Multiple sequence alignment - TraesCS7A01G469800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G469800 chr7A 100.000 7725 0 0 1 7725 666190827 666183103 0.000000e+00 14266
1 TraesCS7A01G469800 chr7D 90.782 2940 176 44 4833 7723 575682162 575679269 0.000000e+00 3840
2 TraesCS7A01G469800 chr7D 89.841 1949 111 39 1 1937 575686797 575684924 0.000000e+00 2422
3 TraesCS7A01G469800 chr7D 92.231 798 48 9 3635 4420 575683449 575682654 0.000000e+00 1118
4 TraesCS7A01G469800 chr7D 94.454 595 22 8 1978 2563 575684917 575684325 0.000000e+00 905
5 TraesCS7A01G469800 chr7D 95.630 389 17 0 3201 3589 575683842 575683454 6.580000e-175 625
6 TraesCS7A01G469800 chr7D 91.627 418 33 2 4406 4821 575682639 575682222 1.870000e-160 577
7 TraesCS7A01G469800 chr7D 87.627 493 38 17 2682 3170 575684315 575683842 1.130000e-152 551
8 TraesCS7A01G469800 chr7B 87.122 2182 214 35 2661 4821 637773244 637771109 0.000000e+00 2410
9 TraesCS7A01G469800 chr7B 88.928 1725 125 36 5827 7524 637769949 637768264 0.000000e+00 2067
10 TraesCS7A01G469800 chr7B 90.959 1283 71 20 659 1933 637775091 637773846 0.000000e+00 1685
11 TraesCS7A01G469800 chr7B 86.702 940 99 16 4882 5811 637770991 637770068 0.000000e+00 1020
12 TraesCS7A01G469800 chr7B 94.137 597 25 2 1978 2564 637773839 637773243 0.000000e+00 900
13 TraesCS7A01G469800 chr7B 80.719 612 68 25 1 585 637777451 637776863 1.540000e-116 431
14 TraesCS7A01G469800 chr7B 93.953 215 13 0 7509 7723 637768246 637768032 7.480000e-85 326
15 TraesCS7A01G469800 chr7B 90.957 188 14 3 7537 7723 637248210 637248025 4.630000e-62 250
16 TraesCS7A01G469800 chr7B 97.000 100 3 0 2563 2662 744290687 744290786 1.330000e-37 169
17 TraesCS7A01G469800 chr2D 80.488 328 34 18 2779 3098 130833393 130833698 2.810000e-54 224
18 TraesCS7A01G469800 chr2D 96.117 103 4 0 2562 2664 107204079 107204181 1.330000e-37 169
19 TraesCS7A01G469800 chr2D 93.333 105 4 3 7619 7723 106265522 106265421 1.340000e-32 152
20 TraesCS7A01G469800 chr3B 82.716 243 37 4 3235 3472 825764607 825764849 2.180000e-50 211
21 TraesCS7A01G469800 chr5D 98.980 98 1 0 2562 2659 395728107 395728204 7.970000e-40 176
22 TraesCS7A01G469800 chr3A 94.737 114 4 2 2563 2674 674735103 674735216 7.970000e-40 176
23 TraesCS7A01G469800 chr3A 94.949 99 4 1 7618 7716 682987733 682987830 3.730000e-33 154
24 TraesCS7A01G469800 chr3A 87.000 100 13 0 1000 1099 38316581 38316680 6.340000e-21 113
25 TraesCS7A01G469800 chr4B 98.000 100 2 0 2563 2662 216814998 216815097 2.870000e-39 174
26 TraesCS7A01G469800 chr2B 97.980 99 2 0 2563 2661 629108629 629108531 1.030000e-38 172
27 TraesCS7A01G469800 chr2B 94.545 110 5 1 2556 2664 440223760 440223869 1.330000e-37 169
28 TraesCS7A01G469800 chr2B 90.244 123 9 3 2563 2682 270234130 270234252 2.890000e-34 158
29 TraesCS7A01G469800 chr2B 93.204 103 5 2 7621 7723 154906980 154906880 4.830000e-32 150
30 TraesCS7A01G469800 chr1A 95.370 108 5 0 2554 2661 189714901 189715008 1.030000e-38 172
31 TraesCS7A01G469800 chr5B 91.667 108 7 2 7618 7725 13224178 13224283 1.740000e-31 148
32 TraesCS7A01G469800 chr1D 93.204 103 4 3 7621 7723 478274027 478273928 1.740000e-31 148
33 TraesCS7A01G469800 chr2A 90.991 111 6 4 7613 7723 102325396 102325290 6.250000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G469800 chr7A 666183103 666190827 7724 True 14266.000000 14266 100.000000 1 7725 1 chr7A.!!$R1 7724
1 TraesCS7A01G469800 chr7D 575679269 575686797 7528 True 1434.000000 3840 91.741714 1 7723 7 chr7D.!!$R1 7722
2 TraesCS7A01G469800 chr7B 637768032 637777451 9419 True 1262.714286 2410 88.931429 1 7723 7 chr7B.!!$R2 7722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 685 0.179179 GCATGAAGAACTTGCTCGGC 60.179 55.000 0.00 0.00 43.40 5.54 F
1455 3216 0.179045 GTCGCCATCTTAGGGTGCAT 60.179 55.000 0.00 0.00 35.87 3.96 F
1923 3690 0.029433 TATGTTTTTGTGTGCGCGCA 59.971 45.000 33.09 33.09 0.00 6.09 F
2855 4636 0.036732 AACCTGAGCTGCCAATTCGA 59.963 50.000 0.00 0.00 0.00 3.71 F
2885 4666 0.189574 TTGGCTTGGTTTCCATGGGA 59.810 50.000 13.02 0.00 31.53 4.37 F
3643 5432 0.248907 GTACATTCGCGCTGCCTCTA 60.249 55.000 5.56 0.00 0.00 2.43 F
3644 5433 0.248907 TACATTCGCGCTGCCTCTAC 60.249 55.000 5.56 0.00 0.00 2.59 F
4685 6514 0.037975 GCTTGATGCCCAACAACTGG 60.038 55.000 0.00 0.00 45.97 4.00 F
5694 7606 1.074405 ACTTTTGGAGCATGCTGAGGA 59.926 47.619 28.27 5.58 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1464 3225 0.179037 GCACCAGGCATCAGATAGCA 60.179 55.000 7.02 0.00 43.97 3.49 R
2370 4139 0.617413 ATCAACCTCTCACCAGCCAG 59.383 55.000 0.00 0.00 0.00 4.85 R
3624 5413 0.248907 TAGAGGCAGCGCGAATGTAC 60.249 55.000 12.10 5.42 0.00 2.90 R
4347 6146 0.256752 TCTGTTGGCATCCCTCATGG 59.743 55.000 0.00 0.00 32.37 3.66 R
4456 6284 1.046204 AGCCATTAGGTACGCCCTAC 58.954 55.000 1.07 0.00 45.82 3.18 R
4465 6293 1.133792 GTGCATGGGTAGCCATTAGGT 60.134 52.381 23.84 0.24 37.19 3.08 R
4921 6816 1.135315 CGTTCGCATGCCTCCTTTG 59.865 57.895 13.15 0.00 0.00 2.77 R
5800 7712 0.248458 AAGTGGCAGAAAAACGTGCG 60.248 50.000 0.00 0.00 40.82 5.34 R
6965 9005 0.108186 ATGTTCGCGGCAGATGAGAA 60.108 50.000 6.13 0.00 0.00 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 0.396811 GGAACTATCCCATCCCACCG 59.603 60.000 0.00 0.00 40.10 4.94
58 59 0.250338 GAACTATCCCATCCCACCGC 60.250 60.000 0.00 0.00 0.00 5.68
102 103 6.824196 TGGTTTCTATTTATACACCATTGCGA 59.176 34.615 0.00 0.00 29.11 5.10
106 107 9.729023 TTTCTATTTATACACCATTGCGATTTG 57.271 29.630 0.00 0.00 0.00 2.32
117 118 3.973206 TTGCGATTTGTAGGGAAGAGA 57.027 42.857 0.00 0.00 0.00 3.10
132 133 0.990374 AGAGAAAGGGCAGTGATGCT 59.010 50.000 0.00 0.00 34.73 3.79
236 237 5.453057 CCATGCTAGTGCTCTTCTATGAGTT 60.453 44.000 0.00 0.00 40.48 3.01
244 245 4.222810 TGCTCTTCTATGAGTTGCACCTTA 59.777 41.667 0.00 0.00 36.51 2.69
253 254 3.008923 TGAGTTGCACCTTATGTCCATGA 59.991 43.478 0.00 0.00 0.00 3.07
305 328 6.931281 CCTTTCGATTCATGGTCTGTATGTAT 59.069 38.462 0.00 0.00 0.00 2.29
307 330 7.946655 TTCGATTCATGGTCTGTATGTATTC 57.053 36.000 0.00 0.00 0.00 1.75
443 468 5.460646 TCTCGAAGCAAAATTTGGATTGAC 58.539 37.500 0.00 0.00 0.00 3.18
445 470 6.429692 TCTCGAAGCAAAATTTGGATTGACTA 59.570 34.615 0.00 0.00 0.00 2.59
446 471 6.378582 TCGAAGCAAAATTTGGATTGACTAC 58.621 36.000 0.00 0.00 0.00 2.73
447 472 5.572896 CGAAGCAAAATTTGGATTGACTACC 59.427 40.000 0.00 0.00 0.00 3.18
465 490 9.834628 TTGACTACCAAATAATTTGAATCGAAC 57.165 29.630 0.00 0.00 43.26 3.95
502 527 1.697982 ACCGAGCTAACTCAACCCTTT 59.302 47.619 0.00 0.00 43.66 3.11
512 537 5.352643 AACTCAACCCTTTTTACGATTCG 57.647 39.130 4.14 4.14 0.00 3.34
513 538 4.634199 ACTCAACCCTTTTTACGATTCGA 58.366 39.130 13.95 0.00 0.00 3.71
514 539 4.689345 ACTCAACCCTTTTTACGATTCGAG 59.311 41.667 13.95 0.00 0.00 4.04
515 540 4.885413 TCAACCCTTTTTACGATTCGAGA 58.115 39.130 13.95 0.00 0.00 4.04
516 541 4.687483 TCAACCCTTTTTACGATTCGAGAC 59.313 41.667 13.95 0.00 0.00 3.36
521 550 6.077838 CCCTTTTTACGATTCGAGACAAAAG 58.922 40.000 13.95 17.21 0.00 2.27
530 559 6.258068 ACGATTCGAGACAAAAGAAAACTCTT 59.742 34.615 13.95 0.00 0.00 2.85
540 569 7.462590 ACAAAAGAAAACTCTTCTAGCCCTAT 58.537 34.615 0.00 0.00 0.00 2.57
545 574 5.622346 AAACTCTTCTAGCCCTATCCTTG 57.378 43.478 0.00 0.00 0.00 3.61
552 581 4.884961 TCTAGCCCTATCCTTGTTCTTCT 58.115 43.478 0.00 0.00 0.00 2.85
553 582 6.027025 TCTAGCCCTATCCTTGTTCTTCTA 57.973 41.667 0.00 0.00 0.00 2.10
554 583 6.071984 TCTAGCCCTATCCTTGTTCTTCTAG 58.928 44.000 0.00 0.00 0.00 2.43
625 678 4.278419 GTGTACCCAAAGCATGAAGAACTT 59.722 41.667 0.00 0.00 0.00 2.66
626 679 4.278170 TGTACCCAAAGCATGAAGAACTTG 59.722 41.667 0.00 0.00 0.00 3.16
627 680 2.036346 ACCCAAAGCATGAAGAACTTGC 59.964 45.455 0.00 0.00 45.88 4.01
631 684 3.984292 GCATGAAGAACTTGCTCGG 57.016 52.632 0.00 0.00 43.40 4.63
632 685 0.179179 GCATGAAGAACTTGCTCGGC 60.179 55.000 0.00 0.00 43.40 5.54
633 686 0.449388 CATGAAGAACTTGCTCGGCC 59.551 55.000 0.00 0.00 0.00 6.13
634 687 0.678048 ATGAAGAACTTGCTCGGCCC 60.678 55.000 0.00 0.00 0.00 5.80
635 688 2.358737 AAGAACTTGCTCGGCCCG 60.359 61.111 0.00 0.00 0.00 6.13
638 691 4.947147 AACTTGCTCGGCCCGCAA 62.947 61.111 21.69 21.69 44.36 4.85
