Multiple sequence alignment - TraesCS7A01G468800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G468800 chr7A 100.000 2273 0 0 1 2273 664839940 664842212 0.000000e+00 4198.0
1 TraesCS7A01G468800 chr7A 93.982 1130 65 3 175 1303 274578229 274579356 0.000000e+00 1707.0
2 TraesCS7A01G468800 chr7A 92.851 1133 76 5 175 1305 538864063 538865192 0.000000e+00 1639.0
3 TraesCS7A01G468800 chr7A 85.513 497 57 5 1522 2004 664537933 664537438 2.610000e-139 505.0
4 TraesCS7A01G468800 chr7A 98.256 172 3 0 1 172 705397745 705397574 3.670000e-78 302.0
5 TraesCS7A01G468800 chr7A 80.702 399 47 13 1359 1728 664640817 664640420 1.330000e-72 283.0
6 TraesCS7A01G468800 chr7A 80.597 268 37 6 1555 1809 664674887 664674622 2.300000e-45 193.0
7 TraesCS7A01G468800 chr3D 94.908 1139 50 5 175 1312 444478564 444477433 0.000000e+00 1775.0
8 TraesCS7A01G468800 chr3B 90.026 1133 108 5 175 1305 783709769 783710898 0.000000e+00 1461.0
9 TraesCS7A01G468800 chr3B 98.092 262 5 0 2005 2266 814837555 814837294 7.400000e-125 457.0
10 TraesCS7A01G468800 chr4A 89.744 1131 113 3 175 1303 581185520 581186649 0.000000e+00 1443.0
11 TraesCS7A01G468800 chr4A 89.437 1136 103 11 175 1305 695023051 695021928 0.000000e+00 1417.0
12 TraesCS7A01G468800 chr4A 97.765 179 4 0 3 181 584644128 584644306 2.190000e-80 309.0
13 TraesCS7A01G468800 chr4A 96.629 178 6 0 1 178 500809600 500809423 1.710000e-76 296.0
14 TraesCS7A01G468800 chr1A 89.683 1134 113 4 175 1306 563660679 563661810 0.000000e+00 1443.0
15 TraesCS7A01G468800 chr1A 96.648 179 5 1 1 179 43734678 43734501 1.710000e-76 296.0
16 TraesCS7A01G468800 chrUn 88.987 1135 122 3 175 1308 23283072 23281940 0.000000e+00 1400.0
17 TraesCS7A01G468800 chr2D 87.179 1131 143 2 176 1305 613451746 613450617 0.000000e+00 1284.0
18 TraesCS7A01G468800 chr7D 87.500 672 61 12 1354 2004 575008210 575008879 0.000000e+00 754.0
19 TraesCS7A01G468800 chr7D 84.314 153 22 2 1853 2004 574863819 574863668 5.060000e-32 148.0
20 TraesCS7A01G468800 chr2B 99.231 260 2 0 2005 2264 298558848 298559107 9.510000e-129 470.0
21 TraesCS7A01G468800 chr2B 98.828 256 3 0 2005 2260 608697039 608697294 7.400000e-125 457.0
22 TraesCS7A01G468800 chr7B 99.609 256 1 0 2005 2260 677059098 677059353 3.420000e-128 468.0
23 TraesCS7A01G468800 chr7B 98.837 258 3 0 2005 2262 488783391 488783648 5.720000e-126 460.0
24 TraesCS7A01G468800 chr7B 97.719 263 5 1 2005 2267 117799332 117799071 3.440000e-123 451.0
25 TraesCS7A01G468800 chr7B 86.150 361 31 10 1361 1708 635250965 635250611 2.760000e-99 372.0
26 TraesCS7A01G468800 chr7B 88.696 115 13 0 1354 1468 635111149 635111035 8.460000e-30 141.0
27 TraesCS7A01G468800 chr7B 74.307 397 63 17 1519 1903 635110951 635110582 5.090000e-27 132.0
28 TraesCS7A01G468800 chr7B 100.000 34 0 0 1746 1779 635110775 635110742 1.880000e-06 63.9
29 TraesCS7A01G468800 chr4B 98.837 258 3 0 2005 2262 623405918 623406175 5.720000e-126 460.0
30 TraesCS7A01G468800 chr6B 98.450 258 4 0 2005 2262 91038120 91037863 2.660000e-124 455.0
31 TraesCS7A01G468800 chr1B 97.719 263 2 1 2005 2263 2112890 2112628 1.240000e-122 449.0
32 TraesCS7A01G468800 chr3A 98.837 172 2 0 1 172 457106999 457107170 7.890000e-80 307.0
33 TraesCS7A01G468800 chr3A 98.837 172 2 0 1 172 584300917 584300746 7.890000e-80 307.0
34 TraesCS7A01G468800 chr3A 98.256 172 3 0 1 172 524411912 524411741 3.670000e-78 302.0
35 TraesCS7A01G468800 chr6A 98.256 172 3 0 1 172 541498690 541498861 3.670000e-78 302.0
36 TraesCS7A01G468800 chr5A 97.143 175 5 0 1 175 411796719 411796545 1.710000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G468800 chr7A 664839940 664842212 2272 False 4198 4198 100.000 1 2273 1 chr7A.!!$F3 2272
1 TraesCS7A01G468800 chr7A 274578229 274579356 1127 False 1707 1707 93.982 175 1303 1 chr7A.!!$F1 1128
2 TraesCS7A01G468800 chr7A 538864063 538865192 1129 False 1639 1639 92.851 175 1305 1 chr7A.!!$F2 1130
3 TraesCS7A01G468800 chr3D 444477433 444478564 1131 True 1775 1775 94.908 175 1312 1 chr3D.!!$R1 1137
4 TraesCS7A01G468800 chr3B 783709769 783710898 1129 False 1461 1461 90.026 175 1305 1 chr3B.!!$F1 1130
5 TraesCS7A01G468800 chr4A 581185520 581186649 1129 False 1443 1443 89.744 175 1303 1 chr4A.!!$F1 1128
6 TraesCS7A01G468800 chr4A 695021928 695023051 1123 True 1417 1417 89.437 175 1305 1 chr4A.!!$R2 1130
7 TraesCS7A01G468800 chr1A 563660679 563661810 1131 False 1443 1443 89.683 175 1306 1 chr1A.!!$F1 1131
8 TraesCS7A01G468800 chrUn 23281940 23283072 1132 True 1400 1400 88.987 175 1308 1 chrUn.!!$R1 1133
9 TraesCS7A01G468800 chr2D 613450617 613451746 1129 True 1284 1284 87.179 176 1305 1 chr2D.!!$R1 1129
10 TraesCS7A01G468800 chr7D 575008210 575008879 669 False 754 754 87.500 1354 2004 1 chr7D.!!$F1 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.327 AGAGATGTCCTTGGGGAGGG 60.327 60.0 0.0 0.0 46.31 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 1505 0.040058 ATCATGCTTGTGCCCTCCAA 59.96 50.0 0.0 0.0 38.71 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.893241 CGTCGAGTGGTTGTTTGC 57.107 55.556 0.00 0.00 0.00 3.68
18 19 2.010670 CGTCGAGTGGTTGTTTGCA 58.989 52.632 0.00 0.00 0.00 4.08
19 20 0.586319 CGTCGAGTGGTTGTTTGCAT 59.414 50.000 0.00 0.00 0.00 3.96
20 21 1.795872 CGTCGAGTGGTTGTTTGCATA 59.204 47.619 0.00 0.00 0.00 3.14
21 22 2.159841 CGTCGAGTGGTTGTTTGCATAG 60.160 50.000 0.00 0.00 0.00 2.23
22 23 2.806244 GTCGAGTGGTTGTTTGCATAGT 59.194 45.455 0.00 0.00 0.00 2.12
23 24 3.064207 TCGAGTGGTTGTTTGCATAGTC 58.936 45.455 0.00 0.00 0.00 2.59
24 25 2.159841 CGAGTGGTTGTTTGCATAGTCG 60.160 50.000 0.00 0.00 0.00 4.18
25 26 3.064207 GAGTGGTTGTTTGCATAGTCGA 58.936 45.455 0.00 0.00 0.00 4.20
26 27 3.067106 AGTGGTTGTTTGCATAGTCGAG 58.933 45.455 0.00 0.00 0.00 4.04
27 28 2.806244 GTGGTTGTTTGCATAGTCGAGT 59.194 45.455 0.00 0.00 0.00 4.18
28 29 2.805671 TGGTTGTTTGCATAGTCGAGTG 59.194 45.455 2.10 0.00 0.00 3.51
29 30 2.806244 GGTTGTTTGCATAGTCGAGTGT 59.194 45.455 2.10 0.00 0.00 3.55
30 31 3.120649 GGTTGTTTGCATAGTCGAGTGTC 60.121 47.826 2.10 0.00 0.00 3.67
31 32 3.660501 TGTTTGCATAGTCGAGTGTCT 57.339 42.857 2.10 0.00 0.00 3.41
32 33 3.990092 TGTTTGCATAGTCGAGTGTCTT 58.010 40.909 2.10 0.00 0.00 3.01
33 34 3.987868 TGTTTGCATAGTCGAGTGTCTTC 59.012 43.478 2.10 0.00 0.00 2.87
34 35 4.238514 GTTTGCATAGTCGAGTGTCTTCT 58.761 43.478 2.10 0.00 0.00 2.85
35 36 5.048294 TGTTTGCATAGTCGAGTGTCTTCTA 60.048 40.000 2.10 0.00 0.00 2.10
36 37 5.836821 TTGCATAGTCGAGTGTCTTCTAT 57.163 39.130 2.10 0.00 0.00 1.98
37 38 6.937436 TTGCATAGTCGAGTGTCTTCTATA 57.063 37.500 2.10 0.00 0.00 1.31
38 39 7.511959 TTGCATAGTCGAGTGTCTTCTATAT 57.488 36.000 2.10 0.00 0.00 0.86
39 40 7.511959 TGCATAGTCGAGTGTCTTCTATATT 57.488 36.000 2.10 0.00 0.00 1.28
40 41 7.363431 TGCATAGTCGAGTGTCTTCTATATTG 58.637 38.462 2.10 0.00 0.00 1.90
41 42 7.013369 TGCATAGTCGAGTGTCTTCTATATTGT 59.987 37.037 2.10 0.00 0.00 2.71
42 43 7.535940 GCATAGTCGAGTGTCTTCTATATTGTC 59.464 40.741 2.10 0.00 0.00 3.18
43 44 6.050454 AGTCGAGTGTCTTCTATATTGTCG 57.950 41.667 0.00 0.00 0.00 4.35
44 45 5.816258 AGTCGAGTGTCTTCTATATTGTCGA 59.184 40.000 0.00 0.00 0.00 4.20
45 46 6.018588 AGTCGAGTGTCTTCTATATTGTCGAG 60.019 42.308 0.00 0.00 34.83 4.04
46 47 5.816258 TCGAGTGTCTTCTATATTGTCGAGT 59.184 40.000 0.00 0.00 30.90 4.18
47 48 5.904630 CGAGTGTCTTCTATATTGTCGAGTG 59.095 44.000 0.00 0.00 0.00 3.51
48 49 6.137794 AGTGTCTTCTATATTGTCGAGTGG 57.862 41.667 0.00 0.00 0.00 4.00
49 50 5.886474 AGTGTCTTCTATATTGTCGAGTGGA 59.114 40.000 0.00 0.00 0.00 4.02
50 51 6.377429 AGTGTCTTCTATATTGTCGAGTGGAA 59.623 38.462 0.00 0.00 0.00 3.53
51 52 6.472808 GTGTCTTCTATATTGTCGAGTGGAAC 59.527 42.308 0.00 0.00 0.00 3.62
52 53 6.152154 TGTCTTCTATATTGTCGAGTGGAACA 59.848 38.462 0.00 0.00 41.43 3.18
53 54 7.147897 TGTCTTCTATATTGTCGAGTGGAACAT 60.148 37.037 0.00 0.00 44.52 2.71
54 55 8.350722 GTCTTCTATATTGTCGAGTGGAACATA 58.649 37.037 0.00 0.00 44.52 2.29
55 56 8.568794 TCTTCTATATTGTCGAGTGGAACATAG 58.431 37.037 0.00 0.00 44.52 2.23
56 57 6.678878 TCTATATTGTCGAGTGGAACATAGC 58.321 40.000 0.00 0.00 44.52 2.97
57 58 3.895232 ATTGTCGAGTGGAACATAGCT 57.105 42.857 0.00 0.00 44.52 3.32
58 59 3.678056 TTGTCGAGTGGAACATAGCTT 57.322 42.857 0.00 0.00 44.52 3.74
