGATCCCAGCC 59.753 55.000 0.00 0.00 0.00 4.85
1825 4675 1.631405 CCACTTTTTGATCCCAGCCA 58.369 50.000 0.00 0.00 0.00 4.75
1826 4676 1.969923 CCACTTTTTGATCCCAGCCAA 59.030 47.619 0.00 0.00 0.00 4.52
1827 4677 2.289010 CCACTTTTTGATCCCAGCCAAC 60.289 50.000 0.00 0.00 0.00 3.77
1828 4678 1.970640 ACTTTTTGATCCCAGCCAACC 59.029 47.619 0.00 0.00 0.00 3.77
1829 4679 1.969923 CTTTTTGATCCCAGCCAACCA 59.030 47.619 0.00 0.00 0.00 3.67
1830 4680 2.094100 TTTTGATCCCAGCCAACCAA 57.906 45.000 0.00 0.00 0.00 3.67
1831 4681 1.631405 TTTGATCCCAGCCAACCAAG 58.369 50.000 0.00 0.00 0.00 3.61
1832 4682 0.776810 TTGATCCCAGCCAACCAAGA 59.223 50.000 0.00 0.00 0.00 3.02
1833 4683 0.038166 TGATCCCAGCCAACCAAGAC 59.962 55.000 0.00 0.00 0.00 3.01
1834 4684 0.329596 GATCCCAGCCAACCAAGACT 59.670 55.000 0.00 0.00 0.00 3.24
1835 4685 0.329596 ATCCCAGCCAACCAAGACTC 59.670 55.000 0.00 0.00 0.00 3.36
1836 4686 1.059584 TCCCAGCCAACCAAGACTCA 61.060 55.000 0.00 0.00 0.00 3.41
1837 4687 0.038744 CCCAGCCAACCAAGACTCAT 59.961 55.000 0.00 0.00 0.00 2.90
1838 4688 1.281867 CCCAGCCAACCAAGACTCATA 59.718 52.381 0.00 0.00 0.00 2.15
1839 4689 2.636830 CCAGCCAACCAAGACTCATAG 58.363 52.381 0.00 0.00 0.00 2.23
1840 4690 2.026822 CCAGCCAACCAAGACTCATAGT 60.027 50.000 0.00 0.00 0.00 2.12
1841 4691 3.560025 CCAGCCAACCAAGACTCATAGTT 60.560 47.826 0.00 0.00 0.00 2.24
1842 4692 3.438087 CAGCCAACCAAGACTCATAGTTG 59.562 47.826 0.00 0.00 38.00 3.16
1843 4693 2.162408 GCCAACCAAGACTCATAGTTGC 59.838 50.000 0.00 0.00 37.17 4.17
1844 4694 2.749621 CCAACCAAGACTCATAGTTGCC 59.250 50.000 0.00 0.00 37.17 4.52
1845 4695 3.411446 CAACCAAGACTCATAGTTGCCA 58.589 45.455 0.00 0.00 32.30 4.92
1846 4696 4.012374 CAACCAAGACTCATAGTTGCCAT 58.988 43.478 0.00 0.00 32.30 4.40
1847 4697 3.614092 ACCAAGACTCATAGTTGCCATG 58.386 45.455 0.00 0.00 0.00 3.66
1848 4698 3.009473 ACCAAGACTCATAGTTGCCATGT 59.991 43.478 0.00 0.00 0.00 3.21
1849 4699 4.012374 CCAAGACTCATAGTTGCCATGTT 58.988 43.478 0.00 0.00 0.00 2.71
1850 4700 4.460382 CCAAGACTCATAGTTGCCATGTTT 59.540 41.667 0.00 0.00 0.00 2.83
1851 4701 5.392380 CCAAGACTCATAGTTGCCATGTTTC 60.392 44.000 0.00 0.00 0.00 2.78
1852 4702 4.265073 AGACTCATAGTTGCCATGTTTCC 58.735 43.478 0.00 0.00 0.00 3.13
1853 4703 3.009723 ACTCATAGTTGCCATGTTTCCG 58.990 45.455 0.00 0.00 0.00 4.30
1854 4704 2.355756 CTCATAGTTGCCATGTTTCCGG 59.644 50.000 0.00 0.00 0.00 5.14
1855 4705 2.091541 CATAGTTGCCATGTTTCCGGT 58.908 47.619 0.00 0.00 0.00 5.28
1856 4706 3.055021 TCATAGTTGCCATGTTTCCGGTA 60.055 43.478 0.00 0.00 0.00 4.02
1857 4707 2.507407 AGTTGCCATGTTTCCGGTAT 57.493 45.000 0.00 0.00 0.00 2.73
1858 4708 2.091541 AGTTGCCATGTTTCCGGTATG 58.908 47.619 0.00 2.63 0.00 2.39
1859 4709 2.088423 GTTGCCATGTTTCCGGTATGA 58.912 47.619 0.00 0.00 0.00 2.15
1860 4710 2.687935 GTTGCCATGTTTCCGGTATGAT 59.312 45.455 0.00 0.00 0.00 2.45
1861 4711 2.296792 TGCCATGTTTCCGGTATGATG 58.703 47.619 0.00 0.21 0.00 3.07
1862 4712 1.608590 GCCATGTTTCCGGTATGATGG 59.391 52.381 16.31 16.31 34.62 3.51
1863 4713 2.229792 CCATGTTTCCGGTATGATGGG 58.770 52.381 0.00 0.00 0.00 4.00
1864 4714 2.158682 CCATGTTTCCGGTATGATGGGA 60.159 50.000 0.00 0.00 0.00 4.37
1865 4715 3.550820 CATGTTTCCGGTATGATGGGAA 58.449 45.455 0.00 0.00 38.03 3.97
1866 4716 2.993937 TGTTTCCGGTATGATGGGAAC 58.006 47.619 0.00 0.00 42.99 3.62
1867 4717 1.937899 GTTTCCGGTATGATGGGAACG 59.062 52.381 0.00 0.00 39.43 3.95
1868 4718 1.487300 TTCCGGTATGATGGGAACGA 58.513 50.000 0.00 0.00 35.01 3.85
1869 4719 1.037493 TCCGGTATGATGGGAACGAG 58.963 55.000 0.00 0.00 0.00 4.18
1870 4720 0.033504 CCGGTATGATGGGAACGAGG 59.966 60.000 0.00 0.00 0.00 4.63
1871 4721 1.037493 CGGTATGATGGGAACGAGGA 58.963 55.000 0.00 0.00 0.00 3.71
1872 4722 1.411246 CGGTATGATGGGAACGAGGAA 59.589 52.381 0.00 0.00 0.00 3.36
1873 4723 2.802057 CGGTATGATGGGAACGAGGAAC 60.802 54.545 0.00 0.00 0.00 3.62
1883 4733 4.835927 CGAGGAACGGGAATGGAG 57.164 61.111 0.00 0.00 38.46 3.86
1884 4734 1.144057 CGAGGAACGGGAATGGAGG 59.856 63.158 0.00 0.00 38.46 4.30
1885 4735 1.327690 CGAGGAACGGGAATGGAGGA 61.328 60.000 0.00 0.00 38.46 3.71
1886 4736 0.178301 GAGGAACGGGAATGGAGGAC 59.822 60.000 0.00 0.00 0.00 3.85
1887 4737 1.153429 GGAACGGGAATGGAGGACG 60.153 63.158 0.00 0.00 0.00 4.79
1888 4738 1.610554 GGAACGGGAATGGAGGACGA 61.611 60.000 0.00 0.00 0.00 4.20
1889 4739 0.179108 GAACGGGAATGGAGGACGAG 60.179 60.000 0.00 0.00 0.00 4.18
1890 4740 0.613853 AACGGGAATGGAGGACGAGA 60.614 55.000 0.00 0.00 0.00 4.04
1891 4741 1.038130 ACGGGAATGGAGGACGAGAG 61.038 60.000 0.00 0.00 0.00 3.20
1929 4779 6.365970 AAATAGGATACAGATACAGCAGGG 57.634 41.667 0.00 0.00 41.41 4.45
1930 4780 2.614259 AGGATACAGATACAGCAGGGG 58.386 52.381 0.00 0.00 41.41 4.79
1931 4781 2.090494 AGGATACAGATACAGCAGGGGT 60.090 50.000 0.00 0.00 41.41 4.95
1932 4782 3.142217 AGGATACAGATACAGCAGGGGTA 59.858 47.826 0.00 0.00 41.41 3.69
1933 4783 4.097418 GGATACAGATACAGCAGGGGTAT 58.903 47.826 0.00 0.00 34.28 2.73
1934 4784 5.016352 AGGATACAGATACAGCAGGGGTATA 59.984 44.000 0.00 0.00 41.41 1.47
1935 4785 5.127356 GGATACAGATACAGCAGGGGTATAC 59.873 48.000 0.00 0.00 31.84 1.47
1936 4786 3.923648 ACAGATACAGCAGGGGTATACA 58.076 45.455 5.01 0.00 31.84 2.29
1937 4787 4.493618 ACAGATACAGCAGGGGTATACAT 58.506 43.478 5.01 0.00 31.84 2.29
1938 4788 4.528596 ACAGATACAGCAGGGGTATACATC 59.471 45.833 5.01 0.00 31.84 3.06
1939 4789 4.774726 CAGATACAGCAGGGGTATACATCT 59.225 45.833 5.01 0.00 31.84 2.90
1940 4790 5.020132 AGATACAGCAGGGGTATACATCTC 58.980 45.833 5.01 0.00 31.84 2.75
1941 4791 3.336509 ACAGCAGGGGTATACATCTCT 57.663 47.619 5.01 0.00 0.00 3.10
1942 4792 4.471078 ACAGCAGGGGTATACATCTCTA 57.529 45.455 5.01 0.00 0.00 2.43
1943 4793 4.411927 ACAGCAGGGGTATACATCTCTAG 58.588 47.826 5.01 0.00 0.00 2.43
1944 4794 4.106502 ACAGCAGGGGTATACATCTCTAGA 59.893 45.833 5.01 0.00 0.00 2.43
1945 4795 5.080337 CAGCAGGGGTATACATCTCTAGAA 58.920 45.833 5.01 0.00 0.00 2.10
1946 4796 5.047660 CAGCAGGGGTATACATCTCTAGAAC 60.048 48.000 5.01 0.00 0.00 3.01
1947 4797 4.082679 GCAGGGGTATACATCTCTAGAACG 60.083 50.000 5.01 0.00 0.00 3.95
1948 4798 5.314529 CAGGGGTATACATCTCTAGAACGA 58.685 45.833 5.01 0.00 0.00 3.85
1949 4799 5.946972 CAGGGGTATACATCTCTAGAACGAT 59.053 44.000 5.01 0.00 0.00 3.73
1950 4800 6.094325 CAGGGGTATACATCTCTAGAACGATC 59.906 46.154 5.01 0.00 0.00 3.69
1951 4801 6.012333 AGGGGTATACATCTCTAGAACGATCT 60.012 42.308 5.01 0.00 39.82 2.75
1952 4802 6.660094 GGGGTATACATCTCTAGAACGATCTT 59.340 42.308 0.00 0.00 37.10 2.40
1953 4803 7.177041 GGGGTATACATCTCTAGAACGATCTTT 59.823 40.741 0.00 0.00 37.10 2.52
1954 4804 8.238631 GGGTATACATCTCTAGAACGATCTTTC 58.761 40.741 0.00 3.80 37.10 2.62
