Multiple sequence alignment - TraesCS7A01G468000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G468000 chr7A 100.000 3885 0 0 1 3885 664095669 664099553 0.000000e+00 7175.0
1 TraesCS7A01G468000 chr7A 83.316 953 100 29 2580 3502 664111568 664112491 0.000000e+00 824.0
2 TraesCS7A01G468000 chr7A 85.172 553 65 14 1642 2181 664111030 664111578 5.670000e-153 551.0
3 TraesCS7A01G468000 chr7A 84.778 473 40 8 707 1179 664108678 664109118 2.750000e-121 446.0
4 TraesCS7A01G468000 chr7A 77.846 817 112 40 1332 2107 664005143 664005931 3.560000e-120 442.0
5 TraesCS7A01G468000 chr7A 86.607 336 39 4 1621 1950 664120793 664121128 2.210000e-97 366.0
6 TraesCS7A01G468000 chr7A 77.207 487 69 27 2749 3209 664006109 664006579 3.000000e-61 246.0
7 TraesCS7A01G468000 chr7A 83.643 269 24 8 689 950 664117883 664118138 6.490000e-58 235.0
8 TraesCS7A01G468000 chr7A 88.462 78 6 3 107 184 195093191 195093265 1.490000e-14 91.6
9 TraesCS7A01G468000 chr7B 85.009 1681 121 51 417 2047 634058665 634060264 0.000000e+00 1587.0
10 TraesCS7A01G468000 chr7B 91.383 998 76 8 2587 3578 634060567 634061560 0.000000e+00 1358.0
11 TraesCS7A01G468000 chr7B 91.354 960 55 18 2638 3588 633845208 633846148 0.000000e+00 1288.0
12 TraesCS7A01G468000 chr7B 83.534 1081 117 24 199 1247 633841459 633842510 0.000000e+00 953.0
13 TraesCS7A01G468000 chr7B 87.302 819 79 14 2704 3502 633926220 633927033 0.000000e+00 913.0
14 TraesCS7A01G468000 chr7B 83.633 947 114 17 2580 3493 633897907 633898845 0.000000e+00 852.0
15 TraesCS7A01G468000 chr7B 83.465 883 112 20 2641 3502 634053780 634054649 0.000000e+00 791.0
16 TraesCS7A01G468000 chr7B 82.995 888 109 22 2641 3502 633785027 633785898 0.000000e+00 765.0
17 TraesCS7A01G468000 chr7B 86.643 554 61 9 1636 2181 633843882 633844430 5.550000e-168 601.0
18 TraesCS7A01G468000 chr7B 85.665 579 72 8 1611 2181 633897342 633897917 2.000000e-167 599.0
19 TraesCS7A01G468000 chr7B 87.121 528 49 14 760 1279 633929332 633929848 7.240000e-162 580.0
20 TraesCS7A01G468000 chr7B 78.947 836 95 36 424 1246 633924270 633925037 9.700000e-136 494.0
21 TraesCS7A01G468000 chr7B 80.556 576 81 14 1593 2137 633925564 633926139 7.770000e-112 414.0
22 TraesCS7A01G468000 chr7B 87.755 294 17 7 3607 3882 633846137 633846429 3.740000e-85 326.0
23 TraesCS7A01G468000 chr7B 91.573 178 15 0 1090 1267 633896643 633896820 3.000000e-61 246.0
24 TraesCS7A01G468000 chr7B 90.000 190 15 1 3700 3885 634062980 634063169 3.880000e-60 243.0
25 TraesCS7A01G468000 chr7B 90.647 139 12 1 2046 2183 634060428 634060566 2.380000e-42 183.0
26 TraesCS7A01G468000 chr7B 79.496 278 37 15 2900 3165 634291302 634291571 3.080000e-41 180.0
27 TraesCS7A01G468000 chr7B 92.647 68 4 1 2580 2647 633926157 633926223 3.200000e-16 97.1
28 TraesCS7A01G468000 chr7B 92.424 66 5 0 2580 2645 633844420 633844485 1.150000e-15 95.3
29 TraesCS7A01G468000 chr7B 100.000 37 0 0 993 1029 633783821 633783857 6.970000e-08 69.4
30 TraesCS7A01G468000 chr7B 100.000 28 0 0 993 1020 633896568 633896595 7.000000e-03 52.8
31 TraesCS7A01G468000 chrUn 87.552 723 75 8 2580 3290 92630006 92630725 0.000000e+00 822.0
32 TraesCS7A01G468000 chrUn 81.519 882 110 30 1332 2181 92629156 92630016 0.000000e+00 676.0
33 TraesCS7A01G468000 chrUn 86.635 419 36 12 2177 2580 294376827 294376414 2.750000e-121 446.0
34 TraesCS7A01G468000 chrUn 77.638 398 44 23 3031 3398 92641106 92641488 2.370000e-47 200.0
35 TraesCS7A01G468000 chr2D 85.266 414 39 11 2182 2580 579001946 579002352 1.300000e-109 407.0
36 TraesCS7A01G468000 chr2D 78.049 164 21 12 34 184 133479218 133479057 5.350000e-14 89.8
37 TraesCS7A01G468000 chr3D 85.606 396 37 13 2180 2561 454744144 454744533 7.820000e-107 398.0
38 TraesCS7A01G468000 chr6B 84.709 412 37 18 2182 2580 685183761 685184159 4.710000e-104 388.0
39 TraesCS7A01G468000 chr6B 80.707 368 41 20 2182 2529 11751784 11751427 3.850000e-65 259.0
40 TraesCS7A01G468000 chr4D 85.641 390 33 15 2181 2553 334160330 334160713 4.710000e-104 388.0
41 TraesCS7A01G468000 chr4D 90.476 63 4 2 127 188 222929342 222929281 8.950000e-12 82.4
42 TraesCS7A01G468000 chr1B 84.444 405 39 18 2181 2569 169937928 169938324 1.020000e-100 377.0
43 TraesCS7A01G468000 chr1B 100.000 31 0 0 2639 2669 168623210 168623180 1.510000e-04 58.4
44 TraesCS7A01G468000 chr2B 83.831 402 44 14 2182 2569 774392831 774393225 2.850000e-96 363.0
45 TraesCS7A01G468000 chr2B 83.252 412 41 18 2182 2572 70882700 70882296 1.720000e-93 353.0
46 TraesCS7A01G468000 chr4B 83.130 409 45 17 2182 2572 115547447 115547045 6.180000e-93 351.0
47 TraesCS7A01G468000 chr4A 94.764 191 7 1 1 188 83696416 83696226 1.060000e-75 294.0
48 TraesCS7A01G468000 chr5B 91.758 182 12 3 1 182 345848633 345848811 2.320000e-62 250.0
49 TraesCS7A01G468000 chr5B 82.222 90 12 4 101 188 478071655 478071568 1.500000e-09 75.0
50 TraesCS7A01G468000 chr7D 83.966 237 20 5 1040 1270 574231255 574231031 1.090000e-50 211.0
51 TraesCS7A01G468000 chr2A 88.060 67 6 2 128 193 636454626 636454561 1.160000e-10 78.7
52 TraesCS7A01G468000 chr2A 91.228 57 3 2 128 184 631599105 631599051 4.160000e-10 76.8
53 TraesCS7A01G468000 chr3A 82.716 81 9 5 105 184 157579625 157579549 2.510000e-07 67.6
54 TraesCS7A01G468000 chr6D 97.143 35 0 1 2635 2669 9346292 9346259 1.510000e-04 58.4
55 TraesCS7A01G468000 chr1D 100.000 31 0 0 2639 2669 110661081 110661051 1.510000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G468000 chr7A 664095669 664099553 3884 False 7175.00 7175 100.00000 1 3885 1 chr7A.!!$F2 3884
1 TraesCS7A01G468000 chr7A 664108678 664112491 3813 False 607.00 824 84.42200 707 3502 3 chr7A.!!$F4 2795
2 TraesCS7A01G468000 chr7A 664005143 664006579 1436 False 344.00 442 77.52650 1332 3209 2 chr7A.!!$F3 1877
3 TraesCS7A01G468000 chr7A 664117883 664121128 3245 False 300.50 366 85.12500 689 1950 2 chr7A.!!$F5 1261
4 TraesCS7A01G468000 chr7B 634058665 634063169 4504 False 842.75 1587 89.25975 417 3885 4 chr7B.!!$F7 3468
5 TraesCS7A01G468000 chr7B 634053780 634054649 869 False 791.00 791 83.46500 2641 3502 1 chr7B.!!$F1 861
6 TraesCS7A01G468000 chr7B 633841459 633846429 4970 False 652.66 1288 88.34200 199 3882 5 chr7B.!!$F4 3683
7 TraesCS7A01G468000 chr7B 633924270 633929848 5578 False 499.62 913 85.31460 424 3502 5 chr7B.!!$F6 3078
8 TraesCS7A01G468000 chr7B 633896568 633898845 2277 False 437.45 852 90.21775 993 3493 4 chr7B.!!$F5 2500
9 TraesCS7A01G468000 chr7B 633783821 633785898 2077 False 417.20 765 91.49750 993 3502 2 chr7B.!!$F3 2509
10 TraesCS7A01G468000 chrUn 92629156 92630725 1569 False 749.00 822 84.53550 1332 3290 2 chrUn.!!$F2 1958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.035739 GTTGCAAGGGACGGGAACTA 59.964 55.0 0.00 0.00 36.38 2.24 F
32 33 0.107654 GGAACTAGATGGCGCTGGTT 60.108 55.0 7.64 0.71 41.48 3.67 F