59 60 3.232213 TGTCGAGTGGAACATAGCTTC 57.768 47.619 0.00 0.00 44.52 3.86
60 61 2.560981 TGTCGAGTGGAACATAGCTTCA 59.439 45.455 0.00 0.00 44.52 3.02
61 62 2.924290 GTCGAGTGGAACATAGCTTCAC 59.076 50.000 0.00 0.00 44.52 3.18
62 63 1.920574 CGAGTGGAACATAGCTTCACG 59.079 52.381 0.00 0.00 44.52 4.35
63 64 2.271800 GAGTGGAACATAGCTTCACGG 58.728 52.381 0.00 0.00 44.52 4.94
64 65 1.623811 AGTGGAACATAGCTTCACGGT 59.376 47.619 0.00 0.00 44.52 4.83
65 66 2.000447 GTGGAACATAGCTTCACGGTC 59.000 52.381 0.00 0.00 44.52 4.79
66 67 1.278238 GGAACATAGCTTCACGGTCG 58.722 55.000 0.00 0.00 0.00 4.79
67 68 1.135199 GGAACATAGCTTCACGGTCGA 60.135 52.381 0.00 0.00 0.00 4.20
68 69 2.186076 GAACATAGCTTCACGGTCGAG 58.814 52.381 0.00 0.00 0.00 4.04
69 70 1.174783 ACATAGCTTCACGGTCGAGT 58.825 50.000 0.00 0.00 0.00 4.18
70 71 1.135373 ACATAGCTTCACGGTCGAGTG 60.135 52.381 0.00 0.00 43.11 3.51
71 72 0.456221 ATAGCTTCACGGTCGAGTGG 59.544 55.000 5.11 0.00 42.10 4.00
72 73 0.607217 TAGCTTCACGGTCGAGTGGA 60.607 55.000 5.11 0.00 42.10 4.02
73 74 1.215647 GCTTCACGGTCGAGTGGAT 59.784 57.895 5.11 0.00 42.10 3.41
74 75 1.078759 GCTTCACGGTCGAGTGGATG 61.079 60.000 5.11 0.00 42.10 3.51
75 76 0.526211 CTTCACGGTCGAGTGGATGA 59.474 55.000 5.11 0.00 42.10 2.92
76 77 1.135139 CTTCACGGTCGAGTGGATGAT 59.865 52.381 5.11 0.00 42.10 2.45
77 78 0.455815 TCACGGTCGAGTGGATGATG 59.544 55.000 5.11 0.00 42.10 3.07
78 79 0.455815 CACGGTCGAGTGGATGATGA 59.544 55.000 0.00 0.00 38.40 2.92
79 80 1.067669 CACGGTCGAGTGGATGATGAT 59.932 52.381 0.00 0.00 38.40 2.45
80 81 1.757118 ACGGTCGAGTGGATGATGATT 59.243 47.619 0.00 0.00 0.00 2.57
81 82 2.168521 ACGGTCGAGTGGATGATGATTT 59.831 45.455 0.00 0.00 0.00 2.17
82 83 3.198068 CGGTCGAGTGGATGATGATTTT 58.802 45.455 0.00 0.00 0.00 1.82
83 84 3.001634 CGGTCGAGTGGATGATGATTTTG 59.998 47.826 0.00 0.00 0.00 2.44
84 85 3.242870 GGTCGAGTGGATGATGATTTTGC 60.243 47.826 0.00 0.00 0.00 3.68
85 86 3.624861 GTCGAGTGGATGATGATTTTGCT 59.375 43.478 0.00 0.00 0.00 3.91
86 87 4.095483 GTCGAGTGGATGATGATTTTGCTT 59.905 41.667 0.00 0.00 0.00 3.91
87 88 4.333649 TCGAGTGGATGATGATTTTGCTTC 59.666 41.667 0.00 0.00 0.00 3.86
88 89 4.595116 GAGTGGATGATGATTTTGCTTCG 58.405 43.478 0.00 0.00 0.00 3.79
89 90 4.264253 AGTGGATGATGATTTTGCTTCGA 58.736 39.130 0.00 0.00 0.00 3.71
90 91 4.095483 AGTGGATGATGATTTTGCTTCGAC 59.905 41.667 0.00 0.00 0.00 4.20
91 92 3.378112 TGGATGATGATTTTGCTTCGACC 59.622 43.478 0.00 0.00 0.00 4.79
92 93 3.546815 GGATGATGATTTTGCTTCGACCG 60.547 47.826 0.00 0.00 0.00 4.79
93 94 1.130373 TGATGATTTTGCTTCGACCGC 59.870 47.619 0.00 0.00 0.00 5.68
94 95 1.398390 GATGATTTTGCTTCGACCGCT 59.602 47.619 7.33 0.00 0.00 5.52
95 96 1.234821 TGATTTTGCTTCGACCGCTT 58.765 45.000 7.33 0.00 0.00 4.68
96 97 1.196808 TGATTTTGCTTCGACCGCTTC 59.803 47.619 7.33 1.43 0.00 3.86
97 98 1.464997 GATTTTGCTTCGACCGCTTCT 59.535 47.619 7.33 0.00 0.00 2.85
98 99 0.586319 TTTTGCTTCGACCGCTTCTG 59.414 50.000 7.33 0.00 0.00 3.02
99 100 1.227999 TTTGCTTCGACCGCTTCTGG 61.228 55.000 7.33 0.00 0.00 3.86
101 102 1.668151 GCTTCGACCGCTTCTGGTT 60.668 57.895 0.00 0.00 44.01 3.67
102 103 1.627550 GCTTCGACCGCTTCTGGTTC 61.628 60.000 0.00 0.00 44.01 3.62
103 104 1.005394 TTCGACCGCTTCTGGTTCC 60.005 57.895 0.00 0.00 44.01 3.62
104 105 1.469335 TTCGACCGCTTCTGGTTCCT 61.469 55.000 0.00 0.00 44.01 3.36
105 106 1.004918 CGACCGCTTCTGGTTCCTT 60.005 57.895 0.00 0.00 44.01 3.36
106 107 0.602905 CGACCGCTTCTGGTTCCTTT 60.603 55.000 0.00 0.00 44.01 3.11
107 108 1.337447 CGACCGCTTCTGGTTCCTTTA 60.337 52.381 0.00 0.00 44.01 1.85
108 109 2.347731 GACCGCTTCTGGTTCCTTTAG 58.652 52.381 0.00 0.00 44.01 1.85
109 110 1.975680 ACCGCTTCTGGTTCCTTTAGA 59.024 47.619 0.00 0.00 39.99 2.10
110 111 2.028020 ACCGCTTCTGGTTCCTTTAGAG 60.028 50.000 0.00 0.00 39.99 2.43
111 112 2.233922 CCGCTTCTGGTTCCTTTAGAGA 59.766 50.000 0.00 0.00 0.00 3.10
112 113 3.118592 CCGCTTCTGGTTCCTTTAGAGAT 60.119 47.826 0.00 0.00 0.00 2.75
113 114 3.868077 CGCTTCTGGTTCCTTTAGAGATG 59.132 47.826 0.00 0.00 0.00 2.90
114 115 4.621747 CGCTTCTGGTTCCTTTAGAGATGT 60.622 45.833 0.00 0.00 0.00 3.06
115 116 4.873259 GCTTCTGGTTCCTTTAGAGATGTC 59.127 45.833 0.00 0.00 0.00 3.06
116 117 5.422214 TTCTGGTTCCTTTAGAGATGTCC 57.578 43.478 0.00 0.00 0.00 4.02
117 118 4.689062 TCTGGTTCCTTTAGAGATGTCCT 58.311 43.478 0.00 0.00 0.00 3.85
118 119 5.094387 TCTGGTTCCTTTAGAGATGTCCTT 58.906 41.667 0.00 0.00 0.00 3.36
119 120 5.046304 TCTGGTTCCTTTAGAGATGTCCTTG 60.046 44.000 0.00 0.00 0.00 3.61
120 121 4.019321 TGGTTCCTTTAGAGATGTCCTTGG 60.019 45.833 0.00 0.00 0.00 3.61
121 122 4.518249 GTTCCTTTAGAGATGTCCTTGGG 58.482 47.826 0.00 0.00 0.00 4.12
122 123 3.115390 TCCTTTAGAGATGTCCTTGGGG 58.885 50.000 0.00 0.00 0.00 4.96
123 124 3.115390 CCTTTAGAGATGTCCTTGGGGA 58.885 50.000 0.00 0.00 39.70 4.81
124 125 3.135530 CCTTTAGAGATGTCCTTGGGGAG 59.864 52.174 0.00 0.00 43.12 4.30
126 127 0.327000 AGAGATGTCCTTGGGGAGGG 60.327 60.000 0.00 0.00 46.31 4.30
127 128 0.621862 GAGATGTCCTTGGGGAGGGT 60.622 60.000 0.00 0.00 46.31 4.34
128 129 0.722676 AGATGTCCTTGGGGAGGGTA 59.277 55.000 0.00 0.00 46.31 3.69
129 130 1.298382 AGATGTCCTTGGGGAGGGTAT 59.702 52.381 0.00 0.00 46.31 2.73
130 131 1.700186 GATGTCCTTGGGGAGGGTATC 59.300 57.143 0.00 0.00 46.31 2.24
131 132 0.722676 TGTCCTTGGGGAGGGTATCT 59.277 55.000 0.00 0.00 46.31 1.98
132 133 1.082194 TGTCCTTGGGGAGGGTATCTT 59.918 52.381 0.00 0.00 46.31 2.40
133 134 1.490910 GTCCTTGGGGAGGGTATCTTG 59.509 57.143 0.00 0.00 46.31 3.02
134 135 0.846693 CCTTGGGGAGGGTATCTTGG 59.153 60.000 0.00 0.00 42.26 3.61
135 136 1.628043 CCTTGGGGAGGGTATCTTGGA 60.628 57.143 0.00 0.00 42.26 3.53
136 137 1.490910 CTTGGGGAGGGTATCTTGGAC 59.509 57.143 0.00 0.00 0.00 4.02
137 138 0.419865 TGGGGAGGGTATCTTGGACA 59.580 55.000 0.00 0.00 0.00 4.02
138 139 1.132500 GGGGAGGGTATCTTGGACAG 58.868 60.000 0.00 0.00 0.00 3.51
139 140 1.344087 GGGGAGGGTATCTTGGACAGA 60.344 57.143 0.00 0.00 35.33 3.41
140 141 2.695585 GGGAGGGTATCTTGGACAGAT 58.304 52.381 0.00 0.00 45.08 2.90
141 142 2.635427 GGGAGGGTATCTTGGACAGATC 59.365 54.545 0.00 0.00 41.80 2.75
142 143 2.635427 GGAGGGTATCTTGGACAGATCC 59.365 54.545 0.00 0.00 41.80 3.36
153 154 1.694696 GGACAGATCCATGACCCTACC 59.305 57.143 0.00 0.00 45.47 3.18
154 155 1.694696 GACAGATCCATGACCCTACCC 59.305 57.143 0.00 0.00 0.00 3.69
155 156 1.295292 ACAGATCCATGACCCTACCCT 59.705 52.381 0.00 0.00 0.00 4.34
156 157 2.522705 ACAGATCCATGACCCTACCCTA 59.477 50.000 0.00 0.00 0.00 3.53
157 158 3.169099 CAGATCCATGACCCTACCCTAG 58.831 54.545 0.00 0.00 0.00 3.02
158 159 2.112691 AGATCCATGACCCTACCCTAGG 59.887 54.545 0.06 0.06 45.81 3.02
159 160 1.326055 TCCATGACCCTACCCTAGGT 58.674 55.000 8.29 0.00 44.73 3.08
160 161 2.516887 TCCATGACCCTACCCTAGGTA 58.483 52.381 8.29 0.00 44.73 3.08
161 162 2.178544 TCCATGACCCTACCCTAGGTAC 59.821 54.545 8.29 0.00 44.73 3.34
162 163 2.090943 CCATGACCCTACCCTAGGTACA 60.091 54.545 8.29 0.00 44.73 2.90
163 164 3.439558 CCATGACCCTACCCTAGGTACAT 60.440 52.174 8.29 0.00 44.73 2.29
164 165 4.202749 CCATGACCCTACCCTAGGTACATA 60.203 50.000 8.29 0.00 44.73 2.29
165 166 4.736611 TGACCCTACCCTAGGTACATAG 57.263 50.000 8.29 7.59 44.73 2.23
166 167 3.181425 TGACCCTACCCTAGGTACATAGC 60.181 52.174 9.07 0.00 44.73 2.97
167 168 3.069774 ACCCTACCCTAGGTACATAGCT 58.930 50.000 9.07 0.00 44.73 3.32
168 169 3.470154 ACCCTACCCTAGGTACATAGCTT 59.530 47.826 9.07 0.75 44.73 3.74
169 170 4.087907 CCCTACCCTAGGTACATAGCTTC 58.912 52.174 9.07 0.00 44.73 3.86
170 171 4.448787 CCCTACCCTAGGTACATAGCTTCA 60.449 50.000 9.07 0.00 44.73 3.02
171 172 5.334421 CCTACCCTAGGTACATAGCTTCAT 58.666 45.833 9.07 0.00 41.18 2.57
172 173 5.780793 CCTACCCTAGGTACATAGCTTCATT 59.219 44.000 9.07 0.00 41.18 2.57
173 174 6.952358 CCTACCCTAGGTACATAGCTTCATTA 59.048 42.308 9.07 0.00 41.18 1.90
308 310 1.437986 GGGACCTCAGGAACGATCG 59.562 63.158 14.88 14.88 0.00 3.69
357 359 6.700520 AGCTCAATGTTATACCTAAAGTACGC 59.299 38.462 0.00 0.00 32.46 4.42
432 434 1.597742 ACCGCCATATTGCAGTCATC 58.402 50.000 0.00 0.00 0.00 2.92
436 438 2.481568 CGCCATATTGCAGTCATCGATT 59.518 45.455 0.00 0.00 0.00 3.34
486 488 3.380637 AGGACTTGAAGCATGCATTGATC 59.619 43.478 21.98 9.68 0.00 2.92
491 493 3.888583 TGAAGCATGCATTGATCCACTA 58.111 40.909 21.98 0.00 0.00 2.74
