Multiple sequence alignment - TraesCS7A01G471200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G471200 chr7A 100.000 2438 0 0 1 2438 667229112 667231549 0.000000e+00 4503.0
1 TraesCS7A01G471200 chr7A 85.030 668 94 5 846 1510 667962910 667962246 0.000000e+00 675.0
2 TraesCS7A01G471200 chr7A 83.292 802 55 33 136 904 667354383 667355138 0.000000e+00 665.0
3 TraesCS7A01G471200 chr7A 84.047 677 96 7 842 1508 667945662 667944988 2.040000e-180 641.0
4 TraesCS7A01G471200 chr7A 79.878 492 97 2 929 1419 668256689 668256199 2.300000e-95 359.0
5 TraesCS7A01G471200 chr7A 96.532 173 5 1 1920 2092 115807517 115807688 3.970000e-73 285.0
6 TraesCS7A01G471200 chr7A 81.720 186 25 5 15 195 667354208 667354389 1.950000e-31 147.0
7 TraesCS7A01G471200 chr7A 79.775 89 18 0 356 444 668734288 668734200 5.630000e-07 65.8
8 TraesCS7A01G471200 chr7A 92.683 41 3 0 393 433 668312301 668312261 2.620000e-05 60.2
9 TraesCS7A01G471200 chr7A 96.774 31 1 0 1208 1238 668779630 668779660 4.000000e-03 52.8
10 TraesCS7A01G471200 chr7D 87.892 1784 94 37 238 1926 576302272 576304028 0.000000e+00 1986.0
11 TraesCS7A01G471200 chr7D 84.444 675 97 4 842 1508 576634390 576633716 0.000000e+00 658.0
12 TraesCS7A01G471200 chr7D 96.694 121 4 0 1 121 576301751 576301871 4.110000e-48 202.0
13 TraesCS7A01G471200 chr7D 89.552 67 7 0 180 246 576302187 576302253 4.320000e-13 86.1
14 TraesCS7A01G471200 chr7B 91.913 1286 75 9 238 1520 639038586 639039845 0.000000e+00 1772.0
15 TraesCS7A01G471200 chr7B 78.947 494 98 6 929 1419 639515052 639514562 5.020000e-87 331.0
16 TraesCS7A01G471200 chr7B 90.496 242 18 4 1676 1913 639040129 639040369 5.060000e-82 315.0
17 TraesCS7A01G471200 chr7B 77.397 146 33 0 357 502 639383233 639383088 1.200000e-13 87.9
18 TraesCS7A01G471200 chr7B 82.558 86 15 0 356 441 639277923 639278008 2.600000e-10 76.8
19 TraesCS7A01G471200 chr1D 97.110 173 5 0 1924 2096 178466473 178466301 2.370000e-75 292.0
20 TraesCS7A01G471200 chr1D 96.089 179 6 1 1926 2103 444346332 444346154 8.530000e-75 291.0
21 TraesCS7A01G471200 chr2D 97.633 169 4 0 1923 2091 560959653 560959485 8.530000e-75 291.0
22 TraesCS7A01G471200 chr5A 97.619 168 4 0 1924 2091 290391694 290391861 3.070000e-74 289.0
23 TraesCS7A01G471200 chr4D 97.619 168 4 0 1924 2091 75782220 75782053 3.070000e-74 289.0
24 TraesCS7A01G471200 chr4D 97.619 168 4 0 1924 2091 93338039 93338206 3.070000e-74 289.0
25 TraesCS7A01G471200 chr4A 97.059 170 5 0 1924 2093 362067908 362068077 1.100000e-73 287.0
26 TraesCS7A01G471200 chr6B 95.480 177 6 2 1924 2100 211161646 211161472 5.130000e-72 281.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G471200 chr7A 667229112 667231549 2437 False 4503.000000 4503 100.000000 1 2438 1 chr7A.!!$F2 2437
1 TraesCS7A01G471200 chr7A 667962246 667962910 664 True 675.000000 675 85.030000 846 1510 1 chr7A.!!$R2 664
2 TraesCS7A01G471200 chr7A 667944988 667945662 674 True 641.000000 641 84.047000 842 1508 1 chr7A.!!$R1 666
3 TraesCS7A01G471200 chr7A 667354208 667355138 930 False 406.000000 665 82.506000 15 904 2 chr7A.!!$F4 889
4 TraesCS7A01G471200 chr7D 576301751 576304028 2277 False 758.033333 1986 91.379333 1 1926 3 chr7D.!!$F1 1925
5 TraesCS7A01G471200 chr7D 576633716 576634390 674 True 658.000000 658 84.444000 842 1508 1 chr7D.!!$R1 666
6 TraesCS7A01G471200 chr7B 639038586 639040369 1783 False 1043.500000 1772 91.204500 238 1913 2 chr7B.!!$F2 1675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 625 0.669318 CACGCCTTTCTCGTTGCCTA 60.669 55.0 0.0 0.0 38.19 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2165 2678 0.036577 ACCATGAGAGACTGCAGCAC 60.037 55.0 15.27 8.6 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 1.335872 CCACCGTCAATTTTGGCAGTC 60.336 52.381 0.00 0.00 31.86 3.51
147 151 1.152567 CCAACCTCCACCAGCCAAA 60.153 57.895 0.00 0.00 0.00 3.28
185 446 3.738481 CTCCCCCAAATCCGGCCA 61.738 66.667 2.24 0.00 0.00 5.36
309 620 1.004918 CCCTCACGCCTTTCTCGTT 60.005 57.895 0.00 0.00 38.19 3.85
314 625 0.669318 CACGCCTTTCTCGTTGCCTA 60.669 55.000 0.00 0.00 38.19 3.93
322 633 2.961526 TCTCGTTGCCTACTGAATCC 57.038 50.000 0.00 0.00 0.00 3.01
324 635 2.427453 TCTCGTTGCCTACTGAATCCTC 59.573 50.000 0.00 0.00 0.00 3.71
353 664 1.337823 CGTTCGTCTCCACCCAGAAAT 60.338 52.381 0.00 0.00 0.00 2.17
483 818 2.025226 AGATCTAGGTGGACCTTCGACA 60.025 50.000 3.03 0.00 46.09 4.35
532 867 2.894387 GATGACCAGCTCTGCCGC 60.894 66.667 0.00 0.00 0.00 6.53
657 1005 5.521906 TTCAAACCGTCCAATGAAATCAA 57.478 34.783 0.00 0.00 0.00 2.57
658 1006 5.521906 TCAAACCGTCCAATGAAATCAAA 57.478 34.783 0.00 0.00 0.00 2.69
659 1007 5.285651 TCAAACCGTCCAATGAAATCAAAC 58.714 37.500 0.00 0.00 0.00 2.93
660 1008 3.934457 ACCGTCCAATGAAATCAAACC 57.066 42.857 0.00 0.00 0.00 3.27
661 1009 2.227865 ACCGTCCAATGAAATCAAACCG 59.772 45.455 0.00 0.00 0.00 4.44
662 1010 2.227865 CCGTCCAATGAAATCAAACCGT 59.772 45.455 0.00 0.00 0.00 4.83
663 1011 3.488489 CGTCCAATGAAATCAAACCGTC 58.512 45.455 0.00 0.00 0.00 4.79
664 1012 3.669557 CGTCCAATGAAATCAAACCGTCC 60.670 47.826 0.00 0.00 0.00 4.79
665 1013 3.254657 GTCCAATGAAATCAAACCGTCCA 59.745 43.478 0.00 0.00 0.00 4.02
666 1014 3.891977 TCCAATGAAATCAAACCGTCCAA 59.108 39.130 0.00 0.00 0.00 3.53
667 1015 4.526262 TCCAATGAAATCAAACCGTCCAAT 59.474 37.500 0.00 0.00 0.00 3.16
668 1016 4.626604 CCAATGAAATCAAACCGTCCAATG 59.373 41.667 0.00 0.00 0.00 2.82
669 1017 5.468592 CAATGAAATCAAACCGTCCAATGA 58.531 37.500 0.00 0.00 0.00 2.57
670 1018 5.720371 ATGAAATCAAACCGTCCAATGAA 57.280 34.783 0.00 0.00 0.00 2.57
671 1019 5.521906 TGAAATCAAACCGTCCAATGAAA 57.478 34.783 0.00 0.00 0.00 2.69
672 1020 6.095432 TGAAATCAAACCGTCCAATGAAAT 57.905 33.333 0.00 0.00 0.00 2.17
673 1021 6.155827 TGAAATCAAACCGTCCAATGAAATC 58.844 36.000 0.00 0.00 0.00 2.17
674 1022 5.720371 AATCAAACCGTCCAATGAAATCA 57.280 34.783 0.00 0.00 0.00 2.57
856 1204 1.372623 GTGACGGACCCTGTCGAAC 60.373 63.158 0.00 0.00 39.22 3.95
1107 1455 5.060662 TGCTTCACTACATCTACACTGAC 57.939 43.478 0.00 0.00 0.00 3.51
1242 1590 2.548904 GCTCTCTGATGGCATCAATGTC 59.451 50.000 28.50 14.17 39.11 3.06
1269 1617 1.974343 AGCGACGTCTCTGGCTCTT 60.974 57.895 14.70 0.00 0.00 2.85
1455 1811 5.119898 CGGATAAAGAGCTGATGCATAGTTC 59.880 44.000 0.00 5.63 42.74 3.01
1456 1812 5.994054 GGATAAAGAGCTGATGCATAGTTCA 59.006 40.000 0.00 0.00 42.74 3.18
1463 1827 4.063689 GCTGATGCATAGTTCAGTGCTAT 58.936 43.478 14.77 0.00 41.16 2.97
1487 1851 4.157289 CAGAGGTCCAAATTTCAGTGATGG 59.843 45.833 4.36 4.36 0.00 3.51
1497 1861 5.606348 ATTTCAGTGATGGGTAGTCTCTC 57.394 43.478 0.00 0.00 0.00 3.20
1515 1879 5.176590 GTCTCTCTTTGTGCTTGTCTAGTTG 59.823 44.000 0.00 0.00 0.00 3.16
1520 1884 3.762407 TGTGCTTGTCTAGTTGCCTTA 57.238 42.857 0.00 0.00 0.00 2.69
1522 1886 3.181459 TGTGCTTGTCTAGTTGCCTTACA 60.181 43.478 0.00 0.00 0.00 2.41
1525 1889 4.020218 TGCTTGTCTAGTTGCCTTACATCT 60.020 41.667 0.00 0.00 32.94 2.90
1559 1946 2.086869 CTCTGGTTGTGCCTGTTATGG 58.913 52.381 0.00 0.00 37.45 2.74
1597 1984 2.644798 AGCTTATGTTCCCCTGACTTGT 59.355 45.455 0.00 0.00 0.00 3.16
1612 1999 3.243367 TGACTTGTTTATGTGCAACCTGC 60.243 43.478 0.00 0.00 45.29 4.85
1621 2034 2.580962 TGTGCAACCTGCTGTGATTTA 58.419 42.857 0.00 0.00 45.31 1.40
1655 2068 5.190925 TCCTTGTATGGTTATTACTGCCACT 59.809 40.000 0.00 0.00 34.84 4.00
1666 2163 5.950544 ATTACTGCCACTAGGTGATACAA 57.049 39.130 0.00 0.00 35.23 2.41
1667 2164 5.950544 TTACTGCCACTAGGTGATACAAT 57.049 39.130 0.00 0.00 35.23 2.71