149 150 0.178984 TATAGGGCCGTCCGTGATCA 60.179 55.0 0.00 0.00 41.52 2.92 F
1735 6418 0.179234 TCAACCAGTGTTTCGAGCCA 59.821 50.0 0.00 0.00 30.42 4.75 F
2207 7096 0.544697 ACACTTCGGAACCTGGTTGT 59.455 50.0 18.42 5.18 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1417 4628 0.676184 TGGACTGCTGACTGACTGAC 59.324 55.000 0.0 0.00 0.00 3.51 R
1418 4629 0.964700 CTGGACTGCTGACTGACTGA 59.035 55.000 0.0 0.00 0.00 3.41 R
1865 6554 1.292223 CCGCCGTGAAGAAGAAGGA 59.708 57.895 0.0 0.00 0.00 3.36 R
2562 7451 0.107557 AAGGACACGGACGTTTGGTT 60.108 50.000 0.0 0.00 0.00 3.67 R
3608 11766 0.179100 CCACTGTCATGGCTAGTCGG 60.179 60.000 0.0 2.26 31.52 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.351450 GTTGCAAGGGACGGGAAC 58.649 61.111 0.00 0.00 33.08 3.62
18 19 1.228154 GTTGCAAGGGACGGGAACT 60.228 57.895 0.00 0.00 36.38 3.01
19 20 0.035739 GTTGCAAGGGACGGGAACTA 59.964 55.000 0.00 0.00 36.38 2.24
20 21 0.323629 TTGCAAGGGACGGGAACTAG 59.676 55.000 0.00 0.00 0.00 2.57
21 22 0.543410 TGCAAGGGACGGGAACTAGA 60.543 55.000 0.00 0.00 0.00 2.43
22 23 0.831307 GCAAGGGACGGGAACTAGAT 59.169 55.000 0.00 0.00 0.00 1.98
23 24 1.473434 GCAAGGGACGGGAACTAGATG 60.473 57.143 0.00 0.00 0.00 2.90
24 25 1.139058 CAAGGGACGGGAACTAGATGG 59.861 57.143 0.00 0.00 0.00 3.51
25 26 1.049289 AGGGACGGGAACTAGATGGC 61.049 60.000 0.00 0.00 0.00 4.40
26 27 1.067582 GGACGGGAACTAGATGGCG 59.932 63.158 0.00 0.00 0.00 5.69
27 28 1.591863 GACGGGAACTAGATGGCGC 60.592 63.158 0.00 0.00 0.00 6.53
28 29 2.017559 GACGGGAACTAGATGGCGCT 62.018 60.000 7.64 0.00 0.00 5.92
29 30 1.592669 CGGGAACTAGATGGCGCTG 60.593 63.158 7.64 0.00 0.00 5.18
30 31 1.227674 GGGAACTAGATGGCGCTGG 60.228 63.158 7.64 0.00 0.00 4.85
31 32 1.522569 GGAACTAGATGGCGCTGGT 59.477 57.895 7.64 0.00 0.00 4.00
32 33 0.107654 GGAACTAGATGGCGCTGGTT 60.108 55.000 7.64 0.71 41.48 3.67
33 34 1.291132 GAACTAGATGGCGCTGGTTC 58.709 55.000 16.37 16.37 45.01 3.62
34 35 0.460284 AACTAGATGGCGCTGGTTCG 60.460 55.000 7.64 0.00 35.01 3.95
35 36 1.592669 CTAGATGGCGCTGGTTCGG 60.593 63.158 7.64 0.00 0.00 4.30
36 37 2.978452 CTAGATGGCGCTGGTTCGGG 62.978 65.000 7.64 0.00 0.00 5.14
43 44 3.647771 GCTGGTTCGGGGGAGGTT 61.648 66.667 0.00 0.00 0.00 3.50
44 45 2.351276 CTGGTTCGGGGGAGGTTG 59.649 66.667 0.00 0.00 0.00 3.77
45 46 3.253838 TGGTTCGGGGGAGGTTGG 61.254 66.667 0.00 0.00 0.00 3.77
46 47 4.043100 GGTTCGGGGGAGGTTGGG 62.043 72.222 0.00 0.00 0.00 4.12
47 48 4.043100 GTTCGGGGGAGGTTGGGG 62.043 72.222 0.00 0.00 0.00 4.96
48 49 4.273262 TTCGGGGGAGGTTGGGGA 62.273 66.667 0.00 0.00 0.00 4.81
49 50 3.589627 TTCGGGGGAGGTTGGGGAT 62.590 63.158 0.00 0.00 0.00 3.85
50 51 3.489513 CGGGGGAGGTTGGGGATC 61.490 72.222 0.00 0.00 0.00 3.36
51 52 3.489513 GGGGGAGGTTGGGGATCG 61.490 72.222 0.00 0.00 0.00 3.69
52 53 3.489513 GGGGAGGTTGGGGATCGG 61.490 72.222 0.00 0.00 0.00 4.18
53 54 3.489513 GGGAGGTTGGGGATCGGG 61.490 72.222 0.00 0.00 0.00 5.14
54 55 3.489513 GGAGGTTGGGGATCGGGG 61.490 72.222 0.00 0.00 0.00 5.73
55 56 2.366435 GAGGTTGGGGATCGGGGA 60.366 66.667 0.00 0.00 0.00 4.81
56 57 2.366972 AGGTTGGGGATCGGGGAG 60.367 66.667 0.00 0.00 0.00 4.30
57 58 3.489513 GGTTGGGGATCGGGGAGG 61.490 72.222 0.00 0.00 0.00 4.30
58 59 3.489513 GTTGGGGATCGGGGAGGG 61.490 72.222 0.00 0.00 0.00 4.30
59 60 4.835456 TTGGGGATCGGGGAGGGG 62.835 72.222 0.00 0.00 0.00 4.79
70 71 4.791069 GGAGGGGGCGGTGGACTA 62.791 72.222 0.00 0.00 0.00 2.59
71 72 3.155167 GAGGGGGCGGTGGACTAG 61.155 72.222 0.00 0.00 0.00 2.57
72 73 3.978410 GAGGGGGCGGTGGACTAGT 62.978 68.421 0.00 0.00 0.00 2.57
73 74 3.782443 GGGGGCGGTGGACTAGTG 61.782 72.222 0.00 0.00 0.00 2.74
74 75 3.782443 GGGGCGGTGGACTAGTGG 61.782 72.222 0.00 0.00 0.00 4.00
75 76 3.782443 GGGCGGTGGACTAGTGGG 61.782 72.222 0.00 0.00 0.00 4.61
76 77 2.682494 GGCGGTGGACTAGTGGGA 60.682 66.667 0.00 0.00 0.00 4.37
77 78 2.722201 GGCGGTGGACTAGTGGGAG 61.722 68.421 0.00 0.00 0.00 4.30
78 79 1.982938 GCGGTGGACTAGTGGGAGT 60.983 63.158 0.00 0.00 0.00 3.85
79 80 1.890894 CGGTGGACTAGTGGGAGTG 59.109 63.158 0.00 0.00 0.00 3.51
80 81 1.605058 CGGTGGACTAGTGGGAGTGG 61.605 65.000 0.00 0.00 0.00 4.00
81 82 1.265454 GGTGGACTAGTGGGAGTGGG 61.265 65.000 0.00 0.00 0.00 4.61
82 83 1.612442 TGGACTAGTGGGAGTGGGC 60.612 63.158 0.00 0.00 0.00 5.36
83 84 2.722201 GGACTAGTGGGAGTGGGCG 61.722 68.421 0.00 0.00 0.00 6.13
84 85 1.982938 GACTAGTGGGAGTGGGCGT 60.983 63.158 0.00 0.00 0.00 5.68
85 86 2.227089 GACTAGTGGGAGTGGGCGTG 62.227 65.000 0.00 0.00 0.00 5.34
86 87 2.203728 TAGTGGGAGTGGGCGTGT 60.204 61.111 0.00 0.00 0.00 4.49
87 88 1.827399 CTAGTGGGAGTGGGCGTGTT 61.827 60.000 0.00 0.00 0.00 3.32
88 89 1.823169 TAGTGGGAGTGGGCGTGTTC 61.823 60.000 0.00 0.00 0.00 3.18
89 90 2.847234 TGGGAGTGGGCGTGTTCT 60.847 61.111 0.00 0.00 0.00 3.01
90 91 2.430367 GGGAGTGGGCGTGTTCTT 59.570 61.111 0.00 0.00 0.00 2.52
91 92 1.228154 GGGAGTGGGCGTGTTCTTT 60.228 57.895 0.00 0.00 0.00 2.52
92 93 1.235281 GGGAGTGGGCGTGTTCTTTC 61.235 60.000 0.00 0.00 0.00 2.62
93 94 0.250338 GGAGTGGGCGTGTTCTTTCT 60.250 55.000 0.00 0.00 0.00 2.52
94 95 1.594331 GAGTGGGCGTGTTCTTTCTT 58.406 50.000 0.00 0.00 0.00 2.52
95 96 1.947456 GAGTGGGCGTGTTCTTTCTTT 59.053 47.619 0.00 0.00 0.00 2.52
96 97 1.947456 AGTGGGCGTGTTCTTTCTTTC 59.053 47.619 0.00 0.00 0.00 2.62
97 98 1.947456 GTGGGCGTGTTCTTTCTTTCT 59.053 47.619 0.00 0.00 0.00 2.52
98 99 2.031944 GTGGGCGTGTTCTTTCTTTCTC 60.032 50.000 0.00 0.00 0.00 2.87
99 100 1.535896 GGGCGTGTTCTTTCTTTCTCC 59.464 52.381 0.00 0.00 0.00 3.71
100 101 2.495084 GGCGTGTTCTTTCTTTCTCCT 58.505 47.619 0.00 0.00 0.00 3.69
101 102 2.480802 GGCGTGTTCTTTCTTTCTCCTC 59.519 50.000 0.00 0.00 0.00 3.71
102 103 2.155924 GCGTGTTCTTTCTTTCTCCTCG 59.844 50.000 0.00 0.00 0.00 4.63
103 104 2.731976 CGTGTTCTTTCTTTCTCCTCGG 59.268 50.000 0.00 0.00 0.00 4.63
104 105 3.067833 GTGTTCTTTCTTTCTCCTCGGG 58.932 50.000 0.00 0.00 0.00 5.14
105 106 2.704065 TGTTCTTTCTTTCTCCTCGGGT 59.296 45.455 0.00 0.00 0.00 5.28
106 107 3.135895 TGTTCTTTCTTTCTCCTCGGGTT 59.864 43.478 0.00 0.00 0.00 4.11
107 108 3.679824 TCTTTCTTTCTCCTCGGGTTC 57.320 47.619 0.00 0.00 0.00 3.62
108 109 2.029290 TCTTTCTTTCTCCTCGGGTTCG 60.029 50.000 0.00 0.00 37.82 3.95
109 110 0.606604 TTCTTTCTCCTCGGGTTCGG 59.393 55.000 0.00 0.00 36.95 4.30
110 111 1.218316 CTTTCTCCTCGGGTTCGGG 59.782 63.158 0.00 0.00 36.95 5.14
111 112 1.228956 TTTCTCCTCGGGTTCGGGA 60.229 57.895 0.00 0.00 39.73 5.14
112 113 1.255667 TTTCTCCTCGGGTTCGGGAG 61.256 60.000 13.32 13.32 46.08 4.30
130 131 3.593794 GACCTCCGCGCGTCCTAT 61.594 66.667 29.95 9.94 0.00 2.57
131 132 2.203252 ACCTCCGCGCGTCCTATA 60.203 61.111 29.95 5.57 0.00 1.31
132 133 1.584380 GACCTCCGCGCGTCCTATAT 61.584 60.000 29.95 6.95 0.00 0.86
133 134 0.321919 ACCTCCGCGCGTCCTATATA 60.322 55.000 29.95 2.27 0.00 0.86
134 135 0.377554 CCTCCGCGCGTCCTATATAG 59.622 60.000 29.95 9.95 0.00 1.31