639 692 4.947147 ACTTGCTCGGCCCGCAAA 62.947 61.111 22.79 10.78 45.64 3.68
640 693 3.669344 CTTGCTCGGCCCGCAAAA 61.669 61.111 22.79 7.11 45.64 2.44
641 694 3.206211 CTTGCTCGGCCCGCAAAAA 62.206 57.895 22.79 6.49 45.64 1.94
725 2481 1.411493 GATCTTTCACGGACGGCGTC 61.411 60.000 30.72 30.72 0.00 5.19
785 2541 2.561478 TTTCCAGAAAACCCTCTCGG 57.439 50.000 0.00 0.00 37.81 4.63
813 2569 0.984961 CTCTCCATCCCAAGCCCTCA 60.985 60.000 0.00 0.00 0.00 3.86
833 2589 2.989253 GGCGGGGGTTGTTTCCAG 60.989 66.667 0.00 0.00 0.00 3.86
924 2680 3.944250 ATCCCCAGCGCCACCAAAG 62.944 63.158 2.29 0.00 0.00 2.77
1239 3000 3.488489 CTGTAATTTAGTGTTGTGCGGC 58.512 45.455 0.00 0.00 0.00 6.53
1297 3058 2.192608 GACTCGCGTGTTCCCGTAGT 62.193 60.000 15.72 2.89 0.00 2.73
1308 3069 0.458669 TCCCGTAGTTCTGCGAATCC 59.541 55.000 11.43 0.00 0.00 3.01
1322 3083 2.356818 GAATCCTCCTCCGGTGCTCG 62.357 65.000 0.00 0.00 38.88 5.03
1323 3084 3.663815 ATCCTCCTCCGGTGCTCGT 62.664 63.158 0.00 0.00 37.11 4.18
1387 3148 0.183492 GGTCAGCTGCATTGGGGATA 59.817 55.000 9.47 0.00 0.00 2.59
1426 3187 9.077885 TCTAATTTTACCTCATTTCAAGCAAGT 57.922 29.630 0.00 0.00 0.00 3.16
1446 3207 1.036707 GGAGCTCTAGTCGCCATCTT 58.963 55.000 14.64 0.00 0.00 2.40
1447 3208 2.231529 GGAGCTCTAGTCGCCATCTTA 58.768 52.381 14.64 0.00 0.00 2.10
1448 3209 2.227865 GGAGCTCTAGTCGCCATCTTAG 59.772 54.545 14.64 0.00 0.00 2.18
1449 3210 2.227865 GAGCTCTAGTCGCCATCTTAGG 59.772 54.545 6.43 0.00 0.00 2.69
1450 3211 1.271102 GCTCTAGTCGCCATCTTAGGG 59.729 57.143 0.00 0.00 0.00 3.53
1451 3212 2.588620 CTCTAGTCGCCATCTTAGGGT 58.411 52.381 0.00 0.00 0.00 4.34
1452 3213 2.294791 CTCTAGTCGCCATCTTAGGGTG 59.705 54.545 0.00 0.00 37.26 4.61
1453 3214 0.750850 TAGTCGCCATCTTAGGGTGC 59.249 55.000 0.00 0.00 35.87 5.01
1454 3215 1.220749 GTCGCCATCTTAGGGTGCA 59.779 57.895 0.00 0.00 35.87 4.57
1455 3216 0.179045 GTCGCCATCTTAGGGTGCAT 60.179 55.000 0.00 0.00 35.87 3.96
1456 3217 0.546122 TCGCCATCTTAGGGTGCATT 59.454 50.000 0.00 0.00 35.87 3.56
1457 3218 1.765904 TCGCCATCTTAGGGTGCATTA 59.234 47.619 0.00 0.00 35.87 1.90
1458 3219 2.146342 CGCCATCTTAGGGTGCATTAG 58.854 52.381 0.00 0.00 0.00 1.73
1459 3220 2.224281 CGCCATCTTAGGGTGCATTAGA 60.224 50.000 0.00 0.00 0.00 2.10
1460 3221 3.406764 GCCATCTTAGGGTGCATTAGAG 58.593 50.000 0.00 0.00 0.00 2.43
1461 3222 3.808618 GCCATCTTAGGGTGCATTAGAGG 60.809 52.174 0.00 0.00 0.00 3.69
1462 3223 3.648067 CCATCTTAGGGTGCATTAGAGGA 59.352 47.826 0.00 0.00 0.00 3.71
1463 3224 4.288105 CCATCTTAGGGTGCATTAGAGGAT 59.712 45.833 0.00 0.00 0.00 3.24
1464 3225 5.222007 CCATCTTAGGGTGCATTAGAGGATT 60.222 44.000 0.00 0.00 0.00 3.01
1465 3226 5.296151 TCTTAGGGTGCATTAGAGGATTG 57.704 43.478 0.00 0.00 0.00 2.67
1466 3227 2.355010 AGGGTGCATTAGAGGATTGC 57.645 50.000 0.00 0.00 35.41 3.56
1467 3228 1.849039 AGGGTGCATTAGAGGATTGCT 59.151 47.619 0.00 0.00 35.78 3.91
1468 3229 3.048600 AGGGTGCATTAGAGGATTGCTA 58.951 45.455 0.00 0.00 35.78 3.49
1469 3230 3.654806 AGGGTGCATTAGAGGATTGCTAT 59.345 43.478 0.00 0.00 35.78 2.97
1470 3231 4.006319 GGGTGCATTAGAGGATTGCTATC 58.994 47.826 0.00 0.00 35.78 2.08
1471 3232 4.263243 GGGTGCATTAGAGGATTGCTATCT 60.263 45.833 8.06 0.00 35.78 1.98
1477 3238 3.699411 AGAGGATTGCTATCTGATGCC 57.301 47.619 8.06 0.00 0.00 4.40
1479 3240 3.008157 AGAGGATTGCTATCTGATGCCTG 59.992 47.826 8.06 0.00 0.00 4.85
1494 3255 1.885887 TGCCTGGTGCTGTTATGTTTC 59.114 47.619 0.00 0.00 42.00 2.78
1543 3305 3.844577 ACTGAATTGAGATTGTGCTGC 57.155 42.857 0.00 0.00 0.00 5.25
1573 3335 1.939934 GCGCCTTATTGTGATGTAGCA 59.060 47.619 0.00 0.00 0.00 3.49
1575 3337 3.198068 CGCCTTATTGTGATGTAGCACT 58.802 45.455 1.77 0.00 39.49 4.40
1606 3368 3.455152 GTGGCTTGTTTCCACCCC 58.545 61.111 0.89 0.00 46.26 4.95
1685 3450 0.179045 ACATAATGGACGGCAGGAGC 60.179 55.000 0.00 0.00 41.10 4.70
1697 3462 0.675837 GCAGGAGCTGATGCAGTGAA 60.676 55.000 13.52 0.00 42.11 3.18
1749 3514 9.846248 ATTCTTTGACATTATGCTTTGACTTAC 57.154 29.630 0.00 0.00 0.00 2.34
1790 3555 1.594331 GGTGTCTGTTCCACAAGGTC 58.406 55.000 0.00 0.00 34.46 3.85
1894 3661 7.972832 TTTACCGAACTCTCAATATGTGTTT 57.027 32.000 0.00 0.00 0.00 2.83
1918 3685 3.807071 CCCCAACTTATGTTTTTGTGTGC 59.193 43.478 0.00 0.00 33.52 4.57
1923 3690 0.029433 TATGTTTTTGTGTGCGCGCA 59.971 45.000 33.09 33.09 0.00 6.09
1940 3707 2.158300 CACGTGTGTGTGTGTGTGT 58.842 52.632 7.58 0.00 41.34 3.72
1941 3708 0.179227 CACGTGTGTGTGTGTGTGTG 60.179 55.000 7.58 0.00 41.34 3.82
1942 3709 0.601576 ACGTGTGTGTGTGTGTGTGT 60.602 50.000 0.00 0.00 0.00 3.72
1943 3710 0.179227 CGTGTGTGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
1944 3711 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1945 3712 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1946 3713 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1947 3714 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1948 3715 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1949 3716 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1950 3717 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1951 3718 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1952 3719 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1953 3720 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1954 3721 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1955 3722 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1956 3723 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1957 3724 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1958 3725 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1959 3726 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1960 3727 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1961 3728 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1962 3729 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1963 3730 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1964 3731 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1965 3732 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1966 3733 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
1967 3734 1.225991 GTGTGTGTGTGTGTGTGCG 60.226 57.895 0.00 0.00 0.00 5.34
1968 3735 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
1969 3736 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
1970 3737 3.860125 GTGTGTGTGTGTGCGCGT 61.860 61.111 8.43 0.00 0.00 6.01
1971 3738 3.858989 TGTGTGTGTGTGCGCGTG 61.859 61.111 8.43 0.00 0.00 5.34
1972 3739 3.860125 GTGTGTGTGTGCGCGTGT 61.860 61.111 8.43 0.00 0.00 4.49
1973 3740 3.858989 TGTGTGTGTGCGCGTGTG 61.859 61.111 8.43 0.00 0.00 3.82
1990 3757 0.721718 GTGCGTGCTCTGAACCATAC 59.278 55.000 0.00 0.00 0.00 2.39
2043 3810 5.661458 TGAATTTAGTCTGGCTACTACTGC 58.339 41.667 0.00 0.00 31.73 4.40
2138 3905 4.736126 TGAGATCCGTGCAGAATTAAGA 57.264 40.909 0.00 0.00 0.00 2.10
2212 3979 6.247229 TGCCTCACAGGTACAATATTACAT 57.753 37.500 0.00 0.00 37.80 2.29
2319 4087 0.250038 CCTTGCGGGATGATGTCGAT 60.250 55.000 0.00 0.00 37.23 3.59
2488 4261 8.454106 ACACTGACAAAGATAAATGAAGCATAC 58.546 33.333 0.00 0.00 0.00 2.39
2565 4345 8.491134 TGGTAAATTGCATAGTTAGGACATACT 58.509 33.333 0.00 0.00 0.00 2.12
2566 4346 8.989980 GGTAAATTGCATAGTTAGGACATACTC 58.010 37.037 0.00 0.00 0.00 2.59
2567 4347 8.989980 GTAAATTGCATAGTTAGGACATACTCC 58.010 37.037 0.00 0.00 39.81 3.85
2568 4348 5.546621 TTGCATAGTTAGGACATACTCCC 57.453 43.478 0.00 0.00 40.53 4.30
2569 4349 4.816126 TGCATAGTTAGGACATACTCCCT 58.184 43.478 0.00 0.00 40.53 4.20
2570 4350 4.833380 TGCATAGTTAGGACATACTCCCTC 59.167 45.833 0.00 0.00 40.53 4.30
2571 4351 4.221041 GCATAGTTAGGACATACTCCCTCC 59.779 50.000 0.00 0.00 40.53 4.30
2572 4352 2.946785 AGTTAGGACATACTCCCTCCG 58.053 52.381 0.00 0.00 40.53 4.63
2573 4353 2.244252 AGTTAGGACATACTCCCTCCGT 59.756 50.000 0.00 0.00 40.53 4.69
2574 4354 3.029570 GTTAGGACATACTCCCTCCGTT 58.970 50.000 0.00 0.00 40.53 4.44
2575 4355 1.777941 AGGACATACTCCCTCCGTTC 58.222 55.000 0.00 0.00 40.53 3.95
2576 4356 0.751452 GGACATACTCCCTCCGTTCC 59.249 60.000 0.00 0.00 31.83 3.62
2577 4357 1.481871 GACATACTCCCTCCGTTCCA 58.518 55.000 0.00 0.00 0.00 3.53
2578 4358 1.829222 GACATACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