1725 2232 6.878389 TGTGTTTCTATGACTCATGTAATGCA 59.122 34.615 1.42 0.00 46.21 3.96
1729 2236 6.908870 TCTATGACTCATGTAATGCACAAC 57.091 37.500 1.42 0.00 46.21 3.32
1777 2284 8.461222 TCATTGTGATTTAATTTAGTGCTCCAG 58.539 33.333 0.00 0.00 0.00 3.86
1802 2309 4.638865 ACGGGCACTAAATTTCTATTCCAC 59.361 41.667 0.00 0.00 0.00 4.02
1804 2311 4.879545 GGGCACTAAATTTCTATTCCACGA 59.120 41.667 0.00 0.00 0.00 4.35
1806 2313 6.127842 GGGCACTAAATTTCTATTCCACGAAA 60.128 38.462 0.00 0.00 34.08 3.46
1808 2315 7.973944 GGCACTAAATTTCTATTCCACGAAAAT 59.026 33.333 0.00 0.00 33.37 1.82
1898 2409 8.812972 ACAATTCACTGTTACTGAAGTAGGATA 58.187 33.333 0.00 0.00 31.22 2.59
1932 2445 8.191534 TCCTTAAGTAGCAAGAATATACTCCC 57.808 38.462 0.97 0.00 0.00 4.30
1933 2446 8.011290 TCCTTAAGTAGCAAGAATATACTCCCT 58.989 37.037 0.97 0.00 0.00 4.20
1934 2447 8.308207 CCTTAAGTAGCAAGAATATACTCCCTC 58.692 40.741 0.97 0.00 0.00 4.30
1935 2448 6.673839 AAGTAGCAAGAATATACTCCCTCC 57.326 41.667 0.00 0.00 0.00 4.30
1936 2449 4.767928 AGTAGCAAGAATATACTCCCTCCG 59.232 45.833 0.00 0.00 0.00 4.63
1937 2450 3.577919 AGCAAGAATATACTCCCTCCGT 58.422 45.455 0.00 0.00 0.00 4.69
1938 2451 3.967987 AGCAAGAATATACTCCCTCCGTT 59.032 43.478 0.00 0.00 0.00 4.44
1939 2452 4.039366 AGCAAGAATATACTCCCTCCGTTC 59.961 45.833 0.00 0.00 0.00 3.95
1940 2453 4.799917 GCAAGAATATACTCCCTCCGTTCC 60.800 50.000 0.00 0.00 0.00 3.62
1941 2454 4.472690 AGAATATACTCCCTCCGTTCCT 57.527 45.455 0.00 0.00 0.00 3.36
1942 2455 5.595814 AGAATATACTCCCTCCGTTCCTA 57.404 43.478 0.00 0.00 0.00 2.94
1943 2456 5.961897 AGAATATACTCCCTCCGTTCCTAA 58.038 41.667 0.00 0.00 0.00 2.69
1944 2457 6.379579 AGAATATACTCCCTCCGTTCCTAAA 58.620 40.000 0.00 0.00 0.00 1.85
1945 2458 7.017531 AGAATATACTCCCTCCGTTCCTAAAT 58.982 38.462 0.00 0.00 0.00 1.40
1946 2459 8.175431 AGAATATACTCCCTCCGTTCCTAAATA 58.825 37.037 0.00 0.00 0.00 1.40
1947 2460 8.912614 AATATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
1948 2461 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
1949 2462 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
1950 2463 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
1951 2464 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
1952 2465 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
1953 2466 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
1954 2467 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
1955 2468 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
1956 2469 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
1957 2470 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
1958 2471 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
1959 2472 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
1960 2473 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
1973 2486 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
1974 2487 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
1975 2488 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
1976 2489 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
1977 2490 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
1978 2491 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
1979 2492 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
1980 2493 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
1981 2494 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
1983 2496 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
1984 2497 8.367911 AGAGATTTCAACAAGTGACTACATACA 58.632 33.333 0.00 0.00 35.39 2.29
1985 2498 8.539770 AGATTTCAACAAGTGACTACATACAG 57.460 34.615 0.00 0.00 35.39 2.74
1986 2499 8.367911 AGATTTCAACAAGTGACTACATACAGA 58.632 33.333 0.00 0.00 35.39 3.41
1987 2500 7.946655 TTTCAACAAGTGACTACATACAGAG 57.053 36.000 0.00 0.00 35.39 3.35
1988 2501 5.470368 TCAACAAGTGACTACATACAGAGC 58.530 41.667 0.00 0.00 0.00 4.09
1989 2502 5.010617 TCAACAAGTGACTACATACAGAGCA 59.989 40.000 0.00 0.00 0.00 4.26
1990 2503 5.468540 ACAAGTGACTACATACAGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
1991 2504 5.853936 ACAAGTGACTACATACAGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
1992 2505 6.288294 ACAAGTGACTACATACAGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
1993 2506 6.936900 ACAAGTGACTACATACAGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
1994 2507 6.974932 AGTGACTACATACAGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
1995 2508 6.701340 AGTGACTACATACAGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
1996 2509 6.815641 AGTGACTACATACAGAGCAAAATGAG 59.184 38.462 0.00 0.00 0.00 2.90
1997 2510 6.591834 GTGACTACATACAGAGCAAAATGAGT 59.408 38.462 0.00 0.00 0.00 3.41
1998 2511 6.591448 TGACTACATACAGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
1999 2512 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
2000 2513 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
2001 2514 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
2002 2515 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
2003 2516 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
2004 2517 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
2005 2518 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
2006 2519 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
2007 2520 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
2037 2550 9.890629 AAAATATGTCTATATACATCCGCATGT 57.109 29.630 7.00 0.00 45.73 3.21
2040 2553 7.646548 ATGTCTATATACATCCGCATGTAGT 57.353 36.000 5.28 0.00 46.52 2.73
2041 2554 8.747538 ATGTCTATATACATCCGCATGTAGTA 57.252 34.615 5.28 0.60 46.52 1.82
2042 2555 8.209917 TGTCTATATACATCCGCATGTAGTAG 57.790 38.462 5.28 9.60 46.52 2.57
2043 2556 7.827729 TGTCTATATACATCCGCATGTAGTAGT 59.172 37.037 15.70 0.38 46.52 2.73
2044 2557 8.336806 GTCTATATACATCCGCATGTAGTAGTC 58.663 40.741 15.70 10.18 46.52 2.59
2045 2558 4.785511 ATACATCCGCATGTAGTAGTCC 57.214 45.455 5.28 0.00 46.52 3.85
2046 2559 2.384828 ACATCCGCATGTAGTAGTCCA 58.615 47.619 0.00 0.00 41.81 4.02
2047 2560 2.965831 ACATCCGCATGTAGTAGTCCAT 59.034 45.455 0.00 0.00 41.81 3.41
2048 2561 3.388024 ACATCCGCATGTAGTAGTCCATT 59.612 43.478 0.00 0.00 41.81 3.16
2049 2562 4.141711 ACATCCGCATGTAGTAGTCCATTT 60.142 41.667 0.00 0.00 41.81 2.32
2050 2563 3.792401 TCCGCATGTAGTAGTCCATTTG 58.208 45.455 0.00 0.00 0.00 2.32
2051 2564 3.449377 TCCGCATGTAGTAGTCCATTTGA 59.551 43.478 0.00 0.00 0.00 2.69
2052 2565 4.081365 TCCGCATGTAGTAGTCCATTTGAA 60.081 41.667 0.00 0.00 0.00 2.69
2053 2566 4.634004 CCGCATGTAGTAGTCCATTTGAAA 59.366 41.667 0.00 0.00 0.00 2.69
2054 2567 5.296780 CCGCATGTAGTAGTCCATTTGAAAT 59.703 40.000 0.00 0.00 0.00 2.17
2055 2568 6.422223 CGCATGTAGTAGTCCATTTGAAATC 58.578 40.000 0.00 0.00 0.00 2.17
2056 2569 6.258727 CGCATGTAGTAGTCCATTTGAAATCT 59.741 38.462 0.00 0.00 0.00 2.40
2057 2570 7.517417 CGCATGTAGTAGTCCATTTGAAATCTC 60.517 40.741 0.00 0.00 0.00 2.75
2058 2571 7.497249 GCATGTAGTAGTCCATTTGAAATCTCT 59.503 37.037 0.00 0.00 0.00 3.10
2067 2580 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2068 2581 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2086 2599 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
2087 2600 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2088 2601 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
2089 2602 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
2090 2603 8.344939 ACAAATATTTAGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
2091 2604 8.787818 ACAAATATTTAGGAATGGAGGGAGTAA 58.212 33.333 0.00 0.00 0.00 2.24