527 529 3.067180 CGCTTTTGGGATGAAGCATATGT 59.933 43.478 4.29 0.00 46.55 2.29
751 753 1.623311 TCCTGAATCTTCCACGCAAGA 59.377 47.619 0.00 0.00 43.62 3.02
804 806 2.829023 CCACCTAAGGGAGAAGTGGTA 58.171 52.381 0.00 0.00 42.47 3.25
865 867 1.615424 GGTGGAGCAGGAGGGGTTA 60.615 63.158 0.00 0.00 0.00 2.85
890 892 0.538584 TCGGTCGTGGCTCTACTAGA 59.461 55.000 0.00 0.00 0.00 2.43
1040 1044 2.097825 GCTGGTGATGCTCTGGAAAAT 58.902 47.619 0.00 0.00 0.00 1.82
1052 1056 2.896685 TCTGGAAAATCCGCCACAATTT 59.103 40.909 0.00 0.00 40.17 1.82
1147 1152 3.442273 ACATGTAAACCGATCGGCAAATT 59.558 39.130 33.62 23.36 39.32 1.82
1189 1194 5.806502 GCTAAACATGCTTGCACATTGAATA 59.193 36.000 0.00 0.00 0.00 1.75
1319 1324 2.214376 AAAAATGTCCCATCTCGCCA 57.786 45.000 0.00 0.00 0.00 5.69
1320 1325 2.442236 AAAATGTCCCATCTCGCCAT 57.558 45.000 0.00 0.00 0.00 4.40
1321 1326 1.683943 AAATGTCCCATCTCGCCATG 58.316 50.000 0.00 0.00 0.00 3.66
1322 1327 0.820891 AATGTCCCATCTCGCCATGC 60.821 55.000 0.00 0.00 0.00 4.06
1323 1328 1.986632 ATGTCCCATCTCGCCATGCA 61.987 55.000 0.00 0.00 0.00 3.96
1324 1329 1.890979 GTCCCATCTCGCCATGCAG 60.891 63.158 0.00 0.00 0.00 4.41
1325 1330 2.593725 CCCATCTCGCCATGCAGG 60.594 66.667 0.00 0.00 41.84 4.85
1326 1331 2.593725 CCATCTCGCCATGCAGGG 60.594 66.667 14.45 14.45 38.09 4.45
1334 1339 4.122149 CCATGCAGGGGCCCGTAA 62.122 66.667 18.59 9.22 40.13 3.18
1335 1340 2.828549 CATGCAGGGGCCCGTAAC 60.829 66.667 18.59 13.15 40.13 2.50
1336 1341 4.483243 ATGCAGGGGCCCGTAACG 62.483 66.667 18.59 6.27 40.13 3.18
1338 1343 3.773404 GCAGGGGCCCGTAACGTA 61.773 66.667 18.59 0.00 0.00 3.57
1339 1344 2.185093 CAGGGGCCCGTAACGTAC 59.815 66.667 18.59 0.00 0.00 3.67
1340 1345 2.283821 AGGGGCCCGTAACGTACA 60.284 61.111 17.40 0.00 0.00 2.90
1341 1346 2.185093 GGGGCCCGTAACGTACAG 59.815 66.667 17.79 0.00 0.00 2.74
1342 1347 2.649129 GGGGCCCGTAACGTACAGT 61.649 63.158 17.79 0.00 0.00 3.55
1343 1348 1.153765 GGGCCCGTAACGTACAGTC 60.154 63.158 5.69 0.00 0.00 3.51
1344 1349 1.153765 GGCCCGTAACGTACAGTCC 60.154 63.158 0.00 0.00 0.00 3.85
1345 1350 1.514873 GCCCGTAACGTACAGTCCG 60.515 63.158 0.00 0.00 0.00 4.79
1346 1351 1.137404 CCCGTAACGTACAGTCCGG 59.863 63.158 0.00 0.00 43.03 5.14
1347 1352 1.305219 CCCGTAACGTACAGTCCGGA 61.305 60.000 20.00 0.00 44.90 5.14
1348 1353 0.521291 CCGTAACGTACAGTCCGGAA 59.479 55.000 5.23 0.00 44.90 4.30
1349 1354 1.133025 CCGTAACGTACAGTCCGGAAT 59.867 52.381 5.23 0.00 44.90 3.01
1350 1355 2.444351 CGTAACGTACAGTCCGGAATC 58.556 52.381 5.23 0.00 0.00 2.52
1351 1356 2.159531 CGTAACGTACAGTCCGGAATCA 60.160 50.000 5.23 0.00 0.00 2.57
1352 1357 2.358939 AACGTACAGTCCGGAATCAC 57.641 50.000 5.23 4.18 0.00 3.06
1390 1395 2.027625 CCGTTCTTGTGGACTCCGC 61.028 63.158 1.21 1.21 34.12 5.54
1397 1402 2.433318 GTGGACTCCGCTGTCAGC 60.433 66.667 15.22 15.22 38.61 4.26
1402 1407 2.270205 CTCCGCTGTCAGCCCAAT 59.730 61.111 19.14 0.00 38.18 3.16
1418 1423 5.474876 CAGCCCAATCATATTTTAGTCCTCC 59.525 44.000 0.00 0.00 0.00 4.30
1444 1449 7.624360 TTTTATCTTTGTCACTGTCTGTGTT 57.376 32.000 9.41 0.00 46.27 3.32
1450 1455 3.197265 TGTCACTGTCTGTGTTGATGTG 58.803 45.455 9.41 0.00 46.27 3.21
1452 1457 3.001634 GTCACTGTCTGTGTTGATGTGTG 59.998 47.826 9.41 0.00 46.27 3.82
1462 1467 4.219507 TGTGTTGATGTGTGTTTTGGTTCT 59.780 37.500 0.00 0.00 0.00 3.01
1468 1473 5.758296 TGATGTGTGTTTTGGTTCTACTCTC 59.242 40.000 0.00 0.00 0.00 3.20
1480 1485 2.660572 TCTACTCTCCCTGATGTCAGC 58.339 52.381 4.48 0.00 42.47 4.26
1486 1491 1.222936 CCCTGATGTCAGCCTCCAC 59.777 63.158 4.48 0.00 42.47 4.02
1505 1510 1.607467 CCCCCACTTGCCTTTGGAG 60.607 63.158 0.00 0.00 34.46 3.86
1506 1511 1.607467 CCCCACTTGCCTTTGGAGG 60.607 63.158 0.00 0.00 46.50 4.30
1507 1512 1.607467 CCCACTTGCCTTTGGAGGG 60.607 63.158 0.00 0.00 43.75 4.30
1514 1519 3.369921 CCTTTGGAGGGCACAAGC 58.630 61.111 0.00 0.00 39.55 4.01
1521 1530 1.442526 GGAGGGCACAAGCATGATCG 61.443 60.000 0.00 0.00 44.61 3.69
1525 1534 1.089920 GGCACAAGCATGATCGTTCT 58.910 50.000 0.00 0.00 44.61 3.01
1544 1553 5.049886 CGTTCTTGTTAAACTAACCACCCTC 60.050 44.000 0.00 0.00 37.88 4.30
1552 1561 1.296056 CTAACCACCCTCGCCAAACG 61.296 60.000 0.00 0.00 45.62 3.60
1559 1568 0.808755 CCCTCGCCAAACGCTAAATT 59.191 50.000 0.00 0.00 43.23 1.82
1577 1586 4.419522 AATTGATGTTTAGTGGACGTGC 57.580 40.909 0.00 0.00 0.00 5.34
1585 1594 5.038683 TGTTTAGTGGACGTGCTATTATCG 58.961 41.667 8.99 0.00 0.00 2.92
1597 1606 3.068165 TGCTATTATCGTACAGTGCAGCT 59.932 43.478 0.00 0.00 0.00 4.24
1620 1629 3.055819 ACTGGTTCGTACAATGATGCTCT 60.056 43.478 0.00 0.00 0.00 4.09
1633 1654 6.127535 ACAATGATGCTCTCTTAACAATTGGG 60.128 38.462 10.83 0.00 0.00 4.12
1635 1656 4.701651 TGATGCTCTCTTAACAATTGGGTG 59.298 41.667 10.83 0.00 0.00 4.61
1637 1658 4.922206 TGCTCTCTTAACAATTGGGTGAT 58.078 39.130 10.83 0.00 0.00 3.06
1646 1667 3.475575 ACAATTGGGTGATTTTGTTGGC 58.524 40.909 10.83 0.00 0.00 4.52
1650 1671 1.137872 TGGGTGATTTTGTTGGCACAC 59.862 47.619 0.00 0.00 39.29 3.82
1690 1711 4.620184 ACGCAGTAGTATTGACGAGAAAAC 59.380 41.667 13.43 0.00 41.94 2.43
1694 1715 5.860182 CAGTAGTATTGACGAGAAAACGGAA 59.140 40.000 0.00 0.00 37.61 4.30
1728 1749 5.066505 CAGCAGTTAAGAATTAAGCCCGATT 59.933 40.000 0.00 0.00 41.97 3.34
1735 1756 8.860128 GTTAAGAATTAAGCCCGATTTCTTTTG 58.140 33.333 3.93 0.00 41.97 2.44
1746 1768 6.402658 GCCCGATTTCTTTTGTTTGTGAAAAA 60.403 34.615 0.00 0.00 33.09 1.94
1776 1798 3.007398 GCCCGATCTATCCTCAACAATCT 59.993 47.826 0.00 0.00 0.00 2.40
1783 1805 6.957920 TCTATCCTCAACAATCTCTCTCTG 57.042 41.667 0.00 0.00 0.00 3.35
1873 1898 4.073293 ACTCGGTCAAACTCTGTTGAAT 57.927 40.909 0.00 0.00 39.18 2.57
1915 1940 3.942115 TCAACATCAACCGACACTCAAAA 59.058 39.130 0.00 0.00 0.00 2.44
1919 1944 2.557317 TCAACCGACACTCAAAAGACC 58.443 47.619 0.00 0.00 0.00 3.85
1924 1949 1.137513 GACACTCAAAAGACCGACGG 58.862 55.000 13.61 13.61 0.00 4.79
1936 1961 1.817941 CCGACGGAAATCGCCCAAT 60.818 57.895 8.64 0.00 43.89 3.16
1937 1962 1.351707 CGACGGAAATCGCCCAATG 59.648 57.895 0.00 0.00 43.89 2.82
2000 2026 1.134521 GTGATCCAGACGGGCATGTTA 60.135 52.381 0.00 0.00 36.21 2.41
2004 2030 3.188159 TCCAGACGGGCATGTTATTAC 57.812 47.619 0.00 0.00 36.21 1.89
2005 2031 2.502130 TCCAGACGGGCATGTTATTACA 59.498 45.455 0.00 0.00 36.02 2.41
2006 2032 3.135712 TCCAGACGGGCATGTTATTACAT 59.864 43.478 0.00 0.00 39.59 2.29
2007 2033 4.345547 TCCAGACGGGCATGTTATTACATA 59.654 41.667 0.00 0.00 38.83 2.29
2008 2034 4.690748 CCAGACGGGCATGTTATTACATAG 59.309 45.833 0.00 0.00 43.07 2.23
2009 2035 5.297547 CAGACGGGCATGTTATTACATAGT 58.702 41.667 0.00 0.00 43.07 2.12
2010 2036 5.177511 CAGACGGGCATGTTATTACATAGTG 59.822 44.000 0.00 0.00 43.07 2.74
2011 2037 4.385825 ACGGGCATGTTATTACATAGTGG 58.614 43.478 0.00 0.00 43.07 4.00
2012 2038 3.751175 CGGGCATGTTATTACATAGTGGG 59.249 47.826 0.00 0.00 43.07 4.61
2013 2039 4.504165 CGGGCATGTTATTACATAGTGGGA 60.504 45.833 0.00 0.00 43.07 4.37
2014 2040 5.003804 GGGCATGTTATTACATAGTGGGAG 58.996 45.833 0.00 0.00 43.07 4.30
2015 2041 5.456186 GGGCATGTTATTACATAGTGGGAGT 60.456 44.000 0.00 0.00 43.07 3.85
2016 2042 6.239772 GGGCATGTTATTACATAGTGGGAGTA 60.240 42.308 0.00 0.00 43.07 2.59
2017 2043 7.221450 GGCATGTTATTACATAGTGGGAGTAA 58.779 38.462 0.00 0.00 43.07 2.24
2018 2044 7.172703 GGCATGTTATTACATAGTGGGAGTAAC 59.827 40.741 0.00 0.00 43.07 2.50
2019 2045 7.931948 GCATGTTATTACATAGTGGGAGTAACT 59.068 37.037 0.00 0.00 43.07 2.24
2020 2046 9.832445 CATGTTATTACATAGTGGGAGTAACTT 57.168 33.333 0.00 0.00 43.07 2.66
2023 2049 9.473640 GTTATTACATAGTGGGAGTAACTTAGC 57.526 37.037 0.00 0.00 31.30 3.09
2024 2050 7.916077 ATTACATAGTGGGAGTAACTTAGCT 57.084 36.000 0.00 0.00 31.30 3.32
2026 2052 6.963083 ACATAGTGGGAGTAACTTAGCTAG 57.037 41.667 0.00 0.00 0.00 3.42
2027 2053 6.433441 ACATAGTGGGAGTAACTTAGCTAGT 58.567 40.000 0.00 0.00 39.32 2.57
2028 2054 7.580910 ACATAGTGGGAGTAACTTAGCTAGTA 58.419 38.462 0.00 0.00 35.54 1.82
2029 2055 8.057623 ACATAGTGGGAGTAACTTAGCTAGTAA 58.942 37.037 0.00 0.00 35.54 2.24
2030 2056 6.772360 AGTGGGAGTAACTTAGCTAGTAAC 57.228 41.667 0.00 0.00 35.54 2.50
2031 2057 6.251471 AGTGGGAGTAACTTAGCTAGTAACA 58.749 40.000 0.00 0.00 35.54 2.41
2032 2058 6.896307 AGTGGGAGTAACTTAGCTAGTAACAT 59.104 38.462 0.00 0.00 35.54 2.71