135 136 0.377554 CTCCGCGCGTCCTATATAGG 59.622 60.000 29.95 21.21 45.02 2.57
136 137 1.028330 TCCGCGCGTCCTATATAGGG 61.028 60.000 29.95 13.51 43.79 3.53
137 138 1.226603 CGCGCGTCCTATATAGGGC 60.227 63.158 25.54 23.62 44.60 5.19
138 139 1.141234 GCGCGTCCTATATAGGGCC 59.859 63.158 24.60 16.85 45.25 5.80
139 140 1.432251 CGCGTCCTATATAGGGCCG 59.568 63.158 24.60 25.00 45.25 6.13
140 141 1.310933 CGCGTCCTATATAGGGCCGT 61.311 60.000 24.60 2.24 45.25 5.68
141 142 0.455005 GCGTCCTATATAGGGCCGTC 59.545 60.000 24.60 18.17 45.25 4.79
142 143 1.101331 CGTCCTATATAGGGCCGTCC 58.899 60.000 24.60 8.12 45.25 4.79
143 144 1.101331 GTCCTATATAGGGCCGTCCG 58.899 60.000 25.54 1.06 42.26 4.79
144 145 0.700564 TCCTATATAGGGCCGTCCGT 59.299 55.000 25.54 0.00 43.79 4.69
145 146 0.815734 CCTATATAGGGCCGTCCGTG 59.184 60.000 19.74 0.00 39.86 4.94
146 147 1.615116 CCTATATAGGGCCGTCCGTGA 60.615 57.143 19.74 0.00 39.86 4.35
147 148 2.376109 CTATATAGGGCCGTCCGTGAT 58.624 52.381 0.00 0.00 41.52 3.06
148 149 1.183549 ATATAGGGCCGTCCGTGATC 58.816 55.000 0.00 0.00 41.52 2.92
149 150 0.178984 TATAGGGCCGTCCGTGATCA 60.179 55.000 0.00 0.00 41.52 2.92
150 151 1.464376 ATAGGGCCGTCCGTGATCAG 61.464 60.000 0.00 0.00 41.52 2.90
151 152 2.561467 TAGGGCCGTCCGTGATCAGA 62.561 60.000 0.00 0.00 41.52 3.27
152 153 2.577059 GGCCGTCCGTGATCAGAA 59.423 61.111 0.00 0.00 0.00 3.02
153 154 1.144057 GGCCGTCCGTGATCAGAAT 59.856 57.895 0.00 0.00 0.00 2.40
154 155 0.387929 GGCCGTCCGTGATCAGAATA 59.612 55.000 0.00 0.00 0.00 1.75
155 156 1.202486 GGCCGTCCGTGATCAGAATAA 60.202 52.381 0.00 0.00 0.00 1.40
156 157 1.859080 GCCGTCCGTGATCAGAATAAC 59.141 52.381 0.00 0.00 0.00 1.89
157 158 2.481449 GCCGTCCGTGATCAGAATAACT 60.481 50.000 0.00 0.00 0.00 2.24
158 159 3.243301 GCCGTCCGTGATCAGAATAACTA 60.243 47.826 0.00 0.00 0.00 2.24
159 160 4.558898 GCCGTCCGTGATCAGAATAACTAT 60.559 45.833 0.00 0.00 0.00 2.12
160 161 5.529791 CCGTCCGTGATCAGAATAACTATT 58.470 41.667 0.00 0.00 0.00 1.73
161 162 5.629849 CCGTCCGTGATCAGAATAACTATTC 59.370 44.000 0.00 1.83 41.78 1.75
185 186 8.497910 TCTAATTCTGGGATTAGAATAGTGCT 57.502 34.615 8.44 0.00 44.43 4.40
186 187 9.601810 TCTAATTCTGGGATTAGAATAGTGCTA 57.398 33.333 8.44 0.00 44.43 3.49
187 188 9.646427 CTAATTCTGGGATTAGAATAGTGCTAC 57.354 37.037 3.22 0.00 44.43 3.58
188 189 6.420913 TTCTGGGATTAGAATAGTGCTACC 57.579 41.667 0.00 0.00 32.02 3.18
189 190 5.464069 TCTGGGATTAGAATAGTGCTACCA 58.536 41.667 0.00 0.00 0.00 3.25
190 191 6.084738 TCTGGGATTAGAATAGTGCTACCAT 58.915 40.000 0.00 0.00 0.00 3.55
191 192 7.246027 TCTGGGATTAGAATAGTGCTACCATA 58.754 38.462 0.00 0.00 0.00 2.74
192 193 7.901322 TCTGGGATTAGAATAGTGCTACCATAT 59.099 37.037 0.00 0.00 0.00 1.78
193 194 8.449423 TGGGATTAGAATAGTGCTACCATATT 57.551 34.615 0.00 0.00 0.00 1.28
194 195 8.890472 TGGGATTAGAATAGTGCTACCATATTT 58.110 33.333 0.00 0.00 0.00 1.40
195 196 9.167311 GGGATTAGAATAGTGCTACCATATTTG 57.833 37.037 0.00 0.00 0.00 2.32
196 197 9.726438 GGATTAGAATAGTGCTACCATATTTGT 57.274 33.333 0.00 0.00 0.00 2.83
207 208 3.198068 ACCATATTTGTAGAGCAGCACG 58.802 45.455 0.00 0.00 0.00 5.34
211 212 0.966179 TTTGTAGAGCAGCACGGAGA 59.034 50.000 0.00 0.00 0.00 3.71
212 213 0.243907 TTGTAGAGCAGCACGGAGAC 59.756 55.000 0.00 0.00 0.00 3.36
213 214 0.893727 TGTAGAGCAGCACGGAGACA 60.894 55.000 0.00 0.00 0.00 3.41
219 220 0.742281 GCAGCACGGAGACACATGAT 60.742 55.000 0.00 0.00 0.00 2.45
263 264 9.491675 AGATGTCTATAGAAATCAAGCTTGATG 57.508 33.333 36.16 23.51 46.60 3.07
285 286 2.421952 GGAATGAGGTGCAGCAGGAATA 60.422 50.000 19.63 0.00 0.00 1.75
295 296 1.600957 CAGCAGGAATACGCATGGAAG 59.399 52.381 0.00 0.00 0.00 3.46
299 300 1.210478 AGGAATACGCATGGAAGCTGT 59.790 47.619 0.00 0.00 0.00 4.40
307 308 3.002791 CGCATGGAAGCTGTAGAAGAAA 58.997 45.455 0.00 0.00 0.00 2.52
310 311 4.397417 GCATGGAAGCTGTAGAAGAAATGT 59.603 41.667 0.00 0.00 0.00 2.71
311 312 5.448360 GCATGGAAGCTGTAGAAGAAATGTC 60.448 44.000 0.00 0.00 0.00 3.06
312 313 5.489792 TGGAAGCTGTAGAAGAAATGTCT 57.510 39.130 0.00 0.00 34.72 3.41
316 317 7.044798 GGAAGCTGTAGAAGAAATGTCTGTAT 58.955 38.462 0.00 0.00 33.05 2.29
328 329 5.991328 AATGTCTGTATATTTGTCCAGCG 57.009 39.130 0.00 0.00 0.00 5.18
343 344 3.429207 GTCCAGCGAAAGTCTACTTGAAC 59.571 47.826 0.00 0.00 36.12 3.18
348 349 5.346281 CAGCGAAAGTCTACTTGAACCTTAG 59.654 44.000 0.00 0.00 36.12 2.18
350 351 5.695363 GCGAAAGTCTACTTGAACCTTAGTT 59.305 40.000 0.00 0.00 35.25 2.24
361 362 5.313280 TGAACCTTAGTTGTACCACCAAT 57.687 39.130 0.00 0.00 35.94 3.16
364 365 8.148437 TGAACCTTAGTTGTACCACCAATATA 57.852 34.615 0.00 0.00 35.94 0.86
366 367 9.623000 GAACCTTAGTTGTACCACCAATATAAT 57.377 33.333 0.00 0.00 35.94 1.28
371 372 9.607988 TTAGTTGTACCACCAATATAATGTCTG 57.392 33.333 0.00 0.00 0.00 3.51
378 379 4.520492 CACCAATATAATGTCTGCCCCTTC 59.480 45.833 0.00 0.00 0.00 3.46
389 390 0.460635 TGCCCCTTCGTATACGCAAC 60.461 55.000 20.42 6.94 39.60 4.17
400 401 3.666797 CGTATACGCAACGCAAGATCATA 59.333 43.478 13.08 0.00 43.62 2.15
411 412 4.126437 CGCAAGATCATATGGGTACACAA 58.874 43.478 0.00 0.00 43.02 3.33
428 429 4.858935 ACACAATGTGAACATGTACAAGC 58.141 39.130 21.34 0.00 36.96 4.01
458 463 2.011540 GGAGTGCCGGAGTAGAAAAG 57.988 55.000 5.05 0.00 0.00 2.27
474 479 5.779529 AGAAAAGAATTGCAGCTCAAAGA 57.220 34.783 0.00 0.00 38.34 2.52
476 481 6.756221 AGAAAAGAATTGCAGCTCAAAGAAT 58.244 32.000 0.00 0.00 38.34 2.40
477 482 6.645415 AGAAAAGAATTGCAGCTCAAAGAATG 59.355 34.615 0.00 0.00 38.34 2.67
533 538 8.774586 TGTTTTCTTGACAGAAGCTACTATTTC 58.225 33.333 0.00 0.00 40.28 2.17
591 601 3.155501 ACTCGGTTCTAGTACAAGCACT 58.844 45.455 1.69 0.00 0.00 4.40
594 604 2.230508 CGGTTCTAGTACAAGCACTGGA 59.769 50.000 1.69 0.00 34.59 3.86
597 607 5.246307 GGTTCTAGTACAAGCACTGGATTT 58.754 41.667 1.69 0.00 36.13 2.17
604 615 5.810587 AGTACAAGCACTGGATTTATGTACG 59.189 40.000 0.00 0.00 43.77 3.67
614 625 3.624410 GGATTTATGTACGGTTGACCCAC 59.376 47.826 0.00 0.00 0.00 4.61
618 629 1.049402 TGTACGGTTGACCCACATGA 58.951 50.000 0.00 0.00 0.00 3.07
631 642 2.634940 CCCACATGATCACCCCTACTAG 59.365 54.545 0.00 0.00 0.00 2.57
632 643 3.309296 CCACATGATCACCCCTACTAGT 58.691 50.000 0.00 0.00 0.00 2.57
633 644 4.480115 CCACATGATCACCCCTACTAGTA 58.520 47.826 0.00 1.89 0.00 1.82
634 645 5.087323 CCACATGATCACCCCTACTAGTAT 58.913 45.833 2.33 0.00 0.00 2.12
635 646 5.047021 CCACATGATCACCCCTACTAGTATG 60.047 48.000 2.33 0.21 0.00 2.39
636 647 4.528596 ACATGATCACCCCTACTAGTATGC 59.471 45.833 2.33 0.00 0.00 3.14
638 649 3.116900 TGATCACCCCTACTAGTATGCCA 60.117 47.826 2.33 0.00 0.00 4.92
639 650 3.630625 TCACCCCTACTAGTATGCCAT 57.369 47.619 2.33 0.00 0.00 4.40
640 651 3.936461 TCACCCCTACTAGTATGCCATT 58.064 45.455 2.33 0.00 0.00 3.16
641 652 3.646162 TCACCCCTACTAGTATGCCATTG 59.354 47.826 2.33 0.00 0.00 2.82
645 656 3.307059 CCCTACTAGTATGCCATTGCCTC 60.307 52.174 2.33 0.00 36.33 4.70