2092 2605 9.289782 CAAATATTTAGGAATGGAGGGAGTAAG 57.710 37.037 0.00 0.00 0.00 2.34
2093 2606 8.582891 AATATTTAGGAATGGAGGGAGTAAGT 57.417 34.615 0.00 0.00 0.00 2.24
2094 2607 5.693769 TTTAGGAATGGAGGGAGTAAGTG 57.306 43.478 0.00 0.00 0.00 3.16
2095 2608 3.207044 AGGAATGGAGGGAGTAAGTGT 57.793 47.619 0.00 0.00 0.00 3.55
2096 2609 3.532102 AGGAATGGAGGGAGTAAGTGTT 58.468 45.455 0.00 0.00 0.00 3.32
2097 2610 4.695606 AGGAATGGAGGGAGTAAGTGTTA 58.304 43.478 0.00 0.00 0.00 2.41
2098 2611 4.470304 AGGAATGGAGGGAGTAAGTGTTAC 59.530 45.833 0.00 0.00 36.38 2.50
2100 2613 5.420409 GAATGGAGGGAGTAAGTGTTACTG 58.580 45.833 4.07 0.00 46.01 2.74
2101 2614 4.122337 TGGAGGGAGTAAGTGTTACTGA 57.878 45.455 4.07 0.00 46.01 3.41
2102 2615 4.485875 TGGAGGGAGTAAGTGTTACTGAA 58.514 43.478 4.07 0.00 46.01 3.02
2103 2616 4.903049 TGGAGGGAGTAAGTGTTACTGAAA 59.097 41.667 4.07 0.00 46.01 2.69
2104 2617 5.546499 TGGAGGGAGTAAGTGTTACTGAAAT 59.454 40.000 4.07 0.00 46.01 2.17
2105 2618 6.727231 TGGAGGGAGTAAGTGTTACTGAAATA 59.273 38.462 4.07 0.00 46.01 1.40
2106 2619 7.093465 TGGAGGGAGTAAGTGTTACTGAAATAG 60.093 40.741 4.07 0.00 46.01 1.73
2107 2620 7.184067 AGGGAGTAAGTGTTACTGAAATAGG 57.816 40.000 4.07 0.00 46.01 2.57
2108 2621 6.958192 AGGGAGTAAGTGTTACTGAAATAGGA 59.042 38.462 4.07 0.00 46.01 2.94
2109 2622 7.624077 AGGGAGTAAGTGTTACTGAAATAGGAT 59.376 37.037 4.07 0.00 46.01 3.24
2110 2623 7.711339 GGGAGTAAGTGTTACTGAAATAGGATG 59.289 40.741 4.07 0.00 46.01 3.51
2111 2624 8.258708 GGAGTAAGTGTTACTGAAATAGGATGT 58.741 37.037 4.07 0.00 46.01 3.06
2112 2625 9.654663 GAGTAAGTGTTACTGAAATAGGATGTT 57.345 33.333 4.07 0.00 46.01 2.71
2127 2640 9.942850 AAATAGGATGTTTAAAATTCCTTGTGG 57.057 29.630 19.84 0.00 39.33 4.17
2128 2641 8.893563 ATAGGATGTTTAAAATTCCTTGTGGA 57.106 30.769 19.84 7.26 39.33 4.02
2143 2656 0.947244 GTGGAACAACTCACAGCTGG 59.053 55.000 19.93 7.28 44.16 4.85
2144 2657 0.546122 TGGAACAACTCACAGCTGGT 59.454 50.000 19.93 3.12 31.92 4.00
2145 2658 1.064758 TGGAACAACTCACAGCTGGTT 60.065 47.619 19.93 11.04 31.92 3.67
2146 2659 1.604278 GGAACAACTCACAGCTGGTTC 59.396 52.381 19.93 18.62 35.20 3.62
2147 2660 2.565841 GAACAACTCACAGCTGGTTCT 58.434 47.619 19.93 2.24 33.65 3.01
2148 2661 1.959042 ACAACTCACAGCTGGTTCTG 58.041 50.000 19.93 7.22 39.86 3.02
2149 2662 1.486310 ACAACTCACAGCTGGTTCTGA 59.514 47.619 19.93 11.50 37.51 3.27
2150 2663 2.092968 ACAACTCACAGCTGGTTCTGAA 60.093 45.455 19.93 0.00 37.51 3.02
2151 2664 2.246719 ACTCACAGCTGGTTCTGAAC 57.753 50.000 19.93 12.05 37.51 3.18
2179 2692 6.727824 TTTTTATAAGTGCTGCAGTCTCTC 57.272 37.500 16.64 0.00 0.00 3.20
2180 2693 5.405935 TTTATAAGTGCTGCAGTCTCTCA 57.594 39.130 16.64 0.61 0.00 3.27
2181 2694 5.604758 TTATAAGTGCTGCAGTCTCTCAT 57.395 39.130 16.64 8.09 0.00 2.90
2182 2695 2.096220 AAGTGCTGCAGTCTCTCATG 57.904 50.000 16.64 0.00 0.00 3.07
2183 2696 0.249676 AGTGCTGCAGTCTCTCATGG 59.750 55.000 16.64 0.00 0.00 3.66
2184 2697 0.036577 GTGCTGCAGTCTCTCATGGT 60.037 55.000 16.64 0.00 0.00 3.55
2185 2698 0.689055 TGCTGCAGTCTCTCATGGTT 59.311 50.000 16.64 0.00 0.00 3.67
2186 2699 1.085091 GCTGCAGTCTCTCATGGTTG 58.915 55.000 16.64 0.00 0.00 3.77
2187 2700 1.085091 CTGCAGTCTCTCATGGTTGC 58.915 55.000 5.25 0.00 0.00 4.17
2188 2701 0.689055 TGCAGTCTCTCATGGTTGCT 59.311 50.000 0.00 0.00 33.00 3.91
2189 2702 1.085091 GCAGTCTCTCATGGTTGCTG 58.915 55.000 0.00 0.00 0.00 4.41
2190 2703 1.610102 GCAGTCTCTCATGGTTGCTGT 60.610 52.381 0.00 0.00 0.00 4.40
2191 2704 2.775890 CAGTCTCTCATGGTTGCTGTT 58.224 47.619 0.00 0.00 0.00 3.16
2192 2705 2.483106 CAGTCTCTCATGGTTGCTGTTG 59.517 50.000 0.00 0.00 0.00 3.33
2193 2706 1.198637 GTCTCTCATGGTTGCTGTTGC 59.801 52.381 0.00 0.00 40.20 4.17
2194 2707 0.524862 CTCTCATGGTTGCTGTTGCC 59.475 55.000 0.00 0.00 38.71 4.52
2195 2708 0.111061 TCTCATGGTTGCTGTTGCCT 59.889 50.000 0.00 0.00 38.71 4.75
2196 2709 0.242825 CTCATGGTTGCTGTTGCCTG 59.757 55.000 0.00 0.00 38.71 4.85
2197 2710 0.178995 TCATGGTTGCTGTTGCCTGA 60.179 50.000 0.00 0.00 38.71 3.86
2198 2711 0.675083 CATGGTTGCTGTTGCCTGAA 59.325 50.000 0.00 0.00 38.71 3.02
2199 2712 1.274167 CATGGTTGCTGTTGCCTGAAT 59.726 47.619 0.00 0.00 38.71 2.57
2200 2713 2.284754 TGGTTGCTGTTGCCTGAATA 57.715 45.000 0.00 0.00 38.71 1.75
2201 2714 2.806434 TGGTTGCTGTTGCCTGAATAT 58.194 42.857 0.00 0.00 38.71 1.28
2202 2715 3.164268 TGGTTGCTGTTGCCTGAATATT 58.836 40.909 0.00 0.00 38.71 1.28
2203 2716 4.339748 TGGTTGCTGTTGCCTGAATATTA 58.660 39.130 0.00 0.00 38.71 0.98
2204 2717 4.955450 TGGTTGCTGTTGCCTGAATATTAT 59.045 37.500 0.00 0.00 38.71 1.28
2205 2718 5.421693 TGGTTGCTGTTGCCTGAATATTATT 59.578 36.000 0.00 0.00 38.71 1.40
2206 2719 6.070881 TGGTTGCTGTTGCCTGAATATTATTT 60.071 34.615 0.00 0.00 38.71 1.40
2207 2720 6.818142 GGTTGCTGTTGCCTGAATATTATTTT 59.182 34.615 0.00 0.00 38.71 1.82
2208 2721 7.334171 GGTTGCTGTTGCCTGAATATTATTTTT 59.666 33.333 0.00 0.00 38.71 1.94
2230 2743 8.856490 TTTTTCTGCTTTATGACTTTGACTTC 57.144 30.769 0.00 0.00 0.00 3.01
2231 2744 6.560253 TTCTGCTTTATGACTTTGACTTCC 57.440 37.500 0.00 0.00 0.00 3.46
2232 2745 4.690748 TCTGCTTTATGACTTTGACTTCCG 59.309 41.667 0.00 0.00 0.00 4.30
2233 2746 4.637276 TGCTTTATGACTTTGACTTCCGA 58.363 39.130 0.00 0.00 0.00 4.55
2234 2747 4.690748 TGCTTTATGACTTTGACTTCCGAG 59.309 41.667 0.00 0.00 0.00 4.63
2235 2748 4.691216 GCTTTATGACTTTGACTTCCGAGT 59.309 41.667 0.00 0.00 39.32 4.18
2252 2765 4.735132 TCGGCGCGTGGGAGAAAG 62.735 66.667 8.43 0.00 0.00 2.62
2253 2766 4.735132 CGGCGCGTGGGAGAAAGA 62.735 66.667 8.43 0.00 0.00 2.52
2254 2767 2.358247 GGCGCGTGGGAGAAAGAA 60.358 61.111 8.43 0.00 0.00 2.52
2255 2768 2.677979 GGCGCGTGGGAGAAAGAAC 61.678 63.158 8.43 0.00 0.00 3.01
2256 2769 1.668151 GCGCGTGGGAGAAAGAACT 60.668 57.895 8.43 0.00 0.00 3.01
2257 2770 1.901650 GCGCGTGGGAGAAAGAACTG 61.902 60.000 8.43 0.00 0.00 3.16
2258 2771 0.319555 CGCGTGGGAGAAAGAACTGA 60.320 55.000 0.00 0.00 0.00 3.41
2259 2772 1.673033 CGCGTGGGAGAAAGAACTGAT 60.673 52.381 0.00 0.00 0.00 2.90
2260 2773 2.427506 GCGTGGGAGAAAGAACTGATT 58.572 47.619 0.00 0.00 0.00 2.57
2261 2774 2.416893 GCGTGGGAGAAAGAACTGATTC 59.583 50.000 0.00 0.00 34.78 2.52
2262 2775 3.664107 CGTGGGAGAAAGAACTGATTCA 58.336 45.455 0.00 0.00 37.29 2.57
2263 2776 4.256920 CGTGGGAGAAAGAACTGATTCAT 58.743 43.478 0.00 0.00 37.29 2.57
2264 2777 5.419542 CGTGGGAGAAAGAACTGATTCATA 58.580 41.667 0.00 0.00 37.29 2.15
2265 2778 5.521735 CGTGGGAGAAAGAACTGATTCATAG 59.478 44.000 0.00 0.00 37.29 2.23
2266 2779 6.410540 GTGGGAGAAAGAACTGATTCATAGT 58.589 40.000 0.00 0.00 37.29 2.12
2267 2780 6.881602 GTGGGAGAAAGAACTGATTCATAGTT 59.118 38.462 0.00 0.00 40.84 2.24
2268 2781 8.041323 GTGGGAGAAAGAACTGATTCATAGTTA 58.959 37.037 0.00 0.00 38.42 2.24
2269 2782 8.602424 TGGGAGAAAGAACTGATTCATAGTTAA 58.398 33.333 0.00 0.00 38.42 2.01
2270 2783 9.103861 GGGAGAAAGAACTGATTCATAGTTAAG 57.896 37.037 0.00 0.00 38.42 1.85
2271 2784 9.660180 GGAGAAAGAACTGATTCATAGTTAAGT 57.340 33.333 0.00 0.00 38.42 2.24
2273 2786 8.940952 AGAAAGAACTGATTCATAGTTAAGTGC 58.059 33.333 0.00 0.00 38.42 4.40
2274 2787 8.854614 AAAGAACTGATTCATAGTTAAGTGCT 57.145 30.769 0.00 0.00 38.42 4.40
2275 2788 9.944376 AAAGAACTGATTCATAGTTAAGTGCTA 57.056 29.630 0.00 0.00 38.42 3.49
2276 2789 8.934507 AGAACTGATTCATAGTTAAGTGCTAC 57.065 34.615 0.00 0.00 38.42 3.58
2277 2790 8.754080 AGAACTGATTCATAGTTAAGTGCTACT 58.246 33.333 0.00 0.00 38.42 2.57
2280 2793 9.409918 ACTGATTCATAGTTAAGTGCTACTAGA 57.590 33.333 0.00 0.00 30.95 2.43
2281 2794 9.891828 CTGATTCATAGTTAAGTGCTACTAGAG 57.108 37.037 0.00 0.00 30.95 2.43