2033 2059 8.057623 AGTGGGAGTAACTTAGCTAGTAACATA 58.942 37.037 0.00 0.00 35.54 2.29
2034 2060 8.351461 GTGGGAGTAACTTAGCTAGTAACATAG 58.649 40.741 0.00 0.00 35.54 2.23
2043 2069 2.974536 GCTAGTAACATAGCGCTCTTCG 59.025 50.000 16.34 3.03 38.90 3.79
2044 2070 3.303857 GCTAGTAACATAGCGCTCTTCGA 60.304 47.826 16.34 0.00 38.90 3.71
2045 2071 3.341857 AGTAACATAGCGCTCTTCGAG 57.658 47.619 16.34 0.64 41.67 4.04
2046 2072 2.943690 AGTAACATAGCGCTCTTCGAGA 59.056 45.455 16.34 0.00 41.67 4.04
2047 2073 2.941453 AACATAGCGCTCTTCGAGAA 57.059 45.000 16.34 0.00 41.67 2.87
2048 2074 2.941453 ACATAGCGCTCTTCGAGAAA 57.059 45.000 16.34 0.00 41.67 2.52
2049 2075 3.232213 ACATAGCGCTCTTCGAGAAAA 57.768 42.857 16.34 0.00 41.67 2.29
2050 2076 3.786635 ACATAGCGCTCTTCGAGAAAAT 58.213 40.909 16.34 0.00 41.67 1.82
2051 2077 4.184629 ACATAGCGCTCTTCGAGAAAATT 58.815 39.130 16.34 0.00 41.67 1.82
2052 2078 4.268884 ACATAGCGCTCTTCGAGAAAATTC 59.731 41.667 16.34 0.00 41.67 2.17
2053 2079 2.966050 AGCGCTCTTCGAGAAAATTCT 58.034 42.857 2.64 0.00 41.67 2.40
2054 2080 2.670414 AGCGCTCTTCGAGAAAATTCTG 59.330 45.455 2.64 0.00 41.67 3.02
2055 2081 2.786021 GCGCTCTTCGAGAAAATTCTGC 60.786 50.000 0.00 0.00 41.67 4.26
2056 2082 2.670414 CGCTCTTCGAGAAAATTCTGCT 59.330 45.455 0.00 0.00 41.67 4.24
2057 2083 3.124297 CGCTCTTCGAGAAAATTCTGCTT 59.876 43.478 0.00 0.00 41.67 3.91
2058 2084 4.327357 CGCTCTTCGAGAAAATTCTGCTTA 59.673 41.667 0.00 0.00 41.67 3.09
2059 2085 5.006165 CGCTCTTCGAGAAAATTCTGCTTAT 59.994 40.000 0.00 0.00 41.67 1.73
2060 2086 6.190962 GCTCTTCGAGAAAATTCTGCTTATG 58.809 40.000 0.00 0.00 37.73 1.90
2061 2087 6.183360 GCTCTTCGAGAAAATTCTGCTTATGT 60.183 38.462 0.00 0.00 37.73 2.29
2062 2088 7.065216 TCTTCGAGAAAATTCTGCTTATGTG 57.935 36.000 0.00 0.00 37.73 3.21
2063 2089 5.801350 TCGAGAAAATTCTGCTTATGTGG 57.199 39.130 0.00 0.00 37.73 4.17
2064 2090 4.094887 TCGAGAAAATTCTGCTTATGTGGC 59.905 41.667 0.00 0.00 37.73 5.01
2065 2091 4.142622 CGAGAAAATTCTGCTTATGTGGCA 60.143 41.667 0.00 0.00 37.73 4.92
2066 2092 5.619757 CGAGAAAATTCTGCTTATGTGGCAA 60.620 40.000 0.00 0.00 39.30 4.52
2067 2093 5.717119 AGAAAATTCTGCTTATGTGGCAAG 58.283 37.500 0.00 0.00 39.30 4.01
2068 2094 5.244626 AGAAAATTCTGCTTATGTGGCAAGT 59.755 36.000 0.00 0.00 39.30 3.16
2069 2095 6.434028 AGAAAATTCTGCTTATGTGGCAAGTA 59.566 34.615 0.00 0.00 39.30 2.24
2070 2096 6.588719 AAATTCTGCTTATGTGGCAAGTAA 57.411 33.333 0.00 0.00 39.30 2.24
2071 2097 6.780457 AATTCTGCTTATGTGGCAAGTAAT 57.220 33.333 0.00 0.00 39.30 1.89
2072 2098 6.780457 ATTCTGCTTATGTGGCAAGTAATT 57.220 33.333 0.00 0.00 39.30 1.40
2073 2099 7.880160 ATTCTGCTTATGTGGCAAGTAATTA 57.120 32.000 0.00 0.00 39.30 1.40
2074 2100 7.695480 TTCTGCTTATGTGGCAAGTAATTAA 57.305 32.000 0.00 0.00 39.30 1.40
2075 2101 7.880160 TCTGCTTATGTGGCAAGTAATTAAT 57.120 32.000 0.00 0.00 39.30 1.40
2076 2102 7.706159 TCTGCTTATGTGGCAAGTAATTAATG 58.294 34.615 0.00 0.00 39.30 1.90
2077 2103 7.555914 TCTGCTTATGTGGCAAGTAATTAATGA 59.444 33.333 0.00 0.00 39.30 2.57
2078 2104 7.706159 TGCTTATGTGGCAAGTAATTAATGAG 58.294 34.615 0.00 0.00 36.71 2.90
2079 2105 7.555914 TGCTTATGTGGCAAGTAATTAATGAGA 59.444 33.333 0.00 0.00 36.71 3.27
2080 2106 8.072567 GCTTATGTGGCAAGTAATTAATGAGAG 58.927 37.037 0.00 0.00 0.00 3.20
2081 2107 6.949352 ATGTGGCAAGTAATTAATGAGAGG 57.051 37.500 0.00 0.00 0.00 3.69
2082 2108 5.815581 TGTGGCAAGTAATTAATGAGAGGT 58.184 37.500 0.00 0.00 0.00 3.85
2083 2109 5.647658 TGTGGCAAGTAATTAATGAGAGGTG 59.352 40.000 0.00 0.00 0.00 4.00
2084 2110 5.066505 GTGGCAAGTAATTAATGAGAGGTGG 59.933 44.000 0.00 0.00 0.00 4.61
2085 2111 5.193679 GGCAAGTAATTAATGAGAGGTGGT 58.806 41.667 4.19 0.00 0.00 4.16
2086 2112 6.069905 TGGCAAGTAATTAATGAGAGGTGGTA 60.070 38.462 4.19 0.00 0.00 3.25
2087 2113 6.826741 GGCAAGTAATTAATGAGAGGTGGTAA 59.173 38.462 4.19 0.00 0.00 2.85
2088 2114 7.201705 GGCAAGTAATTAATGAGAGGTGGTAAC 60.202 40.741 4.19 0.00 0.00 2.50
2117 2143 5.773239 TGTTACTGTAACATAGCGCTTTC 57.227 39.130 25.14 0.00 43.23 2.62
2118 2144 4.628333 TGTTACTGTAACATAGCGCTTTCC 59.372 41.667 25.14 0.00 43.23 3.13
2119 2145 3.328382 ACTGTAACATAGCGCTTTCCA 57.672 42.857 18.68 0.00 0.00 3.53
2120 2146 3.670625 ACTGTAACATAGCGCTTTCCAA 58.329 40.909 18.68 0.00 0.00 3.53
2121 2147 3.684788 ACTGTAACATAGCGCTTTCCAAG 59.315 43.478 18.68 7.94 0.00 3.61
2122 2148 3.932710 CTGTAACATAGCGCTTTCCAAGA 59.067 43.478 18.68 0.00 0.00 3.02
2123 2149 3.682858 TGTAACATAGCGCTTTCCAAGAC 59.317 43.478 18.68 6.42 0.00 3.01
2124 2150 2.472695 ACATAGCGCTTTCCAAGACA 57.527 45.000 18.68 0.00 0.00 3.41
2125 2151 2.778299 ACATAGCGCTTTCCAAGACAA 58.222 42.857 18.68 0.00 0.00 3.18
2126 2152 2.744202 ACATAGCGCTTTCCAAGACAAG 59.256 45.455 18.68 0.00 0.00 3.16
2127 2153 2.831685 TAGCGCTTTCCAAGACAAGA 57.168 45.000 18.68 0.00 0.00 3.02
2128 2154 2.191128 AGCGCTTTCCAAGACAAGAT 57.809 45.000 2.64 0.00 0.00 2.40
2129 2155 1.808945 AGCGCTTTCCAAGACAAGATG 59.191 47.619 2.64 0.00 0.00 2.90
2130 2156 1.806542 GCGCTTTCCAAGACAAGATGA 59.193 47.619 0.00 0.00 0.00 2.92
2131 2157 2.159599 GCGCTTTCCAAGACAAGATGAG 60.160 50.000 0.00 0.00 0.00 2.90
2132 2158 3.070018 CGCTTTCCAAGACAAGATGAGT 58.930 45.455 0.00 0.00 0.00 3.41
2133 2159 3.124297 CGCTTTCCAAGACAAGATGAGTC 59.876 47.826 0.00 0.00 36.26 3.36
2135 2161 5.482908 GCTTTCCAAGACAAGATGAGTCTA 58.517 41.667 0.00 0.00 45.11 2.59
2136 2162 6.112058 GCTTTCCAAGACAAGATGAGTCTAT 58.888 40.000 0.00 0.00 45.11 1.98
2137 2163 6.036953 GCTTTCCAAGACAAGATGAGTCTATG 59.963 42.308 0.00 0.00 45.11 2.23
2138 2164 6.857437 TTCCAAGACAAGATGAGTCTATGA 57.143 37.500 0.00 0.00 45.11 2.15
2139 2165 6.462552 TCCAAGACAAGATGAGTCTATGAG 57.537 41.667 0.00 0.00 45.11 2.90
2140 2166 5.049167 CCAAGACAAGATGAGTCTATGAGC 58.951 45.833 0.00 0.00 45.11 4.26
2141 2167 5.163426 CCAAGACAAGATGAGTCTATGAGCT 60.163 44.000 0.00 0.00 45.11 4.09
2142 2168 6.040278 CCAAGACAAGATGAGTCTATGAGCTA 59.960 42.308 0.00 0.00 45.11 3.32
2143 2169 6.882610 AGACAAGATGAGTCTATGAGCTAG 57.117 41.667 0.00 0.00 44.10 3.42
2144 2170 6.364701 AGACAAGATGAGTCTATGAGCTAGT 58.635 40.000 0.00 0.00 44.10 2.57
2145 2171 7.513856 AGACAAGATGAGTCTATGAGCTAGTA 58.486 38.462 0.00 0.00 44.10 1.82
2146 2172 7.996066 AGACAAGATGAGTCTATGAGCTAGTAA 59.004 37.037 0.00 0.00 44.10 2.24
2147 2173 8.526667 ACAAGATGAGTCTATGAGCTAGTAAA 57.473 34.615 0.00 0.00 33.30 2.01
2148 2174 9.142014 ACAAGATGAGTCTATGAGCTAGTAAAT 57.858 33.333 0.00 0.00 33.30 1.40
2149 2175 9.409312 CAAGATGAGTCTATGAGCTAGTAAATG 57.591 37.037 0.00 0.00 33.30 2.32
2150 2176 8.932434 AGATGAGTCTATGAGCTAGTAAATGA 57.068 34.615 0.00 0.00 31.36 2.57
2151 2177 9.360901 AGATGAGTCTATGAGCTAGTAAATGAA 57.639 33.333 0.00 0.00 31.36 2.57
2152 2178 9.624697 GATGAGTCTATGAGCTAGTAAATGAAG 57.375 37.037 0.00 0.00 0.00 3.02
2153 2179 7.429633 TGAGTCTATGAGCTAGTAAATGAAGC 58.570 38.462 0.00 0.00 36.48 3.86
2154 2180 6.754193 AGTCTATGAGCTAGTAAATGAAGCC 58.246 40.000 0.00 0.00 36.92 4.35
2155 2181 6.325028 AGTCTATGAGCTAGTAAATGAAGCCA 59.675 38.462 0.00 0.00 36.92 4.75
2156 2182 7.016072 AGTCTATGAGCTAGTAAATGAAGCCAT 59.984 37.037 0.00 0.00 36.92 4.40
2157 2183 7.330700 GTCTATGAGCTAGTAAATGAAGCCATC 59.669 40.741 0.00 0.00 36.92 3.51
2158 2184 5.620738 TGAGCTAGTAAATGAAGCCATCT 57.379 39.130 0.00 0.00 36.92 2.90
2159 2185 6.731292 TGAGCTAGTAAATGAAGCCATCTA 57.269 37.500 0.00 0.00 36.92 1.98
2160 2186 7.308450 TGAGCTAGTAAATGAAGCCATCTAT 57.692 36.000 0.00 0.00 36.92 1.98
2161 2187 7.157347 TGAGCTAGTAAATGAAGCCATCTATG 58.843 38.462 0.00 0.00 36.92 2.23
2162 2188 7.015584 TGAGCTAGTAAATGAAGCCATCTATGA 59.984 37.037 0.00 0.00 36.92 2.15
2163 2189 7.915930 AGCTAGTAAATGAAGCCATCTATGAT 58.084 34.615 0.00 0.00 36.92 2.45
2164 2190 9.040259 AGCTAGTAAATGAAGCCATCTATGATA 57.960 33.333 0.00 0.00 36.92 2.15
2165 2191 9.092876 GCTAGTAAATGAAGCCATCTATGATAC 57.907 37.037 0.00 0.00 31.40 2.24
2202 2228 9.953565 TTACTTTGCATTATGAAGGTAGTAACT 57.046 29.630 0.00 0.00 0.00 2.24
2203 2229 8.863872 ACTTTGCATTATGAAGGTAGTAACTT 57.136 30.769 0.00 0.00 0.00 2.66
2204 2230 9.953565 ACTTTGCATTATGAAGGTAGTAACTTA 57.046 29.630 0.00 0.00 0.00 2.24
2207 2233 9.595823 TTGCATTATGAAGGTAGTAACTTAGAC 57.404 33.333 0.00 0.00 0.00 2.59