2579 4359 2.235402 GACATACTCCCTCCGTTCCAAA 59.765 50.000 0.00 0.00 0.00 3.28
2580 4360 2.640826 ACATACTCCCTCCGTTCCAAAA 59.359 45.455 0.00 0.00 0.00 2.44
2581 4361 3.265995 ACATACTCCCTCCGTTCCAAAAT 59.734 43.478 0.00 0.00 0.00 1.82
2582 4362 4.472108 ACATACTCCCTCCGTTCCAAAATA 59.528 41.667 0.00 0.00 0.00 1.40
2583 4363 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2584 4364 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2585 4365 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2586 4366 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2587 4367 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2588 4368 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2589 4369 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2590 4370 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2591 4371 4.430007 TCCGTTCCAAAATAGATGACTCG 58.570 43.478 0.00 0.00 0.00 4.18
2592 4372 4.158949 TCCGTTCCAAAATAGATGACTCGA 59.841 41.667 0.00 0.00 0.00 4.04
2593 4373 4.267928 CCGTTCCAAAATAGATGACTCGAC 59.732 45.833 0.00 0.00 0.00 4.20
2594 4374 5.103000 CGTTCCAAAATAGATGACTCGACT 58.897 41.667 0.00 0.00 0.00 4.18
2595 4375 5.577164 CGTTCCAAAATAGATGACTCGACTT 59.423 40.000 0.00 0.00 0.00 3.01
2596 4376 6.090898 CGTTCCAAAATAGATGACTCGACTTT 59.909 38.462 0.00 0.00 0.00 2.66
2597 4377 7.274904 CGTTCCAAAATAGATGACTCGACTTTA 59.725 37.037 0.00 0.00 0.00 1.85
2598 4378 9.099454 GTTCCAAAATAGATGACTCGACTTTAT 57.901 33.333 0.00 0.00 0.00 1.40
2600 4380 9.745880 TCCAAAATAGATGACTCGACTTTATAC 57.254 33.333 0.00 0.00 0.00 1.47
2601 4381 9.751542 CCAAAATAGATGACTCGACTTTATACT 57.248 33.333 0.00 0.00 0.00 2.12
2634 4414 9.310716 AGTACAAAGTTAGTACAAAGTTGAGTC 57.689 33.333 6.30 0.00 43.24 3.36
2635 4415 9.090692 GTACAAAGTTAGTACAAAGTTGAGTCA 57.909 33.333 0.00 0.00 41.08 3.41
2636 4416 8.732746 ACAAAGTTAGTACAAAGTTGAGTCAT 57.267 30.769 0.00 0.00 0.00 3.06
2637 4417 8.827677 ACAAAGTTAGTACAAAGTTGAGTCATC 58.172 33.333 0.00 0.00 0.00 2.92
2638 4418 9.046296 CAAAGTTAGTACAAAGTTGAGTCATCT 57.954 33.333 0.00 0.00 0.00 2.90
2645 4425 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
2646 4426 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
2647 4427 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
2648 4428 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
2649 4429 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2650 4430 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2651 4431 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2652 4432 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2653 4433 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2654 4434 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2655 4435 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2656 4436 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2657 4437 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2658 4438 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2659 4439 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
2660 4440 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
2661 4441 2.905415 TTGGAACGGAGGGAGTAGTA 57.095 50.000 0.00 0.00 0.00 1.82
2675 4455 4.113354 GGAGTAGTATCTGCCAAAGAACG 58.887 47.826 0.00 0.00 38.79 3.95
2676 4456 4.381718 GGAGTAGTATCTGCCAAAGAACGT 60.382 45.833 0.00 0.00 38.79 3.99
2679 4459 2.301870 AGTATCTGCCAAAGAACGTGGA 59.698 45.455 0.00 0.00 38.79 4.02
2680 4460 2.270352 ATCTGCCAAAGAACGTGGAA 57.730 45.000 0.00 0.00 38.79 3.53
2697 4477 1.001974 GGAAGTTTGATTTGGTGCCCC 59.998 52.381 0.00 0.00 0.00 5.80
2698 4478 0.678950 AAGTTTGATTTGGTGCCCCG 59.321 50.000 0.00 0.00 0.00 5.73
2715 4495 0.039165 CCGGAGAGCCAAAAGTTTGC 60.039 55.000 0.00 0.00 36.86 3.68
2718 4498 1.620323 GGAGAGCCAAAAGTTTGCCAT 59.380 47.619 0.00 0.00 36.86 4.40
2719 4499 2.037641 GGAGAGCCAAAAGTTTGCCATT 59.962 45.455 0.00 0.00 36.86 3.16
2725 4505 3.495753 GCCAAAAGTTTGCCATTCTTCTG 59.504 43.478 0.00 0.00 36.86 3.02
2731 4511 5.444663 AGTTTGCCATTCTTCTGAAACTC 57.555 39.130 0.00 0.00 35.63 3.01
2746 4526 5.877012 TCTGAAACTCTGGCTGCTTAATAAG 59.123 40.000 0.00 0.00 0.00 1.73
2748 4528 6.237901 TGAAACTCTGGCTGCTTAATAAGAA 58.762 36.000 3.88 0.00 0.00 2.52
2751 4531 8.807948 AAACTCTGGCTGCTTAATAAGAATTA 57.192 30.769 3.88 0.00 33.48 1.40
2752 4532 8.986929 AACTCTGGCTGCTTAATAAGAATTAT 57.013 30.769 3.88 0.00 44.67 1.28
2753 4533 8.388484 ACTCTGGCTGCTTAATAAGAATTATG 57.612 34.615 3.88 0.00 41.21 1.90
2760 4541 9.552114 GCTGCTTAATAAGAATTATGTGCTATG 57.448 33.333 3.88 0.00 41.21 2.23
2770 4551 8.297470 AGAATTATGTGCTATGTGGTTTGATT 57.703 30.769 0.00 0.00 0.00 2.57
2807 4588 9.196139 AGGTTATGTTCTATCTATCTATCCTGC 57.804 37.037 0.00 0.00 0.00 4.85
2808 4589 9.196139 GGTTATGTTCTATCTATCTATCCTGCT 57.804 37.037 0.00 0.00 0.00 4.24
2813 4594 9.147732 TGTTCTATCTATCTATCCTGCTTTTCA 57.852 33.333 0.00 0.00 0.00 2.69
2855 4636 0.036732 AACCTGAGCTGCCAATTCGA 59.963 50.000 0.00 0.00 0.00 3.71
2862 4643 0.452987 GCTGCCAATTCGATCTGCAA 59.547 50.000 0.00 0.00 0.00 4.08
2885 4666 0.189574 TTGGCTTGGTTTCCATGGGA 59.810 50.000 13.02 0.00 31.53 4.37
2906 4687 0.463620 ACATTTGGGCACACACCAAC 59.536 50.000 0.00 0.00 46.94 3.77
2907 4688 0.463204 CATTTGGGCACACACCAACA 59.537 50.000 0.00 0.00 46.94 3.33
2908 4689 0.752054 ATTTGGGCACACACCAACAG 59.248 50.000 0.00 0.00 46.94 3.16
2909 4690 0.323816 TTTGGGCACACACCAACAGA 60.324 50.000 0.00 0.00 46.94 3.41
2910 4691 1.034838 TTGGGCACACACCAACAGAC 61.035 55.000 0.00 0.00 42.75 3.51
2912 4693 1.152963 GGCACACACCAACAGACCT 60.153 57.895 0.00 0.00 0.00 3.85
2934 4715 7.966812 ACCTCTTTTTCTTTTCCAGCATTAAT 58.033 30.769 0.00 0.00 0.00 1.40
2961 4742 2.708051 TCATTCTTTCTGCCTGCTGAG 58.292 47.619 0.00 0.00 0.00 3.35
2962 4743 1.132643 CATTCTTTCTGCCTGCTGAGC 59.867 52.381 0.00 0.00 0.00 4.26
2966 4747 0.819259 TTTCTGCCTGCTGAGCGTTT 60.819 50.000 0.00 0.00 0.00 3.60
3068 4849 8.517062 AACTTATTCCTGAGAATTCTCCATTG 57.483 34.615 28.40 16.86 39.83 2.82
3098 4879 3.373130 CACGTGATGAGGTAAGTCGAGTA 59.627 47.826 10.90 0.00 0.00 2.59
3099 4880 3.373439 ACGTGATGAGGTAAGTCGAGTAC 59.627 47.826 0.00 0.00 0.00 2.73
3121 4902 6.160576 ACTTGAGTTATGCCATTTGTGTTT 57.839 33.333 0.00 0.00 0.00 2.83
3135 4916 9.423061 GCCATTTGTGTTTATTTCAGTAAGATT 57.577 29.630 0.00 0.00 0.00 2.40
3161 4943 4.290093 AGTATGAATGCCCTGTCTCAGTA 58.710 43.478 0.00 0.00 0.00 2.74
3175 4957 4.532126 TGTCTCAGTAACATCCTTCACCAT 59.468 41.667 0.00 0.00 0.00 3.55
3176 4958 5.719563 TGTCTCAGTAACATCCTTCACCATA 59.280 40.000 0.00 0.00 0.00 2.74
3177 4959 6.384015 TGTCTCAGTAACATCCTTCACCATAT 59.616 38.462 0.00 0.00 0.00 1.78
3178 4960 6.703607 GTCTCAGTAACATCCTTCACCATATG 59.296 42.308 0.00 0.00 0.00 1.78
3180 4962 7.125659 TCTCAGTAACATCCTTCACCATATGAA 59.874 37.037 3.65 0.00 45.39 2.57
3182 4964 7.770433 TCAGTAACATCCTTCACCATATGAAAG 59.230 37.037 3.65 5.05 46.80 2.62
3183 4965 7.554118 CAGTAACATCCTTCACCATATGAAAGT 59.446 37.037 3.65 0.00 46.80 2.66
3184 4966 8.109634 AGTAACATCCTTCACCATATGAAAGTT 58.890 33.333 3.65 0.14 46.80 2.66
3185 4967 6.764308 ACATCCTTCACCATATGAAAGTTG 57.236 37.500 3.65 7.42 46.80 3.16
3186 4968 5.653769 ACATCCTTCACCATATGAAAGTTGG 59.346 40.000 3.65 0.00 46.80 3.77
3187 4969 5.255397 TCCTTCACCATATGAAAGTTGGT 57.745 39.130 3.65 0.00 46.80 3.67
3190 4979 7.235079 TCCTTCACCATATGAAAGTTGGTTTA 58.765 34.615 3.65 0.00 46.80 2.01
3225 5014 2.591923 TGCCTTCTTGGTGTGCAAATA 58.408 42.857 0.00 0.00 38.35 1.40
3388 5177 6.295067 GCCATATCAAAACCAACACCTTACTT 60.295 38.462 0.00 0.00 0.00 2.24
3492 5281 4.998051 AGGTCAAACCACCAGATAATGTT 58.002 39.130 0.00 0.00 41.95 2.71
3540 5329 7.331193 CCAGTGACACAGGTTAGTATTAGTTTC 59.669 40.741 8.59 0.00 0.00 2.78
3571 5360 5.880054 TGCATAGTTTTCTGCTCCTTTAC 57.120 39.130 0.00 0.00 39.16 2.01
3580 5369 7.174080 AGTTTTCTGCTCCTTTACATCTTTCTC 59.826 37.037 0.00 0.00 0.00 2.87
3581 5370 5.745312 TCTGCTCCTTTACATCTTTCTCA 57.255 39.130 0.00 0.00 0.00 3.27
3607 5396 6.772360 TTTATGTTATCATCCTGCTTTGCA 57.228 33.333 0.00 0.00 35.70 4.08
3610 5399 3.191162 TGTTATCATCCTGCTTTGCACAC 59.809 43.478 0.00 0.00 33.79 3.82
3624 5413 3.902261 TGCACACAGCTTGACATTAAG 57.098 42.857 3.37 0.00 45.94 1.85