2282 2795 8.851145 TGATTCATAGTTAAGTGCTACTAGAGG 58.149 37.037 0.00 0.00 30.95 3.69
2283 2796 8.770010 ATTCATAGTTAAGTGCTACTAGAGGT 57.230 34.615 0.00 0.00 30.95 3.85
2284 2797 7.804843 TCATAGTTAAGTGCTACTAGAGGTC 57.195 40.000 0.00 0.00 30.95 3.85
2285 2798 7.575505 TCATAGTTAAGTGCTACTAGAGGTCT 58.424 38.462 0.00 0.00 30.95 3.85
2286 2799 8.712103 TCATAGTTAAGTGCTACTAGAGGTCTA 58.288 37.037 0.00 0.00 30.95 2.59
2287 2800 9.339850 CATAGTTAAGTGCTACTAGAGGTCTAA 57.660 37.037 0.00 0.00 30.95 2.10
2288 2801 9.917887 ATAGTTAAGTGCTACTAGAGGTCTAAA 57.082 33.333 0.00 0.00 30.95 1.85
2289 2802 8.826293 AGTTAAGTGCTACTAGAGGTCTAAAT 57.174 34.615 0.00 0.00 0.00 1.40
2290 2803 9.257428 AGTTAAGTGCTACTAGAGGTCTAAATT 57.743 33.333 0.00 0.00 0.00 1.82
2291 2804 9.872721 GTTAAGTGCTACTAGAGGTCTAAATTT 57.127 33.333 0.00 0.00 0.00 1.82
2293 2806 7.719871 AGTGCTACTAGAGGTCTAAATTTCA 57.280 36.000 0.00 0.00 0.00 2.69
2294 2807 8.135382 AGTGCTACTAGAGGTCTAAATTTCAA 57.865 34.615 0.00 0.00 0.00 2.69
2295 2808 8.763601 AGTGCTACTAGAGGTCTAAATTTCAAT 58.236 33.333 0.00 0.00 0.00 2.57
2296 2809 8.821894 GTGCTACTAGAGGTCTAAATTTCAATG 58.178 37.037 0.00 0.00 0.00 2.82
2297 2810 8.758829 TGCTACTAGAGGTCTAAATTTCAATGA 58.241 33.333 0.00 0.00 0.00 2.57
2298 2811 9.771534 GCTACTAGAGGTCTAAATTTCAATGAT 57.228 33.333 0.00 0.00 0.00 2.45
2301 2814 9.388506 ACTAGAGGTCTAAATTTCAATGATGTG 57.611 33.333 0.00 0.00 0.00 3.21
2302 2815 9.388506 CTAGAGGTCTAAATTTCAATGATGTGT 57.611 33.333 0.00 0.00 0.00 3.72
2303 2816 8.048534 AGAGGTCTAAATTTCAATGATGTGTG 57.951 34.615 0.00 0.00 0.00 3.82
2304 2817 7.121759 AGAGGTCTAAATTTCAATGATGTGTGG 59.878 37.037 0.00 0.00 0.00 4.17
2305 2818 6.721208 AGGTCTAAATTTCAATGATGTGTGGT 59.279 34.615 0.00 0.00 0.00 4.16
2306 2819 7.029563 GGTCTAAATTTCAATGATGTGTGGTC 58.970 38.462 0.00 0.00 0.00 4.02
2307 2820 7.094205 GGTCTAAATTTCAATGATGTGTGGTCT 60.094 37.037 0.00 0.00 0.00 3.85
2308 2821 7.965107 GTCTAAATTTCAATGATGTGTGGTCTC 59.035 37.037 0.00 0.00 0.00 3.36
2309 2822 6.906157 AAATTTCAATGATGTGTGGTCTCT 57.094 33.333 0.00 0.00 0.00 3.10
2310 2823 5.892160 ATTTCAATGATGTGTGGTCTCTG 57.108 39.130 0.00 0.00 0.00 3.35
2311 2824 4.356405 TTCAATGATGTGTGGTCTCTGT 57.644 40.909 0.00 0.00 0.00 3.41
2312 2825 3.930336 TCAATGATGTGTGGTCTCTGTC 58.070 45.455 0.00 0.00 0.00 3.51
2313 2826 3.580022 TCAATGATGTGTGGTCTCTGTCT 59.420 43.478 0.00 0.00 0.00 3.41
2314 2827 3.606595 ATGATGTGTGGTCTCTGTCTG 57.393 47.619 0.00 0.00 0.00 3.51
2315 2828 2.319844 TGATGTGTGGTCTCTGTCTGT 58.680 47.619 0.00 0.00 0.00 3.41
2316 2829 2.036346 TGATGTGTGGTCTCTGTCTGTG 59.964 50.000 0.00 0.00 0.00 3.66
2317 2830 0.104855 TGTGTGGTCTCTGTCTGTGC 59.895 55.000 0.00 0.00 0.00 4.57
2318 2831 0.390860 GTGTGGTCTCTGTCTGTGCT 59.609 55.000 0.00 0.00 0.00 4.40
2319 2832 1.123077 TGTGGTCTCTGTCTGTGCTT 58.877 50.000 0.00 0.00 0.00 3.91
2320 2833 1.486310 TGTGGTCTCTGTCTGTGCTTT 59.514 47.619 0.00 0.00 0.00 3.51
2321 2834 2.092968 TGTGGTCTCTGTCTGTGCTTTT 60.093 45.455 0.00 0.00 0.00 2.27
2322 2835 2.545946 GTGGTCTCTGTCTGTGCTTTTC 59.454 50.000 0.00 0.00 0.00 2.29
2323 2836 2.435805 TGGTCTCTGTCTGTGCTTTTCT 59.564 45.455 0.00 0.00 0.00 2.52
2324 2837 3.641436 TGGTCTCTGTCTGTGCTTTTCTA 59.359 43.478 0.00 0.00 0.00 2.10
2325 2838 4.241681 GGTCTCTGTCTGTGCTTTTCTAG 58.758 47.826 0.00 0.00 0.00 2.43
2326 2839 4.262249 GGTCTCTGTCTGTGCTTTTCTAGT 60.262 45.833 0.00 0.00 0.00 2.57
2327 2840 5.293560 GTCTCTGTCTGTGCTTTTCTAGTT 58.706 41.667 0.00 0.00 0.00 2.24
2328 2841 6.448006 GTCTCTGTCTGTGCTTTTCTAGTTA 58.552 40.000 0.00 0.00 0.00 2.24
2329 2842 6.924060 GTCTCTGTCTGTGCTTTTCTAGTTAA 59.076 38.462 0.00 0.00 0.00 2.01
2330 2843 7.438459 GTCTCTGTCTGTGCTTTTCTAGTTAAA 59.562 37.037 0.00 0.00 0.00 1.52
2331 2844 7.438459 TCTCTGTCTGTGCTTTTCTAGTTAAAC 59.562 37.037 0.00 0.00 0.00 2.01
2332 2845 7.272978 TCTGTCTGTGCTTTTCTAGTTAAACT 58.727 34.615 0.00 0.00 0.00 2.66
2333 2846 7.769044 TCTGTCTGTGCTTTTCTAGTTAAACTT 59.231 33.333 0.00 0.00 0.00 2.66
2334 2847 7.693952 TGTCTGTGCTTTTCTAGTTAAACTTG 58.306 34.615 0.00 0.00 0.00 3.16
2335 2848 7.335924 TGTCTGTGCTTTTCTAGTTAAACTTGT 59.664 33.333 0.00 0.00 0.00 3.16
2336 2849 7.640240 GTCTGTGCTTTTCTAGTTAAACTTGTG 59.360 37.037 0.00 0.00 0.00 3.33
2337 2850 7.335924 TCTGTGCTTTTCTAGTTAAACTTGTGT 59.664 33.333 0.00 0.00 0.00 3.72
2338 2851 7.469260 TGTGCTTTTCTAGTTAAACTTGTGTC 58.531 34.615 0.00 0.00 0.00 3.67
2339 2852 7.119992 TGTGCTTTTCTAGTTAAACTTGTGTCA 59.880 33.333 0.00 0.00 0.00 3.58
2340 2853 8.129211 GTGCTTTTCTAGTTAAACTTGTGTCAT 58.871 33.333 0.00 0.00 0.00 3.06
2341 2854 8.128582 TGCTTTTCTAGTTAAACTTGTGTCATG 58.871 33.333 0.00 0.00 0.00 3.07
2342 2855 8.129211 GCTTTTCTAGTTAAACTTGTGTCATGT 58.871 33.333 0.00 0.00 0.00 3.21
2343 2856 9.651718 CTTTTCTAGTTAAACTTGTGTCATGTC 57.348 33.333 0.00 0.00 0.00 3.06
2344 2857 8.958119 TTTCTAGTTAAACTTGTGTCATGTCT 57.042 30.769 0.00 0.00 0.00 3.41
2345 2858 8.958119 TTCTAGTTAAACTTGTGTCATGTCTT 57.042 30.769 0.00 0.00 0.00 3.01
2349 2862 8.500753 AGTTAAACTTGTGTCATGTCTTAACA 57.499 30.769 19.32 0.00 40.38 2.41
2350 2863 8.612619 AGTTAAACTTGTGTCATGTCTTAACAG 58.387 33.333 19.32 0.00 39.20 3.16
2351 2864 5.424121 AACTTGTGTCATGTCTTAACAGC 57.576 39.130 0.00 0.00 39.20 4.40
2352 2865 3.494626 ACTTGTGTCATGTCTTAACAGCG 59.505 43.478 0.00 0.00 39.20 5.18
2353 2866 3.378911 TGTGTCATGTCTTAACAGCGA 57.621 42.857 0.00 0.00 39.20 4.93
2354 2867 3.723260 TGTGTCATGTCTTAACAGCGAA 58.277 40.909 0.00 0.00 39.20 4.70
2355 2868 4.314961 TGTGTCATGTCTTAACAGCGAAT 58.685 39.130 0.00 0.00 39.20 3.34
2356 2869 4.388773 TGTGTCATGTCTTAACAGCGAATC 59.611 41.667 0.00 0.00 39.20 2.52
2357 2870 3.612423 TGTCATGTCTTAACAGCGAATCG 59.388 43.478 0.00 0.00 39.20 3.34
2358 2871 3.857665 GTCATGTCTTAACAGCGAATCGA 59.142 43.478 6.91 0.00 39.20 3.59
2359 2872 4.326278 GTCATGTCTTAACAGCGAATCGAA 59.674 41.667 6.91 0.00 39.20 3.71
2360 2873 4.562789 TCATGTCTTAACAGCGAATCGAAG 59.437 41.667 6.91 0.29 39.20 3.79
2361 2874 2.666508 TGTCTTAACAGCGAATCGAAGC 59.333 45.455 6.91 0.00 0.00 3.86
2362 2875 2.924290 GTCTTAACAGCGAATCGAAGCT 59.076 45.455 6.91 7.46 45.74 3.74
2363 2876 3.000575 GTCTTAACAGCGAATCGAAGCTC 60.001 47.826 6.91 0.00 42.52 4.09
2364 2877 1.545759 TAACAGCGAATCGAAGCTCG 58.454 50.000 6.91 9.83 42.52 5.03
2365 2878 1.078759 AACAGCGAATCGAAGCTCGG 61.079 55.000 6.91 6.80 42.52 4.63
2366 2879 2.105128 AGCGAATCGAAGCTCGGG 59.895 61.111 6.91 0.00 39.98 5.14
2367 2880 2.202756 GCGAATCGAAGCTCGGGT 60.203 61.111 6.91 0.00 40.88 5.28
2368 2881 1.065273 GCGAATCGAAGCTCGGGTA 59.935 57.895 6.91 0.00 40.88 3.69
2369 2882 0.935366 GCGAATCGAAGCTCGGGTAG 60.935 60.000 6.91 0.00 40.88 3.18
2370 2883 0.317938 CGAATCGAAGCTCGGGTAGG 60.318 60.000 0.00 0.00 40.88 3.18
2371 2884 0.745468 GAATCGAAGCTCGGGTAGGT 59.255 55.000 0.00 0.00 40.88 3.08
2373 2886 2.062971 ATCGAAGCTCGGGTAGGTTA 57.937 50.000 0.00 0.00 45.83 2.85
2374 2887 1.386533 TCGAAGCTCGGGTAGGTTAG 58.613 55.000 5.87 0.00 45.83 2.34
2375 2888 1.101331 CGAAGCTCGGGTAGGTTAGT 58.899 55.000 0.00 0.00 45.83 2.24
2376 2889 1.475682 CGAAGCTCGGGTAGGTTAGTT 59.524 52.381 0.00 0.00 45.83 2.24
2377 2890 2.094338 CGAAGCTCGGGTAGGTTAGTTT 60.094 50.000 0.00 0.00 45.83 2.66
2378 2891 3.519579 GAAGCTCGGGTAGGTTAGTTTC 58.480 50.000 0.00 0.00 45.83 2.78
2379 2892 2.817665 AGCTCGGGTAGGTTAGTTTCT 58.182 47.619 0.00 0.00 29.36 2.52
2380 2893 2.496470 AGCTCGGGTAGGTTAGTTTCTG 59.504 50.000 0.00 0.00 29.36 3.02
2381 2894 2.418334 GCTCGGGTAGGTTAGTTTCTGG 60.418 54.545 0.00 0.00 0.00 3.86