646 657 2.938956 ACTAGTATGCCATTGCCTCC 57.061 50.000 0.00 0.00 36.33 4.30
649 660 2.834638 AGTATGCCATTGCCTCCTTT 57.165 45.000 0.00 0.00 36.33 3.11
652 663 4.808042 AGTATGCCATTGCCTCCTTTTAT 58.192 39.130 0.00 0.00 36.33 1.40
654 665 3.891422 TGCCATTGCCTCCTTTTATTG 57.109 42.857 0.00 0.00 36.33 1.90
699 727 1.645710 ACCTCCTCCCTTGTACACAG 58.354 55.000 0.00 0.00 0.00 3.66
710 738 1.153628 GTACACAGCGCCCGAGATT 60.154 57.895 2.29 0.00 0.00 2.40
714 742 2.821366 CAGCGCCCGAGATTGCTT 60.821 61.111 2.29 0.00 34.99 3.91
726 755 2.157738 AGATTGCTTGAGAACAGCACC 58.842 47.619 0.00 0.00 38.37 5.01
740 769 2.260869 GCACCACCAGAACACGCAT 61.261 57.895 0.00 0.00 0.00 4.73
745 774 2.500098 ACCACCAGAACACGCATAGTAT 59.500 45.455 0.00 0.00 0.00 2.12
794 832 1.979155 GCCCTCTGCCCCAAGTTTC 60.979 63.158 0.00 0.00 0.00 2.78
796 834 1.460255 CCTCTGCCCCAAGTTTCCA 59.540 57.895 0.00 0.00 0.00 3.53
837 875 1.523758 CTTCCTAAGCACACCACACC 58.476 55.000 0.00 0.00 0.00 4.16
854 899 6.607198 CACCACACCCTCTTCCATATAAATTT 59.393 38.462 0.00 0.00 0.00 1.82
914 959 6.207417 CCTCTCTTCTATCACTCAGAGATTCC 59.793 46.154 3.79 0.00 40.75 3.01
924 969 3.195396 ACTCAGAGATTCCTCACTCTTGC 59.805 47.826 3.79 0.00 40.85 4.01
939 984 0.825010 CTTGCCTTGTGTCCTTGCCT 60.825 55.000 0.00 0.00 0.00 4.75
986 1044 2.768253 TCTCACAATCGCTGACCAAT 57.232 45.000 0.00 0.00 0.00 3.16
1029 1087 0.947244 GCATGGCTTCCGTATCAAGG 59.053 55.000 0.00 0.00 0.00 3.61
1222 1455 2.191354 CTGCGATGCACACCCAGTTG 62.191 60.000 0.00 0.00 33.79 3.16
1359 4570 2.170187 CTCTGGAAGCTAAGATGGCTGT 59.830 50.000 0.00 0.00 40.19 4.40
1575 6250 5.710567 TCTGTACCCACGATATATCTTCAGG 59.289 44.000 10.93 7.11 0.00 3.86
1586 6261 9.924650 ACGATATATCTTCAGGTTTTATGGTAC 57.075 33.333 10.93 0.00 0.00 3.34
1735 6418 0.179234 TCAACCAGTGTTTCGAGCCA 59.821 50.000 0.00 0.00 30.42 4.75
1739 6422 2.357517 AGTGTTTCGAGCCAGGCG 60.358 61.111 5.55 0.00 0.00 5.52
1782 6465 1.000506 GGAGCTCACTGGTTACGACAA 59.999 52.381 17.19 0.00 0.00 3.18
1813 6502 1.186917 CCATGGGGAAGCAGCACAAA 61.187 55.000 2.85 0.00 35.59 2.83
1865 6554 2.034066 CCCACGTGGCAATGGAGT 59.966 61.111 29.75 0.00 38.34 3.85
1954 6643 1.583054 CCAAGCTTCTACGGGTATGC 58.417 55.000 0.00 0.00 0.00 3.14
1988 6681 3.068448 TGCATTGTATGATGGTTGCATCC 59.932 43.478 6.88 6.88 35.36 3.51
2183 7072 3.132824 GGATTATGGCTTCAGTTTTGGGG 59.867 47.826 0.00 0.00 0.00 4.96
2184 7073 3.534357 TTATGGCTTCAGTTTTGGGGA 57.466 42.857 0.00 0.00 0.00 4.81
2185 7074 2.397044 ATGGCTTCAGTTTTGGGGAA 57.603 45.000 0.00 0.00 0.00 3.97
2186 7075 2.166907 TGGCTTCAGTTTTGGGGAAA 57.833 45.000 0.00 0.00 0.00 3.13
2187 7076 2.688477 TGGCTTCAGTTTTGGGGAAAT 58.312 42.857 0.00 0.00 0.00 2.17
2188 7077 3.850752 TGGCTTCAGTTTTGGGGAAATA 58.149 40.909 0.00 0.00 0.00 1.40
2189 7078 3.576550 TGGCTTCAGTTTTGGGGAAATAC 59.423 43.478 0.00 0.00 0.00 1.89
2190 7079 3.576550 GGCTTCAGTTTTGGGGAAATACA 59.423 43.478 0.00 0.00 0.00 2.29
2191 7080 4.556233 GCTTCAGTTTTGGGGAAATACAC 58.444 43.478 0.00 0.00 0.00 2.90
2192 7081 4.280929 GCTTCAGTTTTGGGGAAATACACT 59.719 41.667 0.00 0.00 0.00 3.55
2193 7082 5.221441 GCTTCAGTTTTGGGGAAATACACTT 60.221 40.000 0.00 0.00 0.00 3.16
2194 7083 6.399639 TTCAGTTTTGGGGAAATACACTTC 57.600 37.500 0.00 0.00 0.00 3.01
2195 7084 4.517453 TCAGTTTTGGGGAAATACACTTCG 59.483 41.667 0.00 0.00 0.00 3.79
2196 7085 3.824443 AGTTTTGGGGAAATACACTTCGG 59.176 43.478 0.00 0.00 0.00 4.30
2197 7086 3.791953 TTTGGGGAAATACACTTCGGA 57.208 42.857 0.00 0.00 0.00 4.55
2198 7087 3.791953 TTGGGGAAATACACTTCGGAA 57.208 42.857 0.00 0.00 0.00 4.30
2199 7088 3.062122 TGGGGAAATACACTTCGGAAC 57.938 47.619 0.00 0.00 0.00 3.62
2200 7089 2.290450 TGGGGAAATACACTTCGGAACC 60.290 50.000 0.00 0.00 0.00 3.62
2201 7090 2.026542 GGGGAAATACACTTCGGAACCT 60.027 50.000 0.00 0.00 0.00 3.50
2202 7091 3.007635 GGGAAATACACTTCGGAACCTG 58.992 50.000 0.00 0.00 0.00 4.00
2203 7092 3.007635 GGAAATACACTTCGGAACCTGG 58.992 50.000 0.00 0.00 0.00 4.45
2204 7093 3.558533 GGAAATACACTTCGGAACCTGGT 60.559 47.826 0.00 0.00 0.00 4.00
2205 7094 3.782656 AATACACTTCGGAACCTGGTT 57.217 42.857 12.82 12.82 0.00 3.67
2206 7095 2.536761 TACACTTCGGAACCTGGTTG 57.463 50.000 18.42 3.47 0.00 3.77
2207 7096 0.544697 ACACTTCGGAACCTGGTTGT 59.455 50.000 18.42 5.18 0.00 3.32
2208 7097 1.764134 ACACTTCGGAACCTGGTTGTA 59.236 47.619 18.42 0.00 0.00 2.41
2209 7098 2.370849 ACACTTCGGAACCTGGTTGTAT 59.629 45.455 18.42 0.00 0.00 2.29
2210 7099 3.579586 ACACTTCGGAACCTGGTTGTATA 59.420 43.478 18.42 0.00 0.00 1.47
2211 7100 4.224370 ACACTTCGGAACCTGGTTGTATAT 59.776 41.667 18.42 0.00 0.00 0.86
2212 7101 5.422970 ACACTTCGGAACCTGGTTGTATATA 59.577 40.000 18.42 0.00 0.00 0.86
2213 7102 5.751990 CACTTCGGAACCTGGTTGTATATAC 59.248 44.000 18.42 5.89 0.00 1.47
2214 7103 5.422970 ACTTCGGAACCTGGTTGTATATACA 59.577 40.000 18.42 11.62 0.00 2.29
2215 7104 5.266733 TCGGAACCTGGTTGTATATACAC 57.733 43.478 18.42 10.24 35.64 2.90
2216 7105 4.099881 TCGGAACCTGGTTGTATATACACC 59.900 45.833 18.42 17.88 35.64 4.16
2217 7106 4.141892 CGGAACCTGGTTGTATATACACCA 60.142 45.833 23.91 23.91 35.64 4.17
2218 7107 5.454187 CGGAACCTGGTTGTATATACACCAT 60.454 44.000 24.86 16.57 37.04 3.55
2219 7108 5.763204 GGAACCTGGTTGTATATACACCATG 59.237 44.000 24.86 23.79 37.04 3.66
2220 7109 5.968676 ACCTGGTTGTATATACACCATGT 57.031 39.130 24.86 24.20 37.04 3.21
2221 7110 6.321821 ACCTGGTTGTATATACACCATGTT 57.678 37.500 24.86 15.44 37.04 2.71
2222 7111 6.727394 ACCTGGTTGTATATACACCATGTTT 58.273 36.000 24.86 12.80 37.04 2.83
2223 7112 7.179269 ACCTGGTTGTATATACACCATGTTTT 58.821 34.615 24.86 12.36 37.04 2.43
2224 7113 7.672239 ACCTGGTTGTATATACACCATGTTTTT 59.328 33.333 24.86 12.13 37.04 1.94
2292 7181 9.659830 TTTAGAATAAACTTGACTTTCTTTCGC 57.340 29.630 0.00 0.00 0.00 4.70
2293 7182 7.259290 AGAATAAACTTGACTTTCTTTCGCA 57.741 32.000 0.00 0.00 0.00 5.10
2294 7183 7.132863 AGAATAAACTTGACTTTCTTTCGCAC 58.867 34.615 0.00 0.00 0.00 5.34
2295 7184 4.965119 AAACTTGACTTTCTTTCGCACT 57.035 36.364 0.00 0.00 0.00 4.40
2296 7185 7.724305 ATAAACTTGACTTTCTTTCGCACTA 57.276 32.000 0.00 0.00 0.00 2.74
2297 7186 5.405331 AACTTGACTTTCTTTCGCACTAC 57.595 39.130 0.00 0.00 0.00 2.73
2298 7187 4.694339 ACTTGACTTTCTTTCGCACTACT 58.306 39.130 0.00 0.00 0.00 2.57
2299 7188 5.839621 ACTTGACTTTCTTTCGCACTACTA 58.160 37.500 0.00 0.00 0.00 1.82
2300 7189 6.456501 ACTTGACTTTCTTTCGCACTACTAT 58.543 36.000 0.00 0.00 0.00 2.12
2301 7190 7.600065 ACTTGACTTTCTTTCGCACTACTATA 58.400 34.615 0.00 0.00 0.00 1.31
2302 7191 7.755822 ACTTGACTTTCTTTCGCACTACTATAG 59.244 37.037 0.00 0.00 0.00 1.31
2303 7192 7.387119 TGACTTTCTTTCGCACTACTATAGA 57.613 36.000 6.78 0.00 0.00 1.98
2304 7193 7.823665 TGACTTTCTTTCGCACTACTATAGAA 58.176 34.615 6.78 0.00 0.00 2.10
2305 7194 8.301720 TGACTTTCTTTCGCACTACTATAGAAA 58.698 33.333 6.78 0.00 0.00 2.52
2306 7195 9.303537 GACTTTCTTTCGCACTACTATAGAAAT 57.696 33.333 6.78 0.00 31.90 2.17