3631 5420 7.017645 CACACAGCTTGACATTAAGTACATTC 58.982 38.462 0.00 0.00 0.00 2.67
3633 5422 5.163854 ACAGCTTGACATTAAGTACATTCGC 60.164 40.000 0.00 0.00 0.00 4.70
3643 5432 0.248907 GTACATTCGCGCTGCCTCTA 60.249 55.000 5.56 0.00 0.00 2.43
3644 5433 0.248907 TACATTCGCGCTGCCTCTAC 60.249 55.000 5.56 0.00 0.00 2.59
3645 5434 2.278857 ATTCGCGCTGCCTCTACG 60.279 61.111 5.56 0.00 0.00 3.51
3650 5441 1.153901 GCGCTGCCTCTACGTGTAA 60.154 57.895 0.00 0.00 0.00 2.41
3656 5447 4.327898 CGCTGCCTCTACGTGTAAATTTTA 59.672 41.667 0.00 0.00 0.00 1.52
3663 5454 8.662141 GCCTCTACGTGTAAATTTTATTCTGAA 58.338 33.333 0.00 0.00 0.00 3.02
3669 5460 9.659830 ACGTGTAAATTTTATTCTGAAACTGTC 57.340 29.630 0.00 0.00 0.00 3.51
3670 5461 9.658475 CGTGTAAATTTTATTCTGAAACTGTCA 57.342 29.630 0.00 0.00 34.17 3.58
3678 5474 5.862924 ATTCTGAAACTGTCATGGTTACG 57.137 39.130 0.00 0.00 35.07 3.18
3696 5492 6.430308 TGGTTACGTTGCTAATTATTTGGACA 59.570 34.615 0.00 0.00 0.00 4.02
3727 5525 5.983540 TGAACTTGTTACTTTTTGCCCATT 58.016 33.333 0.00 0.00 0.00 3.16
3768 5566 7.966339 TCTGGATAAGTAAGTTGGCTACTAA 57.034 36.000 1.15 0.00 35.54 2.24
3836 5634 2.545952 GGAAGTGTGACATCGTGAGTGT 60.546 50.000 0.00 0.00 0.00 3.55
3891 5689 6.071221 TCCTCGTTTATGCTGTCCTTAACTTA 60.071 38.462 0.00 0.00 0.00 2.24
3972 5771 4.980434 GCTATGCTTTCATTGGTATGCTTG 59.020 41.667 0.00 0.00 34.22 4.01
3973 5772 3.872511 TGCTTTCATTGGTATGCTTGG 57.127 42.857 0.00 0.00 0.00 3.61
3974 5773 2.094078 TGCTTTCATTGGTATGCTTGGC 60.094 45.455 0.00 0.00 0.00 4.52
3996 5795 6.126681 TGGCCCCTCTAAACTTTTATACTACC 60.127 42.308 0.00 0.00 0.00 3.18
4126 5925 2.615493 GGCCTACAATATGGTCGATGGG 60.615 54.545 0.00 0.00 0.00 4.00
4188 5987 3.181497 ACAATCGCATCATGTAGTTTGCC 60.181 43.478 0.00 0.00 0.00 4.52
4243 6042 0.823356 GCAGCAGGGAGTCCAAACAA 60.823 55.000 12.30 0.00 34.83 2.83
4337 6136 6.520272 TGGTTAATGGACAAAAATGTCTTGG 58.480 36.000 8.68 0.00 38.74 3.61
4347 6146 5.170748 CAAAAATGTCTTGGGGATTAGCAC 58.829 41.667 0.00 0.00 0.00 4.40
4374 6173 1.280421 GGATGCCAACAGAGGAAGACT 59.720 52.381 0.00 0.00 0.00 3.24
4375 6174 2.354259 GATGCCAACAGAGGAAGACTG 58.646 52.381 0.00 0.00 40.68 3.51
4456 6284 4.219070 ACATGTTTGGACTTCACATCATGG 59.781 41.667 0.00 0.00 36.16 3.66
4462 6290 2.565841 GACTTCACATCATGGTAGGGC 58.434 52.381 0.00 0.00 0.00 5.19
4465 6293 1.783071 TCACATCATGGTAGGGCGTA 58.217 50.000 0.00 0.00 0.00 4.42
4519 6348 6.619801 AAGATGCTATTTCGTAATCAACCC 57.380 37.500 0.00 0.00 0.00 4.11
4569 6398 5.785940 ACTCCAACCTTTGTCTACCTATCTT 59.214 40.000 0.00 0.00 0.00 2.40
4658 6487 7.544217 AGAACAAAATTCGTTAACAAGCAACTT 59.456 29.630 6.39 0.00 0.00 2.66
4661 6490 7.117092 ACAAAATTCGTTAACAAGCAACTTTGT 59.883 29.630 6.39 8.01 42.82 2.83
4662 6491 6.567769 AATTCGTTAACAAGCAACTTTGTG 57.432 33.333 6.39 0.00 40.24 3.33
4685 6514 0.037975 GCTTGATGCCCAACAACTGG 60.038 55.000 0.00 0.00 45.97 4.00
4756 6586 3.696051 ACTTGTGCAACTTCAGTGTGATT 59.304 39.130 0.00 0.00 38.04 2.57
4821 6652 7.299307 AGAAGGTTCTAGATGGCACAATTGTC 61.299 42.308 8.48 3.87 37.64 3.18
4822 6653 9.591238 AGAAGGTTCTAGATGGCACAATTGTCA 62.591 40.741 8.48 5.20 37.64 3.58
4830 6661 3.814625 TGGCACAATTGTCAACTACTCA 58.185 40.909 8.48 0.00 33.17 3.41
4831 6662 4.203226 TGGCACAATTGTCAACTACTCAA 58.797 39.130 8.48 0.00 33.17 3.02
4867 6749 6.828785 ACTTGTTCCACCTGTATTAATCATCC 59.171 38.462 0.00 0.00 0.00 3.51
4880 6762 9.440773 TGTATTAATCATCCTAGATGCACATTC 57.559 33.333 0.00 0.00 0.00 2.67
4921 6816 4.393062 TGATCTTTTGTCAGAATTCGAGGC 59.607 41.667 0.00 0.00 0.00 4.70
4962 6857 5.207768 GTGCATATTTCAAGGTTAGCATCG 58.792 41.667 0.00 0.00 32.98 3.84
5063 6960 4.929808 AGTTTGTGCACTAGTGTACTATGC 59.070 41.667 34.28 24.29 44.76 3.14
5107 7004 4.432712 AGTCACAAAATTGTTGGTGCTTC 58.567 39.130 0.00 0.00 38.41 3.86
5138 7035 5.693104 TCAGTGTCGTCTTACAATGTTTACC 59.307 40.000 0.00 0.00 43.86 2.85
5168 7065 8.637986 GCCCTACAATTTCATTGATTATTGGTA 58.362 33.333 18.55 11.43 42.83 3.25
5193 7090 4.283363 TCCTACGGTAGCACTATCTAGG 57.717 50.000 9.70 6.94 0.00 3.02
5194 7091 3.906218 TCCTACGGTAGCACTATCTAGGA 59.094 47.826 9.70 9.98 30.62 2.94
5206 7103 8.770010 AGCACTATCTAGGAAACACTACTTAT 57.230 34.615 0.00 0.00 0.00 1.73
5345 7242 6.615726 TGGAAATAAAGGTATAGCTCCTGACT 59.384 38.462 4.63 0.00 35.27 3.41
5351 7248 1.681793 GTATAGCTCCTGACTGCGGAA 59.318 52.381 0.00 0.00 0.00 4.30
5369 7269 8.902806 ACTGCGGAATTTTTCTTCATGATATTA 58.097 29.630 0.00 0.00 0.00 0.98
5400 7300 6.227522 TGTCGTGAAATGTGGATTCTCTTTA 58.772 36.000 0.00 0.00 0.00 1.85
5401 7301 6.878923 TGTCGTGAAATGTGGATTCTCTTTAT 59.121 34.615 0.00 0.00 0.00 1.40
5402 7302 7.148423 TGTCGTGAAATGTGGATTCTCTTTATG 60.148 37.037 0.00 0.00 0.00 1.90
5403 7303 7.064609 GTCGTGAAATGTGGATTCTCTTTATGA 59.935 37.037 0.00 0.00 0.00 2.15
5404 7304 7.278646 TCGTGAAATGTGGATTCTCTTTATGAG 59.721 37.037 0.00 0.00 43.96 2.90
5405 7305 7.065085 CGTGAAATGTGGATTCTCTTTATGAGT 59.935 37.037 0.00 0.00 43.13 3.41
5406 7306 9.383519 GTGAAATGTGGATTCTCTTTATGAGTA 57.616 33.333 0.00 0.00 43.13 2.59
5411 7311 8.251750 TGTGGATTCTCTTTATGAGTAAAACG 57.748 34.615 0.00 0.00 43.13 3.60
5419 7319 7.542477 TCTCTTTATGAGTAAAACGAAGCTCTG 59.458 37.037 0.00 0.00 43.13 3.35
5423 7323 5.134202 TGAGTAAAACGAAGCTCTGATGA 57.866 39.130 0.00 0.00 0.00 2.92
5428 7328 7.324178 AGTAAAACGAAGCTCTGATGATTAGT 58.676 34.615 0.00 0.00 0.00 2.24
5445 7345 7.549147 TGATTAGTTGGGTATGGGTACTATC 57.451 40.000 0.00 0.00 0.00 2.08
5448 7348 4.627015 AGTTGGGTATGGGTACTATCACA 58.373 43.478 0.00 0.00 0.00 3.58
5451 7351 4.363573 TGGGTATGGGTACTATCACACAA 58.636 43.478 0.00 0.00 34.95 3.33
5469 7369 4.697352 ACACAACAGCATTAGATGAGAACC 59.303 41.667 0.00 0.00 34.60 3.62
5544 7444 5.822519 ACTTGTGAAATTGAACTCTACTGCA 59.177 36.000 0.00 0.00 0.00 4.41
5563 7471 9.178758 CTACTGCAAACCTAATTCTTATTCCTT 57.821 33.333 0.00 0.00 0.00 3.36
5567 7475 8.087750 TGCAAACCTAATTCTTATTCCTTTGTG 58.912 33.333 0.00 0.00 0.00 3.33
5598 7509 6.844388 ACATAGGTGGAACATAGTCAAGGATA 59.156 38.462 0.00 0.00 44.52 2.59
5601 7512 7.546250 AGGTGGAACATAGTCAAGGATATAG 57.454 40.000 0.00 0.00 44.52 1.31
5602 7513 6.498651 AGGTGGAACATAGTCAAGGATATAGG 59.501 42.308 0.00 0.00 44.52 2.57
5692 7604 3.655276 AAACTTTTGGAGCATGCTGAG 57.345 42.857 28.27 16.09 0.00 3.35
5694 7606 1.074405 ACTTTTGGAGCATGCTGAGGA 59.926 47.619 28.27 5.58 0.00 3.71
5710 7622 1.414550 GAGGATACCCAGAGAAGTGCC 59.585 57.143 0.00 0.00 33.88 5.01
5760 7672 8.814038 AATATCTATTGGATTGGCAAGTATCC 57.186 34.615 10.73 10.73 40.62 2.59
5761 7673 5.912149 TCTATTGGATTGGCAAGTATCCT 57.088 39.130 16.91 3.39 40.80 3.24
5766 7678 7.919385 ATTGGATTGGCAAGTATCCTAAAAT 57.081 32.000 16.91 7.83 40.80 1.82
5777 7689 9.274065 GCAAGTATCCTAAAATTTTGTTAGACG 57.726 33.333 13.76 0.00 31.37 4.18
5800 7712 5.406780 CGATTGGAGATATGAACAAGTAGCC 59.593 44.000 0.00 0.00 0.00 3.93
5818 7825 1.355210 CGCACGTTTTTCTGCCACT 59.645 52.632 0.00 0.00 0.00 4.00
5821 7828 1.469079 GCACGTTTTTCTGCCACTTGT 60.469 47.619 0.00 0.00 0.00 3.16
5822 7829 2.874849 CACGTTTTTCTGCCACTTGTT 58.125 42.857 0.00 0.00 0.00 2.83
5823 7830 2.851824 CACGTTTTTCTGCCACTTGTTC 59.148 45.455 0.00 0.00 0.00 3.18
5824 7831 2.490115 ACGTTTTTCTGCCACTTGTTCA 59.510 40.909 0.00 0.00 0.00 3.18
5825 7832 3.130340 ACGTTTTTCTGCCACTTGTTCAT 59.870 39.130 0.00 0.00 0.00 2.57
5869 7887 2.104451 TCCTTGGGCTTTACAACGTGTA 59.896 45.455 0.00 0.00 0.00 2.90
5893 7911 9.035607 GTATCTACAATTCTGATATTATGCCCG 57.964 37.037 0.00 0.00 0.00 6.13
6112 8138 1.038280 AACCGTCGAAGGTCACTCTT 58.962 50.000 23.55 3.80 45.21 2.85
6121 8147 4.524714 TCGAAGGTCACTCTTCATCTCTTT 59.475 41.667 6.78 0.00 42.27 2.52
6135 8161 8.725148 TCTTCATCTCTTTTCTTAGACAATTGC 58.275 33.333 5.05 0.00 0.00 3.56
6136 8162 8.627208 TTCATCTCTTTTCTTAGACAATTGCT 57.373 30.769 5.05 6.49 0.00 3.91
6137 8163 8.627208 TCATCTCTTTTCTTAGACAATTGCTT 57.373 30.769 5.05 0.00 0.00 3.91
6138 8164 9.071276 TCATCTCTTTTCTTAGACAATTGCTTT 57.929 29.630 5.05 0.00 0.00 3.51
6139 8165 9.688592 CATCTCTTTTCTTAGACAATTGCTTTT 57.311 29.630 5.05 0.00 0.00 2.27
6142 8168 9.122613 CTCTTTTCTTAGACAATTGCTTTTAGC 57.877 33.333 5.05 0.00 42.82 3.09