1955 4805 9.005777 GGTATACATCTCTAGAACGATCTTTCT 57.994 37.037 17.53 17.53 39.28 2.52
1960 4810 7.918562 ACATCTCTAGAACGATCTTTCTAAAGC 59.081 37.037 18.99 0.00 37.58 3.51
1961 4811 7.392494 TCTCTAGAACGATCTTTCTAAAGCA 57.608 36.000 18.99 6.70 37.58 3.91
1962 4812 7.476667 TCTCTAGAACGATCTTTCTAAAGCAG 58.523 38.462 18.99 11.19 37.58 4.24
1963 4813 7.337184 TCTCTAGAACGATCTTTCTAAAGCAGA 59.663 37.037 18.99 14.07 37.58 4.26
1964 4814 7.827701 TCTAGAACGATCTTTCTAAAGCAGAA 58.172 34.615 18.99 1.15 41.66 3.02
1966 4816 7.123160 AGAACGATCTTTCTAAAGCAGAAAC 57.877 36.000 12.47 0.00 46.16 2.78
1967 4817 5.517037 ACGATCTTTCTAAAGCAGAAACG 57.483 39.130 0.00 6.67 46.16 3.60
1968 4818 4.143094 ACGATCTTTCTAAAGCAGAAACGC 60.143 41.667 0.00 0.00 46.16 4.84
1969 4819 3.788434 TCTTTCTAAAGCAGAAACGCG 57.212 42.857 3.53 3.53 46.16 6.01
1970 4820 3.386486 TCTTTCTAAAGCAGAAACGCGA 58.614 40.909 15.93 0.00 46.16 5.87
1971 4821 3.994392 TCTTTCTAAAGCAGAAACGCGAT 59.006 39.130 15.93 0.00 46.16 4.58
1972 4822 4.451096 TCTTTCTAAAGCAGAAACGCGATT 59.549 37.500 15.93 7.45 46.16 3.34
1973 4823 3.991605 TCTAAAGCAGAAACGCGATTC 57.008 42.857 20.11 20.11 36.85 2.52
1974 4824 3.322369 TCTAAAGCAGAAACGCGATTCA 58.678 40.909 27.57 7.95 36.85 2.57
1975 4825 3.743911 TCTAAAGCAGAAACGCGATTCAA 59.256 39.130 27.57 7.70 36.85 2.69
1976 4826 3.559238 AAAGCAGAAACGCGATTCAAT 57.441 38.095 27.57 12.29 36.85 2.57
1977 4827 2.813779 AGCAGAAACGCGATTCAATC 57.186 45.000 27.57 16.54 36.85 2.67
1978 4828 2.076100 AGCAGAAACGCGATTCAATCA 58.924 42.857 27.57 0.00 36.85 2.57
1979 4829 2.483877 AGCAGAAACGCGATTCAATCAA 59.516 40.909 27.57 0.00 36.85 2.57
1980 4830 3.127548 AGCAGAAACGCGATTCAATCAAT 59.872 39.130 27.57 6.21 36.85 2.57
1981 4831 3.853671 GCAGAAACGCGATTCAATCAATT 59.146 39.130 27.57 5.52 0.00 2.32
1982 4832 4.028187 GCAGAAACGCGATTCAATCAATTC 60.028 41.667 27.57 9.42 0.00 2.17
1983 4833 4.496895 CAGAAACGCGATTCAATCAATTCC 59.503 41.667 27.57 0.86 0.00 3.01
1984 4834 2.737467 ACGCGATTCAATCAATTCCG 57.263 45.000 15.93 0.00 0.00 4.30
1985 4835 1.330521 ACGCGATTCAATCAATTCCGG 59.669 47.619 15.93 0.00 0.00 5.14
1986 4836 1.330521 CGCGATTCAATCAATTCCGGT 59.669 47.619 0.00 0.00 0.00 5.28
1987 4837 2.542178 CGCGATTCAATCAATTCCGGTA 59.458 45.455 0.00 0.00 0.00 4.02
1988 4838 3.603857 CGCGATTCAATCAATTCCGGTAC 60.604 47.826 0.00 0.00 0.00 3.34
2025 4875 7.979444 ATAATACCATGGAATAAGGAACGTG 57.021 36.000 21.47 0.00 0.00 4.49
2026 4876 3.992943 ACCATGGAATAAGGAACGTGA 57.007 42.857 21.47 0.00 0.00 4.35
2027 4877 4.295141 ACCATGGAATAAGGAACGTGAA 57.705 40.909 21.47 0.00 0.00 3.18
2028 4878 4.855340 ACCATGGAATAAGGAACGTGAAT 58.145 39.130 21.47 0.00 0.00 2.57
2029 4879 5.996644 ACCATGGAATAAGGAACGTGAATA 58.003 37.500 21.47 0.00 0.00 1.75
2030 4880 6.601332 ACCATGGAATAAGGAACGTGAATAT 58.399 36.000 21.47 0.00 0.00 1.28
2031 4881 7.060421 ACCATGGAATAAGGAACGTGAATATT 58.940 34.615 21.47 0.00 0.00 1.28
2032 4882 7.559897 ACCATGGAATAAGGAACGTGAATATTT 59.440 33.333 21.47 0.00 0.00 1.40
2033 4883 9.062524 CCATGGAATAAGGAACGTGAATATTTA 57.937 33.333 5.56 0.00 0.00 1.40
2034 4884 9.878599 CATGGAATAAGGAACGTGAATATTTAC 57.121 33.333 0.32 0.32 0.00 2.01
2035 4885 8.133754 TGGAATAAGGAACGTGAATATTTACG 57.866 34.615 25.78 25.78 45.19 3.18
2036 4886 7.225145 TGGAATAAGGAACGTGAATATTTACGG 59.775 37.037 29.17 15.69 44.07 4.02
2037 4887 7.439056 GGAATAAGGAACGTGAATATTTACGGA 59.561 37.037 29.17 12.51 44.07 4.69
2038 4888 8.897872 AATAAGGAACGTGAATATTTACGGAT 57.102 30.769 29.17 20.32 44.07 4.18
2039 4889 6.598753 AAGGAACGTGAATATTTACGGATG 57.401 37.500 29.17 8.97 44.07 3.51
2040 4890 4.510340 AGGAACGTGAATATTTACGGATGC 59.490 41.667 29.17 22.98 44.07 3.91
2041 4891 4.442705 GAACGTGAATATTTACGGATGCG 58.557 43.478 29.17 4.58 44.07 4.73
2042 4892 2.798283 ACGTGAATATTTACGGATGCGG 59.202 45.455 29.17 7.45 44.07 5.69
2043 4893 2.156891 CGTGAATATTTACGGATGCGGG 59.843 50.000 21.41 0.00 36.71 6.13
2044 4894 2.482721 GTGAATATTTACGGATGCGGGG 59.517 50.000 12.44 0.00 0.00 5.73
2045 4895 2.369203 TGAATATTTACGGATGCGGGGA 59.631 45.455 12.44 0.00 0.00 4.81
2046 4896 2.762535 ATATTTACGGATGCGGGGAG 57.237 50.000 12.44 0.00 0.00 4.30
2063 4913 3.650950 GCAACTGGCTGGGAGGGA 61.651 66.667 0.00 0.00 40.25 4.20
2064 4914 2.352805 CAACTGGCTGGGAGGGAC 59.647 66.667 0.00 0.00 0.00 4.46
2065 4915 2.936032 AACTGGCTGGGAGGGACC 60.936 66.667 0.00 0.00 38.08 4.46
2071 4921 4.075793 CTGGGAGGGACCGAGGGA 62.076 72.222 0.00 0.00 40.18 4.20
2072 4922 4.075793 TGGGAGGGACCGAGGGAG 62.076 72.222 0.00 0.00 40.11 4.30
2073 4923 4.077180 GGGAGGGACCGAGGGAGT 62.077 72.222 0.00 0.00 40.11 3.85
2074 4924 2.698075 GGGAGGGACCGAGGGAGTA 61.698 68.421 0.00 0.00 40.11 2.59
2075 4925 1.455402 GGAGGGACCGAGGGAGTAC 60.455 68.421 0.00 0.00 0.00 2.73
2076 4926 1.614160 GAGGGACCGAGGGAGTACT 59.386 63.158 0.00 0.00 0.00 2.73
2077 4927 0.033306 GAGGGACCGAGGGAGTACTT 60.033 60.000 0.00 0.00 0.00 2.24
2078 4928 1.213926 GAGGGACCGAGGGAGTACTTA 59.786 57.143 0.00 0.00 0.00 2.24
2079 4929 1.858246 AGGGACCGAGGGAGTACTTAT 59.142 52.381 0.00 0.00 0.00 1.73
2080 4930 3.059097 AGGGACCGAGGGAGTACTTATA 58.941 50.000 0.00 0.00 0.00 0.98
2081 4931 3.153130 GGGACCGAGGGAGTACTTATAC 58.847 54.545 0.00 0.00 0.00 1.47
2082 4932 3.435601 GGGACCGAGGGAGTACTTATACA 60.436 52.174 0.00 0.00 33.30 2.29
2083 4933 3.819902 GGACCGAGGGAGTACTTATACAG 59.180 52.174 0.00 0.00 33.30 2.74
2084 4934 3.819902 GACCGAGGGAGTACTTATACAGG 59.180 52.174 0.00 0.00 33.30 4.00
2085 4935 3.155501 CCGAGGGAGTACTTATACAGGG 58.844 54.545 0.00 0.00 33.30 4.45
2086 4936 3.181436 CCGAGGGAGTACTTATACAGGGA 60.181 52.174 0.00 0.00 33.30 4.20
2087 4937 4.467769 CGAGGGAGTACTTATACAGGGAA 58.532 47.826 0.00 0.00 33.30 3.97
2088 4938 4.277921 CGAGGGAGTACTTATACAGGGAAC 59.722 50.000 0.00 0.00 33.30 3.62
2089 4939 5.456779 GAGGGAGTACTTATACAGGGAACT 58.543 45.833 0.00 0.00 46.44 3.01
2099 4949 3.655211 AGGGAACTGCTGGGCTGG 61.655 66.667 0.00 0.00 41.13 4.85
2100 4950 4.748144 GGGAACTGCTGGGCTGGG 62.748 72.222 0.00 0.00 0.00 4.45
2101 4951 3.650950 GGAACTGCTGGGCTGGGA 61.651 66.667 0.00 0.00 0.00 4.37
2102 4952 2.045536 GAACTGCTGGGCTGGGAG 60.046 66.667 0.00 0.00 0.00 4.30
2103 4953 4.357279 AACTGCTGGGCTGGGAGC 62.357 66.667 0.00 0.00 41.46 4.70
2105 4955 4.355720 CTGCTGGGCTGGGAGCAA 62.356 66.667 0.00 0.00 44.44 3.91
2106 4956 4.666253 TGCTGGGCTGGGAGCAAC 62.666 66.667 0.00 0.00 44.75 4.17
2107 4957 4.357279 GCTGGGCTGGGAGCAACT 62.357 66.667 0.00 0.00 44.75 3.16
2108 4958 2.360852 CTGGGCTGGGAGCAACTG 60.361 66.667 0.00 0.00 44.75 3.16