2307 7196 9.654663 ACTTTCTTTCGCACTACTATAGAAATT 57.345 29.630 6.78 0.00 31.90 1.82
2311 7200 9.647797 TCTTTCGCACTACTATAGAAATTTTCA 57.352 29.630 6.78 0.00 31.55 2.69
2314 7203 8.365399 TCGCACTACTATAGAAATTTTCATGG 57.635 34.615 6.78 7.39 0.00 3.66
2315 7204 7.441157 TCGCACTACTATAGAAATTTTCATGGG 59.559 37.037 6.78 2.28 0.00 4.00
2316 7205 7.441157 CGCACTACTATAGAAATTTTCATGGGA 59.559 37.037 6.78 2.01 0.00 4.37
2317 7206 9.120538 GCACTACTATAGAAATTTTCATGGGAA 57.879 33.333 6.78 0.00 0.00 3.97
2344 7233 4.799564 AAACAAAGTTGACTTCAAGGCA 57.200 36.364 0.00 0.00 36.39 4.75
2345 7234 4.799564 AACAAAGTTGACTTCAAGGCAA 57.200 36.364 0.00 0.00 41.84 4.52
2346 7235 4.799564 ACAAAGTTGACTTCAAGGCAAA 57.200 36.364 7.44 0.00 46.30 3.68
2347 7236 5.146010 ACAAAGTTGACTTCAAGGCAAAA 57.854 34.783 7.44 0.00 46.30 2.44
2348 7237 5.546526 ACAAAGTTGACTTCAAGGCAAAAA 58.453 33.333 7.44 0.00 46.30 1.94
2384 7273 9.959749 TTATTTGATTTTAGGTCACTTTCACAC 57.040 29.630 0.00 0.00 0.00 3.82
2385 7274 7.639113 TTTGATTTTAGGTCACTTTCACACT 57.361 32.000 0.00 0.00 0.00 3.55
2386 7275 8.740123 TTTGATTTTAGGTCACTTTCACACTA 57.260 30.769 0.00 0.00 0.00 2.74
2387 7276 8.918202 TTGATTTTAGGTCACTTTCACACTAT 57.082 30.769 0.00 0.00 0.00 2.12
2388 7277 8.918202 TGATTTTAGGTCACTTTCACACTATT 57.082 30.769 0.00 0.00 0.00 1.73
2389 7278 9.349713 TGATTTTAGGTCACTTTCACACTATTT 57.650 29.630 0.00 0.00 0.00 1.40
2393 7282 6.803154 AGGTCACTTTCACACTATTTTAGC 57.197 37.500 0.00 0.00 0.00 3.09
2394 7283 6.534634 AGGTCACTTTCACACTATTTTAGCT 58.465 36.000 0.00 0.00 0.00 3.32
2395 7284 7.676947 AGGTCACTTTCACACTATTTTAGCTA 58.323 34.615 0.00 0.00 0.00 3.32
2396 7285 8.154856 AGGTCACTTTCACACTATTTTAGCTAA 58.845 33.333 0.86 0.86 0.00 3.09
2397 7286 8.780249 GGTCACTTTCACACTATTTTAGCTAAA 58.220 33.333 14.96 14.96 0.00 1.85
2430 7319 5.351948 TTTTGAAAAGAAGTCAAAGGGGG 57.648 39.130 0.47 0.00 43.76 5.40
2448 7337 4.431416 GGGGGTTTTCTTTTTGTGGATT 57.569 40.909 0.00 0.00 0.00 3.01
2449 7338 4.787551 GGGGGTTTTCTTTTTGTGGATTT 58.212 39.130 0.00 0.00 0.00 2.17
2450 7339 5.197451 GGGGGTTTTCTTTTTGTGGATTTT 58.803 37.500 0.00 0.00 0.00 1.82
2451 7340 5.654650 GGGGGTTTTCTTTTTGTGGATTTTT 59.345 36.000 0.00 0.00 0.00 1.94
2473 7362 7.504924 TTTTTCTCACAAGTACAATGGTAGG 57.495 36.000 0.00 0.00 0.00 3.18
2474 7363 5.818678 TTCTCACAAGTACAATGGTAGGT 57.181 39.130 0.00 0.00 0.00 3.08
2475 7364 5.401531 TCTCACAAGTACAATGGTAGGTC 57.598 43.478 0.00 0.00 0.00 3.85
2476 7365 4.836175 TCTCACAAGTACAATGGTAGGTCA 59.164 41.667 0.00 0.00 0.00 4.02
2477 7366 5.305902 TCTCACAAGTACAATGGTAGGTCAA 59.694 40.000 0.00 0.00 0.00 3.18
2478 7367 5.547465 TCACAAGTACAATGGTAGGTCAAG 58.453 41.667 0.00 0.00 0.00 3.02
2479 7368 5.071250 TCACAAGTACAATGGTAGGTCAAGT 59.929 40.000 0.00 0.00 0.00 3.16
2480 7369 5.763204 CACAAGTACAATGGTAGGTCAAGTT 59.237 40.000 0.00 0.00 0.00 2.66
2481 7370 6.262273 CACAAGTACAATGGTAGGTCAAGTTT 59.738 38.462 0.00 0.00 0.00 2.66
2482 7371 7.442969 CACAAGTACAATGGTAGGTCAAGTTTA 59.557 37.037 0.00 0.00 0.00 2.01
2483 7372 8.161425 ACAAGTACAATGGTAGGTCAAGTTTAT 58.839 33.333 0.00 0.00 0.00 1.40
2484 7373 9.010029 CAAGTACAATGGTAGGTCAAGTTTATT 57.990 33.333 0.00 0.00 0.00 1.40
2485 7374 9.582648 AAGTACAATGGTAGGTCAAGTTTATTT 57.417 29.630 0.00 0.00 0.00 1.40
2486 7375 9.227777 AGTACAATGGTAGGTCAAGTTTATTTC 57.772 33.333 0.00 0.00 0.00 2.17
2487 7376 9.005777 GTACAATGGTAGGTCAAGTTTATTTCA 57.994 33.333 0.00 0.00 0.00 2.69
2488 7377 8.472007 ACAATGGTAGGTCAAGTTTATTTCAA 57.528 30.769 0.00 0.00 0.00 2.69
2489 7378 8.919145 ACAATGGTAGGTCAAGTTTATTTCAAA 58.081 29.630 0.00 0.00 0.00 2.69
2490 7379 9.757227 CAATGGTAGGTCAAGTTTATTTCAAAA 57.243 29.630 0.00 0.00 0.00 2.44
2559 7448 7.051696 TCCATATAGGATGTAGATACACCCA 57.948 40.000 6.17 0.00 42.67 4.51
2560 7449 7.662083 TCCATATAGGATGTAGATACACCCAT 58.338 38.462 6.17 1.01 42.67 4.00
2561 7450 7.565029 TCCATATAGGATGTAGATACACCCATG 59.435 40.741 6.17 1.52 42.67 3.66
2562 7451 7.565029 CCATATAGGATGTAGATACACCCATGA 59.435 40.741 6.17 0.00 42.67 3.07
2563 7452 8.981659 CATATAGGATGTAGATACACCCATGAA 58.018 37.037 6.17 0.00 42.67 2.57
2564 7453 5.552870 AGGATGTAGATACACCCATGAAC 57.447 43.478 6.17 0.00 42.67 3.18
2565 7454 4.348168 AGGATGTAGATACACCCATGAACC 59.652 45.833 6.17 0.00 42.67 3.62
2566 7455 4.102524 GGATGTAGATACACCCATGAACCA 59.897 45.833 0.00 0.00 39.80 3.67
2567 7456 5.397447 GGATGTAGATACACCCATGAACCAA 60.397 44.000 0.00 0.00 39.80 3.67
2568 7457 5.506730 TGTAGATACACCCATGAACCAAA 57.493 39.130 0.00 0.00 0.00 3.28
2569 7458 5.250200 TGTAGATACACCCATGAACCAAAC 58.750 41.667 0.00 0.00 0.00 2.93
2570 7459 3.343617 AGATACACCCATGAACCAAACG 58.656 45.455 0.00 0.00 0.00 3.60
2571 7460 2.642154 TACACCCATGAACCAAACGT 57.358 45.000 0.00 0.00 0.00 3.99
2572 7461 1.314730 ACACCCATGAACCAAACGTC 58.685 50.000 0.00 0.00 0.00 4.34
2573 7462 0.596082 CACCCATGAACCAAACGTCC 59.404 55.000 0.00 0.00 0.00 4.79
2574 7463 0.887387 ACCCATGAACCAAACGTCCG 60.887 55.000 0.00 0.00 0.00 4.79
2575 7464 0.887387 CCCATGAACCAAACGTCCGT 60.887 55.000 0.00 0.00 0.00 4.69
2576 7465 0.237235 CCATGAACCAAACGTCCGTG 59.763 55.000 0.00 0.00 0.00 4.94
2577 7466 0.941542 CATGAACCAAACGTCCGTGT 59.058 50.000 0.00 0.00 0.00 4.49
2578 7467 1.070175 CATGAACCAAACGTCCGTGTC 60.070 52.381 0.00 0.00 0.00 3.67
2583 7472 1.226030 CCAAACGTCCGTGTCCTTCC 61.226 60.000 0.00 0.00 0.00 3.46
2699 8468 4.007659 GACACTTATTTTGGATCGGTGGT 58.992 43.478 0.00 0.00 0.00 4.16
2939 8730 2.245159 TGGATCGATGGATGAACTGC 57.755 50.000 0.54 0.00 31.51 4.40
2940 8731 1.485895 TGGATCGATGGATGAACTGCA 59.514 47.619 0.54 0.00 31.51 4.41
2941 8732 1.869767 GGATCGATGGATGAACTGCAC 59.130 52.381 0.54 0.00 31.51 4.57
2942 8733 1.524355 GATCGATGGATGAACTGCACG 59.476 52.381 0.54 0.00 31.51 5.34
2943 8734 0.530288 TCGATGGATGAACTGCACGA 59.470 50.000 0.00 0.00 0.00 4.35
2944 8735 1.136891 TCGATGGATGAACTGCACGAT 59.863 47.619 0.00 0.00 0.00 3.73
2945 8736 1.259770 CGATGGATGAACTGCACGATG 59.740 52.381 0.00 0.00 0.00 3.84
2980 8775 5.586243 TCCTTGAGAATGTAACTATGCAAGC 59.414 40.000 0.00 0.00 32.40 4.01
2993 8790 1.639722 TGCAAGCTGGTAGTAGTGGA 58.360 50.000 0.00 0.00 0.00 4.02
3063 8863 0.600057 GAGCAAAACTCCCAAGCTGG 59.400 55.000 0.00 0.00 39.75 4.85
3241 9047 0.105593 ATGCCGCTCTAGTCATGGTG 59.894 55.000 0.00 0.00 0.00 4.17
3323 9151 2.816087 CCATGAGGAGACACAAAAGTGG 59.184 50.000 0.00 0.00 36.89 4.00
3383 9211 9.702726 CGATGTCAAAATAGTAGTAAAATGTGG 57.297 33.333 0.00 0.00 0.00 4.17
3410 9239 9.072375 TCTATAGGATAAGAATAGGATGCATCG 57.928 37.037 20.15 0.30 0.00 3.84
3427 9256 1.599797 CGGGAATTCGTATGGGGGC 60.600 63.158 0.00 0.00 0.00 5.80
3520 9352 4.640855 ACACAGACGGCGACCACG 62.641 66.667 16.62 1.20 42.93 4.94
3589 11747 2.928116 GACGCATAAACCGACTAGCTTT 59.072 45.455 0.00 0.00 0.00 3.51
3590 11748 3.332034 ACGCATAAACCGACTAGCTTTT 58.668 40.909 0.00 0.00 0.00 2.27