6205 8231 6.312399 TGTTGCAGTTATGATTTCGTCTTT 57.688 33.333 0.00 0.00 0.00 2.52
6222 8248 4.440663 CGTCTTTGAGGATGATACTGCTCA 60.441 45.833 0.00 0.00 41.21 4.26
6327 8353 1.204467 CAGCAGGGAGAGAAGTCAGAC 59.796 57.143 0.00 0.00 0.00 3.51
6342 8368 0.171455 CAGACCGACGAGAAAGGAGG 59.829 60.000 0.00 0.00 0.00 4.30
6358 8384 2.205243 GAGGCCGGCAAAGCAAAGAG 62.205 60.000 30.85 0.00 0.00 2.85
6359 8385 2.259511 GCCGGCAAAGCAAAGAGG 59.740 61.111 24.80 0.00 0.00 3.69
6363 8389 1.455383 CGGCAAAGCAAAGAGGGTGT 61.455 55.000 0.00 0.00 0.00 4.16
6487 8513 1.284198 AGCAGGAGCAGAAACATGGAT 59.716 47.619 0.00 0.00 45.49 3.41
6489 8515 2.022195 CAGGAGCAGAAACATGGATGG 58.978 52.381 0.00 0.00 0.00 3.51
6780 8806 1.400888 CGCCAATTTTCTGCTTACGCA 60.401 47.619 0.00 0.00 45.60 5.24
6917 8957 2.822701 GGAATCGAACCGGTGGGC 60.823 66.667 8.52 0.00 36.48 5.36
6965 9005 1.897133 TCCCGTGTGCTGTACTAATGT 59.103 47.619 0.00 0.00 0.00 2.71
6968 9008 3.585862 CCGTGTGCTGTACTAATGTTCT 58.414 45.455 0.00 0.00 0.00 3.01
6970 9010 4.234574 CGTGTGCTGTACTAATGTTCTCA 58.765 43.478 0.00 0.00 0.00 3.27
6999 9039 3.473367 CGAACATTTCTGCTCGTTTCTG 58.527 45.455 0.00 0.00 36.48 3.02
7005 9045 3.542712 TTCTGCTCGTTTCTGCAATTC 57.457 42.857 0.00 0.00 38.81 2.17
7030 9070 6.707440 TTGCAAGTGAAATGAGAACCTTAA 57.293 33.333 0.00 0.00 0.00 1.85
7129 9170 2.823154 GGCATTGTTTGGTTAGTAGGCA 59.177 45.455 0.00 0.00 0.00 4.75
7185 9228 3.181466 GGTCTGGCAAATGTGGTTTCTTT 60.181 43.478 0.00 0.00 0.00 2.52
7201 9244 6.084277 GGTTTCTTTGTCAAATAGCCTAACG 58.916 40.000 0.00 0.00 0.00 3.18
7209 9252 4.271776 GTCAAATAGCCTAACGCCGTTATT 59.728 41.667 10.50 0.00 38.78 1.40
7282 9325 9.515020 TGTTCACAAAATTTCTCAAGTATGTTC 57.485 29.630 0.00 0.00 0.00 3.18
7329 9372 3.485947 TGTTAGATCATTTTGCGTGGC 57.514 42.857 0.00 0.00 0.00 5.01
7374 9417 4.811557 GCAAGATCGCTTTACTAATCCAGT 59.188 41.667 0.00 0.00 35.05 4.00
7394 9445 9.920946 ATCCAGTATTTTGTGTATGGTAGATTT 57.079 29.630 0.00 0.00 0.00 2.17
7505 9558 2.094390 CCATGTGAGAAAACCTGGCATG 60.094 50.000 0.00 0.00 35.32 4.06
7525 9611 4.316823 AGCACTCCCCGGGTCTGA 62.317 66.667 21.85 8.93 0.00 3.27
7568 9654 2.411290 CTCGCGAAGGAGGAGCTC 59.589 66.667 11.33 4.71 0.00 4.09
7601 9687 0.108804 CTACATATAGGCCGGCACCG 60.109 60.000 30.85 12.27 39.44 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 6.069673 TCCCTCAATAGCCAACTTATTCTGAA 60.070 38.462 0.00 0.00 0.00 3.02
57 58 8.628882 AAACCATTTGAAAATATAGTTAGCGC 57.371 30.769 0.00 0.00 0.00 5.92
95 96 4.191544 TCTCTTCCCTACAAATCGCAATG 58.808 43.478 0.00 0.00 0.00 2.82
96 97 4.487714 TCTCTTCCCTACAAATCGCAAT 57.512 40.909 0.00 0.00 0.00 3.56
102 103 3.333680 TGCCCTTTCTCTTCCCTACAAAT 59.666 43.478 0.00 0.00 0.00 2.32
106 107 1.909986 ACTGCCCTTTCTCTTCCCTAC 59.090 52.381 0.00 0.00 0.00 3.18
132 133 2.542020 TGAGAAGAATGTTCGCCACA 57.458 45.000 0.00 0.00 40.71 4.17
244 245 7.472334 AGCAAAGATAAAAACTCATGGACAT 57.528 32.000 0.00 0.00 0.00 3.06
253 254 8.245195 TGGGAAGTAAAGCAAAGATAAAAACT 57.755 30.769 0.00 0.00 0.00 2.66
275 278 2.880890 GACCATGAATCGAAAGGATGGG 59.119 50.000 16.19 4.78 38.33 4.00
305 328 8.133024 ACAAATAAAGCCAATAATGACCAGAA 57.867 30.769 0.00 0.00 0.00 3.02
307 330 8.776376 AAACAAATAAAGCCAATAATGACCAG 57.224 30.769 0.00 0.00 0.00 4.00
443 468 9.236691 CCATGTTCGATTCAAATTATTTGGTAG 57.763 33.333 16.42 7.52 40.98 3.18
445 470 7.759433 GTCCATGTTCGATTCAAATTATTTGGT 59.241 33.333 16.42 6.95 40.98 3.67
446 471 7.044117 CGTCCATGTTCGATTCAAATTATTTGG 60.044 37.037 16.42 2.21 40.98 3.28
447 472 7.513505 GCGTCCATGTTCGATTCAAATTATTTG 60.514 37.037 11.12 11.12 41.96 2.32
465 490 0.798776 GGTTGTTGAGAGCGTCCATG 59.201 55.000 0.00 0.00 0.00 3.66
502 527 7.912383 AGTTTTCTTTTGTCTCGAATCGTAAA 58.088 30.769 1.52 0.00 0.00 2.01
512 537 6.072948 GGGCTAGAAGAGTTTTCTTTTGTCTC 60.073 42.308 0.62 0.00 43.63 3.36
513 538 5.765677 GGGCTAGAAGAGTTTTCTTTTGTCT 59.234 40.000 0.62 0.00 43.63 3.41
514 539 5.765677 AGGGCTAGAAGAGTTTTCTTTTGTC 59.234 40.000 0.62 0.00 43.63 3.18
515 540 5.696030 AGGGCTAGAAGAGTTTTCTTTTGT 58.304 37.500 0.62 0.00 43.63 2.83
516 541 7.066404 GGATAGGGCTAGAAGAGTTTTCTTTTG 59.934 40.741 0.62 0.00 43.63 2.44
521 550 5.880164 AGGATAGGGCTAGAAGAGTTTTC 57.120 43.478 0.00 0.00 0.00 2.29
530 559 4.884961 AGAAGAACAAGGATAGGGCTAGA 58.115 43.478 0.00 0.00 0.00 2.43
540 569 6.307776 TCAGAGAGAACTAGAAGAACAAGGA 58.692 40.000 0.00 0.00 0.00 3.36
545 574 8.832521 TCGATATTCAGAGAGAACTAGAAGAAC 58.167 37.037 0.00 0.00 39.49 3.01
553 582 9.829507 AAATTTCATCGATATTCAGAGAGAACT 57.170 29.630 0.00 0.00 39.49 3.01
641 694 6.239148 GGGAATTCAGAGAGCAAGTTCTTTTT 60.239 38.462 7.93 0.00 0.00 1.94
642 695 5.242615 GGGAATTCAGAGAGCAAGTTCTTTT 59.757 40.000 7.93 0.00 0.00 2.27
643 696 4.764308 GGGAATTCAGAGAGCAAGTTCTTT 59.236 41.667 7.93 0.00 0.00 2.52
644 697 4.202503 TGGGAATTCAGAGAGCAAGTTCTT 60.203 41.667 7.93 0.00 0.00 2.52
645 698 3.328931 TGGGAATTCAGAGAGCAAGTTCT 59.671 43.478 7.93 0.00 0.00 3.01
646 699 3.679389 TGGGAATTCAGAGAGCAAGTTC 58.321 45.455 7.93 0.00 0.00 3.01
647 700 3.795688 TGGGAATTCAGAGAGCAAGTT 57.204 42.857 7.93 0.00 0.00 2.66
648 701 3.416156 GTTGGGAATTCAGAGAGCAAGT 58.584 45.455 7.93 0.00 0.00 3.16
649 702 2.751806 GGTTGGGAATTCAGAGAGCAAG 59.248 50.000 7.93 0.00 0.00 4.01
650 703 2.795329 GGTTGGGAATTCAGAGAGCAA 58.205 47.619 7.93 0.00 0.00 3.91
725 2481 4.607293 TGGAATGGAATCCAGTAGATCG 57.393 45.455 8.40 0.00 44.52 3.69
785 2541 0.106967 GGGATGGAGAGGCAGAAACC 60.107 60.000 0.00 0.00 0.00 3.27
786 2542 0.620556 TGGGATGGAGAGGCAGAAAC 59.379 55.000 0.00 0.00 0.00 2.78
790 2546 1.153005 GCTTGGGATGGAGAGGCAG 60.153 63.158 0.00 0.00 0.00 4.85
813 2569 2.360726 GAAACAACCCCCGCCGAT 60.361 61.111 0.00 0.00 0.00 4.18
823 2579 5.451381 CCAACCCTAACTTTCTGGAAACAAC 60.451 44.000 0.00 0.00 42.06 3.32
833 2589 4.217767 GTGACAATCCCAACCCTAACTTTC 59.782 45.833 0.00 0.00 0.00 2.62
1239 3000 2.160822 ATCTCGAATCAATCCAGGCG 57.839 50.000 0.00 0.00 0.00 5.52
1284 3045 1.342082 CGCAGAACTACGGGAACACG 61.342 60.000 0.00 0.00 40.31 4.49
1289 3050 0.458669 GGATTCGCAGAACTACGGGA 59.541 55.000 0.00 0.00 45.90 5.14
1297 3058 1.816537 CGGAGGAGGATTCGCAGAA 59.183 57.895 0.00 0.00 45.90 3.02
1322 3083 2.618709 ACTAAGCAACCAGAAACAGCAC 59.381 45.455 0.00 0.00 0.00 4.40
1323 3084 2.618241 CACTAAGCAACCAGAAACAGCA 59.382 45.455 0.00 0.00 0.00 4.41
1365 3126 1.318158 CCCCAATGCAGCTGACCTTC 61.318 60.000 20.43 0.00 0.00 3.46
1387 3148 2.038387 AATTAGACGCCAATCCGCTT 57.962 45.000 0.00 0.00 0.00 4.68
1426 3187 0.106469 AGATGGCGACTAGAGCTCCA 60.106 55.000 10.93 0.00 34.52 3.86
1446 3207 3.048600 AGCAATCCTCTAATGCACCCTA 58.951 45.455 0.00 0.00 42.45 3.53
1447 3208 1.849039 AGCAATCCTCTAATGCACCCT 59.151 47.619 0.00 0.00 42.45 4.34
1448 3209 2.355010 AGCAATCCTCTAATGCACCC 57.645 50.000 0.00 0.00 42.45 4.61
1449 3210 4.694509 CAGATAGCAATCCTCTAATGCACC 59.305 45.833 0.00 0.00 42.45 5.01
1450 3211 5.545588 TCAGATAGCAATCCTCTAATGCAC 58.454 41.667 0.00 0.00 42.45 4.57
1451 3212 5.813513 TCAGATAGCAATCCTCTAATGCA 57.186 39.130 0.00 0.00 42.45 3.96
1452 3213 5.064962 GCATCAGATAGCAATCCTCTAATGC 59.935 44.000 0.00 0.00 40.34 3.56
1453 3214 5.585445 GGCATCAGATAGCAATCCTCTAATG 59.415 44.000 7.02 0.00 31.98 1.90
1454 3215 5.488203 AGGCATCAGATAGCAATCCTCTAAT 59.512 40.000 7.02 0.00 31.98 1.73
1455 3216 4.842948 AGGCATCAGATAGCAATCCTCTAA 59.157 41.667 7.02 0.00 31.98 2.10
1456 3217 4.222366 CAGGCATCAGATAGCAATCCTCTA 59.778 45.833 7.02 0.00 31.98 2.43
1457 3218 3.008157 CAGGCATCAGATAGCAATCCTCT 59.992 47.826 7.02 0.00 31.98 3.69
1458 3219 3.336468 CAGGCATCAGATAGCAATCCTC 58.664 50.000 7.02 0.00 31.98 3.71
1459 3220 2.040012 CCAGGCATCAGATAGCAATCCT 59.960 50.000 7.02 0.00 31.98 3.24
1460 3221 2.224719 ACCAGGCATCAGATAGCAATCC 60.225 50.000 7.02 0.00 31.98 3.01
1461 3222 2.812591 CACCAGGCATCAGATAGCAATC 59.187 50.000 7.02 0.00 0.00 2.67
1462 3223 2.860009 CACCAGGCATCAGATAGCAAT 58.140 47.619 7.02 0.00 0.00 3.56
1463 3224 1.748244 GCACCAGGCATCAGATAGCAA 60.748 52.381 7.02 0.00 43.97 3.91
1464 3225 0.179037 GCACCAGGCATCAGATAGCA 60.179 55.000 7.02 0.00 43.97 3.49
1465 3226 2.626582 GCACCAGGCATCAGATAGC 58.373 57.895 0.00 0.00 43.97 2.97
1477 3238 5.375417 TGAATGAAACATAACAGCACCAG 57.625 39.130 0.00 0.00 0.00 4.00