2109 4959 3.933048 CTGGGCTGGGAGCAACTGG 62.933 68.421 0.00 0.00 44.75 4.00
2110 4960 3.971702 GGGCTGGGAGCAACTGGT 61.972 66.667 0.00 0.00 44.75 4.00
2111 4961 2.116125 GGCTGGGAGCAACTGGTT 59.884 61.111 0.00 0.00 44.75 3.67
2112 4962 2.270986 GGCTGGGAGCAACTGGTTG 61.271 63.158 8.89 8.89 44.75 3.77
2121 4971 2.527671 CAACTGGTTGCATCGTCGA 58.472 52.632 0.00 0.00 33.45 4.20
2122 4972 1.078709 CAACTGGTTGCATCGTCGAT 58.921 50.000 0.75 0.75 33.45 3.59
2123 4973 1.061131 CAACTGGTTGCATCGTCGATC 59.939 52.381 4.34 1.48 33.45 3.69
2124 4974 0.460284 ACTGGTTGCATCGTCGATCC 60.460 55.000 4.34 4.25 0.00 3.36
2125 4975 0.460109 CTGGTTGCATCGTCGATCCA 60.460 55.000 4.34 8.84 0.00 3.41
2126 4976 0.177836 TGGTTGCATCGTCGATCCAT 59.822 50.000 4.34 0.00 0.00 3.41
2127 4977 0.583438 GGTTGCATCGTCGATCCATG 59.417 55.000 4.34 0.00 0.00 3.66
2128 4978 1.570813 GTTGCATCGTCGATCCATGA 58.429 50.000 4.34 0.00 0.00 3.07
2129 4979 1.933181 GTTGCATCGTCGATCCATGAA 59.067 47.619 4.34 0.00 0.00 2.57
2130 4980 1.856802 TGCATCGTCGATCCATGAAG 58.143 50.000 4.34 0.00 0.00 3.02
2131 4981 1.408702 TGCATCGTCGATCCATGAAGA 59.591 47.619 4.34 0.00 0.00 2.87
2132 4982 1.789464 GCATCGTCGATCCATGAAGAC 59.211 52.381 4.34 0.00 0.00 3.01
2133 4983 2.544694 GCATCGTCGATCCATGAAGACT 60.545 50.000 4.34 0.00 0.00 3.24
2134 4984 3.304726 GCATCGTCGATCCATGAAGACTA 60.305 47.826 4.34 0.00 0.00 2.59
2135 4985 4.793028 GCATCGTCGATCCATGAAGACTAA 60.793 45.833 4.34 0.00 0.00 2.24
2136 4986 4.976224 TCGTCGATCCATGAAGACTAAA 57.024 40.909 0.00 0.00 0.00 1.85
2137 4987 5.319140 TCGTCGATCCATGAAGACTAAAA 57.681 39.130 0.00 0.00 0.00 1.52
2138 4988 5.902681 TCGTCGATCCATGAAGACTAAAAT 58.097 37.500 0.00 0.00 0.00 1.82
2139 4989 7.034685 TCGTCGATCCATGAAGACTAAAATA 57.965 36.000 0.00 0.00 0.00 1.40
2140 4990 7.485810 TCGTCGATCCATGAAGACTAAAATAA 58.514 34.615 0.00 0.00 0.00 1.40
2141 4991 7.977293 TCGTCGATCCATGAAGACTAAAATAAA 59.023 33.333 0.00 0.00 0.00 1.40
2142 4992 8.765219 CGTCGATCCATGAAGACTAAAATAAAT 58.235 33.333 0.00 0.00 0.00 1.40
2144 4994 9.830975 TCGATCCATGAAGACTAAAATAAATCA 57.169 29.630 0.00 0.00 0.00 2.57
2154 5004 9.634021 AAGACTAAAATAAATCATCTCCTTCCC 57.366 33.333 0.00 0.00 0.00 3.97
2155 5005 8.781951 AGACTAAAATAAATCATCTCCTTCCCA 58.218 33.333 0.00 0.00 0.00 4.37
2156 5006 9.408648 GACTAAAATAAATCATCTCCTTCCCAA 57.591 33.333 0.00 0.00 0.00 4.12
2157 5007 9.942526 ACTAAAATAAATCATCTCCTTCCCAAT 57.057 29.630 0.00 0.00 0.00 3.16
2159 5009 7.607615 AAATAAATCATCTCCTTCCCAATGG 57.392 36.000 0.00 0.00 0.00 3.16
2160 5010 4.886755 AAATCATCTCCTTCCCAATGGA 57.113 40.909 0.00 0.00 39.54 3.41
2175 5025 6.581712 TCCCAATGGAAAATTTATTAGCAGC 58.418 36.000 0.00 0.00 37.86 5.25
2176 5026 5.759763 CCCAATGGAAAATTTATTAGCAGCC 59.240 40.000 0.00 0.00 0.00 4.85
2177 5027 6.408434 CCCAATGGAAAATTTATTAGCAGCCT 60.408 38.462 0.00 0.00 0.00 4.58
2178 5028 7.049754 CCAATGGAAAATTTATTAGCAGCCTT 58.950 34.615 0.00 0.00 0.00 4.35
2179 5029 7.011669 CCAATGGAAAATTTATTAGCAGCCTTG 59.988 37.037 0.00 0.00 0.00 3.61
2180 5030 5.976458 TGGAAAATTTATTAGCAGCCTTGG 58.024 37.500 0.00 0.00 0.00 3.61
2181 5031 5.719085 TGGAAAATTTATTAGCAGCCTTGGA 59.281 36.000 0.00 0.00 0.00 3.53
2182 5032 6.127366 TGGAAAATTTATTAGCAGCCTTGGAG 60.127 38.462 0.00 0.00 0.00 3.86
2183 5033 6.127338 GGAAAATTTATTAGCAGCCTTGGAGT 60.127 38.462 0.00 0.00 0.00 3.85
2184 5034 7.068226 GGAAAATTTATTAGCAGCCTTGGAGTA 59.932 37.037 0.00 0.00 0.00 2.59
2185 5035 7.954666 AAATTTATTAGCAGCCTTGGAGTAA 57.045 32.000 0.00 0.00 0.00 2.24
2186 5036 8.539117 AAATTTATTAGCAGCCTTGGAGTAAT 57.461 30.769 0.00 0.00 0.00 1.89
2187 5037 8.539117 AATTTATTAGCAGCCTTGGAGTAATT 57.461 30.769 0.00 0.00 0.00 1.40
2188 5038 6.942532 TTATTAGCAGCCTTGGAGTAATTG 57.057 37.500 0.00 0.00 0.00 2.32
2189 5039 2.134789 AGCAGCCTTGGAGTAATTGG 57.865 50.000 0.00 0.00 0.00 3.16
2190 5040 1.635487 AGCAGCCTTGGAGTAATTGGA 59.365 47.619 0.00 0.00 0.00 3.53
2191 5041 2.041620 AGCAGCCTTGGAGTAATTGGAA 59.958 45.455 0.00 0.00 0.00 3.53
2192 5042 2.825532 GCAGCCTTGGAGTAATTGGAAA 59.174 45.455 0.00 0.00 0.00 3.13
2193 5043 3.119352 GCAGCCTTGGAGTAATTGGAAAG 60.119 47.826 0.00 0.00 0.00 2.62
2194 5044 3.092301 AGCCTTGGAGTAATTGGAAAGC 58.908 45.455 0.00 0.00 0.00 3.51
2195 5045 2.825532 GCCTTGGAGTAATTGGAAAGCA 59.174 45.455 0.00 0.00 0.00 3.91
2196 5046 3.119352 GCCTTGGAGTAATTGGAAAGCAG 60.119 47.826 0.00 0.00 0.00 4.24
2197 5047 4.335416 CCTTGGAGTAATTGGAAAGCAGA 58.665 43.478 0.00 0.00 0.00 4.26
2198 5048 4.766891 CCTTGGAGTAATTGGAAAGCAGAA 59.233 41.667 0.00 0.00 0.00 3.02
2199 5049 5.335976 CCTTGGAGTAATTGGAAAGCAGAAC 60.336 44.000 0.00 0.00 0.00 3.01
2200 5050 3.751175 TGGAGTAATTGGAAAGCAGAACG 59.249 43.478 0.00 0.00 0.00 3.95
2201 5051 4.000988 GGAGTAATTGGAAAGCAGAACGA 58.999 43.478 0.00 0.00 0.00 3.85
2202 5052 4.093556 GGAGTAATTGGAAAGCAGAACGAG 59.906 45.833 0.00 0.00 0.00 4.18
2203 5053 4.003648 AGTAATTGGAAAGCAGAACGAGG 58.996 43.478 0.00 0.00 0.00 4.63
2204 5054 2.859165 ATTGGAAAGCAGAACGAGGA 57.141 45.000 0.00 0.00 0.00 3.71
2205 5055 2.169832 TTGGAAAGCAGAACGAGGAG 57.830 50.000 0.00 0.00 0.00 3.69
2206 5056 1.048601 TGGAAAGCAGAACGAGGAGT 58.951 50.000 0.00 0.00 0.00 3.85
2208 5058 2.631062 TGGAAAGCAGAACGAGGAGTTA 59.369 45.455 0.00 0.00 44.35 2.24
2209 5059 3.260884 TGGAAAGCAGAACGAGGAGTTAT 59.739 43.478 0.00 0.00 44.35 1.89
2210 5060 4.254492 GGAAAGCAGAACGAGGAGTTATT 58.746 43.478 0.00 0.00 44.35 1.40
2211 5061 4.695928 GGAAAGCAGAACGAGGAGTTATTT 59.304 41.667 0.00 0.00 44.35 1.40
2212 5062 5.873164 GGAAAGCAGAACGAGGAGTTATTTA 59.127 40.000 0.00 0.00 44.35 1.40
2213 5063 6.370718 GGAAAGCAGAACGAGGAGTTATTTAA 59.629 38.462 0.00 0.00 44.35 1.52
2214 5064 6.969828 AAGCAGAACGAGGAGTTATTTAAG 57.030 37.500 0.00 0.00 44.35 1.85
2215 5065 5.420409 AGCAGAACGAGGAGTTATTTAAGG 58.580 41.667 0.00 0.00 44.35 2.69
2216 5066 4.571176 GCAGAACGAGGAGTTATTTAAGGG 59.429 45.833 0.00 0.00 44.35 3.95
2217 5067 5.626116 GCAGAACGAGGAGTTATTTAAGGGA 60.626 44.000 0.00 0.00 44.35 4.20
2218 5068 6.043411 CAGAACGAGGAGTTATTTAAGGGAG 58.957 44.000 0.00 0.00 44.35 4.30
2219 5069 5.720520 AGAACGAGGAGTTATTTAAGGGAGT 59.279 40.000 0.00 0.00 44.35 3.85
2220 5070 5.340439 ACGAGGAGTTATTTAAGGGAGTG 57.660 43.478 0.00 0.00 0.00 3.51
2221 5071 4.161754 ACGAGGAGTTATTTAAGGGAGTGG 59.838 45.833 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 8.623903 GCAGTTTTGAATGATCCAACATATCTA 58.376 33.333 0.00 0.00 0.00 1.98
131 132 7.360361 ACTCAGTCGGATTTATTTTGTTTCAC 58.640 34.615 0.00 0.00 0.00 3.18
338 339 5.717078 TGACTCCGTAACTGTTGTTAGAT 57.283 39.130 2.69 0.00 39.09 1.98
478 479 7.724305 TCTTAGAGAAAACTTTACATGCGTT 57.276 32.000 0.00 0.00 0.00 4.84