3591 11749 3.749609 ACGCATAAACCGACTAGCTTTTT 59.250 39.130 0.00 0.00 0.00 1.94
3613 11771 1.658994 TTTTTGAGCGTCAACCGACT 58.341 45.000 0.76 0.00 40.23 4.18
3614 11772 2.512485 TTTTGAGCGTCAACCGACTA 57.488 45.000 0.76 0.00 40.23 2.59
3616 11774 0.388134 TTGAGCGTCAACCGACTAGC 60.388 55.000 0.00 0.00 40.23 3.42
3617 11775 1.516603 GAGCGTCAACCGACTAGCC 60.517 63.158 0.00 0.00 40.23 3.93
3765 11946 3.450904 AGGTTCCACAGGATAAGCTACA 58.549 45.455 0.00 0.00 0.00 2.74
3815 11996 2.918131 GCGTTGCATGTTTCAGGAAGTC 60.918 50.000 0.00 0.00 0.00 3.01
3836 12018 6.851318 AGTCTAATTACTCCCTACCTCCTAC 58.149 44.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.035739 TAGTTCCCGTCCCTTGCAAC 59.964 55.000 0.00 0.00 0.00 4.17
1 2 0.323629 CTAGTTCCCGTCCCTTGCAA 59.676 55.000 0.00 0.00 0.00 4.08
2 3 0.543410 TCTAGTTCCCGTCCCTTGCA 60.543 55.000 0.00 0.00 0.00 4.08
3 4 0.831307 ATCTAGTTCCCGTCCCTTGC 59.169 55.000 0.00 0.00 0.00 4.01
4 5 1.139058 CCATCTAGTTCCCGTCCCTTG 59.861 57.143 0.00 0.00 0.00 3.61
5 6 1.497161 CCATCTAGTTCCCGTCCCTT 58.503 55.000 0.00 0.00 0.00 3.95
6 7 1.049289 GCCATCTAGTTCCCGTCCCT 61.049 60.000 0.00 0.00 0.00 4.20
7 8 1.446366 GCCATCTAGTTCCCGTCCC 59.554 63.158 0.00 0.00 0.00 4.46
8 9 1.067582 CGCCATCTAGTTCCCGTCC 59.932 63.158 0.00 0.00 0.00 4.79
9 10 1.591863 GCGCCATCTAGTTCCCGTC 60.592 63.158 0.00 0.00 0.00 4.79
10 11 2.058595 AGCGCCATCTAGTTCCCGT 61.059 57.895 2.29 0.00 0.00 5.28
11 12 1.592669 CAGCGCCATCTAGTTCCCG 60.593 63.158 2.29 0.00 0.00 5.14
12 13 1.227674 CCAGCGCCATCTAGTTCCC 60.228 63.158 2.29 0.00 0.00 3.97
13 14 0.107654 AACCAGCGCCATCTAGTTCC 60.108 55.000 2.29 0.00 0.00 3.62
14 15 1.291132 GAACCAGCGCCATCTAGTTC 58.709 55.000 2.29 4.93 30.18 3.01
15 16 0.460284 CGAACCAGCGCCATCTAGTT 60.460 55.000 2.29 0.00 0.00 2.24
16 17 1.141881 CGAACCAGCGCCATCTAGT 59.858 57.895 2.29 0.00 0.00 2.57
17 18 1.592669 CCGAACCAGCGCCATCTAG 60.593 63.158 2.29 0.00 0.00 2.43
18 19 2.499205 CCGAACCAGCGCCATCTA 59.501 61.111 2.29 0.00 0.00 1.98
19 20 4.473520 CCCGAACCAGCGCCATCT 62.474 66.667 2.29 0.00 0.00 2.90
26 27 3.647771 AACCTCCCCCGAACCAGC 61.648 66.667 0.00 0.00 0.00 4.85
27 28 2.351276 CAACCTCCCCCGAACCAG 59.649 66.667 0.00 0.00 0.00 4.00
28 29 3.253838 CCAACCTCCCCCGAACCA 61.254 66.667 0.00 0.00 0.00 3.67
29 30 4.043100 CCCAACCTCCCCCGAACC 62.043 72.222 0.00 0.00 0.00 3.62
30 31 4.043100 CCCCAACCTCCCCCGAAC 62.043 72.222 0.00 0.00 0.00 3.95
31 32 3.589627 ATCCCCAACCTCCCCCGAA 62.590 63.158 0.00 0.00 0.00 4.30
32 33 4.033251 ATCCCCAACCTCCCCCGA 62.033 66.667 0.00 0.00 0.00 5.14
33 34 3.489513 GATCCCCAACCTCCCCCG 61.490 72.222 0.00 0.00 0.00 5.73
34 35 3.489513 CGATCCCCAACCTCCCCC 61.490 72.222 0.00 0.00 0.00 5.40
35 36 3.489513 CCGATCCCCAACCTCCCC 61.490 72.222 0.00 0.00 0.00 4.81
36 37 3.489513 CCCGATCCCCAACCTCCC 61.490 72.222 0.00 0.00 0.00 4.30
37 38 3.489513 CCCCGATCCCCAACCTCC 61.490 72.222 0.00 0.00 0.00 4.30
38 39 2.366435 TCCCCGATCCCCAACCTC 60.366 66.667 0.00 0.00 0.00 3.85
39 40 2.366972 CTCCCCGATCCCCAACCT 60.367 66.667 0.00 0.00 0.00 3.50
40 41 3.489513 CCTCCCCGATCCCCAACC 61.490 72.222 0.00 0.00 0.00 3.77
41 42 3.489513 CCCTCCCCGATCCCCAAC 61.490 72.222 0.00 0.00 0.00 3.77
42 43 4.835456 CCCCTCCCCGATCCCCAA 62.835 72.222 0.00 0.00 0.00 4.12
53 54 4.791069 TAGTCCACCGCCCCCTCC 62.791 72.222 0.00 0.00 0.00 4.30
54 55 3.155167 CTAGTCCACCGCCCCCTC 61.155 72.222 0.00 0.00 0.00 4.30
55 56 4.007323 ACTAGTCCACCGCCCCCT 62.007 66.667 0.00 0.00 0.00 4.79
56 57 3.782443 CACTAGTCCACCGCCCCC 61.782 72.222 0.00 0.00 0.00 5.40
57 58 3.782443 CCACTAGTCCACCGCCCC 61.782 72.222 0.00 0.00 0.00 5.80
58 59 3.782443 CCCACTAGTCCACCGCCC 61.782 72.222 0.00 0.00 0.00 6.13
59 60 2.682494 TCCCACTAGTCCACCGCC 60.682 66.667 0.00 0.00 0.00 6.13
60 61 1.982938 ACTCCCACTAGTCCACCGC 60.983 63.158 0.00 0.00 0.00 5.68
61 62 1.605058 CCACTCCCACTAGTCCACCG 61.605 65.000 0.00 0.00 0.00 4.94
62 63 1.265454 CCCACTCCCACTAGTCCACC 61.265 65.000 0.00 0.00 0.00 4.61
63 64 1.900545 GCCCACTCCCACTAGTCCAC 61.901 65.000 0.00 0.00 0.00 4.02
64 65 1.612442 GCCCACTCCCACTAGTCCA 60.612 63.158 0.00 0.00 0.00 4.02
65 66 2.722201 CGCCCACTCCCACTAGTCC 61.722 68.421 0.00 0.00 0.00 3.85
66 67 1.982938 ACGCCCACTCCCACTAGTC 60.983 63.158 0.00 0.00 0.00 2.59
67 68 2.119832 ACGCCCACTCCCACTAGT 59.880 61.111 0.00 0.00 0.00 2.57
68 69 1.827399 AACACGCCCACTCCCACTAG 61.827 60.000 0.00 0.00 0.00 2.57
69 70 1.823169 GAACACGCCCACTCCCACTA 61.823 60.000 0.00 0.00 0.00 2.74
70 71 3.168528 AACACGCCCACTCCCACT 61.169 61.111 0.00 0.00 0.00 4.00
71 72 2.668550 GAACACGCCCACTCCCAC 60.669 66.667 0.00 0.00 0.00 4.61
72 73 1.990160 AAAGAACACGCCCACTCCCA 61.990 55.000 0.00 0.00 0.00 4.37
73 74 1.228154 AAAGAACACGCCCACTCCC 60.228 57.895 0.00 0.00 0.00 4.30
74 75 0.250338 AGAAAGAACACGCCCACTCC 60.250 55.000 0.00 0.00 0.00 3.85
75 76 1.594331 AAGAAAGAACACGCCCACTC 58.406 50.000 0.00 0.00 0.00 3.51
76 77 1.947456 GAAAGAAAGAACACGCCCACT 59.053 47.619 0.00 0.00 0.00 4.00
77 78 1.947456 AGAAAGAAAGAACACGCCCAC 59.053 47.619 0.00 0.00 0.00 4.61
78 79 2.218603 GAGAAAGAAAGAACACGCCCA 58.781 47.619 0.00 0.00 0.00 5.36
79 80 1.535896 GGAGAAAGAAAGAACACGCCC 59.464 52.381 0.00 0.00 0.00 6.13
80 81 2.480802 GAGGAGAAAGAAAGAACACGCC 59.519 50.000 0.00 0.00 0.00 5.68
81 82 2.155924 CGAGGAGAAAGAAAGAACACGC 59.844 50.000 0.00 0.00 0.00 5.34
82 83 2.731976 CCGAGGAGAAAGAAAGAACACG 59.268 50.000 0.00 0.00 0.00 4.49
83 84 3.067833 CCCGAGGAGAAAGAAAGAACAC 58.932 50.000 0.00 0.00 0.00 3.32
84 85 2.704065 ACCCGAGGAGAAAGAAAGAACA 59.296 45.455 0.00 0.00 0.00 3.18
85 86 3.404224 ACCCGAGGAGAAAGAAAGAAC 57.596 47.619 0.00 0.00 0.00 3.01
86 87 3.554337 CGAACCCGAGGAGAAAGAAAGAA 60.554 47.826 0.00 0.00 38.22 2.52
87 88 2.029290 CGAACCCGAGGAGAAAGAAAGA 60.029 50.000 0.00 0.00 38.22 2.52
88 89 2.338500 CGAACCCGAGGAGAAAGAAAG 58.662 52.381 0.00 0.00 38.22 2.62
89 90 1.001633 CCGAACCCGAGGAGAAAGAAA 59.998 52.381 0.00 0.00 38.22 2.52
90 91 0.606604 CCGAACCCGAGGAGAAAGAA 59.393 55.000 0.00 0.00 38.22 2.52
91 92 1.255667 CCCGAACCCGAGGAGAAAGA 61.256 60.000 0.00 0.00 38.22 2.52
92 93 1.218316 CCCGAACCCGAGGAGAAAG 59.782 63.158 0.00 0.00 38.22 2.62
93 94 1.228956 TCCCGAACCCGAGGAGAAA 60.229 57.895 0.00 0.00 38.22 2.52
94 95 1.681327 CTCCCGAACCCGAGGAGAA 60.681 63.158 13.36 0.00 46.67 2.87
95 96 2.044252 CTCCCGAACCCGAGGAGA 60.044 66.667 13.36 0.00 46.67 3.71
98 99 3.459063 GTCCTCCCGAACCCGAGG 61.459 72.222 0.00 0.00 46.07 4.63
99 100 3.459063 GGTCCTCCCGAACCCGAG 61.459 72.222 0.00 0.00 38.22 4.63
100 101 3.951769 GAGGTCCTCCCGAACCCGA 62.952 68.421 7.78 0.00 38.74 5.14
101 102 3.459063 GAGGTCCTCCCGAACCCG 61.459 72.222 7.78 0.00 38.74 5.28
102 103 3.082055 GGAGGTCCTCCCGAACCC 61.082 72.222 25.89 0.31 44.36 4.11
113 114 1.584380 ATATAGGACGCGCGGAGGTC 61.584 60.000 35.22 21.81 0.00 3.85