2208 2234 8.978472 TGCATTATGAAGGTAGTAACTTAGACT 58.022 33.333 0.00 0.00 0.00 3.24
2214 2240 8.558973 TGAAGGTAGTAACTTAGACTAGTGTC 57.441 38.462 0.00 0.00 43.22 3.67
2215 2241 8.159447 TGAAGGTAGTAACTTAGACTAGTGTCA 58.841 37.037 0.00 0.00 45.20 3.58
2216 2242 9.176460 GAAGGTAGTAACTTAGACTAGTGTCAT 57.824 37.037 0.00 0.00 45.20 3.06
2220 2246 9.881529 GTAGTAACTTAGACTAGTGTCATATGC 57.118 37.037 0.00 0.00 45.20 3.14
2221 2247 8.521170 AGTAACTTAGACTAGTGTCATATGCA 57.479 34.615 0.00 0.00 45.20 3.96
2222 2248 9.137459 AGTAACTTAGACTAGTGTCATATGCAT 57.863 33.333 3.79 3.79 45.20 3.96
2223 2249 9.186323 GTAACTTAGACTAGTGTCATATGCATG 57.814 37.037 10.16 0.00 45.20 4.06
2224 2250 7.588497 ACTTAGACTAGTGTCATATGCATGA 57.412 36.000 10.16 0.00 45.20 3.07
2237 2263 7.588497 TCATATGCATGACACTAGTCTAAGT 57.412 36.000 10.16 0.00 45.20 2.24
2238 2264 8.011844 TCATATGCATGACACTAGTCTAAGTT 57.988 34.615 10.16 0.00 45.20 2.66
2239 2265 9.131791 TCATATGCATGACACTAGTCTAAGTTA 57.868 33.333 10.16 0.00 45.20 2.24
2240 2266 9.186323 CATATGCATGACACTAGTCTAAGTTAC 57.814 37.037 10.16 0.00 45.20 2.50
2241 2267 6.835819 TGCATGACACTAGTCTAAGTTACT 57.164 37.500 0.00 0.00 45.20 2.24
2242 2268 6.853720 TGCATGACACTAGTCTAAGTTACTC 58.146 40.000 0.00 0.00 45.20 2.59
2243 2269 6.127703 TGCATGACACTAGTCTAAGTTACTCC 60.128 42.308 0.00 0.00 45.20 3.85
2244 2270 6.680872 GCATGACACTAGTCTAAGTTACTCCC 60.681 46.154 0.00 0.00 45.20 4.30
2245 2271 5.259632 TGACACTAGTCTAAGTTACTCCCC 58.740 45.833 0.00 0.00 45.20 4.81
2246 2272 5.222192 TGACACTAGTCTAAGTTACTCCCCA 60.222 44.000 0.00 0.00 45.20 4.96
2247 2273 5.015515 ACACTAGTCTAAGTTACTCCCCAC 58.984 45.833 0.00 0.00 0.00 4.61
2248 2274 5.222296 ACACTAGTCTAAGTTACTCCCCACT 60.222 44.000 0.00 0.00 0.00 4.00
2249 2275 6.012157 ACACTAGTCTAAGTTACTCCCCACTA 60.012 42.308 0.00 0.00 0.00 2.74
2250 2276 7.061688 CACTAGTCTAAGTTACTCCCCACTAT 58.938 42.308 0.00 0.00 0.00 2.12
2251 2277 7.013464 CACTAGTCTAAGTTACTCCCCACTATG 59.987 44.444 0.00 0.00 0.00 2.23
2252 2278 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
2253 2279 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
2254 2280 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
2255 2281 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
2256 2282 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
2257 2283 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
2258 2284 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
2259 2285 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
2260 2286 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
2261 2287 1.009060 TCCCCACTATGACCAGCCTTA 59.991 52.381 0.00 0.00 0.00 2.69
2262 2288 2.057922 CCCCACTATGACCAGCCTTAT 58.942 52.381 0.00 0.00 0.00 1.73
2263 2289 2.224621 CCCCACTATGACCAGCCTTATG 60.225 54.545 0.00 0.00 0.00 1.90
2264 2290 2.705658 CCCACTATGACCAGCCTTATGA 59.294 50.000 0.00 0.00 0.00 2.15
2265 2291 3.244353 CCCACTATGACCAGCCTTATGAG 60.244 52.174 0.00 0.00 0.00 2.90
2266 2292 3.244353 CCACTATGACCAGCCTTATGAGG 60.244 52.174 0.00 0.00 46.50 3.86
2267 2293 3.389329 CACTATGACCAGCCTTATGAGGT 59.611 47.826 5.29 0.00 45.44 3.85
2268 2294 4.040755 ACTATGACCAGCCTTATGAGGTT 58.959 43.478 5.29 0.00 45.44 3.50
2269 2295 3.567478 ATGACCAGCCTTATGAGGTTC 57.433 47.619 5.29 0.00 45.44 3.62
2270 2296 2.551270 TGACCAGCCTTATGAGGTTCT 58.449 47.619 5.29 0.00 45.44 3.01
2271 2297 2.501723 TGACCAGCCTTATGAGGTTCTC 59.498 50.000 5.29 0.00 45.44 2.87
2272 2298 1.840635 ACCAGCCTTATGAGGTTCTCC 59.159 52.381 5.29 0.00 45.44 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.586319 ATGCAAACAACCACTCGACG 59.414 50.000 0.00 0.00 0.00 5.12
1 2 2.806244 ACTATGCAAACAACCACTCGAC 59.194 45.455 0.00 0.00 0.00 4.20
2 3 3.064207 GACTATGCAAACAACCACTCGA 58.936 45.455 0.00 0.00 0.00 4.04
3 4 2.159841 CGACTATGCAAACAACCACTCG 60.160 50.000 0.00 0.00 0.00 4.18
4 5 3.064207 TCGACTATGCAAACAACCACTC 58.936 45.455 0.00 0.00 0.00 3.51
5 6 3.067106 CTCGACTATGCAAACAACCACT 58.933 45.455 0.00 0.00 0.00 4.00
6 7 2.806244 ACTCGACTATGCAAACAACCAC 59.194 45.455 0.00 0.00 0.00 4.16
7 8 2.805671 CACTCGACTATGCAAACAACCA 59.194 45.455 0.00 0.00 0.00 3.67
8 9 2.806244 ACACTCGACTATGCAAACAACC 59.194 45.455 0.00 0.00 0.00 3.77
9 10 3.741344 AGACACTCGACTATGCAAACAAC 59.259 43.478 0.00 0.00 0.00 3.32
10 11 3.990092 AGACACTCGACTATGCAAACAA 58.010 40.909 0.00 0.00 0.00 2.83
11 12 3.660501 AGACACTCGACTATGCAAACA 57.339 42.857 0.00 0.00 0.00 2.83
12 13 4.238514 AGAAGACACTCGACTATGCAAAC 58.761 43.478 0.00 0.00 0.00 2.93
13 14 4.521130 AGAAGACACTCGACTATGCAAA 57.479 40.909 0.00 0.00 0.00 3.68
14 15 5.836821 ATAGAAGACACTCGACTATGCAA 57.163 39.130 0.00 0.00 0.00 4.08
15 16 7.013369 ACAATATAGAAGACACTCGACTATGCA 59.987 37.037 0.00 0.00 0.00 3.96
16 17 7.364200 ACAATATAGAAGACACTCGACTATGC 58.636 38.462 0.00 0.00 0.00 3.14
17 18 7.742525 CGACAATATAGAAGACACTCGACTATG 59.257 40.741 0.00 0.00 0.00 2.23
18 19 7.656542 TCGACAATATAGAAGACACTCGACTAT 59.343 37.037 0.00 0.00 0.00 2.12
19 20 6.982724 TCGACAATATAGAAGACACTCGACTA 59.017 38.462 0.00 0.00 0.00 2.59
20 21 5.816258 TCGACAATATAGAAGACACTCGACT 59.184 40.000 0.00 0.00 0.00 4.18
21 22 6.045698 TCGACAATATAGAAGACACTCGAC 57.954 41.667 0.00 0.00 0.00 4.20
22 23 5.816258 ACTCGACAATATAGAAGACACTCGA 59.184 40.000 0.00 0.00 0.00 4.04
23 24 5.904630 CACTCGACAATATAGAAGACACTCG 59.095 44.000 0.00 0.00 0.00 4.18
24 25 6.038382 TCCACTCGACAATATAGAAGACACTC 59.962 42.308 0.00 0.00 0.00 3.51
25 26 5.886474 TCCACTCGACAATATAGAAGACACT 59.114 40.000 0.00 0.00 0.00 3.55
26 27 6.132791 TCCACTCGACAATATAGAAGACAC 57.867 41.667 0.00 0.00 0.00 3.67
27 28 6.152154 TGTTCCACTCGACAATATAGAAGACA 59.848 38.462 0.00 0.00 0.00 3.41
28 29 6.561614 TGTTCCACTCGACAATATAGAAGAC 58.438 40.000 0.00 0.00 0.00 3.01
29 30 6.769134 TGTTCCACTCGACAATATAGAAGA 57.231 37.500 0.00 0.00 0.00 2.87
30 31 7.327275 GCTATGTTCCACTCGACAATATAGAAG 59.673 40.741 0.00 0.00 0.00 2.85
31 32 7.014326 AGCTATGTTCCACTCGACAATATAGAA 59.986 37.037 0.00 0.00 0.00 2.10
32 33 6.490381 AGCTATGTTCCACTCGACAATATAGA 59.510 38.462 0.00 0.00 0.00 1.98
33 34 6.682746 AGCTATGTTCCACTCGACAATATAG 58.317 40.000 0.00 0.00 0.00 1.31
34 35 6.650427 AGCTATGTTCCACTCGACAATATA 57.350 37.500 0.00 0.00 0.00 0.86
35 36 5.537300 AGCTATGTTCCACTCGACAATAT 57.463 39.130 0.00 0.00 0.00 1.28
36 37 5.105513 TGAAGCTATGTTCCACTCGACAATA 60.106 40.000 0.00 0.00 0.00 1.90
37 38 3.895232 AGCTATGTTCCACTCGACAAT 57.105 42.857 0.00 0.00 0.00 2.71
38 39 3.006430 TGAAGCTATGTTCCACTCGACAA 59.994 43.478 0.00 0.00 0.00 3.18
39 40 2.560981 TGAAGCTATGTTCCACTCGACA 59.439 45.455 0.00 0.00 0.00 4.35
40 41 2.924290 GTGAAGCTATGTTCCACTCGAC 59.076 50.000 0.00 0.00 0.00 4.20
41 42 2.415491 CGTGAAGCTATGTTCCACTCGA 60.415 50.000 0.00 0.00 0.00 4.04
42 43 1.920574 CGTGAAGCTATGTTCCACTCG 59.079 52.381 0.00 0.00 0.00 4.18
43 44 2.271800 CCGTGAAGCTATGTTCCACTC 58.728 52.381 0.00 0.00 0.00 3.51
44 45 1.623811 ACCGTGAAGCTATGTTCCACT 59.376 47.619 0.00 0.00 0.00 4.00
45 46 2.000447 GACCGTGAAGCTATGTTCCAC 59.000 52.381 0.00 0.00 0.00 4.02
46 47 1.403647 CGACCGTGAAGCTATGTTCCA 60.404 52.381 0.00 0.00 0.00 3.53
47 48 1.135199 TCGACCGTGAAGCTATGTTCC 60.135 52.381 0.00 0.00 0.00 3.62
48 49 2.186076 CTCGACCGTGAAGCTATGTTC 58.814 52.381 0.00 0.00 0.00 3.18
49 50 1.544691 ACTCGACCGTGAAGCTATGTT 59.455 47.619 0.00 0.00 0.00 2.71
50 51 1.135373 CACTCGACCGTGAAGCTATGT 60.135 52.381 0.00 0.00 37.06 2.29
51 52 1.550065 CACTCGACCGTGAAGCTATG 58.450 55.000 0.00 0.00 37.06 2.23
52 53 0.456221 CCACTCGACCGTGAAGCTAT 59.544 55.000 6.39 0.00 37.06 2.97
53 54 0.607217 TCCACTCGACCGTGAAGCTA 60.607 55.000 6.39 0.00 37.06 3.32
54 55 1.251527 ATCCACTCGACCGTGAAGCT 61.252 55.000 6.39 0.00 37.06 3.74
55 56 1.078759 CATCCACTCGACCGTGAAGC 61.079 60.000 6.39 0.00 37.06 3.86
56 57 0.526211 TCATCCACTCGACCGTGAAG 59.474 55.000 6.39 0.00 37.06 3.02
57 58 1.135112 CATCATCCACTCGACCGTGAA 60.135 52.381 6.39 0.00 37.06 3.18
58 59 0.455815 CATCATCCACTCGACCGTGA 59.544 55.000 6.39 0.00 37.06 4.35
59 60 0.455815 TCATCATCCACTCGACCGTG 59.544 55.000 0.00 0.00 34.71 4.94
60 61 1.403814 ATCATCATCCACTCGACCGT 58.596 50.000 0.00 0.00 0.00 4.83
61 62 2.515926 AATCATCATCCACTCGACCG 57.484 50.000 0.00 0.00 0.00 4.79
62 63 3.242870 GCAAAATCATCATCCACTCGACC 60.243 47.826 0.00 0.00 0.00 4.79