519 520 4.119155 TCTCCAGGGATAGGTTGGAAATT 58.881 43.478 0.00 0.00 40.29 1.82
644 646 0.834687 TCAAGAGGTAACGCCACCCT 60.835 55.000 2.52 0.00 46.39 4.34
647 649 2.190981 CGTATCAAGAGGTAACGCCAC 58.809 52.381 0.00 0.00 46.39 5.01
694 696 2.248248 GGCTTCCTTGGGCTTTACTTT 58.752 47.619 0.00 0.00 0.00 2.66
776 778 8.647796 TCTTGTCTTACAAAGTAGGATCAAGAA 58.352 33.333 19.25 11.08 37.69 2.52
851 853 7.202526 GCATTATTTTAGGTTGCTGATTGCTA 58.797 34.615 0.00 0.00 43.37 3.49
890 893 2.897271 TGGGGCTTCAAGCAATCTAA 57.103 45.000 12.53 0.00 44.75 2.10
982 985 0.320771 ATCCGCGTTGACTTCAGCTT 60.321 50.000 4.92 0.00 0.00 3.74
1012 1015 3.790437 CAGGGCATGCTCTCCGGT 61.790 66.667 19.76 0.00 0.00 5.28
1032 1035 2.202756 GCGACGACTCCATCCACC 60.203 66.667 0.00 0.00 0.00 4.61
1146 1149 1.134551 TCATGCACGCTAGCCACAATA 60.135 47.619 9.66 0.00 0.00 1.90
1186 1189 6.091441 CGCATCCATTCTATTAGGAAGCTAAC 59.909 42.308 0.00 0.00 42.31 2.34
1202 1205 2.365617 ACTTATCTCGGACGCATCCATT 59.634 45.455 0.00 0.00 46.67 3.16
1253 1258 7.664731 CAGAGTGCATCCATCCTATTAGAAAAT 59.335 37.037 0.00 0.00 0.00 1.82
1257 1262 5.397360 TCAGAGTGCATCCATCCTATTAGA 58.603 41.667 0.00 0.00 0.00 2.10
1293 1298 9.569122 ACTAATAATTACGGGTGCATTCTATTT 57.431 29.630 0.00 0.00 0.00 1.40
1360 1365 0.178984 TGACTGACCGTACTCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
1444 1449 0.603707 CATCGCACGATTAGGCCCAT 60.604 55.000 0.00 0.00 31.62 4.00
1461 1466 3.388024 AGCGTACACAGATCCAATACCAT 59.612 43.478 0.00 0.00 0.00 3.55
1486 1491 7.038799 ACAAGAATTTCTTTAAGCACATCCCAT 60.039 33.333 8.95 0.00 33.78 4.00
1491 1496 9.768662 ATCAAACAAGAATTTCTTTAAGCACAT 57.231 25.926 8.95 0.00 33.78 3.21
1589 4439 8.208903 AGTGTTAGACTTTAGCCAGTAAAAAGA 58.791 33.333 1.37 0.00 34.90 2.52
1599 4449 6.071503 TGGAGAAGTAGTGTTAGACTTTAGCC 60.072 42.308 0.00 0.00 36.04 3.93
1607 4457 4.994282 TGAGGTGGAGAAGTAGTGTTAGA 58.006 43.478 0.00 0.00 0.00 2.10
1639 4489 7.553044 GGAGAAAGAGTATTAGGCTTTAGCAAA 59.447 37.037 3.88 0.00 44.36 3.68
1641 4491 6.156256 TGGAGAAAGAGTATTAGGCTTTAGCA 59.844 38.462 3.88 0.00 44.36 3.49
1652 4502 3.198853 GGCTGAGGTGGAGAAAGAGTATT 59.801 47.826 0.00 0.00 0.00 1.89
1666 4516 1.073199 CGGTCCAAAAGGCTGAGGT 59.927 57.895 0.00 0.00 0.00 3.85
1685 4535 7.740805 AGCTAAATACTATGCTAGGCTTTCTT 58.259 34.615 0.00 0.00 33.64 2.52
1692 4542 8.994170 GGAAAAAGAGCTAAATACTATGCTAGG 58.006 37.037 0.00 0.00 35.76 3.02
1701 4551 6.305638 CGTTGCTTGGAAAAAGAGCTAAATAC 59.694 38.462 0.00 0.00 37.32 1.89
1702 4552 6.378582 CGTTGCTTGGAAAAAGAGCTAAATA 58.621 36.000 0.00 0.00 37.32 1.40
1703 4553 5.222631 CGTTGCTTGGAAAAAGAGCTAAAT 58.777 37.500 0.00 0.00 37.32 1.40
1704 4554 4.499019 CCGTTGCTTGGAAAAAGAGCTAAA 60.499 41.667 0.00 0.00 37.32 1.85
1705 4555 3.004315 CCGTTGCTTGGAAAAAGAGCTAA 59.996 43.478 0.00 0.00 37.32 3.09
1706 4556 2.552315 CCGTTGCTTGGAAAAAGAGCTA 59.448 45.455 0.00 0.00 37.32 3.32
1707 4557 1.338020 CCGTTGCTTGGAAAAAGAGCT 59.662 47.619 0.00 0.00 37.32 4.09
1708 4558 1.770957 CCGTTGCTTGGAAAAAGAGC 58.229 50.000 0.00 0.00 36.95 4.09
1709 4559 1.066908 TGCCGTTGCTTGGAAAAAGAG 59.933 47.619 0.00 0.00 38.71 2.85
1710 4560 1.066908 CTGCCGTTGCTTGGAAAAAGA 59.933 47.619 0.00 0.00 38.71 2.52
1711 4561 1.490621 CTGCCGTTGCTTGGAAAAAG 58.509 50.000 0.00 0.00 38.71 2.27
1712 4562 0.529555 GCTGCCGTTGCTTGGAAAAA 60.530 50.000 0.00 0.00 38.71 1.94
1713 4563 1.067250 GCTGCCGTTGCTTGGAAAA 59.933 52.632 0.00 0.00 38.71 2.29
1714 4564 1.795170 GAGCTGCCGTTGCTTGGAAA 61.795 55.000 0.00 0.00 41.30 3.13
1715 4565 2.203337 AGCTGCCGTTGCTTGGAA 60.203 55.556 0.00 0.00 37.52 3.53
1716 4566 2.669569 GAGCTGCCGTTGCTTGGA 60.670 61.111 0.00 0.00 41.30 3.53
1717 4567 2.979676 TGAGCTGCCGTTGCTTGG 60.980 61.111 0.00 0.00 41.30 3.61
1718 4568 2.253452 GTGAGCTGCCGTTGCTTG 59.747 61.111 0.00 0.00 41.30 4.01
1719 4569 2.980233 GGTGAGCTGCCGTTGCTT 60.980 61.111 0.00 0.00 41.30 3.91
1720 4570 4.254709 TGGTGAGCTGCCGTTGCT 62.255 61.111 0.00 0.00 44.24 3.91
1721 4571 4.030452 GTGGTGAGCTGCCGTTGC 62.030 66.667 0.00 0.00 38.26 4.17
1722 4572 2.281070 AGTGGTGAGCTGCCGTTG 60.281 61.111 0.00 0.00 0.00 4.10
1723 4573 2.031163 GAGTGGTGAGCTGCCGTT 59.969 61.111 0.00 0.00 0.00 4.44
1724 4574 4.008933 GGAGTGGTGAGCTGCCGT 62.009 66.667 0.00 0.00 0.00 5.68
1725 4575 4.007644 TGGAGTGGTGAGCTGCCG 62.008 66.667 0.00 0.00 0.00 5.69
1726 4576 2.359230 GTGGAGTGGTGAGCTGCC 60.359 66.667 0.00 0.00 0.00 4.85
1727 4577 2.359230 GGTGGAGTGGTGAGCTGC 60.359 66.667 0.00 0.00 0.00 5.25
1728 4578 1.004080 CTGGTGGAGTGGTGAGCTG 60.004 63.158 0.00 0.00 0.00 4.24
1729 4579 2.888447 GCTGGTGGAGTGGTGAGCT 61.888 63.158 0.00 0.00 0.00 4.09
1730 4580 2.359230 GCTGGTGGAGTGGTGAGC 60.359 66.667 0.00 0.00 0.00 4.26
1731 4581 1.004080 CTGCTGGTGGAGTGGTGAG 60.004 63.158 0.00 0.00 0.00 3.51
1732 4582 3.150949 CTGCTGGTGGAGTGGTGA 58.849 61.111 0.00 0.00 0.00 4.02
1733 4583 2.670934 GCTGCTGGTGGAGTGGTG 60.671 66.667 0.00 0.00 33.91 4.17
1734 4584 3.170672 TGCTGCTGGTGGAGTGGT 61.171 61.111 0.00 0.00 33.91 4.16
1735 4585 2.359602 CTGCTGCTGGTGGAGTGG 60.360 66.667 0.00 0.00 33.91 4.00
1736 4586 3.054503 GCTGCTGCTGGTGGAGTG 61.055 66.667 8.53 0.00 33.91 3.51
1737 4587 4.341783 GGCTGCTGCTGGTGGAGT 62.342 66.667 15.64 0.00 39.59 3.85
1748 4598 4.892965 TTGGGTTGCACGGCTGCT 62.893 61.111 0.00 0.00 44.57 4.24
1749 4599 3.910490 TTTGGGTTGCACGGCTGC 61.910 61.111 0.00 0.00 44.52 5.25
1750 4600 2.027460 GTTTGGGTTGCACGGCTG 59.973 61.111 0.00 0.00 0.00 4.85
1751 4601 2.441164 TGTTTGGGTTGCACGGCT 60.441 55.556 0.00 0.00 0.00 5.52
1752 4602 2.027460 CTGTTTGGGTTGCACGGC 59.973 61.111 0.00 0.00 0.00 5.68
1753 4603 2.124693 ACCTGTTTGGGTTGCACGG 61.125 57.895 0.00 0.00 41.11 4.94
1754 4604 1.065600 CACCTGTTTGGGTTGCACG 59.934 57.895 0.00 0.00 41.11 5.34
1755 4605 0.534873 AACACCTGTTTGGGTTGCAC 59.465 50.000 0.00 0.00 41.11 4.57
1756 4606 0.534412 CAACACCTGTTTGGGTTGCA 59.466 50.000 0.00 0.00 38.86 4.08
1757 4607 3.360886 CAACACCTGTTTGGGTTGC 57.639 52.632 0.00 0.00 38.86 4.17
1758 4608 0.823460 AGCAACACCTGTTTGGGTTG 59.177 50.000 1.90 1.90 43.55 3.77
1759 4609 0.823460 CAGCAACACCTGTTTGGGTT 59.177 50.000 0.00 0.00 41.11 4.11
1760 4610 1.675720 GCAGCAACACCTGTTTGGGT 61.676 55.000 0.00 0.00 41.11 4.51
1761 4611 1.067916 GCAGCAACACCTGTTTGGG 59.932 57.895 0.00 0.00 41.11 4.12
1762 4612 0.249155 CAGCAGCAACACCTGTTTGG 60.249 55.000 0.00 0.00 42.93 3.28
1763 4613 0.249155 CCAGCAGCAACACCTGTTTG 60.249 55.000 0.00 0.00 35.83 2.93
1764 4614 0.395586 TCCAGCAGCAACACCTGTTT 60.396 50.000 0.00 0.00 35.83 2.83
1765 4615 0.178981 ATCCAGCAGCAACACCTGTT 60.179 50.000 0.00 0.00 39.12 3.16