114 115 0.321919 TATATAGGACGCGCGGAGGT 60.322 55.000 35.22 13.53 0.00 3.85
115 116 0.377554 CTATATAGGACGCGCGGAGG 59.622 60.000 35.22 6.61 0.00 4.30
116 117 0.377554 CCTATATAGGACGCGCGGAG 59.622 60.000 35.22 15.88 46.63 4.63
117 118 1.028330 CCCTATATAGGACGCGCGGA 61.028 60.000 35.22 16.54 46.63 5.54
118 119 1.432251 CCCTATATAGGACGCGCGG 59.568 63.158 35.22 16.31 46.63 6.46
119 120 1.226603 GCCCTATATAGGACGCGCG 60.227 63.158 30.96 30.96 46.63 6.86
120 121 1.141234 GGCCCTATATAGGACGCGC 59.859 63.158 27.58 21.01 46.63 6.86
121 122 1.310933 ACGGCCCTATATAGGACGCG 61.311 60.000 29.78 24.06 46.63 6.01
122 123 0.455005 GACGGCCCTATATAGGACGC 59.545 60.000 29.78 24.19 46.63 5.19
123 124 1.101331 GGACGGCCCTATATAGGACG 58.899 60.000 28.93 28.93 46.63 4.79
124 125 1.101331 CGGACGGCCCTATATAGGAC 58.899 60.000 27.58 17.70 46.63 3.85
125 126 0.700564 ACGGACGGCCCTATATAGGA 59.299 55.000 27.58 0.00 46.63 2.94
126 127 0.815734 CACGGACGGCCCTATATAGG 59.184 60.000 20.43 20.43 43.25 2.57
127 128 1.830279 TCACGGACGGCCCTATATAG 58.170 55.000 0.00 2.46 0.00 1.31
128 129 2.291089 TGATCACGGACGGCCCTATATA 60.291 50.000 0.00 0.00 0.00 0.86
129 130 1.183549 GATCACGGACGGCCCTATAT 58.816 55.000 0.00 0.00 0.00 0.86
130 131 0.178984 TGATCACGGACGGCCCTATA 60.179 55.000 0.00 0.00 0.00 1.31
131 132 1.456892 TGATCACGGACGGCCCTAT 60.457 57.895 0.00 0.00 0.00 2.57
132 133 2.043752 TGATCACGGACGGCCCTA 60.044 61.111 0.00 0.00 0.00 3.53
133 134 3.461773 CTGATCACGGACGGCCCT 61.462 66.667 0.00 0.00 0.00 5.19
134 135 2.311688 ATTCTGATCACGGACGGCCC 62.312 60.000 0.00 0.00 0.00 5.80
135 136 0.387929 TATTCTGATCACGGACGGCC 59.612 55.000 0.00 0.00 0.00 6.13
136 137 1.859080 GTTATTCTGATCACGGACGGC 59.141 52.381 0.00 0.00 0.00 5.68
137 138 3.438297 AGTTATTCTGATCACGGACGG 57.562 47.619 0.00 0.00 0.00 4.79
138 139 6.677027 GAATAGTTATTCTGATCACGGACG 57.323 41.667 0.00 0.00 39.13 4.79
160 161 8.497910 AGCACTATTCTAATCCCAGAATTAGA 57.502 34.615 3.87 2.94 41.46 2.10
161 162 9.646427 GTAGCACTATTCTAATCCCAGAATTAG 57.354 37.037 3.87 0.00 41.46 1.73
162 163 8.594550 GGTAGCACTATTCTAATCCCAGAATTA 58.405 37.037 3.87 0.00 41.46 1.40
163 164 7.072454 TGGTAGCACTATTCTAATCCCAGAATT 59.928 37.037 3.87 0.00 41.46 2.17
164 165 6.558775 TGGTAGCACTATTCTAATCCCAGAAT 59.441 38.462 4.01 4.01 45.18 2.40
165 166 5.903010 TGGTAGCACTATTCTAATCCCAGAA 59.097 40.000 0.00 0.00 38.84 3.02
166 167 5.464069 TGGTAGCACTATTCTAATCCCAGA 58.536 41.667 0.00 0.00 0.00 3.86
167 168 5.808366 TGGTAGCACTATTCTAATCCCAG 57.192 43.478 0.00 0.00 0.00 4.45
168 169 8.449423 AATATGGTAGCACTATTCTAATCCCA 57.551 34.615 0.00 0.00 0.00 4.37
169 170 9.167311 CAAATATGGTAGCACTATTCTAATCCC 57.833 37.037 0.00 0.00 0.00 3.85
170 171 9.726438 ACAAATATGGTAGCACTATTCTAATCC 57.274 33.333 0.00 0.00 0.00 3.01
175 176 8.091449 GCTCTACAAATATGGTAGCACTATTCT 58.909 37.037 0.00 0.00 38.45 2.40
176 177 7.872993 TGCTCTACAAATATGGTAGCACTATTC 59.127 37.037 0.00 0.00 38.45 1.75
177 178 7.735917 TGCTCTACAAATATGGTAGCACTATT 58.264 34.615 0.00 0.68 38.45 1.73
178 179 7.303182 TGCTCTACAAATATGGTAGCACTAT 57.697 36.000 0.00 0.00 38.45 2.12
179 180 6.724893 TGCTCTACAAATATGGTAGCACTA 57.275 37.500 0.00 0.00 38.45 2.74
180 181 5.605534 CTGCTCTACAAATATGGTAGCACT 58.394 41.667 0.00 0.00 38.45 4.40
181 182 4.212214 GCTGCTCTACAAATATGGTAGCAC 59.788 45.833 0.00 5.50 38.45 4.40
182 183 4.141733 TGCTGCTCTACAAATATGGTAGCA 60.142 41.667 0.00 0.00 38.45 3.49
183 184 4.212214 GTGCTGCTCTACAAATATGGTAGC 59.788 45.833 0.00 0.00 38.45 3.58
184 185 4.445718 CGTGCTGCTCTACAAATATGGTAG 59.554 45.833 0.00 8.01 39.63 3.18
185 186 4.368315 CGTGCTGCTCTACAAATATGGTA 58.632 43.478 0.00 0.00 0.00 3.25
186 187 3.198068 CGTGCTGCTCTACAAATATGGT 58.802 45.455 0.00 0.00 0.00 3.55
187 188 2.545526 CCGTGCTGCTCTACAAATATGG 59.454 50.000 0.00 0.00 0.00 2.74
188 189 3.457234 TCCGTGCTGCTCTACAAATATG 58.543 45.455 0.00 0.00 0.00 1.78
189 190 3.384789 TCTCCGTGCTGCTCTACAAATAT 59.615 43.478 0.00 0.00 0.00 1.28
190 191 2.758423 TCTCCGTGCTGCTCTACAAATA 59.242 45.455 0.00 0.00 0.00 1.40
191 192 1.550524 TCTCCGTGCTGCTCTACAAAT 59.449 47.619 0.00 0.00 0.00 2.32
192 193 0.966179 TCTCCGTGCTGCTCTACAAA 59.034 50.000 0.00 0.00 0.00 2.83
193 194 0.243907 GTCTCCGTGCTGCTCTACAA 59.756 55.000 0.00 0.00 0.00 2.41
194 195 0.893727 TGTCTCCGTGCTGCTCTACA 60.894 55.000 0.00 0.00 0.00 2.74
195 196 0.456995 GTGTCTCCGTGCTGCTCTAC 60.457 60.000 0.00 0.00 0.00 2.59
196 197 0.893727 TGTGTCTCCGTGCTGCTCTA 60.894 55.000 0.00 0.00 0.00 2.43
197 198 1.539560 ATGTGTCTCCGTGCTGCTCT 61.540 55.000 0.00 0.00 0.00 4.09
219 220 7.161404 AGACATCTTGCTACTATTTTGACACA 58.839 34.615 0.00 0.00 0.00 3.72
254 255 2.731572 CACCTCATTCCCATCAAGCTT 58.268 47.619 0.00 0.00 0.00 3.74
263 264 1.751927 CCTGCTGCACCTCATTCCC 60.752 63.158 0.00 0.00 0.00 3.97
285 286 1.550524 TCTTCTACAGCTTCCATGCGT 59.449 47.619 0.00 0.00 38.13 5.24
307 308 5.276461 TCGCTGGACAAATATACAGACAT 57.724 39.130 0.00 0.00 32.86 3.06
310 311 5.730550 ACTTTCGCTGGACAAATATACAGA 58.269 37.500 0.00 0.00 32.86 3.41
311 312 5.812642 AGACTTTCGCTGGACAAATATACAG 59.187 40.000 0.00 0.00 0.00 2.74
312 313 5.730550 AGACTTTCGCTGGACAAATATACA 58.269 37.500 0.00 0.00 0.00 2.29
316 317 5.401531 AGTAGACTTTCGCTGGACAAATA 57.598 39.130 0.00 0.00 0.00 1.40
319 320 3.069016 TCAAGTAGACTTTCGCTGGACAA 59.931 43.478 0.00 0.00 33.11 3.18
320 321 2.626266 TCAAGTAGACTTTCGCTGGACA 59.374 45.455 0.00 0.00 33.11 4.02
324 325 3.654414 AGGTTCAAGTAGACTTTCGCTG 58.346 45.455 0.00 0.00 33.11 5.18
328 329 8.976471 GTACAACTAAGGTTCAAGTAGACTTTC 58.024 37.037 0.00 0.00 31.33 2.62
350 351 5.373222 GGCAGACATTATATTGGTGGTACA 58.627 41.667 0.00 0.00 0.00 2.90
361 362 5.106038 CGTATACGAAGGGGCAGACATTATA 60.106 44.000 20.58 0.00 43.02 0.98
364 365 2.223971 CGTATACGAAGGGGCAGACATT 60.224 50.000 20.58 0.00 43.02 2.71
366 367 0.742505 CGTATACGAAGGGGCAGACA 59.257 55.000 20.58 0.00 43.02 3.41
371 372 1.485032 CGTTGCGTATACGAAGGGGC 61.485 60.000 28.66 10.14 41.33 5.80
378 379 1.849829 TGATCTTGCGTTGCGTATACG 59.150 47.619 20.87 20.87 41.71 3.06
389 390 3.727726 TGTGTACCCATATGATCTTGCG 58.272 45.455 3.65 0.00 0.00 4.85
400 401 4.406456 ACATGTTCACATTGTGTACCCAT 58.594 39.130 19.78 12.93 33.87 4.00
411 412 3.433274 CGACAGCTTGTACATGTTCACAT 59.567 43.478 2.30 0.00 36.96 3.21
428 429 2.202623 GCACTCCGGCTACGACAG 60.203 66.667 0.00 0.00 44.60 3.51
474 479 7.944729 AGGAAATTATACACTTGCACTCATT 57.055 32.000 0.00 0.00 0.00 2.57
476 481 7.620880 ACTAGGAAATTATACACTTGCACTCA 58.379 34.615 0.00 0.00 0.00 3.41
477 482 9.250624 CTACTAGGAAATTATACACTTGCACTC 57.749 37.037 0.00 0.00 0.00 3.51
533 538 6.249035 TCTAAAGAATGCAAAAGTTACGGG 57.751 37.500 0.00 0.00 0.00 5.28
583 593 3.938963 CCGTACATAAATCCAGTGCTTGT 59.061 43.478 0.00 0.00 0.00 3.16
591 601 3.263681 TGGGTCAACCGTACATAAATCCA 59.736 43.478 0.00 0.00 44.64 3.41