2382 2895 2.830321 CTCGGGTAGGTTAGTTTCTGGT 59.170 50.000 0.00 0.00 0.00 4.00
2383 2896 3.242011 TCGGGTAGGTTAGTTTCTGGTT 58.758 45.455 0.00 0.00 0.00 3.67
2384 2897 3.007182 TCGGGTAGGTTAGTTTCTGGTTG 59.993 47.826 0.00 0.00 0.00 3.77
2385 2898 3.244318 CGGGTAGGTTAGTTTCTGGTTGT 60.244 47.826 0.00 0.00 0.00 3.32
2386 2899 4.070009 GGGTAGGTTAGTTTCTGGTTGTG 58.930 47.826 0.00 0.00 0.00 3.33
2387 2900 3.501062 GGTAGGTTAGTTTCTGGTTGTGC 59.499 47.826 0.00 0.00 0.00 4.57
2388 2901 2.583143 AGGTTAGTTTCTGGTTGTGCC 58.417 47.619 0.00 0.00 37.90 5.01
2389 2902 2.174854 AGGTTAGTTTCTGGTTGTGCCT 59.825 45.455 0.00 0.00 38.35 4.75
2390 2903 2.293399 GGTTAGTTTCTGGTTGTGCCTG 59.707 50.000 0.00 0.00 38.35 4.85
2391 2904 2.949644 GTTAGTTTCTGGTTGTGCCTGT 59.050 45.455 0.00 0.00 37.45 4.00
2392 2905 2.143876 AGTTTCTGGTTGTGCCTGTT 57.856 45.000 0.00 0.00 37.45 3.16
2393 2906 3.290948 AGTTTCTGGTTGTGCCTGTTA 57.709 42.857 0.00 0.00 37.45 2.41
2394 2907 3.832527 AGTTTCTGGTTGTGCCTGTTAT 58.167 40.909 0.00 0.00 37.45 1.89
2395 2908 3.569701 AGTTTCTGGTTGTGCCTGTTATG 59.430 43.478 0.00 0.00 37.45 1.90
2396 2909 1.533625 TCTGGTTGTGCCTGTTATGC 58.466 50.000 0.00 0.00 37.45 3.14
2397 2910 1.202867 TCTGGTTGTGCCTGTTATGCA 60.203 47.619 0.00 0.00 37.45 3.96
2398 2911 1.820519 CTGGTTGTGCCTGTTATGCAT 59.179 47.619 3.79 3.79 41.46 3.96
2399 2912 1.545136 TGGTTGTGCCTGTTATGCATG 59.455 47.619 10.16 0.00 41.46 4.06
2400 2913 1.818060 GGTTGTGCCTGTTATGCATGA 59.182 47.619 10.16 0.00 41.46 3.07
2401 2914 2.230992 GGTTGTGCCTGTTATGCATGAA 59.769 45.455 10.16 0.00 41.46 2.57
2402 2915 3.119029 GGTTGTGCCTGTTATGCATGAAT 60.119 43.478 10.16 0.00 41.46 2.57
2403 2916 3.786516 TGTGCCTGTTATGCATGAATG 57.213 42.857 10.16 0.00 41.46 2.67
2417 2930 4.913335 CATGAATGCATCCTACTGCTTT 57.087 40.909 0.00 0.00 42.75 3.51
2420 2933 4.548991 GAATGCATCCTACTGCTTTCAG 57.451 45.455 15.57 0.00 46.99 3.02
2432 2945 4.836125 CTGCTTTCAGTGTGGTGTAATT 57.164 40.909 0.00 0.00 35.61 1.40
2433 2946 5.186996 CTGCTTTCAGTGTGGTGTAATTT 57.813 39.130 0.00 0.00 35.61 1.82
2434 2947 6.312399 CTGCTTTCAGTGTGGTGTAATTTA 57.688 37.500 0.00 0.00 35.61 1.40
2435 2948 6.892658 TGCTTTCAGTGTGGTGTAATTTAT 57.107 33.333 0.00 0.00 0.00 1.40
2436 2949 7.283625 TGCTTTCAGTGTGGTGTAATTTATT 57.716 32.000 0.00 0.00 0.00 1.40
2437 2950 7.367285 TGCTTTCAGTGTGGTGTAATTTATTC 58.633 34.615 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 135 1.528309 CGTTTGGCTGGTGGAGGTT 60.528 57.895 0.00 0.00 0.00 3.50
132 136 2.113139 CGTTTGGCTGGTGGAGGT 59.887 61.111 0.00 0.00 0.00 3.85
167 171 4.522975 GGCCGGATTTGGGGGAGG 62.523 72.222 5.05 0.00 0.00 4.30
168 172 3.721370 CTGGCCGGATTTGGGGGAG 62.721 68.421 5.28 0.00 0.00 4.30
169 173 3.738481 CTGGCCGGATTTGGGGGA 61.738 66.667 5.28 0.00 0.00 4.81
309 620 2.111384 GTGAGGAGGATTCAGTAGGCA 58.889 52.381 0.00 0.00 0.00 4.75
314 625 0.247736 GCGTGTGAGGAGGATTCAGT 59.752 55.000 0.00 0.00 0.00 3.41
353 664 1.303561 GCAGGTGTTCTCCATGGCA 60.304 57.895 6.96 0.00 0.00 4.92
405 740 0.459237 AAGCCGTCGATCTTGAGCAG 60.459 55.000 0.00 0.00 0.00 4.24
483 818 1.000107 GGACCTCCCACTCGTACCT 60.000 63.158 0.00 0.00 34.14 3.08
635 983 5.521906 TTGATTTCATTGGACGGTTTGAA 57.478 34.783 0.00 0.00 0.00 2.69
657 1005 2.513753 TGCTGATTTCATTGGACGGTT 58.486 42.857 0.00 0.00 0.00 4.44
658 1006 2.198827 TGCTGATTTCATTGGACGGT 57.801 45.000 0.00 0.00 0.00 4.83
659 1007 2.947652 AGATGCTGATTTCATTGGACGG 59.052 45.455 0.00 0.00 0.00 4.79
660 1008 3.624410 TGAGATGCTGATTTCATTGGACG 59.376 43.478 0.00 0.00 0.00 4.79
661 1009 5.571784 TTGAGATGCTGATTTCATTGGAC 57.428 39.130 0.00 0.00 0.00 4.02
662 1010 5.126545 CCTTTGAGATGCTGATTTCATTGGA 59.873 40.000 0.00 0.00 0.00 3.53
663 1011 5.105473 ACCTTTGAGATGCTGATTTCATTGG 60.105 40.000 0.00 0.00 0.00 3.16
664 1012 5.805486 CACCTTTGAGATGCTGATTTCATTG 59.195 40.000 0.00 0.00 0.00 2.82
665 1013 5.479375 ACACCTTTGAGATGCTGATTTCATT 59.521 36.000 0.00 0.00 0.00 2.57
666 1014 5.014858 ACACCTTTGAGATGCTGATTTCAT 58.985 37.500 0.00 0.00 0.00 2.57
667 1015 4.401022 ACACCTTTGAGATGCTGATTTCA 58.599 39.130 0.00 0.00 0.00 2.69
668 1016 5.048504 TGAACACCTTTGAGATGCTGATTTC 60.049 40.000 0.00 0.00 0.00 2.17
669 1017 4.828939 TGAACACCTTTGAGATGCTGATTT 59.171 37.500 0.00 0.00 0.00 2.17
670 1018 4.401022 TGAACACCTTTGAGATGCTGATT 58.599 39.130 0.00 0.00 0.00 2.57
671 1019 4.008330 CTGAACACCTTTGAGATGCTGAT 58.992 43.478 0.00 0.00 0.00 2.90
672 1020 3.181451 ACTGAACACCTTTGAGATGCTGA 60.181 43.478 0.00 0.00 0.00 4.26
673 1021 3.144506 ACTGAACACCTTTGAGATGCTG 58.855 45.455 0.00 0.00 0.00 4.41
674 1022 3.406764 GACTGAACACCTTTGAGATGCT 58.593 45.455 0.00 0.00 0.00 3.79
829 1177 1.140375 GGTCCGTCACCGTATCACC 59.860 63.158 0.00 0.00 34.56 4.02
830 1178 4.800355 GGTCCGTCACCGTATCAC 57.200 61.111 0.00 0.00 34.56 3.06
856 1204 3.443045 GGATGGCACCGGCACTTG 61.443 66.667 0.00 0.00 41.84 3.16
1107 1455 0.439985 CGTCGAATTCAGCCACAGTG 59.560 55.000 6.22 0.00 0.00 3.66
1242 1590 3.461982 GACGTCGCTGCAGTGTCG 61.462 66.667 34.23 34.23 41.41 4.35
1269 1617 2.974148 CAGTTGTGCTGCTCGGCA 60.974 61.111 0.00 0.00 38.52 5.69
1455 1811 3.616956 TTTGGACCTCTGATAGCACTG 57.383 47.619 0.00 0.00 0.00 3.66
1456 1812 4.851639 AATTTGGACCTCTGATAGCACT 57.148 40.909 0.00 0.00 0.00 4.40
1463 1827 4.705110 TCACTGAAATTTGGACCTCTGA 57.295 40.909 0.00 0.00 0.00 3.27
1487 1851 3.991121 GACAAGCACAAAGAGAGACTACC 59.009 47.826 0.00 0.00 0.00 3.18
1497 1861 3.273919 GGCAACTAGACAAGCACAAAG 57.726 47.619 0.00 0.00 0.00 2.77
1515 1879 1.411041 ACCTACCCGAGATGTAAGGC 58.589 55.000 0.00 0.00 0.00 4.35
1520 1884 3.202595 AGAGACTAACCTACCCGAGATGT 59.797 47.826 0.00 0.00 0.00 3.06
1522 1886 3.435313 CCAGAGACTAACCTACCCGAGAT 60.435 52.174 0.00 0.00 0.00 2.75
1525 1889 1.637553 ACCAGAGACTAACCTACCCGA 59.362 52.381 0.00 0.00 0.00 5.14
1577 1964 3.073274 ACAAGTCAGGGGAACATAAGC 57.927 47.619 0.00 0.00 0.00 3.09
1581 1968 4.766891 CACATAAACAAGTCAGGGGAACAT 59.233 41.667 0.00 0.00 0.00 2.71
1646 2059 6.134055 ACTATTGTATCACCTAGTGGCAGTA 58.866 40.000 1.44 1.44 36.63 2.74
1655 2068 9.696572 AAACAGAGACTACTATTGTATCACCTA 57.303 33.333 0.00 0.00 0.00 3.08
1666 2163 9.191479 ACTACTTGCATAAACAGAGACTACTAT 57.809 33.333 0.00 0.00 0.00 2.12
1667 2164 8.577048 ACTACTTGCATAAACAGAGACTACTA 57.423 34.615 0.00 0.00 0.00 1.82
1708 2215 5.744171 AGGTTGTGCATTACATGAGTCATA 58.256 37.500 5.03 0.00 39.48 2.15
1777 2284 4.497507 GGAATAGAAATTTAGTGCCCGTGC 60.498 45.833 0.00 0.00 38.26 5.34
1785 2292 9.855021 CCAATTTTCGTGGAATAGAAATTTAGT 57.145 29.630 0.00 0.00 38.54 2.24
1846 2357 7.712797 TCCACAAGAACTAAAATTTCTTCCAC 58.287 34.615 0.00 0.00 40.59 4.02
1865 2376 5.883115 TCAGTAACAGTGAATTGTTCCACAA 59.117 36.000 0.00 0.00 42.95 3.33
1918 2431 4.589374 AGGAACGGAGGGAGTATATTCTTG 59.411 45.833 0.00 0.00 0.00 3.02
1926 2439 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
1927 2440 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
1928 2441 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
1929 2442 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
1930 2443 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
1931 2444 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
1932 2445 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1933 2446 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
1934 2447 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
1947 2460 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
1948 2461 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