1766 4616 0.892358 CATCCAGCAGCAACACCTGT 60.892 55.000 0.00 0.00 35.28 4.00
1767 4617 1.592400 CCATCCAGCAGCAACACCTG 61.592 60.000 0.00 0.00 35.93 4.00
1768 4618 1.303888 CCATCCAGCAGCAACACCT 60.304 57.895 0.00 0.00 0.00 4.00
1769 4619 2.998279 GCCATCCAGCAGCAACACC 61.998 63.158 0.00 0.00 0.00 4.16
1770 4620 2.570181 GCCATCCAGCAGCAACAC 59.430 61.111 0.00 0.00 0.00 3.32
1771 4621 2.677524 GGCCATCCAGCAGCAACA 60.678 61.111 0.00 0.00 0.00 3.33
1772 4622 3.455469 GGGCCATCCAGCAGCAAC 61.455 66.667 4.39 0.00 35.00 4.17
1773 4623 4.764771 GGGGCCATCCAGCAGCAA 62.765 66.667 4.39 0.00 37.22 3.91
1775 4625 4.764771 TTGGGGCCATCCAGCAGC 62.765 66.667 4.39 0.00 38.17 5.25
1776 4626 1.382146 AATTGGGGCCATCCAGCAG 60.382 57.895 4.39 0.00 38.17 4.24
1777 4627 1.381599 GAATTGGGGCCATCCAGCA 60.382 57.895 4.39 0.00 38.17 4.41
1778 4628 1.075748 AGAATTGGGGCCATCCAGC 60.076 57.895 4.39 0.00 38.17 4.85
1779 4629 0.468771 GGAGAATTGGGGCCATCCAG 60.469 60.000 4.39 0.00 38.17 3.86
1780 4630 0.925720 AGGAGAATTGGGGCCATCCA 60.926 55.000 4.39 0.00 37.22 3.41
1781 4631 0.262876 AAGGAGAATTGGGGCCATCC 59.737 55.000 4.39 0.00 0.00 3.51
1782 4632 1.063717 TGAAGGAGAATTGGGGCCATC 60.064 52.381 4.39 0.00 0.00 3.51
1783 4633 1.009997 TGAAGGAGAATTGGGGCCAT 58.990 50.000 4.39 0.00 0.00 4.40
1784 4634 1.009997 ATGAAGGAGAATTGGGGCCA 58.990 50.000 4.39 0.00 0.00 5.36
1785 4635 1.697284 GATGAAGGAGAATTGGGGCC 58.303 55.000 0.00 0.00 0.00 5.80
1786 4636 1.312815 CGATGAAGGAGAATTGGGGC 58.687 55.000 0.00 0.00 0.00 5.80
1787 4637 1.312815 GCGATGAAGGAGAATTGGGG 58.687 55.000 0.00 0.00 0.00 4.96
1788 4638 1.312815 GGCGATGAAGGAGAATTGGG 58.687 55.000 0.00 0.00 0.00 4.12
1789 4639 1.672881 GTGGCGATGAAGGAGAATTGG 59.327 52.381 0.00 0.00 0.00 3.16
1790 4640 2.636830 AGTGGCGATGAAGGAGAATTG 58.363 47.619 0.00 0.00 0.00 2.32
1791 4641 3.356529 AAGTGGCGATGAAGGAGAATT 57.643 42.857 0.00 0.00 0.00 2.17
1792 4642 3.356529 AAAGTGGCGATGAAGGAGAAT 57.643 42.857 0.00 0.00 0.00 2.40
1793 4643 2.859165 AAAGTGGCGATGAAGGAGAA 57.141 45.000 0.00 0.00 0.00 2.87
1794 4644 2.813754 CAAAAAGTGGCGATGAAGGAGA 59.186 45.455 0.00 0.00 0.00 3.71
1795 4645 2.813754 TCAAAAAGTGGCGATGAAGGAG 59.186 45.455 0.00 0.00 0.00 3.69
1796 4646 2.857483 TCAAAAAGTGGCGATGAAGGA 58.143 42.857 0.00 0.00 0.00 3.36
1797 4647 3.428045 GGATCAAAAAGTGGCGATGAAGG 60.428 47.826 0.00 0.00 0.00 3.46
1798 4648 3.428045 GGGATCAAAAAGTGGCGATGAAG 60.428 47.826 0.00 0.00 0.00 3.02
1799 4649 2.491693 GGGATCAAAAAGTGGCGATGAA 59.508 45.455 0.00 0.00 0.00 2.57
1800 4650 2.091541 GGGATCAAAAAGTGGCGATGA 58.908 47.619 0.00 0.00 0.00 2.92
1801 4651 1.818060 TGGGATCAAAAAGTGGCGATG 59.182 47.619 0.00 0.00 0.00 3.84
1802 4652 2.094675 CTGGGATCAAAAAGTGGCGAT 58.905 47.619 0.00 0.00 0.00 4.58
1803 4653 1.533625 CTGGGATCAAAAAGTGGCGA 58.466 50.000 0.00 0.00 0.00 5.54
1804 4654 0.109132 GCTGGGATCAAAAAGTGGCG 60.109 55.000 0.00 0.00 0.00 5.69
1805 4655 0.247460 GGCTGGGATCAAAAAGTGGC 59.753 55.000 0.00 0.00 0.00 5.01
1806 4656 1.631405 TGGCTGGGATCAAAAAGTGG 58.369 50.000 0.00 0.00 0.00 4.00
1807 4657 2.289010 GGTTGGCTGGGATCAAAAAGTG 60.289 50.000 0.00 0.00 0.00 3.16
1808 4658 1.970640 GGTTGGCTGGGATCAAAAAGT 59.029 47.619 0.00 0.00 0.00 2.66
1809 4659 1.969923 TGGTTGGCTGGGATCAAAAAG 59.030 47.619 0.00 0.00 0.00 2.27
1810 4660 2.094100 TGGTTGGCTGGGATCAAAAA 57.906 45.000 0.00 0.00 0.00 1.94
1811 4661 1.969923 CTTGGTTGGCTGGGATCAAAA 59.030 47.619 0.00 0.00 0.00 2.44
1812 4662 1.146774 TCTTGGTTGGCTGGGATCAAA 59.853 47.619 0.00 0.00 0.00 2.69
1813 4663 0.776810 TCTTGGTTGGCTGGGATCAA 59.223 50.000 0.00 0.00 0.00 2.57
1814 4664 0.038166 GTCTTGGTTGGCTGGGATCA 59.962 55.000 0.00 0.00 0.00 2.92
1815 4665 0.329596 AGTCTTGGTTGGCTGGGATC 59.670 55.000 0.00 0.00 0.00 3.36
1816 4666 0.329596 GAGTCTTGGTTGGCTGGGAT 59.670 55.000 0.00 0.00 0.00 3.85
1817 4667 1.059584 TGAGTCTTGGTTGGCTGGGA 61.060 55.000 0.00 0.00 0.00 4.37
1818 4668 0.038744 ATGAGTCTTGGTTGGCTGGG 59.961 55.000 0.00 0.00 0.00 4.45
1819 4669 2.026822 ACTATGAGTCTTGGTTGGCTGG 60.027 50.000 0.00 0.00 0.00 4.85
1820 4670 3.340814 ACTATGAGTCTTGGTTGGCTG 57.659 47.619 0.00 0.00 0.00 4.85
1821 4671 3.679389 CAACTATGAGTCTTGGTTGGCT 58.321 45.455 20.87 0.00 35.18 4.75
1822 4672 2.162408 GCAACTATGAGTCTTGGTTGGC 59.838 50.000 26.16 18.31 38.05 4.52
1823 4673 2.749621 GGCAACTATGAGTCTTGGTTGG 59.250 50.000 26.16 14.36 38.05 3.77
1824 4674 3.411446 TGGCAACTATGAGTCTTGGTTG 58.589 45.455 23.03 23.03 39.83 3.77
1825 4675 3.788227 TGGCAACTATGAGTCTTGGTT 57.212 42.857 2.38 2.38 37.61 3.67
1826 4676 3.009473 ACATGGCAACTATGAGTCTTGGT 59.991 43.478 0.00 0.00 37.61 3.67
1827 4677 3.614092 ACATGGCAACTATGAGTCTTGG 58.386 45.455 0.00 0.00 37.61 3.61
1828 4678 5.392380 GGAAACATGGCAACTATGAGTCTTG 60.392 44.000 0.00 0.00 37.61 3.02
1829 4679 4.702131 GGAAACATGGCAACTATGAGTCTT 59.298 41.667 0.00 0.00 37.61 3.01
1830 4680 4.265073 GGAAACATGGCAACTATGAGTCT 58.735 43.478 0.00 0.00 37.61 3.24
1831 4681 3.063997 CGGAAACATGGCAACTATGAGTC 59.936 47.826 0.00 0.00 37.61 3.36
1832 4682 3.009723 CGGAAACATGGCAACTATGAGT 58.990 45.455 0.00 0.00 37.61 3.41
1833 4683 2.355756 CCGGAAACATGGCAACTATGAG 59.644 50.000 0.00 0.00 37.61 2.90
1834 4684 2.290641 ACCGGAAACATGGCAACTATGA 60.291 45.455 9.46 0.00 37.61 2.15
1835 4685 2.091541 ACCGGAAACATGGCAACTATG 58.908 47.619 9.46 0.00 37.61 2.23
1836 4686 2.507407 ACCGGAAACATGGCAACTAT 57.493 45.000 9.46 0.00 37.61 2.12
1837 4687 3.055021 TCATACCGGAAACATGGCAACTA 60.055 43.478 9.46 0.00 37.61 2.24
1838 4688 2.091541 CATACCGGAAACATGGCAACT 58.908 47.619 9.46 0.00 37.61 3.16
1839 4689 2.088423 TCATACCGGAAACATGGCAAC 58.912 47.619 9.46 0.00 0.00 4.17
1840 4690 2.498644 TCATACCGGAAACATGGCAA 57.501 45.000 9.46 0.00 0.00 4.52
1841 4691 2.296792 CATCATACCGGAAACATGGCA 58.703 47.619 9.46 0.00 0.00 4.92
1842 4692 1.608590 CCATCATACCGGAAACATGGC 59.391 52.381 9.46 0.00 0.00 4.40
1843 4693 2.158682 TCCCATCATACCGGAAACATGG 60.159 50.000 9.46 13.95 0.00 3.66
1844 4694 3.207265 TCCCATCATACCGGAAACATG 57.793 47.619 9.46 6.10 0.00 3.21
1845 4695 3.551846 GTTCCCATCATACCGGAAACAT 58.448 45.455 9.46 0.00 37.41 2.71
1846 4696 2.678479 CGTTCCCATCATACCGGAAACA 60.678 50.000 9.46 0.00 37.41 2.83
1847 4697 1.937899 CGTTCCCATCATACCGGAAAC 59.062 52.381 9.46 0.00 37.41 2.78
1848 4698 1.832366 TCGTTCCCATCATACCGGAAA 59.168 47.619 9.46 0.00 37.41 3.13
1849 4699 1.411246 CTCGTTCCCATCATACCGGAA 59.589 52.381 9.46 0.00 33.24 4.30
1850 4700 1.037493 CTCGTTCCCATCATACCGGA 58.963 55.000 9.46 0.00 0.00 5.14
1851 4701 0.033504 CCTCGTTCCCATCATACCGG 59.966 60.000 0.00 0.00 0.00 5.28