63 64 3.624861 AGCAAAATCATCATCCACTCGAC 59.375 43.478 0.00 0.00 0.00 4.20
64 65 3.877559 AGCAAAATCATCATCCACTCGA 58.122 40.909 0.00 0.00 0.00 4.04
65 66 4.595116 GAAGCAAAATCATCATCCACTCG 58.405 43.478 0.00 0.00 0.00 4.18
66 67 4.333649 TCGAAGCAAAATCATCATCCACTC 59.666 41.667 0.00 0.00 0.00 3.51
67 68 4.095483 GTCGAAGCAAAATCATCATCCACT 59.905 41.667 0.00 0.00 0.00 4.00
68 69 4.346129 GTCGAAGCAAAATCATCATCCAC 58.654 43.478 0.00 0.00 0.00 4.02
69 70 3.378112 GGTCGAAGCAAAATCATCATCCA 59.622 43.478 0.00 0.00 0.00 3.41
70 71 3.546815 CGGTCGAAGCAAAATCATCATCC 60.547 47.826 0.00 0.00 0.00 3.51
71 72 3.611517 CGGTCGAAGCAAAATCATCATC 58.388 45.455 0.00 0.00 0.00 2.92
72 73 2.223340 GCGGTCGAAGCAAAATCATCAT 60.223 45.455 9.00 0.00 34.19 2.45
73 74 1.130373 GCGGTCGAAGCAAAATCATCA 59.870 47.619 9.00 0.00 34.19 3.07
74 75 1.398390 AGCGGTCGAAGCAAAATCATC 59.602 47.619 15.22 0.00 37.01 2.92
75 76 1.453155 AGCGGTCGAAGCAAAATCAT 58.547 45.000 15.22 0.00 37.01 2.45
76 77 1.196808 GAAGCGGTCGAAGCAAAATCA 59.803 47.619 15.22 0.00 37.01 2.57
77 78 1.464997 AGAAGCGGTCGAAGCAAAATC 59.535 47.619 15.22 8.37 37.01 2.17
78 79 1.197721 CAGAAGCGGTCGAAGCAAAAT 59.802 47.619 15.22 0.47 37.01 1.82
79 80 0.586319 CAGAAGCGGTCGAAGCAAAA 59.414 50.000 15.22 0.00 37.01 2.44
80 81 1.227999 CCAGAAGCGGTCGAAGCAAA 61.228 55.000 15.22 0.00 37.01 3.68
81 82 1.667830 CCAGAAGCGGTCGAAGCAA 60.668 57.895 15.22 0.00 37.01 3.91
82 83 2.048222 CCAGAAGCGGTCGAAGCA 60.048 61.111 15.22 0.00 37.01 3.91
83 84 1.627550 GAACCAGAAGCGGTCGAAGC 61.628 60.000 6.06 6.06 38.76 3.86
84 85 1.014564 GGAACCAGAAGCGGTCGAAG 61.015 60.000 0.00 0.00 38.76 3.79
85 86 1.005394 GGAACCAGAAGCGGTCGAA 60.005 57.895 0.00 0.00 38.76 3.71
86 87 1.469335 AAGGAACCAGAAGCGGTCGA 61.469 55.000 0.00 0.00 38.76 4.20
87 88 0.602905 AAAGGAACCAGAAGCGGTCG 60.603 55.000 0.00 0.00 38.76 4.79
88 89 2.028385 TCTAAAGGAACCAGAAGCGGTC 60.028 50.000 0.00 0.00 38.76 4.79
89 90 1.975680 TCTAAAGGAACCAGAAGCGGT 59.024 47.619 0.00 0.00 42.71 5.68
90 91 2.233922 TCTCTAAAGGAACCAGAAGCGG 59.766 50.000 0.00 0.00 0.00 5.52
91 92 3.594603 TCTCTAAAGGAACCAGAAGCG 57.405 47.619 0.00 0.00 0.00 4.68
92 93 4.837972 ACATCTCTAAAGGAACCAGAAGC 58.162 43.478 0.00 0.00 0.00 3.86
93 94 5.188751 AGGACATCTCTAAAGGAACCAGAAG 59.811 44.000 0.00 0.00 0.00 2.85
94 95 5.094387 AGGACATCTCTAAAGGAACCAGAA 58.906 41.667 0.00 0.00 0.00 3.02
95 96 4.689062 AGGACATCTCTAAAGGAACCAGA 58.311 43.478 0.00 0.00 0.00 3.86
96 97 5.181748 CAAGGACATCTCTAAAGGAACCAG 58.818 45.833 0.00 0.00 0.00 4.00
97 98 4.019321 CCAAGGACATCTCTAAAGGAACCA 60.019 45.833 0.00 0.00 0.00 3.67
98 99 4.518249 CCAAGGACATCTCTAAAGGAACC 58.482 47.826 0.00 0.00 0.00 3.62
99 100 4.518249 CCCAAGGACATCTCTAAAGGAAC 58.482 47.826 0.00 0.00 0.00 3.62
100 101 3.523564 CCCCAAGGACATCTCTAAAGGAA 59.476 47.826 0.00 0.00 33.47 3.36
101 102 3.115390 CCCCAAGGACATCTCTAAAGGA 58.885 50.000 0.00 0.00 33.47 3.36
102 103 3.115390 TCCCCAAGGACATCTCTAAAGG 58.885 50.000 0.00 0.00 37.19 3.11
103 104 4.414337 CTCCCCAAGGACATCTCTAAAG 57.586 50.000 0.00 0.00 37.19 1.85
115 116 0.846693 CCAAGATACCCTCCCCAAGG 59.153 60.000 0.00 0.00 45.77 3.61
116 117 1.490910 GTCCAAGATACCCTCCCCAAG 59.509 57.143 0.00 0.00 0.00 3.61
117 118 1.203505 TGTCCAAGATACCCTCCCCAA 60.204 52.381 0.00 0.00 0.00 4.12
118 119 0.419865 TGTCCAAGATACCCTCCCCA 59.580 55.000 0.00 0.00 0.00 4.96
119 120 1.132500 CTGTCCAAGATACCCTCCCC 58.868 60.000 0.00 0.00 0.00 4.81
120 121 2.176247 TCTGTCCAAGATACCCTCCC 57.824 55.000 0.00 0.00 0.00 4.30
121 122 2.635427 GGATCTGTCCAAGATACCCTCC 59.365 54.545 0.00 0.00 46.12 4.30
133 134 1.694696 GGTAGGGTCATGGATCTGTCC 59.305 57.143 0.00 0.00 45.31 4.02
134 135 1.694696 GGGTAGGGTCATGGATCTGTC 59.305 57.143 0.00 0.00 0.00 3.51
135 136 1.295292 AGGGTAGGGTCATGGATCTGT 59.705 52.381 0.00 0.00 0.00 3.41
136 137 2.109229 AGGGTAGGGTCATGGATCTG 57.891 55.000 0.00 0.00 0.00 2.90
137 138 2.112691 CCTAGGGTAGGGTCATGGATCT 59.887 54.545 0.00 0.00 42.42 2.75
138 139 2.541466 CCTAGGGTAGGGTCATGGATC 58.459 57.143 0.00 0.00 42.42 3.36
139 140 2.723530 CCTAGGGTAGGGTCATGGAT 57.276 55.000 0.00 0.00 42.42 3.41
149 150 6.919775 AATGAAGCTATGTACCTAGGGTAG 57.080 41.667 14.81 10.48 39.02 3.18
150 151 7.450634 CACTAATGAAGCTATGTACCTAGGGTA 59.549 40.741 14.81 0.12 37.09 3.69
151 152 6.267928 CACTAATGAAGCTATGTACCTAGGGT 59.732 42.308 14.81 1.17 40.16 4.34
152 153 6.493802 TCACTAATGAAGCTATGTACCTAGGG 59.506 42.308 14.81 0.00 0.00 3.53
153 154 7.309499 CCTCACTAATGAAGCTATGTACCTAGG 60.309 44.444 7.41 7.41 33.30 3.02
154 155 7.448777 TCCTCACTAATGAAGCTATGTACCTAG 59.551 40.741 1.10 1.10 33.30 3.02
155 156 7.230913 GTCCTCACTAATGAAGCTATGTACCTA 59.769 40.741 0.00 0.00 33.30 3.08
156 157 6.041069 GTCCTCACTAATGAAGCTATGTACCT 59.959 42.308 0.00 0.00 33.30 3.08
157 158 6.041069 AGTCCTCACTAATGAAGCTATGTACC 59.959 42.308 0.00 0.00 33.30 3.34
158 159 7.045126 AGTCCTCACTAATGAAGCTATGTAC 57.955 40.000 0.00 0.00 33.30 2.90
159 160 6.265649 GGAGTCCTCACTAATGAAGCTATGTA 59.734 42.308 0.41 0.00 33.30 2.29
160 161 5.069781 GGAGTCCTCACTAATGAAGCTATGT 59.930 44.000 0.41 0.00 33.30 2.29
161 162 5.304101 AGGAGTCCTCACTAATGAAGCTATG 59.696 44.000 5.62 0.00 33.30 2.23
162 163 5.463154 AGGAGTCCTCACTAATGAAGCTAT 58.537 41.667 5.62 0.00 33.30 2.97
163 164 4.873010 AGGAGTCCTCACTAATGAAGCTA 58.127 43.478 5.62 0.00 33.30 3.32
164 165 3.718723 AGGAGTCCTCACTAATGAAGCT 58.281 45.455 5.62 0.00 33.30 3.74
165 166 4.479786 AAGGAGTCCTCACTAATGAAGC 57.520 45.455 13.43 0.00 33.30 3.86
166 167 4.633565 GCAAAGGAGTCCTCACTAATGAAG 59.366 45.833 13.43 0.00 33.30 3.02
167 168 4.287067 AGCAAAGGAGTCCTCACTAATGAA 59.713 41.667 13.43 0.00 33.30 2.57
168 169 3.840666 AGCAAAGGAGTCCTCACTAATGA 59.159 43.478 13.43 0.00 30.89 2.57
169 170 4.213564 AGCAAAGGAGTCCTCACTAATG 57.786 45.455 13.43 6.44 30.89 1.90
170 171 4.566488 CCAAGCAAAGGAGTCCTCACTAAT 60.566 45.833 13.43 0.00 30.89 1.73
171 172 3.244561 CCAAGCAAAGGAGTCCTCACTAA 60.245 47.826 13.43 0.00 30.89 2.24
172 173 2.303022 CCAAGCAAAGGAGTCCTCACTA 59.697 50.000 13.43 0.00 30.89 2.74
173 174 1.072965 CCAAGCAAAGGAGTCCTCACT 59.927 52.381 13.43 7.45 30.89 3.41
308 310 3.191371 CCATAAAGCCTTCCACAACTGTC 59.809 47.826 0.00 0.00 0.00 3.51
486 488 3.620428 CGAGCATGCGCGTAGTGG 61.620 66.667 31.88 6.51 45.49 4.00
527 529 4.980805 GCCGCAGACCGAACCACA 62.981 66.667 0.00 0.00 40.02 4.17
890 892 0.036875 GTAAGGCTTGCACCAGGAGT 59.963 55.000 10.69 0.00 0.00 3.85
1013 1017 2.046892 GCATCACCAGCTCCACGT 60.047 61.111 0.00 0.00 0.00 4.49
1040 1044 0.535328 TGAACGGAAATTGTGGCGGA 60.535 50.000 0.00 0.00 0.00 5.54
1052 1056 2.112297 GGGCCACAACTGAACGGA 59.888 61.111 4.39 0.00 0.00 4.69
1120 1125 3.064820 GCCGATCGGTTTACATGTTGAAT 59.935 43.478 33.33 0.00 37.65 2.57
1137 1142 0.458370 GCGCAGGAAAATTTGCCGAT 60.458 50.000 9.70 0.00 37.00 4.18
1147 1152 1.300971 GCACAGAGATGCGCAGGAAA 61.301 55.000 18.32 0.00 35.50 3.13
1189 1194 2.037772 CCTCTAGCCAGCAATCCGTTAT 59.962 50.000 0.00 0.00 0.00 1.89
1250 1255 6.409524 TTCAAACAAAAGCATTCCTCAGAT 57.590 33.333 0.00 0.00 0.00 2.90
1310 1315 2.593725 CCCCTGCATGGCGAGATG 60.594 66.667 1.83 0.00 0.00 2.90
1311 1316 4.575973 GCCCCTGCATGGCGAGAT 62.576 66.667 11.22 0.00 39.48 2.75
1317 1322 4.122149 TTACGGGCCCCTGCATGG 62.122 66.667 18.66 1.86 40.13 3.66
1318 1323 2.828549 GTTACGGGCCCCTGCATG 60.829 66.667 18.66 2.75 40.13 4.06
1319 1324 4.483243 CGTTACGGGCCCCTGCAT 62.483 66.667 18.66 0.00 40.13 3.96
1321 1326 3.773404 TACGTTACGGGCCCCTGC 61.773 66.667 18.66 2.93 0.00 4.85
1322 1327 2.185093 GTACGTTACGGGCCCCTG 59.815 66.667 18.66 5.47 0.00 4.45
1323 1328 2.283821 TGTACGTTACGGGCCCCT 60.284 61.111 18.66 7.52 0.00 4.79
1324 1329 2.185093 CTGTACGTTACGGGCCCC 59.815 66.667 18.66 0.00 0.00 5.80
1325 1330 1.153765 GACTGTACGTTACGGGCCC 60.154 63.158 13.57 13.57 37.09 5.80
1326 1331 4.483711 GACTGTACGTTACGGGCC 57.516 61.111 10.20 0.00 37.09 5.80
1327 1332 1.514873 CGGACTGTACGTTACGGGC 60.515 63.158 10.20 1.65 42.55 6.13
1328 1333 1.137404 CCGGACTGTACGTTACGGG 59.863 63.158 12.02 0.00 40.54 5.28
1329 1334 0.521291 TTCCGGACTGTACGTTACGG 59.479 55.000 12.02 10.34 43.50 4.02
1330 1335 2.159531 TGATTCCGGACTGTACGTTACG 60.160 50.000 12.02 2.19 0.00 3.18