1479 3240 8.931385 AATTATGAATGAAACATAACAGCACC 57.069 30.769 0.00 0.00 41.08 5.01
1516 3278 6.072618 AGCACAATCTCAATTCAGTTCTGAAG 60.073 38.462 18.03 8.02 0.00 3.02
1517 3279 5.766670 AGCACAATCTCAATTCAGTTCTGAA 59.233 36.000 15.99 15.99 0.00 3.02
1530 3292 2.747460 GCCCGCAGCACAATCTCA 60.747 61.111 0.00 0.00 42.97 3.27
1554 3316 3.198068 AGTGCTACATCACAATAAGGCG 58.802 45.455 0.00 0.00 39.35 5.52
1573 3335 5.185056 ACAAGCCACTAGAAACAAACAAAGT 59.815 36.000 0.00 0.00 0.00 2.66
1575 3337 5.652994 ACAAGCCACTAGAAACAAACAAA 57.347 34.783 0.00 0.00 0.00 2.83
1603 3365 3.557264 GGAATCCTAAATCTACAGCGGGG 60.557 52.174 0.00 0.00 0.00 5.73
1606 3368 6.867662 ATTTGGAATCCTAAATCTACAGCG 57.132 37.500 0.00 0.00 0.00 5.18
1685 3450 7.649370 ACTAATAATCGATTCACTGCATCAG 57.351 36.000 15.25 0.00 37.52 2.90
1691 3456 9.144747 CCCTGATTACTAATAATCGATTCACTG 57.855 37.037 15.25 6.74 46.76 3.66
1697 3462 9.529823 TGAGTACCCTGATTACTAATAATCGAT 57.470 33.333 0.00 0.00 46.76 3.59
1749 3514 9.342308 ACACCCATTATAATACTTCATTCTGTG 57.658 33.333 0.00 0.00 0.00 3.66
1790 3555 2.426522 TGTGCCAAGAAATCCTTCTCG 58.573 47.619 0.00 0.00 41.23 4.04
1894 3661 4.100189 CACACAAAAACATAAGTTGGGGGA 59.900 41.667 0.00 0.00 38.17 4.81
1923 3690 0.601576 ACACACACACACACACACGT 60.602 50.000 0.00 0.00 0.00 4.49
1926 3693 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1935 3702 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1936 3703 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1937 3704 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1939 3706 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1940 3707 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1941 3708 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1942 3709 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1943 3710 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1944 3711 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1945 3712 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1946 3713 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1947 3714 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
1948 3715 1.872468 GCACACACACACACACACA 59.128 52.632 0.00 0.00 0.00 3.72
1949 3716 1.225991 CGCACACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
1950 3717 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
1951 3718 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
1952 3719 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
1953 3720 3.860125 ACGCGCACACACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
1954 3721 3.858989 CACGCGCACACACACACA 61.859 61.111 5.73 0.00 0.00 3.72
1955 3722 3.860125 ACACGCGCACACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
1956 3723 3.858989 CACACGCGCACACACACA 61.859 61.111 5.73 0.00 0.00 3.72
1967 3734 3.337889 TTCAGAGCACGCACACGC 61.338 61.111 0.00 0.00 45.53 5.34
1969 3736 1.230635 ATGGTTCAGAGCACGCACAC 61.231 55.000 0.00 0.00 35.86 3.82
1970 3737 0.320050 TATGGTTCAGAGCACGCACA 59.680 50.000 0.00 0.00 35.86 4.57
1971 3738 0.721718 GTATGGTTCAGAGCACGCAC 59.278 55.000 0.00 0.00 35.86 5.34
1972 3739 0.320050 TGTATGGTTCAGAGCACGCA 59.680 50.000 0.00 0.00 35.86 5.24
1973 3740 1.438651 TTGTATGGTTCAGAGCACGC 58.561 50.000 0.00 0.00 35.86 5.34
1974 3741 4.406069 CAAATTGTATGGTTCAGAGCACG 58.594 43.478 0.00 0.00 35.86 5.34
1975 3742 4.737054 CCAAATTGTATGGTTCAGAGCAC 58.263 43.478 0.00 0.00 35.86 4.40
1990 3757 8.519492 AATATCGAACACAAAAGACCAAATTG 57.481 30.769 0.00 0.00 0.00 2.32
2043 3810 6.748333 TTCAGCTTTCAGACATATCTTTGG 57.252 37.500 0.00 0.00 30.42 3.28
2111 3878 4.670896 TTCTGCACGGATCTCATCATTA 57.329 40.909 0.00 0.00 0.00 1.90
2127 3894 6.638468 CCAGTTTTTGAGTGTCTTAATTCTGC 59.362 38.462 0.00 0.00 0.00 4.26
2138 3905 4.499696 GCAATAGTGCCAGTTTTTGAGTGT 60.500 41.667 3.16 0.00 45.68 3.55
2162 3929 0.607217 TCTCACCAGCACTTGCCATG 60.607 55.000 0.00 0.00 43.38 3.66
2212 3979 7.822334 TCCTCAAAAATTAAAGATCAGTAGCGA 59.178 33.333 0.00 0.00 0.00 4.93
2370 4139 0.617413 ATCAACCTCTCACCAGCCAG 59.383 55.000 0.00 0.00 0.00 4.85
2488 4261 4.181578 ACGGTCTTCCTTTATCATCAACG 58.818 43.478 0.00 0.00 0.00 4.10
2538 4318 9.116067 GTATGTCCTAACTATGCAATTTACCAA 57.884 33.333 0.00 0.00 0.00 3.67
2565 4345 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2566 4346 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2567 4347 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2568 4348 4.504461 CGAGTCATCTATTTTGGAACGGAG 59.496 45.833 0.00 0.00 0.00 4.63
2569 4349 4.158949 TCGAGTCATCTATTTTGGAACGGA 59.841 41.667 0.00 0.00 0.00 4.69
2570 4350 4.267928 GTCGAGTCATCTATTTTGGAACGG 59.732 45.833 0.00 0.00 0.00 4.44
2571 4351 5.103000 AGTCGAGTCATCTATTTTGGAACG 58.897 41.667 0.00 0.00 0.00 3.95
2572 4352 6.969828 AAGTCGAGTCATCTATTTTGGAAC 57.030 37.500 0.00 0.00 0.00 3.62
2574 4354 9.745880 GTATAAAGTCGAGTCATCTATTTTGGA 57.254 33.333 0.00 0.00 0.00 3.53
2575 4355 9.751542 AGTATAAAGTCGAGTCATCTATTTTGG 57.248 33.333 0.00 0.00 0.00 3.28
2608 4388 9.310716 GACTCAACTTTGTACTAACTTTGTACT 57.689 33.333 12.73 0.00 40.44 2.73
2609 4389 9.090692 TGACTCAACTTTGTACTAACTTTGTAC 57.909 33.333 6.58 6.58 40.27 2.90
2610 4390 9.826574 ATGACTCAACTTTGTACTAACTTTGTA 57.173 29.630 0.00 0.00 0.00 2.41
2611 4391 8.732746 ATGACTCAACTTTGTACTAACTTTGT 57.267 30.769 0.00 0.00 0.00 2.83
2612 4392 9.046296 AGATGACTCAACTTTGTACTAACTTTG 57.954 33.333 0.00 0.00 0.00 2.77
2619 4399 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
2620 4400 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
2621 4401 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2622 4402 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2623 4403 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
2624 4404 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2625 4405 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2626 4406 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2627 4407 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2628 4408 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2629 4409 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2630 4410 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2631 4411 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2632 4412 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2633 4413 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2634 4414 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2635 4415 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2636 4416 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2637 4417 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2638 4418 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
2639 4419 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
2640 4420 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
2641 4421 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2642 4422 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
2643 4423 2.512896 AGATACTACTCCCTCCGTTCCA 59.487 50.000 0.00 0.00 0.00 3.53
2644 4424 2.885894 CAGATACTACTCCCTCCGTTCC 59.114 54.545 0.00 0.00 0.00 3.62
2645 4425 2.293955 GCAGATACTACTCCCTCCGTTC 59.706 54.545 0.00 0.00 0.00 3.95
2646 4426 2.308690 GCAGATACTACTCCCTCCGTT 58.691 52.381 0.00 0.00 0.00 4.44
2647 4427 1.479021 GGCAGATACTACTCCCTCCGT 60.479 57.143 0.00 0.00 0.00 4.69
2648 4428 1.249407 GGCAGATACTACTCCCTCCG 58.751 60.000 0.00 0.00 0.00 4.63
2649 4429 2.383442 TGGCAGATACTACTCCCTCC 57.617 55.000 0.00 0.00 0.00 4.30
2650 4430 3.961408 TCTTTGGCAGATACTACTCCCTC 59.039 47.826 0.00 0.00 0.00 4.30
2651 4431 3.995636 TCTTTGGCAGATACTACTCCCT 58.004 45.455 0.00 0.00 0.00 4.20
2652 4432 4.443621 GTTCTTTGGCAGATACTACTCCC 58.556 47.826 0.00 0.00 0.00 4.30
2653 4433 4.113354 CGTTCTTTGGCAGATACTACTCC 58.887 47.826 0.00 0.00 0.00 3.85
2654 4434 4.563184 CACGTTCTTTGGCAGATACTACTC 59.437 45.833 0.00 0.00 0.00 2.59
2655 4435 4.495422 CACGTTCTTTGGCAGATACTACT 58.505 43.478 0.00 0.00 0.00 2.57
2656 4436 3.617263 CCACGTTCTTTGGCAGATACTAC 59.383 47.826 0.00 0.00 0.00 2.73
2657 4437 3.512329 TCCACGTTCTTTGGCAGATACTA 59.488 43.478 0.00 0.00 33.71 1.82