1852 4702 1.037493 TCCTCGTTCCCATCATACCG 58.963 55.000 0.00 0.00 0.00 4.02
1853 4703 2.802057 CGTTCCTCGTTCCCATCATACC 60.802 54.545 0.00 0.00 34.52 2.73
1854 4704 2.470821 CGTTCCTCGTTCCCATCATAC 58.529 52.381 0.00 0.00 34.52 2.39
1855 4705 1.411246 CCGTTCCTCGTTCCCATCATA 59.589 52.381 0.00 0.00 37.94 2.15
1856 4706 0.178068 CCGTTCCTCGTTCCCATCAT 59.822 55.000 0.00 0.00 37.94 2.45
1857 4707 1.594833 CCGTTCCTCGTTCCCATCA 59.405 57.895 0.00 0.00 37.94 3.07
1858 4708 1.153429 CCCGTTCCTCGTTCCCATC 60.153 63.158 0.00 0.00 37.94 3.51
1859 4709 1.196104 TTCCCGTTCCTCGTTCCCAT 61.196 55.000 0.00 0.00 37.94 4.00
1860 4710 1.196104 ATTCCCGTTCCTCGTTCCCA 61.196 55.000 0.00 0.00 37.94 4.37
1861 4711 0.743345 CATTCCCGTTCCTCGTTCCC 60.743 60.000 0.00 0.00 37.94 3.97
1862 4712 0.743345 CCATTCCCGTTCCTCGTTCC 60.743 60.000 0.00 0.00 37.94 3.62
1863 4713 0.248289 TCCATTCCCGTTCCTCGTTC 59.752 55.000 0.00 0.00 37.94 3.95
1864 4714 0.249398 CTCCATTCCCGTTCCTCGTT 59.751 55.000 0.00 0.00 37.94 3.85
1865 4715 1.614241 CCTCCATTCCCGTTCCTCGT 61.614 60.000 0.00 0.00 37.94 4.18
1866 4716 1.144057 CCTCCATTCCCGTTCCTCG 59.856 63.158 0.00 0.00 39.52 4.63
1867 4717 0.178301 GTCCTCCATTCCCGTTCCTC 59.822 60.000 0.00 0.00 0.00 3.71
1868 4718 1.614241 CGTCCTCCATTCCCGTTCCT 61.614 60.000 0.00 0.00 0.00 3.36
1869 4719 1.153429 CGTCCTCCATTCCCGTTCC 60.153 63.158 0.00 0.00 0.00 3.62
1870 4720 0.179108 CTCGTCCTCCATTCCCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
1871 4721 0.613853 TCTCGTCCTCCATTCCCGTT 60.614 55.000 0.00 0.00 0.00 4.44
1872 4722 1.000019 TCTCGTCCTCCATTCCCGT 60.000 57.895 0.00 0.00 0.00 5.28
1873 4723 1.038130 ACTCTCGTCCTCCATTCCCG 61.038 60.000 0.00 0.00 0.00 5.14
1874 4724 0.747852 GACTCTCGTCCTCCATTCCC 59.252 60.000 0.00 0.00 33.98 3.97
1875 4725 0.382515 CGACTCTCGTCCTCCATTCC 59.617 60.000 0.00 0.00 36.82 3.01
1876 4726 0.382515 CCGACTCTCGTCCTCCATTC 59.617 60.000 0.00 0.00 38.40 2.67
1877 4727 0.034380 TCCGACTCTCGTCCTCCATT 60.034 55.000 0.00 0.00 38.40 3.16
1878 4728 0.464735 CTCCGACTCTCGTCCTCCAT 60.465 60.000 0.00 0.00 38.40 3.41
1879 4729 1.078356 CTCCGACTCTCGTCCTCCA 60.078 63.158 0.00 0.00 38.40 3.86
1880 4730 1.820481 CCTCCGACTCTCGTCCTCC 60.820 68.421 0.00 0.00 38.40 4.30
1881 4731 2.474612 GCCTCCGACTCTCGTCCTC 61.475 68.421 0.00 0.00 38.40 3.71
1882 4732 2.438795 GCCTCCGACTCTCGTCCT 60.439 66.667 0.00 0.00 38.40 3.85
1883 4733 2.438795 AGCCTCCGACTCTCGTCC 60.439 66.667 0.00 0.00 38.40 4.79
1884 4734 2.766400 CCAGCCTCCGACTCTCGTC 61.766 68.421 0.00 0.00 38.40 4.20
1885 4735 2.752238 CCAGCCTCCGACTCTCGT 60.752 66.667 0.00 0.00 38.40 4.18
1886 4736 1.595993 TTTCCAGCCTCCGACTCTCG 61.596 60.000 0.00 0.00 40.07 4.04
1887 4737 0.608640 TTTTCCAGCCTCCGACTCTC 59.391 55.000 0.00 0.00 0.00 3.20
1888 4738 1.056660 TTTTTCCAGCCTCCGACTCT 58.943 50.000 0.00 0.00 0.00 3.24
1889 4739 3.625745 TTTTTCCAGCCTCCGACTC 57.374 52.632 0.00 0.00 0.00 3.36
1904 4754 7.227156 CCCTGCTGTATCTGTATCCTATTTTT 58.773 38.462 0.00 0.00 0.00 1.94
1905 4755 6.240002 CCCCTGCTGTATCTGTATCCTATTTT 60.240 42.308 0.00 0.00 0.00 1.82
1906 4756 5.249393 CCCCTGCTGTATCTGTATCCTATTT 59.751 44.000 0.00 0.00 0.00 1.40
1907 4757 4.780021 CCCCTGCTGTATCTGTATCCTATT 59.220 45.833 0.00 0.00 0.00 1.73
1908 4758 4.202836 ACCCCTGCTGTATCTGTATCCTAT 60.203 45.833 0.00 0.00 0.00 2.57
1909 4759 3.142217 ACCCCTGCTGTATCTGTATCCTA 59.858 47.826 0.00 0.00 0.00 2.94
1910 4760 2.090494 ACCCCTGCTGTATCTGTATCCT 60.090 50.000 0.00 0.00 0.00 3.24
1911 4761 2.330216 ACCCCTGCTGTATCTGTATCC 58.670 52.381 0.00 0.00 0.00 2.59
1912 4762 5.715279 TGTATACCCCTGCTGTATCTGTATC 59.285 44.000 0.00 0.00 31.60 2.24
1913 4763 5.651303 TGTATACCCCTGCTGTATCTGTAT 58.349 41.667 0.00 0.00 31.60 2.29
1914 4764 5.069518 TGTATACCCCTGCTGTATCTGTA 57.930 43.478 0.00 0.00 31.60 2.74
1915 4765 3.923648 TGTATACCCCTGCTGTATCTGT 58.076 45.455 0.00 0.00 31.60 3.41
1916 4766 4.774726 AGATGTATACCCCTGCTGTATCTG 59.225 45.833 0.00 0.00 31.60 2.90
1917 4767 5.017093 AGATGTATACCCCTGCTGTATCT 57.983 43.478 0.00 0.00 31.60 1.98
1918 4768 5.020132 AGAGATGTATACCCCTGCTGTATC 58.980 45.833 0.00 0.00 31.60 2.24
1919 4769 5.017093 AGAGATGTATACCCCTGCTGTAT 57.983 43.478 0.00 0.00 33.63 2.29
1920 4770 4.471078 AGAGATGTATACCCCTGCTGTA 57.529 45.455 0.00 0.00 0.00 2.74
1921 4771 3.336509 AGAGATGTATACCCCTGCTGT 57.663 47.619 0.00 0.00 0.00 4.40
1922 4772 4.667573 TCTAGAGATGTATACCCCTGCTG 58.332 47.826 0.00 0.00 0.00 4.41
1923 4773 5.081032 GTTCTAGAGATGTATACCCCTGCT 58.919 45.833 0.00 1.11 0.00 4.24
1924 4774 4.082679 CGTTCTAGAGATGTATACCCCTGC 60.083 50.000 0.00 0.00 0.00 4.85
1925 4775 5.314529 TCGTTCTAGAGATGTATACCCCTG 58.685 45.833 0.00 0.00 0.00 4.45
1926 4776 5.579753 TCGTTCTAGAGATGTATACCCCT 57.420 43.478 0.00 0.00 0.00 4.79
1927 4777 6.181908 AGATCGTTCTAGAGATGTATACCCC 58.818 44.000 0.00 0.00 0.00 4.95
1928 4778 7.690952 AAGATCGTTCTAGAGATGTATACCC 57.309 40.000 0.00 0.00 0.00 3.69
1929 4779 9.005777 AGAAAGATCGTTCTAGAGATGTATACC 57.994 37.037 20.49 0.00 36.06 2.73
1934 4784 7.918562 GCTTTAGAAAGATCGTTCTAGAGATGT 59.081 37.037 33.47 13.78 41.53 3.06
1935 4785 7.918033 TGCTTTAGAAAGATCGTTCTAGAGATG 59.082 37.037 33.47 21.28 41.53 2.90
1936 4786 8.001881 TGCTTTAGAAAGATCGTTCTAGAGAT 57.998 34.615 33.47 14.87 41.53 2.75
1937 4787 7.337184 TCTGCTTTAGAAAGATCGTTCTAGAGA 59.663 37.037 33.47 25.10 41.53 3.10
1938 4788 7.476667 TCTGCTTTAGAAAGATCGTTCTAGAG 58.523 38.462 28.96 28.96 41.74 2.43
1939 4789 7.392494 TCTGCTTTAGAAAGATCGTTCTAGA 57.608 36.000 24.04 20.41 40.35 2.43
1952 4802 3.743911 TGAATCGCGTTTCTGCTTTAGAA 59.256 39.130 25.45 4.50 43.53 2.10
1953 4803 3.322369 TGAATCGCGTTTCTGCTTTAGA 58.678 40.909 25.45 5.13 0.00 2.10
1954 4804 3.722555 TGAATCGCGTTTCTGCTTTAG 57.277 42.857 25.45 0.00 0.00 1.85
1955 4805 4.153296 TGATTGAATCGCGTTTCTGCTTTA 59.847 37.500 25.45 6.41 0.00 1.85
1956 4806 3.058293 TGATTGAATCGCGTTTCTGCTTT 60.058 39.130 25.45 9.79 0.00 3.51
1957 4807 2.483877 TGATTGAATCGCGTTTCTGCTT 59.516 40.909 25.45 11.23 0.00 3.91
1958 4808 2.076100 TGATTGAATCGCGTTTCTGCT 58.924 42.857 25.45 13.13 0.00 4.24
1959 4809 2.525750 TGATTGAATCGCGTTTCTGC 57.474 45.000 25.45 16.55 0.00 4.26
1960 4810 4.496895 GGAATTGATTGAATCGCGTTTCTG 59.503 41.667 25.45 0.00 0.00 3.02
1961 4811 4.662145 GGAATTGATTGAATCGCGTTTCT 58.338 39.130 25.45 10.66 0.00 2.52
1962 4812 3.478516 CGGAATTGATTGAATCGCGTTTC 59.521 43.478 20.33 20.33 0.00 2.78
1963 4813 3.425404 CGGAATTGATTGAATCGCGTTT 58.575 40.909 5.77 3.34 0.00 3.60
1964 4814 2.223249 CCGGAATTGATTGAATCGCGTT 60.223 45.455 5.77 0.00 0.00 4.84
1965 4815 1.330521 CCGGAATTGATTGAATCGCGT 59.669 47.619 5.77 0.00 0.00 6.01