1949 2462 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
1950 2463 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
1951 2464 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
1952 2465 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
1953 2466 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
1954 2467 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
1955 2468 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
1956 2469 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
1957 2470 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
1958 2471 8.367911 TGTATGTAGTCACTTGTTGAAATCTCT 58.632 33.333 0.00 0.00 35.39 3.10
1959 2472 8.534333 TGTATGTAGTCACTTGTTGAAATCTC 57.466 34.615 0.00 0.00 35.39 2.75
1960 2473 8.367911 TCTGTATGTAGTCACTTGTTGAAATCT 58.632 33.333 0.00 0.00 35.39 2.40
1961 2474 8.534333 TCTGTATGTAGTCACTTGTTGAAATC 57.466 34.615 0.00 0.00 35.39 2.17
1962 2475 7.118390 GCTCTGTATGTAGTCACTTGTTGAAAT 59.882 37.037 0.00 0.00 35.39 2.17
1963 2476 6.423905 GCTCTGTATGTAGTCACTTGTTGAAA 59.576 38.462 0.00 0.00 35.39 2.69
1964 2477 5.926542 GCTCTGTATGTAGTCACTTGTTGAA 59.073 40.000 0.00 0.00 35.39 2.69
1965 2478 5.010617 TGCTCTGTATGTAGTCACTTGTTGA 59.989 40.000 0.00 0.00 0.00 3.18
1966 2479 5.230182 TGCTCTGTATGTAGTCACTTGTTG 58.770 41.667 0.00 0.00 0.00 3.33
1967 2480 5.468540 TGCTCTGTATGTAGTCACTTGTT 57.531 39.130 0.00 0.00 0.00 2.83
1968 2481 5.468540 TTGCTCTGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 0.00 3.16
1969 2482 6.785488 TTTTGCTCTGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 0.00 3.16
1970 2483 7.161404 TCATTTTGCTCTGTATGTAGTCACTT 58.839 34.615 0.00 0.00 0.00 3.16
1971 2484 6.701340 TCATTTTGCTCTGTATGTAGTCACT 58.299 36.000 0.00 0.00 0.00 3.41
1972 2485 6.591834 ACTCATTTTGCTCTGTATGTAGTCAC 59.408 38.462 0.00 0.00 0.00 3.67
1973 2486 6.591448 CACTCATTTTGCTCTGTATGTAGTCA 59.409 38.462 0.00 0.00 0.00 3.41
1974 2487 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
1975 2488 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
1976 2489 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
1977 2490 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
1978 2491 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
1979 2492 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
1980 2493 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
1981 2494 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
1982 2495 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
1983 2496 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
1984 2497 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
1985 2498 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2011 2524 9.890629 ACATGCGGATGTATATAGACATATTTT 57.109 29.630 21.92 0.00 41.27 1.82
2014 2527 9.355916 ACTACATGCGGATGTATATAGACATAT 57.644 33.333 27.01 0.80 42.87 1.78
2015 2528 8.747538 ACTACATGCGGATGTATATAGACATA 57.252 34.615 27.01 6.00 42.87 2.29
2016 2529 7.646548 ACTACATGCGGATGTATATAGACAT 57.353 36.000 27.01 12.70 42.87 3.06
2017 2530 7.827729 ACTACTACATGCGGATGTATATAGACA 59.172 37.037 32.39 15.86 42.87 3.41
2018 2531 8.211116 ACTACTACATGCGGATGTATATAGAC 57.789 38.462 32.39 0.00 42.87 2.59
2019 2532 7.498239 GGACTACTACATGCGGATGTATATAGA 59.502 40.741 32.39 16.94 42.87 1.98
2020 2533 7.282450 TGGACTACTACATGCGGATGTATATAG 59.718 40.741 28.26 28.26 42.87 1.31
2021 2534 7.114095 TGGACTACTACATGCGGATGTATATA 58.886 38.462 27.01 20.47 42.87 0.86
2022 2535 5.949952 TGGACTACTACATGCGGATGTATAT 59.050 40.000 27.01 20.45 42.87 0.86
2023 2536 5.318630 TGGACTACTACATGCGGATGTATA 58.681 41.667 27.01 19.28 42.87 1.47
2024 2537 4.149598 TGGACTACTACATGCGGATGTAT 58.850 43.478 27.01 19.21 42.87 2.29
2025 2538 3.558033 TGGACTACTACATGCGGATGTA 58.442 45.455 25.54 25.54 41.27 2.29
2026 2539 2.384828 TGGACTACTACATGCGGATGT 58.615 47.619 26.09 26.09 45.24 3.06
2027 2540 3.667497 ATGGACTACTACATGCGGATG 57.333 47.619 16.07 16.07 35.49 3.51
2028 2541 4.100963 TCAAATGGACTACTACATGCGGAT 59.899 41.667 0.00 0.00 0.00 4.18
2029 2542 3.449377 TCAAATGGACTACTACATGCGGA 59.551 43.478 0.00 0.00 0.00 5.54
2030 2543 3.792401 TCAAATGGACTACTACATGCGG 58.208 45.455 0.00 0.00 0.00 5.69
2031 2544 5.794687 TTTCAAATGGACTACTACATGCG 57.205 39.130 0.00 0.00 0.00 4.73
2032 2545 7.497249 AGAGATTTCAAATGGACTACTACATGC 59.503 37.037 0.00 0.00 0.00 4.06
2033 2546 8.954950 AGAGATTTCAAATGGACTACTACATG 57.045 34.615 0.00 0.00 0.00 3.21
2041 2554 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2042 2555 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2060 2573 8.981659 CCCTCCATTCCTAAATATTTGTCTTTT 58.018 33.333 11.05 0.00 0.00 2.27
2061 2574 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
2062 2575 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2063 2576 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2064 2577 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2065 2578 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2066 2579 9.289782 CTTACTCCCTCCATTCCTAAATATTTG 57.710 37.037 11.05 1.40 0.00 2.32
2067 2580 9.015146 ACTTACTCCCTCCATTCCTAAATATTT 57.985 33.333 5.89 5.89 0.00 1.40
2068 2581 8.440771 CACTTACTCCCTCCATTCCTAAATATT 58.559 37.037 0.00 0.00 0.00 1.28
2069 2582 7.572861 ACACTTACTCCCTCCATTCCTAAATAT 59.427 37.037 0.00 0.00 0.00 1.28
2070 2583 6.906901 ACACTTACTCCCTCCATTCCTAAATA 59.093 38.462 0.00 0.00 0.00 1.40
2071 2584 5.731678 ACACTTACTCCCTCCATTCCTAAAT 59.268 40.000 0.00 0.00 0.00 1.40
2072 2585 5.098663 ACACTTACTCCCTCCATTCCTAAA 58.901 41.667 0.00 0.00 0.00 1.85
2073 2586 4.695606 ACACTTACTCCCTCCATTCCTAA 58.304 43.478 0.00 0.00 0.00 2.69
2074 2587 4.348020 ACACTTACTCCCTCCATTCCTA 57.652 45.455 0.00 0.00 0.00 2.94
2075 2588 3.207044 ACACTTACTCCCTCCATTCCT 57.793 47.619 0.00 0.00 0.00 3.36
2076 2589 4.470304 AGTAACACTTACTCCCTCCATTCC 59.530 45.833 0.00 0.00 42.62 3.01
2077 2590 5.187186 TCAGTAACACTTACTCCCTCCATTC 59.813 44.000 0.00 0.00 44.32 2.67
2078 2591 5.091552 TCAGTAACACTTACTCCCTCCATT 58.908 41.667 0.00 0.00 44.32 3.16
2079 2592 4.684724 TCAGTAACACTTACTCCCTCCAT 58.315 43.478 0.00 0.00 44.32 3.41
2080 2593 4.122337 TCAGTAACACTTACTCCCTCCA 57.878 45.455 0.00 0.00 44.32 3.86
2081 2594 5.479124 TTTCAGTAACACTTACTCCCTCC 57.521 43.478 0.00 0.00 44.32 4.30
2082 2595 7.123847 TCCTATTTCAGTAACACTTACTCCCTC 59.876 40.741 0.00 0.00 44.32 4.30
2083 2596 6.958192 TCCTATTTCAGTAACACTTACTCCCT 59.042 38.462 0.00 0.00 44.32 4.20
2084 2597 7.179076 TCCTATTTCAGTAACACTTACTCCC 57.821 40.000 0.00 0.00 44.32 4.30
2085 2598 8.258708 ACATCCTATTTCAGTAACACTTACTCC 58.741 37.037 0.00 0.00 44.32 3.85
2086 2599 9.654663 AACATCCTATTTCAGTAACACTTACTC 57.345 33.333 0.00 0.00 44.32 2.59
2101 2614 9.942850 CCACAAGGAATTTTAAACATCCTATTT 57.057 29.630 17.26 4.20 41.39 1.40
2102 2615 9.320295 TCCACAAGGAATTTTAAACATCCTATT 57.680 29.630 17.26 8.02 41.39 1.73
2103 2616 8.893563 TCCACAAGGAATTTTAAACATCCTAT 57.106 30.769 17.26 9.19 41.39 2.57
2119 2632 2.917933 CTGTGAGTTGTTCCACAAGGA 58.082 47.619 0.00 0.00 42.00 3.36
2120 2633 1.334869 GCTGTGAGTTGTTCCACAAGG 59.665 52.381 0.00 0.00 42.00 3.61
2121 2634 2.032550 CAGCTGTGAGTTGTTCCACAAG 59.967 50.000 5.25 0.00 42.00 3.16
2122 2635 2.016318 CAGCTGTGAGTTGTTCCACAA 58.984 47.619 5.25 0.00 42.00 3.33
2123 2636 1.667236 CAGCTGTGAGTTGTTCCACA 58.333 50.000 5.25 0.00 40.56 4.17
2124 2637 0.947244 CCAGCTGTGAGTTGTTCCAC 59.053 55.000 13.81 0.00 0.00 4.02
2125 2638 0.546122 ACCAGCTGTGAGTTGTTCCA 59.454 50.000 13.81 0.00 0.00 3.53