2658 4438 2.301870 TCCACGTTCTTTGGCAGATACT 59.698 45.455 0.00 0.00 33.71 2.12
2659 4439 2.695359 TCCACGTTCTTTGGCAGATAC 58.305 47.619 0.00 0.00 33.71 2.24
2660 4440 3.244422 ACTTCCACGTTCTTTGGCAGATA 60.244 43.478 0.00 0.00 32.26 1.98
2661 4441 2.154462 CTTCCACGTTCTTTGGCAGAT 58.846 47.619 0.00 0.00 29.49 2.90
2675 4455 2.754472 GGCACCAAATCAAACTTCCAC 58.246 47.619 0.00 0.00 0.00 4.02
2697 4477 3.479255 GCAAACTTTTGGCTCTCCG 57.521 52.632 3.95 0.00 38.57 4.63
2715 4495 3.439476 CAGCCAGAGTTTCAGAAGAATGG 59.561 47.826 0.00 0.00 34.66 3.16
2718 4498 2.105477 AGCAGCCAGAGTTTCAGAAGAA 59.895 45.455 0.00 0.00 0.00 2.52
2719 4499 1.696336 AGCAGCCAGAGTTTCAGAAGA 59.304 47.619 0.00 0.00 0.00 2.87
2725 4505 6.743575 TTCTTATTAAGCAGCCAGAGTTTC 57.256 37.500 0.00 0.00 0.00 2.78
2731 4511 6.860023 GCACATAATTCTTATTAAGCAGCCAG 59.140 38.462 0.00 0.00 30.38 4.85
2746 4526 8.408601 AGAATCAAACCACATAGCACATAATTC 58.591 33.333 0.00 0.00 0.00 2.17
2748 4528 7.886629 AGAATCAAACCACATAGCACATAAT 57.113 32.000 0.00 0.00 0.00 1.28
2751 4531 7.701539 TTTAGAATCAAACCACATAGCACAT 57.298 32.000 0.00 0.00 0.00 3.21
2752 4532 7.517614 TTTTAGAATCAAACCACATAGCACA 57.482 32.000 0.00 0.00 0.00 4.57
2753 4533 8.986477 AATTTTAGAATCAAACCACATAGCAC 57.014 30.769 0.00 0.00 0.00 4.40
2800 4581 4.160252 GGCTCCAAAATGAAAAGCAGGATA 59.840 41.667 0.00 0.00 34.65 2.59
2801 4582 3.055602 GGCTCCAAAATGAAAAGCAGGAT 60.056 43.478 0.00 0.00 34.65 3.24
2802 4583 2.299867 GGCTCCAAAATGAAAAGCAGGA 59.700 45.455 0.00 0.00 34.65 3.86
2804 4585 3.389925 TGGCTCCAAAATGAAAAGCAG 57.610 42.857 0.00 0.00 34.65 4.24
2805 4586 3.134442 ACTTGGCTCCAAAATGAAAAGCA 59.866 39.130 2.69 0.00 35.33 3.91
2806 4587 3.495753 CACTTGGCTCCAAAATGAAAAGC 59.504 43.478 2.69 0.00 35.33 3.51
2807 4588 4.508861 CACACTTGGCTCCAAAATGAAAAG 59.491 41.667 15.53 0.51 35.33 2.27
2808 4589 4.440880 CACACTTGGCTCCAAAATGAAAA 58.559 39.130 15.53 0.00 35.33 2.29
2809 4590 3.181467 CCACACTTGGCTCCAAAATGAAA 60.181 43.478 15.53 0.00 35.56 2.69
2811 4592 1.962807 CCACACTTGGCTCCAAAATGA 59.037 47.619 15.53 0.00 35.56 2.57
2812 4593 2.443887 CCACACTTGGCTCCAAAATG 57.556 50.000 2.69 6.86 35.56 2.32
2855 4636 3.775261 ACCAAGCCAAATTTTGCAGAT 57.225 38.095 15.83 0.04 0.00 2.90
2862 4643 3.498301 CCCATGGAAACCAAGCCAAATTT 60.498 43.478 15.22 0.00 36.95 1.82
2885 4666 2.298729 GTTGGTGTGTGCCCAAATGTAT 59.701 45.455 0.00 0.00 43.30 2.29
2906 4687 4.339247 TGCTGGAAAAGAAAAAGAGGTCTG 59.661 41.667 0.00 0.00 0.00 3.51
2907 4688 4.536765 TGCTGGAAAAGAAAAAGAGGTCT 58.463 39.130 0.00 0.00 0.00 3.85
2908 4689 4.918810 TGCTGGAAAAGAAAAAGAGGTC 57.081 40.909 0.00 0.00 0.00 3.85
2909 4690 5.876651 AATGCTGGAAAAGAAAAAGAGGT 57.123 34.783 0.00 0.00 0.00 3.85
2910 4691 8.837788 AATTAATGCTGGAAAAGAAAAAGAGG 57.162 30.769 0.00 0.00 0.00 3.69
2912 4693 8.558700 GCAAATTAATGCTGGAAAAGAAAAAGA 58.441 29.630 0.00 0.00 43.06 2.52
2934 4715 4.624015 CAGGCAGAAAGAATGAAAGCAAA 58.376 39.130 0.00 0.00 0.00 3.68
2961 4742 9.900264 CCTATCAATTAAAATTTTAGCAAACGC 57.100 29.630 10.40 0.00 0.00 4.84
3068 4849 1.026718 CCTCATCACGTGGCTTTCCC 61.027 60.000 17.00 0.00 0.00 3.97
3098 4879 5.789643 AACACAAATGGCATAACTCAAGT 57.210 34.783 0.00 0.00 0.00 3.16
3099 4880 8.761575 AATAAACACAAATGGCATAACTCAAG 57.238 30.769 0.00 0.00 0.00 3.02
3135 4916 2.766263 AGACAGGGCATTCATACTCGAA 59.234 45.455 0.00 0.00 0.00 3.71
3143 4924 2.637382 TGTTACTGAGACAGGGCATTCA 59.363 45.455 0.00 0.00 35.51 2.57
3161 4943 6.153340 CCAACTTTCATATGGTGAAGGATGTT 59.847 38.462 2.13 6.03 46.85 2.71
3175 4957 7.473735 TGGCATTGATAAACCAACTTTCATA 57.526 32.000 0.00 0.00 0.00 2.15
3176 4958 6.357579 TGGCATTGATAAACCAACTTTCAT 57.642 33.333 0.00 0.00 0.00 2.57
3177 4959 5.798125 TGGCATTGATAAACCAACTTTCA 57.202 34.783 0.00 0.00 0.00 2.69
3178 4960 8.947055 AATATGGCATTGATAAACCAACTTTC 57.053 30.769 4.78 0.00 35.41 2.62
3180 4962 9.165035 CAAAATATGGCATTGATAAACCAACTT 57.835 29.630 4.78 0.00 35.41 2.66
3182 4964 7.408910 GCAAAATATGGCATTGATAAACCAAC 58.591 34.615 4.78 0.00 35.41 3.77
3183 4965 7.551035 GCAAAATATGGCATTGATAAACCAA 57.449 32.000 4.78 0.00 35.41 3.67
3225 5014 0.882042 CGCTCTTCTGCAACCTGTGT 60.882 55.000 0.00 0.00 0.00 3.72
3303 5092 2.863137 GTGCTTCTTTAGAGCGGATCAG 59.137 50.000 0.00 0.00 0.00 2.90
3388 5177 6.317140 CGACATGGTAACTAGGAGTACTAACA 59.683 42.308 0.00 0.00 37.61 2.41
3492 5281 6.173339 TGGGTTGAGTTTGCAAACAAATAAA 58.827 32.000 36.46 22.03 46.93 1.40
3540 5329 6.672147 AGCAGAAAACTATGCAAACAGTTAG 58.328 36.000 10.91 0.94 45.01 2.34
3545 5334 4.144297 AGGAGCAGAAAACTATGCAAACA 58.856 39.130 0.00 0.00 45.01 2.83
3555 5344 7.041098 TGAGAAAGATGTAAAGGAGCAGAAAAC 60.041 37.037 0.00 0.00 0.00 2.43
3580 5369 9.350357 GCAAAGCAGGATGATAACATAAATATG 57.650 33.333 0.00 0.00 39.69 1.78
3581 5370 9.081204 TGCAAAGCAGGATGATAACATAAATAT 57.919 29.630 0.00 0.00 39.69 1.28
3607 5396 6.128553 CGAATGTACTTAATGTCAAGCTGTGT 60.129 38.462 0.00 0.00 0.00 3.72
3610 5399 5.258622 GCGAATGTACTTAATGTCAAGCTG 58.741 41.667 0.00 0.00 0.00 4.24
3624 5413 0.248907 TAGAGGCAGCGCGAATGTAC 60.249 55.000 12.10 5.42 0.00 2.90
3631 5420 2.860690 TTACACGTAGAGGCAGCGCG 62.861 60.000 0.00 0.00 0.00 6.86
3633 5422 1.922570 ATTTACACGTAGAGGCAGCG 58.077 50.000 0.00 0.00 0.00 5.18
3643 5432 9.659830 GACAGTTTCAGAATAAAATTTACACGT 57.340 29.630 0.00 0.00 0.00 4.49
3644 5433 9.658475 TGACAGTTTCAGAATAAAATTTACACG 57.342 29.630 0.00 0.00 0.00 4.49
3656 5447 5.305585 ACGTAACCATGACAGTTTCAGAAT 58.694 37.500 0.00 0.00 37.77 2.40
3663 5454 2.846193 AGCAACGTAACCATGACAGTT 58.154 42.857 0.00 0.00 0.00 3.16
3667 5458 7.431084 CCAAATAATTAGCAACGTAACCATGAC 59.569 37.037 0.00 0.00 0.00 3.06
3669 5460 7.431084 GTCCAAATAATTAGCAACGTAACCATG 59.569 37.037 0.00 0.00 0.00 3.66
3670 5461 7.121463 TGTCCAAATAATTAGCAACGTAACCAT 59.879 33.333 0.00 0.00 0.00 3.55
3677 5473 6.377327 AGGATGTCCAAATAATTAGCAACG 57.623 37.500 1.30 0.00 38.89 4.10
3678 5474 8.903820 AGTTAGGATGTCCAAATAATTAGCAAC 58.096 33.333 1.30 0.00 38.89 4.17
3696 5492 8.135529 GCAAAAAGTAACAAGTTCAGTTAGGAT 58.864 33.333 0.00 0.00 32.56 3.24
3727 5525 9.474920 CTTATCCAGAAACATTGTTAAAAAGCA 57.525 29.630 1.76 0.00 0.00 3.91
3836 5634 8.721478 GCATGTGTTAGTTGAGATTAAGAAAGA 58.279 33.333 0.00 0.00 0.00 2.52
3891 5689 2.816087 CAGCTCTGCAACCAAGTATGTT 59.184 45.455 0.00 0.00 0.00 2.71
3972 5771 6.294473 GGTAGTATAAAAGTTTAGAGGGGCC 58.706 44.000 0.00 0.00 0.00 5.80
3973 5772 5.987953 CGGTAGTATAAAAGTTTAGAGGGGC 59.012 44.000 0.00 0.00 0.00 5.80
3974 5773 6.982724 CACGGTAGTATAAAAGTTTAGAGGGG 59.017 42.308 0.00 0.00 0.00 4.79
3996 5795 1.266175 ACTTCCTCGCGGTATATCACG 59.734 52.381 6.13 0.00 0.00 4.35
4112 5911 2.642311 TGCATACCCCATCGACCATATT 59.358 45.455 0.00 0.00 0.00 1.28
4126 5925 6.639279 ACATTTGAAACTTAAACGTGCATACC 59.361 34.615 0.00 0.00 0.00 2.73
4188 5987 7.277539 ACAACACATTCATTTACCAGTTTGTTG 59.722 33.333 0.00 0.00 43.56 3.33
4243 6042 6.381994 ACATCAAACATGCATAAATCTCCCTT 59.618 34.615 0.00 0.00 0.00 3.95
4284 6083 4.491676 TGGCGAACTACACTCTACAATTC 58.508 43.478 0.00 0.00 0.00 2.17
4290 6089 4.763793 AGTTAGTTGGCGAACTACACTCTA 59.236 41.667 19.49 2.91 43.09 2.43
4337 6136 1.140312 TCCCTCATGGTGCTAATCCC 58.860 55.000 0.00 0.00 34.77 3.85
4347 6146 0.256752 TCTGTTGGCATCCCTCATGG 59.743 55.000 0.00 0.00 32.37 3.66
4374 6173 3.982516 AGTGTTCCCTCATAGACTAGCA 58.017 45.455 0.00 0.00 0.00 3.49
4375 6174 5.009210 CAGTAGTGTTCCCTCATAGACTAGC 59.991 48.000 0.00 0.00 0.00 3.42
4383 6182 6.901300 TCCTTAATACAGTAGTGTTCCCTCAT 59.099 38.462 8.85 0.00 38.19 2.90
4415 6243 9.599866 CAAACATGTTAGACTCCTACATAATCA 57.400 33.333 12.39 0.00 0.00 2.57
4422 6250 6.038997 AGTCCAAACATGTTAGACTCCTAC 57.961 41.667 26.79 12.53 33.62 3.18
4456 6284 1.046204 AGCCATTAGGTACGCCCTAC 58.954 55.000 1.07 0.00 45.82 3.18
4465 6293 1.133792 GTGCATGGGTAGCCATTAGGT 60.134 52.381 23.84 0.24 37.19 3.08
4471 6299 5.834281 TTTATATAGTGCATGGGTAGCCA 57.166 39.130 17.55 17.55 0.00 4.75
4509 6338 8.738645 AGAATTCTTCATACTGGGTTGATTAC 57.261 34.615 0.88 0.00 0.00 1.89
4519 6348 8.260818 TGGGAGAAAGTAGAATTCTTCATACTG 58.739 37.037 14.36 0.00 37.26 2.74
4536 6365 2.887152 CAAAGGTTGGAGTGGGAGAAAG 59.113 50.000 0.00 0.00 0.00 2.62