1966 4816 1.330521 ACCGGAATTGATTGAATCGCG 59.669 47.619 9.46 0.00 0.00 5.87
1967 4817 3.603857 CGTACCGGAATTGATTGAATCGC 60.604 47.826 9.46 0.00 0.00 4.58
1968 4818 3.799963 TCGTACCGGAATTGATTGAATCG 59.200 43.478 9.46 0.00 0.00 3.34
1969 4819 5.924475 ATCGTACCGGAATTGATTGAATC 57.076 39.130 9.46 0.00 0.00 2.52
1970 4820 7.795482 TTTATCGTACCGGAATTGATTGAAT 57.205 32.000 9.46 0.00 0.00 2.57
1971 4821 7.041644 GGATTTATCGTACCGGAATTGATTGAA 60.042 37.037 9.46 5.31 0.00 2.69
1972 4822 6.425721 GGATTTATCGTACCGGAATTGATTGA 59.574 38.462 9.46 0.00 0.00 2.57
1973 4823 6.599437 GGATTTATCGTACCGGAATTGATTG 58.401 40.000 9.46 0.00 0.00 2.67
1974 4824 5.407387 CGGATTTATCGTACCGGAATTGATT 59.593 40.000 9.46 0.00 41.41 2.57
1975 4825 4.927425 CGGATTTATCGTACCGGAATTGAT 59.073 41.667 9.46 8.46 41.41 2.57
1976 4826 4.300803 CGGATTTATCGTACCGGAATTGA 58.699 43.478 9.46 0.00 41.41 2.57
1977 4827 4.640805 CGGATTTATCGTACCGGAATTG 57.359 45.455 9.46 0.00 41.41 2.32
1983 4833 6.912591 GGTATTATACCGGATTTATCGTACCG 59.087 42.308 9.46 0.00 44.16 4.02
1999 4849 8.932791 CACGTTCCTTATTCCATGGTATTATAC 58.067 37.037 12.58 0.00 0.00 1.47
2000 4850 8.872134 TCACGTTCCTTATTCCATGGTATTATA 58.128 33.333 12.58 3.38 0.00 0.98
2001 4851 7.741785 TCACGTTCCTTATTCCATGGTATTAT 58.258 34.615 12.58 4.33 0.00 1.28
2002 4852 7.127012 TCACGTTCCTTATTCCATGGTATTA 57.873 36.000 12.58 0.22 0.00 0.98
2003 4853 5.996644 TCACGTTCCTTATTCCATGGTATT 58.003 37.500 12.58 0.19 0.00 1.89
2004 4854 5.623956 TCACGTTCCTTATTCCATGGTAT 57.376 39.130 12.58 10.65 0.00 2.73
2005 4855 5.423704 TTCACGTTCCTTATTCCATGGTA 57.576 39.130 12.58 1.50 0.00 3.25
2006 4856 3.992943 TCACGTTCCTTATTCCATGGT 57.007 42.857 12.58 0.00 0.00 3.55
2007 4857 7.510549 AATATTCACGTTCCTTATTCCATGG 57.489 36.000 4.97 4.97 0.00 3.66
2008 4858 9.878599 GTAAATATTCACGTTCCTTATTCCATG 57.121 33.333 0.00 0.00 0.00 3.66
2009 4859 8.770828 CGTAAATATTCACGTTCCTTATTCCAT 58.229 33.333 2.79 0.00 33.56 3.41
2010 4860 7.225145 CCGTAAATATTCACGTTCCTTATTCCA 59.775 37.037 10.18 0.00 36.44 3.53
2011 4861 7.439056 TCCGTAAATATTCACGTTCCTTATTCC 59.561 37.037 10.18 0.00 36.44 3.01
2012 4862 8.356533 TCCGTAAATATTCACGTTCCTTATTC 57.643 34.615 10.18 0.00 36.44 1.75
2013 4863 8.770828 CATCCGTAAATATTCACGTTCCTTATT 58.229 33.333 10.18 0.00 36.44 1.40
2014 4864 7.095355 GCATCCGTAAATATTCACGTTCCTTAT 60.095 37.037 10.18 0.00 36.44 1.73
2015 4865 6.201425 GCATCCGTAAATATTCACGTTCCTTA 59.799 38.462 10.18 0.00 36.44 2.69
2016 4866 5.007332 GCATCCGTAAATATTCACGTTCCTT 59.993 40.000 10.18 0.00 36.44 3.36
2017 4867 4.510340 GCATCCGTAAATATTCACGTTCCT 59.490 41.667 10.18 0.00 36.44 3.36
2018 4868 4.607557 CGCATCCGTAAATATTCACGTTCC 60.608 45.833 10.18 0.00 36.44 3.62
2019 4869 4.442705 CGCATCCGTAAATATTCACGTTC 58.557 43.478 10.18 0.00 36.44 3.95
2020 4870 3.246699 CCGCATCCGTAAATATTCACGTT 59.753 43.478 10.18 0.00 36.44 3.99
2021 4871 2.798283 CCGCATCCGTAAATATTCACGT 59.202 45.455 10.18 0.00 36.44 4.49
2022 4872 2.156891 CCCGCATCCGTAAATATTCACG 59.843 50.000 4.03 4.03 37.89 4.35
2023 4873 2.482721 CCCCGCATCCGTAAATATTCAC 59.517 50.000 0.00 0.00 0.00 3.18
2024 4874 2.369203 TCCCCGCATCCGTAAATATTCA 59.631 45.455 0.00 0.00 0.00 2.57
2025 4875 3.000727 CTCCCCGCATCCGTAAATATTC 58.999 50.000 0.00 0.00 0.00 1.75
2026 4876 2.874457 GCTCCCCGCATCCGTAAATATT 60.874 50.000 0.00 0.00 38.92 1.28
2027 4877 1.338769 GCTCCCCGCATCCGTAAATAT 60.339 52.381 0.00 0.00 38.92 1.28
2028 4878 0.034337 GCTCCCCGCATCCGTAAATA 59.966 55.000 0.00 0.00 38.92 1.40
2029 4879 1.227853 GCTCCCCGCATCCGTAAAT 60.228 57.895 0.00 0.00 38.92 1.40
2030 4880 2.188469 GCTCCCCGCATCCGTAAA 59.812 61.111 0.00 0.00 38.92 2.01
2031 4881 3.078196 TGCTCCCCGCATCCGTAA 61.078 61.111 0.00 0.00 45.47 3.18
2046 4896 3.650950 TCCCTCCCAGCCAGTTGC 61.651 66.667 0.00 0.00 41.71 4.17
2047 4897 2.352805 GTCCCTCCCAGCCAGTTG 59.647 66.667 0.00 0.00 0.00 3.16
2048 4898 2.936032 GGTCCCTCCCAGCCAGTT 60.936 66.667 0.00 0.00 0.00 3.16
2054 4904 4.075793 TCCCTCGGTCCCTCCCAG 62.076 72.222 0.00 0.00 0.00 4.45
2055 4905 4.075793 CTCCCTCGGTCCCTCCCA 62.076 72.222 0.00 0.00 0.00 4.37
2056 4906 2.698075 TACTCCCTCGGTCCCTCCC 61.698 68.421 0.00 0.00 0.00 4.30
2057 4907 1.455402 GTACTCCCTCGGTCCCTCC 60.455 68.421 0.00 0.00 0.00 4.30
2058 4908 0.033306 AAGTACTCCCTCGGTCCCTC 60.033 60.000 0.00 0.00 0.00 4.30
2059 4909 1.302907 TAAGTACTCCCTCGGTCCCT 58.697 55.000 0.00 0.00 0.00 4.20
2060 4910 2.378378 ATAAGTACTCCCTCGGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
2061 4911 3.819902 CTGTATAAGTACTCCCTCGGTCC 59.180 52.174 0.00 0.00 0.00 4.46
2062 4912 3.819902 CCTGTATAAGTACTCCCTCGGTC 59.180 52.174 0.00 0.00 0.00 4.79
2063 4913 3.436180 CCCTGTATAAGTACTCCCTCGGT 60.436 52.174 0.00 0.00 0.00 4.69
2064 4914 3.155501 CCCTGTATAAGTACTCCCTCGG 58.844 54.545 0.00 0.00 0.00 4.63
2065 4915 4.096190 TCCCTGTATAAGTACTCCCTCG 57.904 50.000 0.00 0.00 0.00 4.63
2066 4916 5.302313 CAGTTCCCTGTATAAGTACTCCCTC 59.698 48.000 0.00 0.00 33.80 4.30
2067 4917 5.209659 CAGTTCCCTGTATAAGTACTCCCT 58.790 45.833 0.00 0.00 33.80 4.20
2068 4918 4.202233 GCAGTTCCCTGTATAAGTACTCCC 60.202 50.000 0.00 0.00 41.02 4.30
2069 4919 4.650131 AGCAGTTCCCTGTATAAGTACTCC 59.350 45.833 0.00 0.00 41.02 3.85
2070 4920 5.452077 CCAGCAGTTCCCTGTATAAGTACTC 60.452 48.000 0.00 0.00 41.02 2.59
2071 4921 4.406003 CCAGCAGTTCCCTGTATAAGTACT 59.594 45.833 0.00 0.00 41.02 2.73
2072 4922 4.443034 CCCAGCAGTTCCCTGTATAAGTAC 60.443 50.000 0.00 0.00 41.02 2.73
2073 4923 3.709653 CCCAGCAGTTCCCTGTATAAGTA 59.290 47.826 0.00 0.00 41.02 2.24
2074 4924 2.505819 CCCAGCAGTTCCCTGTATAAGT 59.494 50.000 0.00 0.00 41.02 2.24
2075 4925 2.746472 GCCCAGCAGTTCCCTGTATAAG 60.746 54.545 0.00 0.00 41.02 1.73
2076 4926 1.211949 GCCCAGCAGTTCCCTGTATAA 59.788 52.381 0.00 0.00 41.02 0.98
2077 4927 0.837272 GCCCAGCAGTTCCCTGTATA 59.163 55.000 0.00 0.00 41.02 1.47
2078 4928 0.916358 AGCCCAGCAGTTCCCTGTAT 60.916 55.000 0.00 0.00 41.02 2.29
2079 4929 1.538876 AGCCCAGCAGTTCCCTGTA 60.539 57.895 0.00 0.00 41.02 2.74
2080 4930 2.856000 AGCCCAGCAGTTCCCTGT 60.856 61.111 0.00 0.00 41.02 4.00
2081 4931 2.360852 CAGCCCAGCAGTTCCCTG 60.361 66.667 0.00 0.00 41.91 4.45
2082 4932 3.655211 CCAGCCCAGCAGTTCCCT 61.655 66.667 0.00 0.00 0.00 4.20
2083 4933 4.748144 CCCAGCCCAGCAGTTCCC 62.748 72.222 0.00 0.00 0.00 3.97
2084 4934 3.635268 CTCCCAGCCCAGCAGTTCC 62.635 68.421 0.00 0.00 0.00 3.62
2085 4935 2.045536 CTCCCAGCCCAGCAGTTC 60.046 66.667 0.00 0.00 0.00 3.01
2086 4936 4.357279 GCTCCCAGCCCAGCAGTT 62.357 66.667 0.00 0.00 34.48 3.16
2088 4938 4.355720 TTGCTCCCAGCCCAGCAG 62.356 66.667 0.00 0.00 46.18 4.24