1331 1336 3.174375 GTGATTCCGGACTGTACGTTAC 58.826 50.000 12.02 0.00 0.00 2.50
1332 1337 2.159531 CGTGATTCCGGACTGTACGTTA 60.160 50.000 12.02 0.00 0.00 3.18
1333 1338 1.401931 CGTGATTCCGGACTGTACGTT 60.402 52.381 12.02 0.00 0.00 3.99
1334 1339 0.169672 CGTGATTCCGGACTGTACGT 59.830 55.000 12.02 0.00 0.00 3.57
1335 1340 2.939782 CGTGATTCCGGACTGTACG 58.060 57.895 1.83 9.55 0.00 3.67
1344 1349 2.180159 AACAGGACCCCGTGATTCCG 62.180 60.000 0.00 0.00 34.31 4.30
1345 1350 0.392595 GAACAGGACCCCGTGATTCC 60.393 60.000 0.00 0.00 32.83 3.01
1346 1351 0.323629 TGAACAGGACCCCGTGATTC 59.676 55.000 0.00 0.00 32.83 2.52
1347 1352 0.768622 TTGAACAGGACCCCGTGATT 59.231 50.000 0.00 0.00 32.83 2.57
1348 1353 0.324943 CTTGAACAGGACCCCGTGAT 59.675 55.000 0.00 0.00 32.83 3.06
1349 1354 1.052124 ACTTGAACAGGACCCCGTGA 61.052 55.000 0.00 0.00 32.83 4.35
1350 1355 0.179029 AACTTGAACAGGACCCCGTG 60.179 55.000 0.00 0.00 0.00 4.94
1351 1356 0.549469 AAACTTGAACAGGACCCCGT 59.451 50.000 0.00 0.00 0.00 5.28
1352 1357 1.607148 GAAAACTTGAACAGGACCCCG 59.393 52.381 0.00 0.00 0.00 5.73
1358 1363 4.142469 ACAAGAACGGAAAACTTGAACAGG 60.142 41.667 12.04 0.00 42.12 4.00
1390 1395 6.016777 GGACTAAAATATGATTGGGCTGACAG 60.017 42.308 0.00 0.00 0.00 3.51
1397 1402 8.539117 AAAAGGAGGACTAAAATATGATTGGG 57.461 34.615 0.00 0.00 0.00 4.12
1444 1449 5.680619 AGAGTAGAACCAAAACACACATCA 58.319 37.500 0.00 0.00 0.00 3.07
1450 1455 4.065789 CAGGGAGAGTAGAACCAAAACAC 58.934 47.826 0.00 0.00 0.00 3.32
1452 1457 4.618920 TCAGGGAGAGTAGAACCAAAAC 57.381 45.455 0.00 0.00 0.00 2.43
1462 1467 1.289231 AGGCTGACATCAGGGAGAGTA 59.711 52.381 10.81 0.00 43.94 2.59
1468 1473 1.222936 GTGGAGGCTGACATCAGGG 59.777 63.158 10.81 0.00 43.94 4.45
1497 1502 0.901580 ATGCTTGTGCCCTCCAAAGG 60.902 55.000 0.00 0.00 42.95 3.11
1498 1503 0.245539 CATGCTTGTGCCCTCCAAAG 59.754 55.000 0.00 0.00 38.71 2.77
1500 1505 0.040058 ATCATGCTTGTGCCCTCCAA 59.960 50.000 0.00 0.00 38.71 3.53
1505 1510 0.099436 GAACGATCATGCTTGTGCCC 59.901 55.000 0.00 0.00 38.71 5.36
1506 1511 1.089920 AGAACGATCATGCTTGTGCC 58.910 50.000 0.00 0.00 38.71 5.01
1507 1512 2.095567 ACAAGAACGATCATGCTTGTGC 60.096 45.455 14.31 0.58 46.41 4.57
1510 1515 6.373779 AGTTTAACAAGAACGATCATGCTTG 58.626 36.000 7.99 7.99 42.46 4.01
1514 1519 7.744715 GTGGTTAGTTTAACAAGAACGATCATG 59.255 37.037 0.00 0.00 40.39 3.07
1521 1530 5.049886 CGAGGGTGGTTAGTTTAACAAGAAC 60.050 44.000 0.00 0.00 40.39 3.01
1525 1534 3.140623 GCGAGGGTGGTTAGTTTAACAA 58.859 45.455 0.00 0.00 40.39 2.83
1552 1561 6.021596 CACGTCCACTAAACATCAATTTAGC 58.978 40.000 5.41 0.00 43.24 3.09
1559 1568 2.831685 AGCACGTCCACTAAACATCA 57.168 45.000 0.00 0.00 0.00 3.07
1573 1582 3.368495 TGCACTGTACGATAATAGCACG 58.632 45.455 0.00 0.00 0.00 5.34
1577 1586 5.853810 CAGTAGCTGCACTGTACGATAATAG 59.146 44.000 18.08 0.00 40.89 1.73
1585 1594 2.338500 GAACCAGTAGCTGCACTGTAC 58.662 52.381 21.88 9.22 43.68 2.90
1597 1606 4.159693 AGAGCATCATTGTACGAACCAGTA 59.840 41.667 0.00 0.00 37.82 2.74
1603 1612 6.394809 TGTTAAGAGAGCATCATTGTACGAA 58.605 36.000 0.00 0.00 37.82 3.85
1604 1613 5.961272 TGTTAAGAGAGCATCATTGTACGA 58.039 37.500 0.00 0.00 37.82 3.43
1620 1629 6.989169 CCAACAAAATCACCCAATTGTTAAGA 59.011 34.615 4.43 0.00 42.36 2.10
1633 1654 0.852136 GCGTGTGCCAACAAAATCAC 59.148 50.000 0.00 0.00 38.27 3.06
1635 1656 1.782044 ATGCGTGTGCCAACAAAATC 58.218 45.000 0.00 0.00 41.78 2.17
1637 1658 1.678627 ACTATGCGTGTGCCAACAAAA 59.321 42.857 0.00 0.00 41.78 2.44
1646 1667 2.063266 ACGTAAACCACTATGCGTGTG 58.937 47.619 0.00 0.00 42.20 3.82
1650 1671 1.253545 GCGTACGTAAACCACTATGCG 59.746 52.381 17.90 0.00 0.00 4.73
1659 1680 5.053674 CGTCAATACTACTGCGTACGTAAAC 60.054 44.000 17.90 0.00 0.00 2.01
1661 1682 4.328712 TCGTCAATACTACTGCGTACGTAA 59.671 41.667 17.90 4.85 0.00 3.18
1680 1701 4.844522 GCTACAAAATTCCGTTTTCTCGTC 59.155 41.667 0.00 0.00 37.93 4.20
1684 1705 4.558697 GCTGGCTACAAAATTCCGTTTTCT 60.559 41.667 0.00 0.00 37.93 2.52
1690 1711 1.812571 ACTGCTGGCTACAAAATTCCG 59.187 47.619 0.00 0.00 0.00 4.30
1694 1715 6.840780 ATTCTTAACTGCTGGCTACAAAAT 57.159 33.333 0.00 0.00 0.00 1.82
1735 1756 5.980715 TCGGGCTTAATTCTTTTTCACAAAC 59.019 36.000 0.00 0.00 0.00 2.93
1746 1768 5.087323 TGAGGATAGATCGGGCTTAATTCT 58.913 41.667 0.00 0.00 0.00 2.40
1812 1834 6.872920 AGCTTGACCAAGTTAAAAATGACAA 58.127 32.000 10.96 0.00 40.45 3.18
1849 1871 5.209818 TCAACAGAGTTTGACCGAGTATT 57.790 39.130 0.00 0.00 30.29 1.89
1890 1915 3.067106 GAGTGTCGGTTGATGTTGATGT 58.933 45.455 0.00 0.00 0.00 3.06
1895 1920 4.035208 GTCTTTTGAGTGTCGGTTGATGTT 59.965 41.667 0.00 0.00 0.00 2.71
1904 1929 0.776451 CGTCGGTCTTTTGAGTGTCG 59.224 55.000 0.00 0.00 0.00 4.35
1915 1940 2.183555 GGCGATTTCCGTCGGTCT 59.816 61.111 11.88 0.00 41.72 3.85
1919 1944 1.351707 CATTGGGCGATTTCCGTCG 59.648 57.895 0.00 0.00 45.31 5.12
1924 1949 2.024414 AGCTAACCATTGGGCGATTTC 58.976 47.619 7.78 0.00 37.90 2.17
1936 1961 2.291996 TGACCAGTAGCCTAGCTAACCA 60.292 50.000 0.00 0.00 43.07 3.67
1937 1962 2.362717 CTGACCAGTAGCCTAGCTAACC 59.637 54.545 0.00 0.00 43.07 2.85
2000 2026 7.916077 AGCTAAGTTACTCCCACTATGTAAT 57.084 36.000 0.00 0.00 0.00 1.89
2004 2030 6.963083 ACTAGCTAAGTTACTCCCACTATG 57.037 41.667 0.00 0.00 33.35 2.23
2005 2031 8.057623 TGTTACTAGCTAAGTTACTCCCACTAT 58.942 37.037 0.00 0.00 38.33 2.12
2006 2032 7.405292 TGTTACTAGCTAAGTTACTCCCACTA 58.595 38.462 0.00 0.00 38.33 2.74
2007 2033 6.251471 TGTTACTAGCTAAGTTACTCCCACT 58.749 40.000 0.00 0.00 38.33 4.00
2008 2034 6.521151 TGTTACTAGCTAAGTTACTCCCAC 57.479 41.667 0.00 0.00 38.33 4.61
2009 2035 7.014038 GCTATGTTACTAGCTAAGTTACTCCCA 59.986 40.741 0.00 0.00 40.79 4.37
2010 2036 7.369607 GCTATGTTACTAGCTAAGTTACTCCC 58.630 42.308 0.00 0.00 40.79 4.30
2011 2037 7.076983 CGCTATGTTACTAGCTAAGTTACTCC 58.923 42.308 0.00 0.00 41.61 3.85
2012 2038 6.578172 GCGCTATGTTACTAGCTAAGTTACTC 59.422 42.308 0.00 0.00 41.61 2.59
2013 2039 6.262720 AGCGCTATGTTACTAGCTAAGTTACT 59.737 38.462 8.99 0.00 41.61 2.24
2014 2040 6.437094 AGCGCTATGTTACTAGCTAAGTTAC 58.563 40.000 8.99 0.79 41.61 2.50
2015 2041 6.485984 AGAGCGCTATGTTACTAGCTAAGTTA 59.514 38.462 11.50 0.00 41.61 2.24
2016 2042 5.299782 AGAGCGCTATGTTACTAGCTAAGTT 59.700 40.000 11.50 0.00 41.61 2.66
2017 2043 4.822896 AGAGCGCTATGTTACTAGCTAAGT 59.177 41.667 11.50 0.00 41.61 2.24
2018 2044 5.365403 AGAGCGCTATGTTACTAGCTAAG 57.635 43.478 11.50 0.00 41.61 2.18
2019 2045 5.560375 CGAAGAGCGCTATGTTACTAGCTAA 60.560 44.000 11.50 0.00 41.61 3.09
2020 2046 4.083961 CGAAGAGCGCTATGTTACTAGCTA 60.084 45.833 11.50 0.00 41.61 3.32
2021 2047 3.304123 CGAAGAGCGCTATGTTACTAGCT 60.304 47.826 11.50 0.00 41.61 3.32
2022 2048 2.974536 CGAAGAGCGCTATGTTACTAGC 59.025 50.000 11.50 0.00 40.61 3.42
2023 2049 4.469625 TCGAAGAGCGCTATGTTACTAG 57.530 45.455 11.50 0.15 40.61 2.57
2038 2064 6.092670 CCACATAAGCAGAATTTTCTCGAAGA 59.907 38.462 0.00 0.00 34.74 2.87
2039 2065 6.253746 CCACATAAGCAGAATTTTCTCGAAG 58.746 40.000 0.00 0.00 34.74 3.79
2040 2066 5.391950 GCCACATAAGCAGAATTTTCTCGAA 60.392 40.000 0.00 0.00 34.74 3.71
2041 2067 4.094887 GCCACATAAGCAGAATTTTCTCGA 59.905 41.667 0.00 0.00 34.74 4.04
2042 2068 4.142622 TGCCACATAAGCAGAATTTTCTCG 60.143 41.667 0.00 0.00 34.74 4.04
2043 2069 5.314923 TGCCACATAAGCAGAATTTTCTC 57.685 39.130 0.00 0.00 34.74 2.87
2044 2070 5.244626 ACTTGCCACATAAGCAGAATTTTCT 59.755 36.000 0.00 0.00 42.17 2.52
2045 2071 5.473039 ACTTGCCACATAAGCAGAATTTTC 58.527 37.500 0.00 0.00 42.17 2.29
2046 2072 5.473066 ACTTGCCACATAAGCAGAATTTT 57.527 34.783 0.00 0.00 42.17 1.82
2047 2073 6.588719 TTACTTGCCACATAAGCAGAATTT 57.411 33.333 0.00 0.00 42.17 1.82
2048 2074 6.780457 ATTACTTGCCACATAAGCAGAATT 57.220 33.333 0.00 0.00 42.17 2.17
2049 2075 6.780457 AATTACTTGCCACATAAGCAGAAT 57.220 33.333 0.00 0.00 42.17 2.40
2050 2076 7.695480 TTAATTACTTGCCACATAAGCAGAA 57.305 32.000 0.00 0.00 42.17 3.02
2051 2077 7.555914 TCATTAATTACTTGCCACATAAGCAGA 59.444 33.333 0.00 0.00 42.17 4.26
2052 2078 7.706159 TCATTAATTACTTGCCACATAAGCAG 58.294 34.615 0.00 0.00 42.17 4.24
2053 2079 7.555914 TCTCATTAATTACTTGCCACATAAGCA 59.444 33.333 0.00 0.00 38.81 3.91
2054 2080 7.930217 TCTCATTAATTACTTGCCACATAAGC 58.070 34.615 0.00 0.00 0.00 3.09