2126 2639 1.604278 GAACCAGCTGTGAGTTGTTCC 59.396 52.381 13.81 0.08 0.00 3.62
2127 2640 2.289002 CAGAACCAGCTGTGAGTTGTTC 59.711 50.000 18.16 18.16 0.00 3.18
2128 2641 2.092968 TCAGAACCAGCTGTGAGTTGTT 60.093 45.455 13.81 8.23 37.20 2.83
2129 2642 1.486310 TCAGAACCAGCTGTGAGTTGT 59.514 47.619 13.81 5.58 37.20 3.32
2130 2643 2.245159 TCAGAACCAGCTGTGAGTTG 57.755 50.000 13.81 4.67 37.20 3.16
2131 2644 2.565841 GTTCAGAACCAGCTGTGAGTT 58.434 47.619 13.81 9.78 37.20 3.01
2132 2645 2.246719 GTTCAGAACCAGCTGTGAGT 57.753 50.000 13.81 0.00 37.20 3.41
2156 2669 6.230472 TGAGAGACTGCAGCACTTATAAAAA 58.770 36.000 15.27 0.00 0.00 1.94
2157 2670 5.793817 TGAGAGACTGCAGCACTTATAAAA 58.206 37.500 15.27 0.00 0.00 1.52
2158 2671 5.405935 TGAGAGACTGCAGCACTTATAAA 57.594 39.130 15.27 0.00 0.00 1.40
2159 2672 5.354767 CATGAGAGACTGCAGCACTTATAA 58.645 41.667 15.27 0.94 0.00 0.98
2160 2673 4.202192 CCATGAGAGACTGCAGCACTTATA 60.202 45.833 15.27 4.62 0.00 0.98
2161 2674 3.431905 CCATGAGAGACTGCAGCACTTAT 60.432 47.826 15.27 9.88 0.00 1.73
2162 2675 2.093816 CCATGAGAGACTGCAGCACTTA 60.094 50.000 15.27 7.91 0.00 2.24
2163 2676 1.338864 CCATGAGAGACTGCAGCACTT 60.339 52.381 15.27 4.99 0.00 3.16
2164 2677 0.249676 CCATGAGAGACTGCAGCACT 59.750 55.000 15.27 13.80 0.00 4.40
2165 2678 0.036577 ACCATGAGAGACTGCAGCAC 60.037 55.000 15.27 8.60 0.00 4.40
2166 2679 0.689055 AACCATGAGAGACTGCAGCA 59.311 50.000 15.27 3.14 0.00 4.41
2167 2680 1.085091 CAACCATGAGAGACTGCAGC 58.915 55.000 15.27 6.85 0.00 5.25
2168 2681 1.085091 GCAACCATGAGAGACTGCAG 58.915 55.000 13.48 13.48 0.00 4.41
2169 2682 0.689055 AGCAACCATGAGAGACTGCA 59.311 50.000 0.00 0.00 32.21 4.41
2170 2683 1.085091 CAGCAACCATGAGAGACTGC 58.915 55.000 0.00 0.00 0.00 4.40
2171 2684 2.469274 ACAGCAACCATGAGAGACTG 57.531 50.000 0.00 0.00 0.00 3.51
2172 2685 2.775890 CAACAGCAACCATGAGAGACT 58.224 47.619 0.00 0.00 0.00 3.24
2173 2686 1.198637 GCAACAGCAACCATGAGAGAC 59.801 52.381 0.00 0.00 0.00 3.36
2174 2687 1.527034 GCAACAGCAACCATGAGAGA 58.473 50.000 0.00 0.00 0.00 3.10
2175 2688 0.524862 GGCAACAGCAACCATGAGAG 59.475 55.000 0.00 0.00 0.00 3.20
2176 2689 0.111061 AGGCAACAGCAACCATGAGA 59.889 50.000 0.00 0.00 41.41 3.27
2177 2690 0.242825 CAGGCAACAGCAACCATGAG 59.757 55.000 0.00 0.00 41.41 2.90
2178 2691 0.178995 TCAGGCAACAGCAACCATGA 60.179 50.000 0.00 0.00 41.41 3.07
2179 2692 0.675083 TTCAGGCAACAGCAACCATG 59.325 50.000 0.00 0.00 41.41 3.66
2180 2693 1.636148 ATTCAGGCAACAGCAACCAT 58.364 45.000 0.00 0.00 41.41 3.55
2181 2694 2.284754 TATTCAGGCAACAGCAACCA 57.715 45.000 0.00 0.00 41.41 3.67
2182 2695 3.874392 AATATTCAGGCAACAGCAACC 57.126 42.857 0.00 0.00 41.41 3.77
2183 2696 7.832503 AAAATAATATTCAGGCAACAGCAAC 57.167 32.000 0.00 0.00 41.41 4.17
2205 2718 7.920682 GGAAGTCAAAGTCATAAAGCAGAAAAA 59.079 33.333 0.00 0.00 0.00 1.94
2206 2719 7.425606 GGAAGTCAAAGTCATAAAGCAGAAAA 58.574 34.615 0.00 0.00 0.00 2.29
2207 2720 6.293407 CGGAAGTCAAAGTCATAAAGCAGAAA 60.293 38.462 0.00 0.00 0.00 2.52
2208 2721 5.179368 CGGAAGTCAAAGTCATAAAGCAGAA 59.821 40.000 0.00 0.00 0.00 3.02
2209 2722 4.690748 CGGAAGTCAAAGTCATAAAGCAGA 59.309 41.667 0.00 0.00 0.00 4.26
2210 2723 4.690748 TCGGAAGTCAAAGTCATAAAGCAG 59.309 41.667 0.00 0.00 0.00 4.24
2211 2724 4.637276 TCGGAAGTCAAAGTCATAAAGCA 58.363 39.130 0.00 0.00 0.00 3.91
2212 2725 4.691216 ACTCGGAAGTCAAAGTCATAAAGC 59.309 41.667 0.00 0.00 0.00 3.51
2235 2748 4.735132 CTTTCTCCCACGCGCCGA 62.735 66.667 5.73 0.00 0.00 5.54
2236 2749 4.735132 TCTTTCTCCCACGCGCCG 62.735 66.667 5.73 0.00 0.00 6.46
2237 2750 2.358247 TTCTTTCTCCCACGCGCC 60.358 61.111 5.73 0.00 0.00 6.53
2238 2751 1.668151 AGTTCTTTCTCCCACGCGC 60.668 57.895 5.73 0.00 0.00 6.86
2239 2752 0.319555 TCAGTTCTTTCTCCCACGCG 60.320 55.000 3.53 3.53 0.00 6.01
2240 2753 2.100605 ATCAGTTCTTTCTCCCACGC 57.899 50.000 0.00 0.00 0.00 5.34
2241 2754 3.664107 TGAATCAGTTCTTTCTCCCACG 58.336 45.455 0.00 0.00 35.33 4.94
2242 2755 6.410540 ACTATGAATCAGTTCTTTCTCCCAC 58.589 40.000 0.00 0.00 35.33 4.61
2243 2756 6.627087 ACTATGAATCAGTTCTTTCTCCCA 57.373 37.500 0.00 0.00 35.33 4.37
2244 2757 9.103861 CTTAACTATGAATCAGTTCTTTCTCCC 57.896 37.037 0.00 0.00 37.42 4.30
2245 2758 9.660180 ACTTAACTATGAATCAGTTCTTTCTCC 57.340 33.333 0.00 0.00 37.42 3.71
2247 2760 8.940952 GCACTTAACTATGAATCAGTTCTTTCT 58.059 33.333 0.00 0.00 37.42 2.52
2248 2761 8.940952 AGCACTTAACTATGAATCAGTTCTTTC 58.059 33.333 0.00 0.00 37.42 2.62
2249 2762 8.854614 AGCACTTAACTATGAATCAGTTCTTT 57.145 30.769 0.00 0.00 37.42 2.52
2250 2763 9.372369 GTAGCACTTAACTATGAATCAGTTCTT 57.628 33.333 0.00 0.00 37.42 2.52
2251 2764 8.754080 AGTAGCACTTAACTATGAATCAGTTCT 58.246 33.333 0.00 0.00 37.42 3.01
2252 2765 8.934507 AGTAGCACTTAACTATGAATCAGTTC 57.065 34.615 0.00 0.00 37.42 3.01
2254 2767 9.409918 TCTAGTAGCACTTAACTATGAATCAGT 57.590 33.333 0.00 0.00 0.00 3.41
2255 2768 9.891828 CTCTAGTAGCACTTAACTATGAATCAG 57.108 37.037 0.00 0.00 0.00 2.90
2256 2769 8.851145 CCTCTAGTAGCACTTAACTATGAATCA 58.149 37.037 0.00 0.00 0.00 2.57
2257 2770 8.852135 ACCTCTAGTAGCACTTAACTATGAATC 58.148 37.037 0.00 0.00 0.00 2.52
2258 2771 8.770010 ACCTCTAGTAGCACTTAACTATGAAT 57.230 34.615 0.00 0.00 0.00 2.57
2259 2772 8.053963 AGACCTCTAGTAGCACTTAACTATGAA 58.946 37.037 0.00 0.00 0.00 2.57
2260 2773 7.575505 AGACCTCTAGTAGCACTTAACTATGA 58.424 38.462 0.00 0.00 0.00 2.15
2261 2774 7.811117 AGACCTCTAGTAGCACTTAACTATG 57.189 40.000 0.00 0.00 0.00 2.23
2262 2775 9.917887 TTTAGACCTCTAGTAGCACTTAACTAT 57.082 33.333 0.00 0.00 0.00 2.12
2263 2776 9.917887 ATTTAGACCTCTAGTAGCACTTAACTA 57.082 33.333 0.00 0.00 0.00 2.24
2264 2777 8.826293 ATTTAGACCTCTAGTAGCACTTAACT 57.174 34.615 0.00 0.00 0.00 2.24
2265 2778 9.872721 AAATTTAGACCTCTAGTAGCACTTAAC 57.127 33.333 0.00 0.00 0.00 2.01
2267 2780 9.251440 TGAAATTTAGACCTCTAGTAGCACTTA 57.749 33.333 0.00 0.00 0.00 2.24
2268 2781 8.135382 TGAAATTTAGACCTCTAGTAGCACTT 57.865 34.615 0.00 0.00 0.00 3.16
2269 2782 7.719871 TGAAATTTAGACCTCTAGTAGCACT 57.280 36.000 0.00 0.00 0.00 4.40
2270 2783 8.821894 CATTGAAATTTAGACCTCTAGTAGCAC 58.178 37.037 0.00 0.00 0.00 4.40
2271 2784 8.758829 TCATTGAAATTTAGACCTCTAGTAGCA 58.241 33.333 0.00 0.00 0.00 3.49
2272 2785 9.771534 ATCATTGAAATTTAGACCTCTAGTAGC 57.228 33.333 0.00 0.00 0.00 3.58
2275 2788 9.388506 CACATCATTGAAATTTAGACCTCTAGT 57.611 33.333 0.00 0.00 0.00 2.57
2276 2789 9.388506 ACACATCATTGAAATTTAGACCTCTAG 57.611 33.333 0.00 0.00 0.00 2.43
2277 2790 9.166173 CACACATCATTGAAATTTAGACCTCTA 57.834 33.333 0.00 0.00 0.00 2.43
2278 2791 7.121759 CCACACATCATTGAAATTTAGACCTCT 59.878 37.037 0.00 0.00 0.00 3.69
2279 2792 7.094205 ACCACACATCATTGAAATTTAGACCTC 60.094 37.037 0.00 0.00 0.00 3.85
2280 2793 6.721208 ACCACACATCATTGAAATTTAGACCT 59.279 34.615 0.00 0.00 0.00 3.85
2281 2794 6.924111 ACCACACATCATTGAAATTTAGACC 58.076 36.000 0.00 0.00 0.00 3.85
2282 2795 7.820648 AGACCACACATCATTGAAATTTAGAC 58.179 34.615 0.00 0.00 0.00 2.59
2283 2796 7.884877 AGAGACCACACATCATTGAAATTTAGA 59.115 33.333 0.00 0.00 0.00 2.10
2284 2797 7.966753 CAGAGACCACACATCATTGAAATTTAG 59.033 37.037 0.00 0.00 0.00 1.85
2285 2798 7.448161 ACAGAGACCACACATCATTGAAATTTA 59.552 33.333 0.00 0.00 0.00 1.40
2286 2799 6.266103 ACAGAGACCACACATCATTGAAATTT 59.734 34.615 0.00 0.00 0.00 1.82
2287 2800 5.771666 ACAGAGACCACACATCATTGAAATT 59.228 36.000 0.00 0.00 0.00 1.82
2288 2801 5.319453 ACAGAGACCACACATCATTGAAAT 58.681 37.500 0.00 0.00 0.00 2.17
2289 2802 4.717877 ACAGAGACCACACATCATTGAAA 58.282 39.130 0.00 0.00 0.00 2.69