2089 4939 4.666253 GTTGCTCCCAGCCCAGCA 62.666 66.667 0.00 0.00 44.02 4.41
2090 4940 4.357279 AGTTGCTCCCAGCCCAGC 62.357 66.667 0.00 0.00 41.51 4.85
2091 4941 2.360852 CAGTTGCTCCCAGCCCAG 60.361 66.667 0.00 0.00 41.51 4.45
2092 4942 3.970410 CCAGTTGCTCCCAGCCCA 61.970 66.667 0.00 0.00 41.51 5.36
2093 4943 3.513750 AACCAGTTGCTCCCAGCCC 62.514 63.158 0.00 0.00 41.51 5.19
2094 4944 2.116125 AACCAGTTGCTCCCAGCC 59.884 61.111 0.00 0.00 41.51 4.85
2095 4945 3.359002 CAACCAGTTGCTCCCAGC 58.641 61.111 0.00 0.00 42.82 4.85
2103 4953 1.061131 GATCGACGATGCAACCAGTTG 59.939 52.381 16.49 6.15 43.14 3.16
2104 4954 1.359848 GATCGACGATGCAACCAGTT 58.640 50.000 16.49 0.00 0.00 3.16
2105 4955 0.460284 GGATCGACGATGCAACCAGT 60.460 55.000 22.55 0.00 30.72 4.00
2106 4956 0.460109 TGGATCGACGATGCAACCAG 60.460 55.000 26.94 0.00 37.44 4.00
2107 4957 0.177836 ATGGATCGACGATGCAACCA 59.822 50.000 31.34 23.30 43.06 3.67
2108 4958 0.583438 CATGGATCGACGATGCAACC 59.417 55.000 31.34 18.85 43.06 3.77
2109 4959 1.570813 TCATGGATCGACGATGCAAC 58.429 50.000 31.34 10.54 43.06 4.17
2110 4960 2.159114 TCTTCATGGATCGACGATGCAA 60.159 45.455 31.34 16.49 43.06 4.08
2111 4961 1.408702 TCTTCATGGATCGACGATGCA 59.591 47.619 30.16 30.16 43.87 3.96
2112 4962 1.789464 GTCTTCATGGATCGACGATGC 59.211 52.381 21.00 21.00 35.25 3.91
2113 4963 3.361794 AGTCTTCATGGATCGACGATG 57.638 47.619 16.49 2.04 36.32 3.84
2114 4964 5.515797 TTTAGTCTTCATGGATCGACGAT 57.484 39.130 10.78 10.78 0.00 3.73
2115 4965 4.976224 TTTAGTCTTCATGGATCGACGA 57.024 40.909 0.00 0.00 0.00 4.20
2116 4966 7.694388 TTATTTTAGTCTTCATGGATCGACG 57.306 36.000 0.00 0.00 0.00 5.12
2118 4968 9.830975 TGATTTATTTTAGTCTTCATGGATCGA 57.169 29.630 0.00 0.00 0.00 3.59
2128 4978 9.634021 GGGAAGGAGATGATTTATTTTAGTCTT 57.366 33.333 0.00 0.00 0.00 3.01
2129 4979 8.781951 TGGGAAGGAGATGATTTATTTTAGTCT 58.218 33.333 0.00 0.00 0.00 3.24
2130 4980 8.980481 TGGGAAGGAGATGATTTATTTTAGTC 57.020 34.615 0.00 0.00 0.00 2.59
2131 4981 9.942526 ATTGGGAAGGAGATGATTTATTTTAGT 57.057 29.630 0.00 0.00 0.00 2.24
2133 4983 9.146586 CCATTGGGAAGGAGATGATTTATTTTA 57.853 33.333 0.00 0.00 35.59 1.52
2134 4984 7.845800 TCCATTGGGAAGGAGATGATTTATTTT 59.154 33.333 2.09 0.00 41.32 1.82
2135 4985 7.364627 TCCATTGGGAAGGAGATGATTTATTT 58.635 34.615 2.09 0.00 41.32 1.40
2136 4986 6.925934 TCCATTGGGAAGGAGATGATTTATT 58.074 36.000 2.09 0.00 41.32 1.40
2137 4987 6.535161 TCCATTGGGAAGGAGATGATTTAT 57.465 37.500 2.09 0.00 41.32 1.40
2138 4988 5.992564 TCCATTGGGAAGGAGATGATTTA 57.007 39.130 2.09 0.00 41.32 1.40
2139 4989 4.886755 TCCATTGGGAAGGAGATGATTT 57.113 40.909 2.09 0.00 41.32 2.17
2151 5001 6.407979 GGCTGCTAATAAATTTTCCATTGGGA 60.408 38.462 2.09 0.00 43.03 4.37
2152 5002 5.759763 GGCTGCTAATAAATTTTCCATTGGG 59.240 40.000 2.09 0.00 0.00 4.12
2153 5003 6.585416 AGGCTGCTAATAAATTTTCCATTGG 58.415 36.000 0.00 0.00 0.00 3.16
2154 5004 7.011669 CCAAGGCTGCTAATAAATTTTCCATTG 59.988 37.037 0.00 0.00 0.00 2.82
2155 5005 7.049754 CCAAGGCTGCTAATAAATTTTCCATT 58.950 34.615 0.00 0.00 0.00 3.16
2156 5006 6.383726 TCCAAGGCTGCTAATAAATTTTCCAT 59.616 34.615 0.00 0.00 0.00 3.41
2157 5007 5.719085 TCCAAGGCTGCTAATAAATTTTCCA 59.281 36.000 0.00 0.00 0.00 3.53
2158 5008 6.127338 ACTCCAAGGCTGCTAATAAATTTTCC 60.127 38.462 0.00 0.00 0.00 3.13
2159 5009 6.867550 ACTCCAAGGCTGCTAATAAATTTTC 58.132 36.000 0.00 0.00 0.00 2.29
2160 5010 6.857437 ACTCCAAGGCTGCTAATAAATTTT 57.143 33.333 0.00 0.00 0.00 1.82
2161 5011 7.954666 TTACTCCAAGGCTGCTAATAAATTT 57.045 32.000 0.00 0.00 0.00 1.82
2162 5012 8.416329 CAATTACTCCAAGGCTGCTAATAAATT 58.584 33.333 0.00 0.00 0.00 1.82
2163 5013 7.014615 CCAATTACTCCAAGGCTGCTAATAAAT 59.985 37.037 0.00 0.00 0.00 1.40
2164 5014 6.321181 CCAATTACTCCAAGGCTGCTAATAAA 59.679 38.462 0.00 0.00 0.00 1.40
2165 5015 5.827797 CCAATTACTCCAAGGCTGCTAATAA 59.172 40.000 0.00 0.00 0.00 1.40
2166 5016 5.131977 TCCAATTACTCCAAGGCTGCTAATA 59.868 40.000 0.00 0.00 0.00 0.98
2167 5017 4.079787 TCCAATTACTCCAAGGCTGCTAAT 60.080 41.667 0.00 0.00 0.00 1.73
2168 5018 3.265737 TCCAATTACTCCAAGGCTGCTAA 59.734 43.478 0.00 0.00 0.00 3.09
2169 5019 2.843730 TCCAATTACTCCAAGGCTGCTA 59.156 45.455 0.00 0.00 0.00 3.49
2170 5020 1.635487 TCCAATTACTCCAAGGCTGCT 59.365 47.619 0.00 0.00 0.00 4.24
2171 5021 2.128771 TCCAATTACTCCAAGGCTGC 57.871 50.000 0.00 0.00 0.00 5.25
2172 5022 3.119352 GCTTTCCAATTACTCCAAGGCTG 60.119 47.826 0.00 0.00 0.00 4.85
2173 5023 3.092301 GCTTTCCAATTACTCCAAGGCT 58.908 45.455 0.00 0.00 0.00 4.58
2174 5024 2.825532 TGCTTTCCAATTACTCCAAGGC 59.174 45.455 0.00 0.00 0.00 4.35
2175 5025 4.335416 TCTGCTTTCCAATTACTCCAAGG 58.665 43.478 0.00 0.00 0.00 3.61
2176 5026 5.617751 CGTTCTGCTTTCCAATTACTCCAAG 60.618 44.000 0.00 0.00 0.00 3.61
2177 5027 4.215399 CGTTCTGCTTTCCAATTACTCCAA 59.785 41.667 0.00 0.00 0.00 3.53
2178 5028 3.751175 CGTTCTGCTTTCCAATTACTCCA 59.249 43.478 0.00 0.00 0.00 3.86
2179 5029 4.000988 TCGTTCTGCTTTCCAATTACTCC 58.999 43.478 0.00 0.00 0.00 3.85
2180 5030 4.093556 CCTCGTTCTGCTTTCCAATTACTC 59.906 45.833 0.00 0.00 0.00 2.59
2181 5031 4.003648 CCTCGTTCTGCTTTCCAATTACT 58.996 43.478 0.00 0.00 0.00 2.24
2182 5032 4.000988 TCCTCGTTCTGCTTTCCAATTAC 58.999 43.478 0.00 0.00 0.00 1.89
2183 5033 4.253685 CTCCTCGTTCTGCTTTCCAATTA 58.746 43.478 0.00 0.00 0.00 1.40
2184 5034 3.077359 CTCCTCGTTCTGCTTTCCAATT 58.923 45.455 0.00 0.00 0.00 2.32
2185 5035 2.039084 ACTCCTCGTTCTGCTTTCCAAT 59.961 45.455 0.00 0.00 0.00 3.16
2186 5036 1.416401 ACTCCTCGTTCTGCTTTCCAA 59.584 47.619 0.00 0.00 0.00 3.53
2187 5037 1.048601 ACTCCTCGTTCTGCTTTCCA 58.951 50.000 0.00 0.00 0.00 3.53
2188 5038 2.171341 AACTCCTCGTTCTGCTTTCC 57.829 50.000 0.00 0.00 0.00 3.13
2189 5039 5.864628 AAATAACTCCTCGTTCTGCTTTC 57.135 39.130 0.00 0.00 37.05 2.62
2190 5040 6.371825 CCTTAAATAACTCCTCGTTCTGCTTT 59.628 38.462 0.00 0.00 37.05 3.51
2191 5041 5.875359 CCTTAAATAACTCCTCGTTCTGCTT 59.125 40.000 0.00 0.00 37.05 3.91
2192 5042 5.420409 CCTTAAATAACTCCTCGTTCTGCT 58.580 41.667 0.00 0.00 37.05 4.24
2193 5043 4.571176 CCCTTAAATAACTCCTCGTTCTGC 59.429 45.833 0.00 0.00 37.05 4.26
2194 5044 5.974108 TCCCTTAAATAACTCCTCGTTCTG 58.026 41.667 0.00 0.00 37.05 3.02
2195 5045 5.720520 ACTCCCTTAAATAACTCCTCGTTCT 59.279 40.000 0.00 0.00 37.05 3.01
2196 5046 5.811100 CACTCCCTTAAATAACTCCTCGTTC 59.189 44.000 0.00 0.00 37.05 3.95
2197 5047 5.338137 CCACTCCCTTAAATAACTCCTCGTT 60.338 44.000 0.00 0.00 39.64 3.85
2198 5048 4.161754 CCACTCCCTTAAATAACTCCTCGT 59.838 45.833 0.00 0.00 0.00 4.18
2199 5049 4.694339 CCACTCCCTTAAATAACTCCTCG 58.306 47.826 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.