2055 2081 8.562892 CCTCTCATTAATTACTTGCCACATAAG 58.437 37.037 0.00 0.00 0.00 1.73
2056 2082 8.052748 ACCTCTCATTAATTACTTGCCACATAA 58.947 33.333 0.00 0.00 0.00 1.90
2057 2083 7.498900 CACCTCTCATTAATTACTTGCCACATA 59.501 37.037 0.00 0.00 0.00 2.29
2058 2084 6.319658 CACCTCTCATTAATTACTTGCCACAT 59.680 38.462 0.00 0.00 0.00 3.21
2059 2085 5.647658 CACCTCTCATTAATTACTTGCCACA 59.352 40.000 0.00 0.00 0.00 4.17
2060 2086 5.066505 CCACCTCTCATTAATTACTTGCCAC 59.933 44.000 0.00 0.00 0.00 5.01
2061 2087 5.192927 CCACCTCTCATTAATTACTTGCCA 58.807 41.667 0.00 0.00 0.00 4.92
2062 2088 5.193679 ACCACCTCTCATTAATTACTTGCC 58.806 41.667 0.00 0.00 0.00 4.52
2063 2089 7.335924 TGTTACCACCTCTCATTAATTACTTGC 59.664 37.037 0.00 0.00 0.00 4.01
2064 2090 8.786826 TGTTACCACCTCTCATTAATTACTTG 57.213 34.615 0.00 0.00 0.00 3.16
2095 2121 8.947657 CTTGGAAAGCGCTATGTTACAGTAACA 61.948 40.741 25.09 25.09 44.55 2.41
2096 2122 4.628333 TGGAAAGCGCTATGTTACAGTAAC 59.372 41.667 12.05 15.58 39.11 2.50
2097 2123 4.823157 TGGAAAGCGCTATGTTACAGTAA 58.177 39.130 12.05 0.00 0.00 2.24
2098 2124 4.459390 TGGAAAGCGCTATGTTACAGTA 57.541 40.909 12.05 0.00 0.00 2.74
2099 2125 3.328382 TGGAAAGCGCTATGTTACAGT 57.672 42.857 12.05 0.00 0.00 3.55
2100 2126 3.932710 TCTTGGAAAGCGCTATGTTACAG 59.067 43.478 12.05 3.17 45.70 2.74
2101 2127 3.682858 GTCTTGGAAAGCGCTATGTTACA 59.317 43.478 12.05 5.56 45.70 2.41
2102 2128 3.682858 TGTCTTGGAAAGCGCTATGTTAC 59.317 43.478 12.05 2.15 45.70 2.50
2103 2129 3.932822 TGTCTTGGAAAGCGCTATGTTA 58.067 40.909 12.05 0.00 45.70 2.41
2104 2130 2.778299 TGTCTTGGAAAGCGCTATGTT 58.222 42.857 12.05 0.00 45.70 2.71
2105 2131 2.472695 TGTCTTGGAAAGCGCTATGT 57.527 45.000 12.05 0.00 45.70 2.29
2106 2132 3.002791 TCTTGTCTTGGAAAGCGCTATG 58.997 45.455 12.05 0.00 45.70 2.23
2107 2133 3.334583 TCTTGTCTTGGAAAGCGCTAT 57.665 42.857 12.05 0.00 45.70 2.97
2108 2134 2.831685 TCTTGTCTTGGAAAGCGCTA 57.168 45.000 12.05 0.00 45.70 4.26
2109 2135 1.808945 CATCTTGTCTTGGAAAGCGCT 59.191 47.619 2.64 2.64 45.70 5.92
2110 2136 1.806542 TCATCTTGTCTTGGAAAGCGC 59.193 47.619 0.00 0.00 45.70 5.92
2111 2137 3.070018 ACTCATCTTGTCTTGGAAAGCG 58.930 45.455 0.00 0.00 45.70 4.68
2112 2138 4.322567 AGACTCATCTTGTCTTGGAAAGC 58.677 43.478 0.00 0.00 45.70 3.51
2113 2139 7.326454 TCATAGACTCATCTTGTCTTGGAAAG 58.674 38.462 1.67 0.00 41.45 2.62
2114 2140 7.244886 TCATAGACTCATCTTGTCTTGGAAA 57.755 36.000 1.67 0.00 41.45 3.13
2115 2141 6.629068 GCTCATAGACTCATCTTGTCTTGGAA 60.629 42.308 1.67 0.00 41.45 3.53
2116 2142 5.163468 GCTCATAGACTCATCTTGTCTTGGA 60.163 44.000 1.67 0.74 41.45 3.53
2117 2143 5.049167 GCTCATAGACTCATCTTGTCTTGG 58.951 45.833 1.67 0.00 41.45 3.61
2118 2144 5.904941 AGCTCATAGACTCATCTTGTCTTG 58.095 41.667 1.67 2.00 41.45 3.02
2119 2145 6.833416 ACTAGCTCATAGACTCATCTTGTCTT 59.167 38.462 0.00 0.00 41.45 3.01
2120 2146 6.364701 ACTAGCTCATAGACTCATCTTGTCT 58.635 40.000 0.00 0.00 45.48 3.41
2121 2147 6.633500 ACTAGCTCATAGACTCATCTTGTC 57.367 41.667 0.00 0.00 36.29 3.18
2122 2148 8.526667 TTTACTAGCTCATAGACTCATCTTGT 57.473 34.615 0.00 0.00 36.29 3.16
2123 2149 9.409312 CATTTACTAGCTCATAGACTCATCTTG 57.591 37.037 0.00 0.00 36.29 3.02
2124 2150 9.360901 TCATTTACTAGCTCATAGACTCATCTT 57.639 33.333 0.00 0.00 36.29 2.40
2125 2151 8.932434 TCATTTACTAGCTCATAGACTCATCT 57.068 34.615 0.00 0.00 39.15 2.90
2126 2152 9.624697 CTTCATTTACTAGCTCATAGACTCATC 57.375 37.037 0.00 0.00 35.30 2.92
2127 2153 8.087750 GCTTCATTTACTAGCTCATAGACTCAT 58.912 37.037 0.00 0.00 35.30 2.90
2128 2154 7.429633 GCTTCATTTACTAGCTCATAGACTCA 58.570 38.462 0.00 0.00 35.30 3.41
2129 2155 6.866248 GGCTTCATTTACTAGCTCATAGACTC 59.134 42.308 0.00 0.00 35.30 3.36
2130 2156 6.325028 TGGCTTCATTTACTAGCTCATAGACT 59.675 38.462 0.00 0.00 35.30 3.24
2131 2157 6.516718 TGGCTTCATTTACTAGCTCATAGAC 58.483 40.000 0.00 0.00 35.30 2.59
2132 2158 6.731292 TGGCTTCATTTACTAGCTCATAGA 57.269 37.500 0.00 0.00 35.30 1.98
2133 2159 7.385267 AGATGGCTTCATTTACTAGCTCATAG 58.615 38.462 0.00 0.00 37.53 2.23
2134 2160 7.308450 AGATGGCTTCATTTACTAGCTCATA 57.692 36.000 0.00 0.00 35.30 2.15
2135 2161 6.185114 AGATGGCTTCATTTACTAGCTCAT 57.815 37.500 0.00 0.00 35.30 2.90
2136 2162 5.620738 AGATGGCTTCATTTACTAGCTCA 57.379 39.130 0.00 0.00 35.30 4.26
2137 2163 7.382110 TCATAGATGGCTTCATTTACTAGCTC 58.618 38.462 0.00 0.00 35.30 4.09
2138 2164 7.308450 TCATAGATGGCTTCATTTACTAGCT 57.692 36.000 3.03 0.00 35.30 3.32
2139 2165 9.092876 GTATCATAGATGGCTTCATTTACTAGC 57.907 37.037 3.03 0.00 0.00 3.42
2176 2202 9.953565 AGTTACTACCTTCATAATGCAAAGTAA 57.046 29.630 0.00 0.00 0.00 2.24
2177 2203 9.953565 AAGTTACTACCTTCATAATGCAAAGTA 57.046 29.630 0.00 0.00 0.00 2.24
2178 2204 8.863872 AAGTTACTACCTTCATAATGCAAAGT 57.136 30.769 0.00 0.00 0.00 2.66
2181 2207 9.595823 GTCTAAGTTACTACCTTCATAATGCAA 57.404 33.333 0.00 0.00 0.00 4.08
2182 2208 8.978472 AGTCTAAGTTACTACCTTCATAATGCA 58.022 33.333 0.00 0.00 0.00 3.96
2188 2214 9.176460 GACACTAGTCTAAGTTACTACCTTCAT 57.824 37.037 0.00 0.00 41.64 2.57
2189 2215 8.159447 TGACACTAGTCTAAGTTACTACCTTCA 58.841 37.037 0.00 0.00 45.20 3.02
2190 2216 8.558973 TGACACTAGTCTAAGTTACTACCTTC 57.441 38.462 0.00 0.00 45.20 3.46
2194 2220 9.881529 GCATATGACACTAGTCTAAGTTACTAC 57.118 37.037 6.97 0.00 45.20 2.73
2195 2221 9.623000 TGCATATGACACTAGTCTAAGTTACTA 57.377 33.333 6.97 0.00 45.20 1.82
2196 2222 8.521170 TGCATATGACACTAGTCTAAGTTACT 57.479 34.615 6.97 0.00 45.20 2.24
2197 2223 9.186323 CATGCATATGACACTAGTCTAAGTTAC 57.814 37.037 6.97 0.00 45.20 2.50
2198 2224 9.131791 TCATGCATATGACACTAGTCTAAGTTA 57.868 33.333 6.97 0.00 45.20 2.24
2199 2225 8.011844 TCATGCATATGACACTAGTCTAAGTT 57.988 34.615 6.97 0.00 45.20 2.66
2200 2226 7.588497 TCATGCATATGACACTAGTCTAAGT 57.412 36.000 6.97 0.00 45.20 2.24
2213 2239 7.588497 ACTTAGACTAGTGTCATGCATATGA 57.412 36.000 6.97 0.00 45.20 2.15
2214 2240 9.186323 GTAACTTAGACTAGTGTCATGCATATG 57.814 37.037 0.00 0.00 45.20 1.78
2215 2241 9.137459 AGTAACTTAGACTAGTGTCATGCATAT 57.863 33.333 0.00 0.00 45.20 1.78
2216 2242 8.521170 AGTAACTTAGACTAGTGTCATGCATA 57.479 34.615 0.00 0.00 45.20 3.14
2217 2243 7.411486 AGTAACTTAGACTAGTGTCATGCAT 57.589 36.000 0.00 0.00 45.20 3.96
2218 2244 6.127703 GGAGTAACTTAGACTAGTGTCATGCA 60.128 42.308 0.00 0.00 45.20 3.96
2219 2245 6.267070 GGAGTAACTTAGACTAGTGTCATGC 58.733 44.000 0.00 0.00 45.20 4.06
2220 2246 6.183360 GGGGAGTAACTTAGACTAGTGTCATG 60.183 46.154 0.00 0.00 45.20 3.07
2221 2247 5.892686 GGGGAGTAACTTAGACTAGTGTCAT 59.107 44.000 0.00 0.00 45.20 3.06
2222 2248 5.222192 TGGGGAGTAACTTAGACTAGTGTCA 60.222 44.000 0.00 0.00 45.20 3.58
2223 2249 5.125257 GTGGGGAGTAACTTAGACTAGTGTC 59.875 48.000 0.00 0.00 43.22 3.67
2224 2250 5.015515 GTGGGGAGTAACTTAGACTAGTGT 58.984 45.833 0.00 0.00 0.00 3.55
2225 2251 5.262804 AGTGGGGAGTAACTTAGACTAGTG 58.737 45.833 0.00 0.00 0.00 2.74
2226 2252 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
2227 2253 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
2228 2254 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
2229 2255 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
2230 2256 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
2231 2257 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
2232 2258 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
2233 2259 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
2234 2260 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
2235 2261 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
2236 2262 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
2237 2263 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
2238 2264 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
2239 2265 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
2240 2266 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
2241 2267 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
2242 2268 1.507140 TAAGGCTGGTCATAGTGGGG 58.493 55.000 0.00 0.00 0.00 4.96
2243 2269 2.705658 TCATAAGGCTGGTCATAGTGGG 59.294 50.000 0.00 0.00 0.00 4.61
2244 2270 3.244353 CCTCATAAGGCTGGTCATAGTGG 60.244 52.174 0.00 0.00 35.37 4.00
2245 2271 4.000331 CCTCATAAGGCTGGTCATAGTG 58.000 50.000 0.00 0.00 35.37 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.