4569 6398 1.770658 CCAGATGGAATGGCTGTAGGA 59.229 52.381 0.00 0.00 37.39 2.94
4685 6514 3.498397 TCCTGTTTTCTTCAACGAGCATC 59.502 43.478 0.00 0.00 0.00 3.91
4723 6552 7.102993 TGAAGTTGCACAAGTAGCTAATATCA 58.897 34.615 0.00 0.00 0.00 2.15
4821 6652 4.804139 AGTGTCGTCAAAGTTGAGTAGTTG 59.196 41.667 0.00 0.00 37.98 3.16
4822 6653 5.007385 AGTGTCGTCAAAGTTGAGTAGTT 57.993 39.130 0.00 0.00 37.98 2.24
4823 6654 4.650754 AGTGTCGTCAAAGTTGAGTAGT 57.349 40.909 0.00 0.00 37.98 2.73
4826 6657 3.596214 ACAAGTGTCGTCAAAGTTGAGT 58.404 40.909 0.00 0.00 37.98 3.41
4827 6658 4.494199 GGAACAAGTGTCGTCAAAGTTGAG 60.494 45.833 0.00 0.00 37.98 3.02
4828 6659 3.372822 GGAACAAGTGTCGTCAAAGTTGA 59.627 43.478 7.37 0.00 34.20 3.18
4829 6660 3.126171 TGGAACAAGTGTCGTCAAAGTTG 59.874 43.478 1.68 1.36 31.92 3.16
4830 6661 3.126343 GTGGAACAAGTGTCGTCAAAGTT 59.874 43.478 0.00 0.00 44.16 2.66
4831 6662 2.676342 GTGGAACAAGTGTCGTCAAAGT 59.324 45.455 0.00 0.00 44.16 2.66
4867 6749 6.820656 AGAAACTGTTAGGAATGTGCATCTAG 59.179 38.462 0.00 0.00 0.00 2.43
4880 6762 8.558973 AAAGATCATCAAGAGAAACTGTTAGG 57.441 34.615 0.00 0.00 0.00 2.69
4921 6816 1.135315 CGTTCGCATGCCTCCTTTG 59.865 57.895 13.15 0.00 0.00 2.77
5027 6924 9.640963 CTAGTGCACAAACTCTTATAAGTAACT 57.359 33.333 21.04 6.65 0.00 2.24
5038 6935 4.939052 AGTACACTAGTGCACAAACTCT 57.061 40.909 24.71 5.66 32.20 3.24
5039 6936 5.062308 GCATAGTACACTAGTGCACAAACTC 59.938 44.000 24.71 8.74 35.27 3.01
5040 6937 4.929808 GCATAGTACACTAGTGCACAAACT 59.070 41.667 24.71 19.41 35.27 2.66
5052 6949 5.715279 TGAAGAGTAACTGGCATAGTACACT 59.285 40.000 0.00 7.04 39.18 3.55
5063 6960 7.388776 TGACTTTCATCAATGAAGAGTAACTGG 59.611 37.037 14.73 0.00 46.34 4.00
5193 7090 8.454106 AGCACATCATTGAATAAGTAGTGTTTC 58.546 33.333 0.00 0.00 0.00 2.78
5194 7091 8.340618 AGCACATCATTGAATAAGTAGTGTTT 57.659 30.769 0.00 0.00 0.00 2.83
5206 7103 3.119280 CCATCTGCAAGCACATCATTGAA 60.119 43.478 0.00 0.00 0.00 2.69
5213 7110 4.500887 GCAATTATCCATCTGCAAGCACAT 60.501 41.667 0.00 0.00 34.87 3.21
5215 7112 3.378339 GCAATTATCCATCTGCAAGCAC 58.622 45.455 0.00 0.00 34.87 4.40
5337 7234 3.077359 AGAAAAATTCCGCAGTCAGGAG 58.923 45.455 0.00 0.00 39.22 3.69
5369 7269 8.522830 AGAATCCACATTTCACGACAATAAAAT 58.477 29.630 0.00 0.00 0.00 1.82
5400 7300 5.724328 TCATCAGAGCTTCGTTTTACTCAT 58.276 37.500 0.00 0.00 0.00 2.90
5401 7301 5.134202 TCATCAGAGCTTCGTTTTACTCA 57.866 39.130 0.00 0.00 0.00 3.41
5402 7302 6.654793 AATCATCAGAGCTTCGTTTTACTC 57.345 37.500 0.00 0.00 0.00 2.59
5403 7303 7.324178 ACTAATCATCAGAGCTTCGTTTTACT 58.676 34.615 0.00 0.00 0.00 2.24
5404 7304 7.527084 ACTAATCATCAGAGCTTCGTTTTAC 57.473 36.000 0.00 0.00 0.00 2.01
5405 7305 7.064609 CCAACTAATCATCAGAGCTTCGTTTTA 59.935 37.037 0.00 0.00 0.00 1.52
5406 7306 6.128172 CCAACTAATCATCAGAGCTTCGTTTT 60.128 38.462 0.00 0.00 0.00 2.43
5411 7311 4.775236 ACCCAACTAATCATCAGAGCTTC 58.225 43.478 0.00 0.00 0.00 3.86
5419 7319 6.435292 AGTACCCATACCCAACTAATCATC 57.565 41.667 0.00 0.00 30.88 2.92
5423 7323 6.847567 TGTGATAGTACCCATACCCAACTAAT 59.152 38.462 0.00 0.00 30.88 1.73
5428 7328 4.363573 TGTGTGATAGTACCCATACCCAA 58.636 43.478 0.00 0.00 30.88 4.12
5445 7345 5.391310 GGTTCTCATCTAATGCTGTTGTGTG 60.391 44.000 0.00 0.00 0.00 3.82
5448 7348 3.935203 CGGTTCTCATCTAATGCTGTTGT 59.065 43.478 0.00 0.00 0.00 3.32
5451 7351 4.679373 ATCGGTTCTCATCTAATGCTGT 57.321 40.909 0.00 0.00 0.00 4.40
5469 7369 4.444388 CGGATGTTGTAGGACACATAATCG 59.556 45.833 0.00 0.00 36.90 3.34
5524 7424 5.915196 GGTTTGCAGTAGAGTTCAATTTCAC 59.085 40.000 0.00 0.00 0.00 3.18
5567 7475 7.047891 TGACTATGTTCCACCTATGTGATTTC 58.952 38.462 0.00 0.00 45.76 2.17
5578 7486 6.497259 TCCTATATCCTTGACTATGTTCCACC 59.503 42.308 0.00 0.00 0.00 4.61
5601 7512 6.627287 GCCATATTTGGTTGTAAAGGAACTCC 60.627 42.308 4.00 0.00 45.57 3.85
5602 7513 6.071616 TGCCATATTTGGTTGTAAAGGAACTC 60.072 38.462 4.00 0.00 45.57 3.01
5612 7523 5.936187 TGAATGATGCCATATTTGGTTGT 57.064 34.783 4.00 0.00 45.57 3.32
5625 7536 8.517878 AGCCATTTAACATAGTATGAATGATGC 58.482 33.333 17.13 13.77 0.00 3.91
5678 7590 1.141657 GGTATCCTCAGCATGCTCCAA 59.858 52.381 19.68 5.46 34.76 3.53
5692 7604 1.139853 CAGGCACTTCTCTGGGTATCC 59.860 57.143 0.00 0.00 34.60 2.59
5694 7606 1.207791 CCAGGCACTTCTCTGGGTAT 58.792 55.000 0.00 0.00 44.99 2.73
5710 7622 6.573664 TTGGTCACTGATAACATTTTCCAG 57.426 37.500 0.00 0.00 0.00 3.86
5766 7678 8.879759 GTTCATATCTCCAATCGTCTAACAAAA 58.120 33.333 0.00 0.00 0.00 2.44
5777 7689 5.406780 CGGCTACTTGTTCATATCTCCAATC 59.593 44.000 0.00 0.00 0.00 2.67
5800 7712 0.248458 AAGTGGCAGAAAAACGTGCG 60.248 50.000 0.00 0.00 40.82 5.34
5818 7825 5.476254 TGCCACACATTTCTGATATGAACAA 59.524 36.000 13.85 0.00 0.00 2.83
5821 7828 5.711506 ACTTGCCACACATTTCTGATATGAA 59.288 36.000 13.85 0.00 0.00 2.57
5822 7829 5.255687 ACTTGCCACACATTTCTGATATGA 58.744 37.500 13.85 0.00 0.00 2.15
5823 7830 5.571784 ACTTGCCACACATTTCTGATATG 57.428 39.130 6.56 6.56 0.00 1.78
5824 7831 5.948162 AGAACTTGCCACACATTTCTGATAT 59.052 36.000 0.00 0.00 32.41 1.63
5825 7832 5.316167 AGAACTTGCCACACATTTCTGATA 58.684 37.500 0.00 0.00 32.41 2.15
5869 7887 7.624549 ACGGGCATAATATCAGAATTGTAGAT 58.375 34.615 0.00 0.00 0.00 1.98
5887 7905 7.285401 ACAAGAAATAATAAAGATGACGGGCAT 59.715 33.333 0.00 0.00 40.77 4.40
5944 7969 8.565896 TGCAATAAGAAATAACAGAGTCACAT 57.434 30.769 0.00 0.00 0.00 3.21
5947 7972 8.886719 CATCTGCAATAAGAAATAACAGAGTCA 58.113 33.333 0.00 0.00 36.25 3.41
6112 8138 8.627208 AAGCAATTGTCTAAGAAAAGAGATGA 57.373 30.769 7.40 0.00 0.00 2.92
6142 8168 2.962191 GCACGTAACAACGCTGTAAAAG 59.038 45.455 0.00 0.00 33.45 2.27
6160 8186 4.710423 TGAGAGTAGATTGTCAGAGCAC 57.290 45.455 0.00 0.00 0.00 4.40
6289 8315 1.944676 GCTGTTCCTATCGCGGTCG 60.945 63.158 6.13 0.00 0.00 4.79
6327 8353 2.184579 GGCCTCCTTTCTCGTCGG 59.815 66.667 0.00 0.00 0.00 4.79
6342 8368 2.259511 CCTCTTTGCTTTGCCGGC 59.740 61.111 22.73 22.73 0.00 6.13
6358 8384 2.358737 CCTCGGCTCACAACACCC 60.359 66.667 0.00 0.00 0.00 4.61
6359 8385 1.374758 CTCCTCGGCTCACAACACC 60.375 63.158 0.00 0.00 0.00 4.16
6363 8389 2.636412 CGACCTCCTCGGCTCACAA 61.636 63.158 0.00 0.00 38.87 3.33
6391 8417 1.040893 TGTCGTGACTGTGGTGGTCT 61.041 55.000 1.23 0.00 35.04 3.85
6487 8513 1.334160 TGTAGTCTTCTTCACCGCCA 58.666 50.000 0.00 0.00 0.00 5.69
6489 8515 2.155155 CGTTTGTAGTCTTCTTCACCGC 59.845 50.000 0.00 0.00 0.00 5.68
6569 8595 1.588932 CACGGTCATCATCGTCCCG 60.589 63.158 0.00 0.00 44.06 5.14
6684 8710 2.203832 TCTCCCTGTGCCTGCTGA 60.204 61.111 0.00 0.00 0.00 4.26
6685 8711 2.268280 CTCTCCCTGTGCCTGCTG 59.732 66.667 0.00 0.00 0.00 4.41
6780 8806 5.869888 CCTTTCAAGCTACATCGTAAACTCT 59.130 40.000 0.00 0.00 0.00 3.24
6965 9005 0.108186 ATGTTCGCGGCAGATGAGAA 60.108 50.000 6.13 0.00 0.00 2.87
6968 9008 0.726827 GAAATGTTCGCGGCAGATGA 59.273 50.000 6.13 0.00 0.00 2.92
6970 9010 0.729116 CAGAAATGTTCGCGGCAGAT 59.271 50.000 6.13 0.00 34.02 2.90
7030 9070 7.898014 AAATCACTGGAAGAAAAAGGTAAGT 57.102 32.000 0.00 0.00 37.43 2.24
7139 9180 9.092338 ACCCGTAATAACCCTTTTATTTCTTTT 57.908 29.630 0.00 0.00 0.00 2.27
7185 9228 1.066716 ACGGCGTTAGGCTATTTGACA 60.067 47.619 6.77 0.00 42.94 3.58
7201 9244 3.297830 AAAAGGACAAGCAATAACGGC 57.702 42.857 0.00 0.00 0.00 5.68
7224 9267 7.141363 CCTTTTCATAACTGAACTTTGTGGAG 58.859 38.462 0.00 0.00 41.05 3.86
7233 9276 6.039382 ACACTTGTCCCTTTTCATAACTGAAC 59.961 38.462 0.00 0.00 41.05 3.18
7282 9325 6.633856 CAAGATCCCCTCAAAAAGGTTATTG 58.366 40.000 0.00 0.00 44.56 1.90
7405 9456 0.756294 TTTCCACTCCAGAACGCTCA 59.244 50.000 0.00 0.00 0.00 4.26
7411 9462 3.587498 TCTCTTCCTTTCCACTCCAGAA 58.413 45.455 0.00 0.00 0.00 3.02
7417 9468 3.812167 GCACCATTCTCTTCCTTTCCACT 60.812 47.826 0.00 0.00 0.00 4.00
7518 9571 2.930826 TTCCAACTTCTGTCAGACCC 57.069 50.000 0.78 0.00 0.00 4.46
7520 9573 5.172205 GGACTATTCCAACTTCTGTCAGAC 58.828 45.833 0.78 0.00 42.30 3.51
7525 9611 3.650942 TGTGGGACTATTCCAACTTCTGT 59.349 43.478 8.06 0.00 45.53 3.41
7568 9654 4.256180 GTAGCGGGATGGCAGGGG 62.256 72.222 0.00 0.00 34.64 4.79
7601 9687 4.273005 TGCTTGAGTTTGAAACGAAGAC 57.727 40.909 20.09 13.89 36.23 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.