2290 2803 4.040829 AGACAGAGACCACACATCATTGAA 59.959 41.667 0.00 0.00 0.00 2.69
2291 2804 3.580022 AGACAGAGACCACACATCATTGA 59.420 43.478 0.00 0.00 0.00 2.57
2292 2805 3.683340 CAGACAGAGACCACACATCATTG 59.317 47.826 0.00 0.00 0.00 2.82
2293 2806 3.326006 ACAGACAGAGACCACACATCATT 59.674 43.478 0.00 0.00 0.00 2.57
2294 2807 2.902486 ACAGACAGAGACCACACATCAT 59.098 45.455 0.00 0.00 0.00 2.45
2295 2808 2.036346 CACAGACAGAGACCACACATCA 59.964 50.000 0.00 0.00 0.00 3.07
2296 2809 2.681706 CACAGACAGAGACCACACATC 58.318 52.381 0.00 0.00 0.00 3.06
2297 2810 1.270518 GCACAGACAGAGACCACACAT 60.271 52.381 0.00 0.00 0.00 3.21
2298 2811 0.104855 GCACAGACAGAGACCACACA 59.895 55.000 0.00 0.00 0.00 3.72
2299 2812 0.390860 AGCACAGACAGAGACCACAC 59.609 55.000 0.00 0.00 0.00 3.82
2300 2813 1.123077 AAGCACAGACAGAGACCACA 58.877 50.000 0.00 0.00 0.00 4.17
2301 2814 2.246719 AAAGCACAGACAGAGACCAC 57.753 50.000 0.00 0.00 0.00 4.16
2302 2815 2.435805 AGAAAAGCACAGACAGAGACCA 59.564 45.455 0.00 0.00 0.00 4.02
2303 2816 3.118905 AGAAAAGCACAGACAGAGACC 57.881 47.619 0.00 0.00 0.00 3.85
2304 2817 4.877282 ACTAGAAAAGCACAGACAGAGAC 58.123 43.478 0.00 0.00 0.00 3.36
2305 2818 5.537300 AACTAGAAAAGCACAGACAGAGA 57.463 39.130 0.00 0.00 0.00 3.10
2306 2819 7.439655 AGTTTAACTAGAAAAGCACAGACAGAG 59.560 37.037 0.00 0.00 0.00 3.35
2307 2820 7.272978 AGTTTAACTAGAAAAGCACAGACAGA 58.727 34.615 0.00 0.00 0.00 3.41
2308 2821 7.484035 AGTTTAACTAGAAAAGCACAGACAG 57.516 36.000 0.00 0.00 0.00 3.51
2309 2822 7.335924 ACAAGTTTAACTAGAAAAGCACAGACA 59.664 33.333 0.00 0.00 0.00 3.41
2310 2823 7.640240 CACAAGTTTAACTAGAAAAGCACAGAC 59.360 37.037 0.00 0.00 0.00 3.51
2311 2824 7.335924 ACACAAGTTTAACTAGAAAAGCACAGA 59.664 33.333 0.00 0.00 0.00 3.41
2312 2825 7.472543 ACACAAGTTTAACTAGAAAAGCACAG 58.527 34.615 0.00 0.00 0.00 3.66
2313 2826 7.119992 TGACACAAGTTTAACTAGAAAAGCACA 59.880 33.333 0.00 0.00 0.00 4.57
2314 2827 7.469260 TGACACAAGTTTAACTAGAAAAGCAC 58.531 34.615 0.00 0.00 0.00 4.40
2315 2828 7.618502 TGACACAAGTTTAACTAGAAAAGCA 57.381 32.000 0.00 0.00 0.00 3.91
2316 2829 8.129211 ACATGACACAAGTTTAACTAGAAAAGC 58.871 33.333 0.00 0.00 0.00 3.51
2317 2830 9.651718 GACATGACACAAGTTTAACTAGAAAAG 57.348 33.333 0.00 0.00 0.00 2.27
2318 2831 9.391006 AGACATGACACAAGTTTAACTAGAAAA 57.609 29.630 0.00 0.00 0.00 2.29
2319 2832 8.958119 AGACATGACACAAGTTTAACTAGAAA 57.042 30.769 0.00 0.00 0.00 2.52
2320 2833 8.958119 AAGACATGACACAAGTTTAACTAGAA 57.042 30.769 0.00 0.00 0.00 2.10
2323 2836 9.602568 TGTTAAGACATGACACAAGTTTAACTA 57.397 29.630 0.00 0.00 33.32 2.24
2324 2837 8.500753 TGTTAAGACATGACACAAGTTTAACT 57.499 30.769 0.00 0.00 33.32 2.24
2325 2838 7.376072 GCTGTTAAGACATGACACAAGTTTAAC 59.624 37.037 0.00 4.36 34.72 2.01
2326 2839 7.414436 GCTGTTAAGACATGACACAAGTTTAA 58.586 34.615 0.00 0.00 34.72 1.52
2327 2840 6.292649 CGCTGTTAAGACATGACACAAGTTTA 60.293 38.462 0.00 0.00 34.72 2.01
2328 2841 5.504010 CGCTGTTAAGACATGACACAAGTTT 60.504 40.000 0.00 0.00 34.72 2.66
2329 2842 4.024893 CGCTGTTAAGACATGACACAAGTT 60.025 41.667 0.00 0.00 34.72 2.66
2330 2843 3.494626 CGCTGTTAAGACATGACACAAGT 59.505 43.478 0.00 0.00 34.72 3.16
2331 2844 3.740832 TCGCTGTTAAGACATGACACAAG 59.259 43.478 0.00 0.00 34.72 3.16
2332 2845 3.723260 TCGCTGTTAAGACATGACACAA 58.277 40.909 0.00 0.00 34.72 3.33
2333 2846 3.378911 TCGCTGTTAAGACATGACACA 57.621 42.857 0.00 0.00 34.72 3.72
2334 2847 4.490959 CGATTCGCTGTTAAGACATGACAC 60.491 45.833 0.00 0.00 34.72 3.67
2335 2848 3.612423 CGATTCGCTGTTAAGACATGACA 59.388 43.478 0.00 0.00 34.72 3.58
2336 2849 3.857665 TCGATTCGCTGTTAAGACATGAC 59.142 43.478 0.00 0.00 34.72 3.06
2337 2850 4.104696 TCGATTCGCTGTTAAGACATGA 57.895 40.909 0.00 0.00 34.72 3.07
2338 2851 4.780324 GCTTCGATTCGCTGTTAAGACATG 60.780 45.833 0.00 0.00 34.72 3.21
2339 2852 3.307242 GCTTCGATTCGCTGTTAAGACAT 59.693 43.478 0.00 0.00 34.72 3.06
2340 2853 2.666508 GCTTCGATTCGCTGTTAAGACA 59.333 45.455 0.00 0.00 0.00 3.41
2341 2854 2.924290 AGCTTCGATTCGCTGTTAAGAC 59.076 45.455 0.00 0.00 34.69 3.01
2342 2855 3.179830 GAGCTTCGATTCGCTGTTAAGA 58.820 45.455 8.81 0.00 36.45 2.10
2343 2856 2.035342 CGAGCTTCGATTCGCTGTTAAG 60.035 50.000 8.81 0.79 43.74 1.85
2344 2857 1.917955 CGAGCTTCGATTCGCTGTTAA 59.082 47.619 8.81 0.00 43.74 2.01
2345 2858 1.545759 CGAGCTTCGATTCGCTGTTA 58.454 50.000 8.81 0.00 43.74 2.41
2346 2859 1.078759 CCGAGCTTCGATTCGCTGTT 61.079 55.000 8.81 0.00 43.74 3.16
2347 2860 1.517257 CCGAGCTTCGATTCGCTGT 60.517 57.895 8.81 0.00 43.74 4.40
2348 2861 2.233654 CCCGAGCTTCGATTCGCTG 61.234 63.158 8.81 0.00 43.74 5.18
2349 2862 1.381928 TACCCGAGCTTCGATTCGCT 61.382 55.000 0.00 4.33 43.74 4.93
2350 2863 0.935366 CTACCCGAGCTTCGATTCGC 60.935 60.000 0.00 2.10 43.74 4.70
2351 2864 0.317938 CCTACCCGAGCTTCGATTCG 60.318 60.000 0.00 0.00 43.74 3.34
2352 2865 0.745468 ACCTACCCGAGCTTCGATTC 59.255 55.000 7.07 0.00 43.74 2.52
2353 2866 1.192428 AACCTACCCGAGCTTCGATT 58.808 50.000 7.07 0.00 43.74 3.34
2354 2867 1.955080 CTAACCTACCCGAGCTTCGAT 59.045 52.381 7.07 0.00 43.74 3.59
2355 2868 1.340405 ACTAACCTACCCGAGCTTCGA 60.340 52.381 7.07 0.00 43.74 3.71
2356 2869 1.101331 ACTAACCTACCCGAGCTTCG 58.899 55.000 0.00 0.00 40.07 3.79
2357 2870 3.195182 AGAAACTAACCTACCCGAGCTTC 59.805 47.826 0.00 0.00 0.00 3.86
2358 2871 3.056035 CAGAAACTAACCTACCCGAGCTT 60.056 47.826 0.00 0.00 0.00 3.74
2359 2872 2.496470 CAGAAACTAACCTACCCGAGCT 59.504 50.000 0.00 0.00 0.00 4.09
2360 2873 2.418334 CCAGAAACTAACCTACCCGAGC 60.418 54.545 0.00 0.00 0.00 5.03
2361 2874 2.830321 ACCAGAAACTAACCTACCCGAG 59.170 50.000 0.00 0.00 0.00 4.63
2362 2875 2.893424 ACCAGAAACTAACCTACCCGA 58.107 47.619 0.00 0.00 0.00 5.14
2363 2876 3.244318 ACAACCAGAAACTAACCTACCCG 60.244 47.826 0.00 0.00 0.00 5.28
2364 2877 4.070009 CACAACCAGAAACTAACCTACCC 58.930 47.826 0.00 0.00 0.00 3.69
2365 2878 3.501062 GCACAACCAGAAACTAACCTACC 59.499 47.826 0.00 0.00 0.00 3.18
2366 2879 3.501062 GGCACAACCAGAAACTAACCTAC 59.499 47.826 0.00 0.00 38.86 3.18
2367 2880 3.393278 AGGCACAACCAGAAACTAACCTA 59.607 43.478 0.00 0.00 43.14 3.08
2368 2881 2.174854 AGGCACAACCAGAAACTAACCT 59.825 45.455 0.00 0.00 43.14 3.50
2369 2882 2.293399 CAGGCACAACCAGAAACTAACC 59.707 50.000 0.00 0.00 43.14 2.85
2370 2883 2.949644 ACAGGCACAACCAGAAACTAAC 59.050 45.455 0.00 0.00 43.14 2.34
2371 2884 3.290948 ACAGGCACAACCAGAAACTAA 57.709 42.857 0.00 0.00 43.14 2.24
2372 2885 3.290948 AACAGGCACAACCAGAAACTA 57.709 42.857 0.00 0.00 43.14 2.24
2373 2886 2.143876 AACAGGCACAACCAGAAACT 57.856 45.000 0.00 0.00 43.14 2.66
2374 2887 3.857010 GCATAACAGGCACAACCAGAAAC 60.857 47.826 0.00 0.00 43.14 2.78
2375 2888 2.295909 GCATAACAGGCACAACCAGAAA 59.704 45.455 0.00 0.00 43.14 2.52
2376 2889 1.885887 GCATAACAGGCACAACCAGAA 59.114 47.619 0.00 0.00 43.14 3.02
2377 2890 1.202867 TGCATAACAGGCACAACCAGA 60.203 47.619 0.00 0.00 43.14 3.86
2378 2891 1.246649 TGCATAACAGGCACAACCAG 58.753 50.000 0.00 0.00 43.14 4.00
2379 2892 1.545136 CATGCATAACAGGCACAACCA 59.455 47.619 0.00 0.00 45.23 3.67
2380 2893 1.818060 TCATGCATAACAGGCACAACC 59.182 47.619 0.00 0.00 45.23 3.77
2381 2894 3.574284 TTCATGCATAACAGGCACAAC 57.426 42.857 0.00 0.00 45.23 3.32
2382 2895 4.112716 CATTCATGCATAACAGGCACAA 57.887 40.909 0.00 0.00 45.23 3.33
2383 2896 3.786516 CATTCATGCATAACAGGCACA 57.213 42.857 0.00 0.00 45.23 4.57
2412 2925 6.892658 ATAAATTACACCACACTGAAAGCA 57.107 33.333 0.00 0.00 37.60 3.91
2413 2926 7.796958 GAATAAATTACACCACACTGAAAGC 57.203 36.000 0.00 0.00 37.60 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.