594 604 4.289238 TGTGGGTCAACCGTACATAAAT 57.711 40.909 4.39 0.00 44.64 1.40
597 607 2.832733 TCATGTGGGTCAACCGTACATA 59.167 45.455 15.83 0.00 44.64 2.29
604 615 1.463674 GGTGATCATGTGGGTCAACC 58.536 55.000 0.00 0.00 40.81 3.77
614 625 4.081420 GGCATACTAGTAGGGGTGATCATG 60.081 50.000 15.83 3.96 0.00 3.07
618 629 3.630625 TGGCATACTAGTAGGGGTGAT 57.369 47.619 15.83 0.00 0.00 3.06
631 642 5.291971 CAATAAAAGGAGGCAATGGCATAC 58.708 41.667 10.05 0.00 43.71 2.39
632 643 4.344679 CCAATAAAAGGAGGCAATGGCATA 59.655 41.667 10.05 0.00 43.71 3.14
633 644 3.135167 CCAATAAAAGGAGGCAATGGCAT 59.865 43.478 10.05 0.00 43.71 4.40
634 645 2.500910 CCAATAAAAGGAGGCAATGGCA 59.499 45.455 10.05 0.00 43.71 4.92
635 646 2.765699 TCCAATAAAAGGAGGCAATGGC 59.234 45.455 0.00 0.00 40.13 4.40
636 647 4.026052 AGTCCAATAAAAGGAGGCAATGG 58.974 43.478 0.00 0.00 35.42 3.16
638 649 3.448660 GCAGTCCAATAAAAGGAGGCAAT 59.551 43.478 0.00 0.00 36.90 3.56
639 650 2.825532 GCAGTCCAATAAAAGGAGGCAA 59.174 45.455 0.00 0.00 36.90 4.52
640 651 2.041620 AGCAGTCCAATAAAAGGAGGCA 59.958 45.455 0.00 0.00 38.46 4.75
641 652 2.685388 GAGCAGTCCAATAAAAGGAGGC 59.315 50.000 0.00 0.00 35.42 4.70
699 727 2.817423 CTCAAGCAATCTCGGGCGC 61.817 63.158 0.00 0.00 34.54 6.53
710 738 0.819259 GGTGGTGCTGTTCTCAAGCA 60.819 55.000 0.00 0.00 36.09 3.91
714 742 0.836606 TTCTGGTGGTGCTGTTCTCA 59.163 50.000 0.00 0.00 0.00 3.27
726 755 3.521560 ACATACTATGCGTGTTCTGGTG 58.478 45.455 0.00 0.00 0.00 4.17
740 769 3.319405 GCTAGCTGGCTCTGAACATACTA 59.681 47.826 15.78 0.00 0.00 1.82
745 774 1.216444 CGCTAGCTGGCTCTGAACA 59.784 57.895 20.56 0.00 0.00 3.18
794 832 2.135933 GACAACCGACTTTGAGAGTGG 58.864 52.381 0.00 0.00 39.19 4.00
796 834 3.492829 GGAAGACAACCGACTTTGAGAGT 60.493 47.826 0.00 0.00 42.70 3.24
837 875 7.095355 CGGTTCGGTAAATTTATATGGAAGAGG 60.095 40.741 0.31 0.00 0.00 3.69
871 916 2.838202 GAGGTATTGACACAGGGAAGGA 59.162 50.000 0.00 0.00 0.00 3.36
914 959 1.071385 AGGACACAAGGCAAGAGTGAG 59.929 52.381 0.00 0.00 37.05 3.51
924 969 1.168714 GCTTAGGCAAGGACACAAGG 58.831 55.000 0.00 0.00 38.54 3.61
962 1015 2.200067 GTCAGCGATTGTGAGATGGAG 58.800 52.381 0.00 0.00 0.00 3.86
986 1044 0.612732 CTCCATTGGCTTGGCTTGGA 60.613 55.000 14.70 14.70 36.66 3.53
1029 1087 1.269102 GCAACATGAGCATGATCAGCC 60.269 52.381 19.71 2.02 41.20 4.85
1148 1208 2.808958 CGCCGCCGTAGTTCCATTG 61.809 63.158 0.00 0.00 0.00 2.82
1222 1455 2.622962 GCAGGGTTTGTGTACGGGC 61.623 63.158 0.00 0.00 0.00 6.13
1410 4621 2.131183 GCTGACTGACTGACTGTTGAC 58.869 52.381 0.00 0.00 0.00 3.18
1411 4622 1.756538 TGCTGACTGACTGACTGTTGA 59.243 47.619 0.00 0.00 0.00 3.18
1412 4623 2.133553 CTGCTGACTGACTGACTGTTG 58.866 52.381 0.00 0.00 0.00 3.33
1414 4625 1.339610 GACTGCTGACTGACTGACTGT 59.660 52.381 0.00 0.00 0.00 3.55
1415 4626 1.336702 GGACTGCTGACTGACTGACTG 60.337 57.143 0.00 0.00 0.00 3.51
1416 4627 0.965439 GGACTGCTGACTGACTGACT 59.035 55.000 0.00 0.00 0.00 3.41
1417 4628 0.676184 TGGACTGCTGACTGACTGAC 59.324 55.000 0.00 0.00 0.00 3.51
1418 4629 0.964700 CTGGACTGCTGACTGACTGA 59.035 55.000 0.00 0.00 0.00 3.41
1472 4777 9.926751 CACAAAAATTATAGCTCTGTGTATGAG 57.073 33.333 0.00 0.00 34.87 2.90
1477 4782 5.391950 CCGCACAAAAATTATAGCTCTGTGT 60.392 40.000 0.00 0.00 36.07 3.72
1586 6261 6.730175 ACGTTGTCATCAAGCTAGATAGTAG 58.270 40.000 0.00 0.00 33.97 2.57
1589 6264 5.621634 CGTACGTTGTCATCAAGCTAGATAG 59.378 44.000 7.22 0.00 33.97 2.08
1591 6266 4.142447 ACGTACGTTGTCATCAAGCTAGAT 60.142 41.667 16.72 0.00 33.97 1.98
1735 6418 1.528076 TGATTTGTGTGCCACGCCT 60.528 52.632 5.85 0.00 37.14 5.52
1739 6422 2.859806 GCTTGAGTGATTTGTGTGCCAC 60.860 50.000 0.00 0.00 34.56 5.01
1865 6554 1.292223 CCGCCGTGAAGAAGAAGGA 59.708 57.895 0.00 0.00 0.00 3.36
1942 6631 7.468084 GCAGAAAATTAATTGCATACCCGTAGA 60.468 37.037 0.39 0.00 36.59 2.59
2063 6948 6.038161 TGTGTTGTGAAAGTTACAATCCTGAG 59.962 38.462 0.00 0.00 39.88 3.35
2129 7017 4.095334 CAGTTAAGGGCCGTGGTTTTATAC 59.905 45.833 0.90 0.00 0.00 1.47
2183 7072 3.671716 ACCAGGTTCCGAAGTGTATTTC 58.328 45.455 0.00 0.00 0.00 2.17
2184 7073 3.782656 ACCAGGTTCCGAAGTGTATTT 57.217 42.857 0.00 0.00 0.00 1.40
2185 7074 3.181448 ACAACCAGGTTCCGAAGTGTATT 60.181 43.478 0.12 0.00 0.00 1.89
2186 7075 2.370849 ACAACCAGGTTCCGAAGTGTAT 59.629 45.455 0.12 0.00 0.00 2.29
2187 7076 1.764134 ACAACCAGGTTCCGAAGTGTA 59.236 47.619 0.12 0.00 0.00 2.90
2188 7077 0.544697 ACAACCAGGTTCCGAAGTGT 59.455 50.000 0.12 0.00 0.00 3.55
2189 7078 2.536761 TACAACCAGGTTCCGAAGTG 57.463 50.000 0.12 0.00 0.00 3.16
2190 7079 5.422970 TGTATATACAACCAGGTTCCGAAGT 59.577 40.000 13.24 0.00 32.40 3.01
2191 7080 5.751990 GTGTATATACAACCAGGTTCCGAAG 59.248 44.000 17.07 0.00 38.04 3.79
2192 7081 5.395546 GGTGTATATACAACCAGGTTCCGAA 60.396 44.000 18.58 0.00 37.94 4.30
2193 7082 4.099881 GGTGTATATACAACCAGGTTCCGA 59.900 45.833 18.58 0.00 37.94 4.55
2194 7083 4.141892 TGGTGTATATACAACCAGGTTCCG 60.142 45.833 24.72 0.00 43.13 4.30
2195 7084 5.362105 TGGTGTATATACAACCAGGTTCC 57.638 43.478 24.72 15.60 43.13 3.62
2196 7085 6.354130 ACATGGTGTATATACAACCAGGTTC 58.646 40.000 29.06 14.14 43.13 3.62
2197 7086 6.321821 ACATGGTGTATATACAACCAGGTT 57.678 37.500 29.06 20.56 43.13 3.50
2198 7087 5.968676 ACATGGTGTATATACAACCAGGT 57.031 39.130 29.06 29.06 43.13 4.00
2199 7088 7.639113 AAAACATGGTGTATATACAACCAGG 57.361 36.000 28.24 28.24 43.13 4.45
2266 7155 9.659830 GCGAAAGAAAGTCAAGTTTATTCTAAA 57.340 29.630 0.00 0.00 30.56 1.85
2267 7156 8.832521 TGCGAAAGAAAGTCAAGTTTATTCTAA 58.167 29.630 0.00 0.00 30.56 2.10
2268 7157 8.280497 GTGCGAAAGAAAGTCAAGTTTATTCTA 58.720 33.333 0.00 0.00 30.56 2.10
2269 7158 7.012421 AGTGCGAAAGAAAGTCAAGTTTATTCT 59.988 33.333 0.00 0.00 31.98 2.40
2270 7159 7.132863 AGTGCGAAAGAAAGTCAAGTTTATTC 58.867 34.615 0.00 0.00 0.00 1.75
2271 7160 7.027778 AGTGCGAAAGAAAGTCAAGTTTATT 57.972 32.000 0.00 0.00 0.00 1.40
2272 7161 6.619801 AGTGCGAAAGAAAGTCAAGTTTAT 57.380 33.333 0.00 0.00 0.00 1.40
2273 7162 6.759827 AGTAGTGCGAAAGAAAGTCAAGTTTA 59.240 34.615 0.00 0.00 0.00 2.01
2274 7163 4.965119 AGTGCGAAAGAAAGTCAAGTTT 57.035 36.364 0.00 0.00 0.00 2.66
2275 7164 5.116882 AGTAGTGCGAAAGAAAGTCAAGTT 58.883 37.500 0.00 0.00 0.00 2.66
2276 7165 4.694339 AGTAGTGCGAAAGAAAGTCAAGT 58.306 39.130 0.00 0.00 0.00 3.16
2277 7166 6.952935 ATAGTAGTGCGAAAGAAAGTCAAG 57.047 37.500 0.00 0.00 0.00 3.02
2278 7167 7.823665 TCTATAGTAGTGCGAAAGAAAGTCAA 58.176 34.615 0.00 0.00 0.00 3.18
2279 7168 7.387119 TCTATAGTAGTGCGAAAGAAAGTCA 57.613 36.000 0.00 0.00 0.00 3.41
2280 7169 8.684973 TTTCTATAGTAGTGCGAAAGAAAGTC 57.315 34.615 0.00 0.00 30.38 3.01
2281 7170 9.654663 AATTTCTATAGTAGTGCGAAAGAAAGT 57.345 29.630 0.00 0.00 35.61 2.66
2285 7174 9.647797 TGAAAATTTCTATAGTAGTGCGAAAGA 57.352 29.630 7.29 0.00 0.00 2.52
2288 7177 8.826710 CCATGAAAATTTCTATAGTAGTGCGAA 58.173 33.333 7.29 0.00 0.00 4.70
2289 7178 7.441157 CCCATGAAAATTTCTATAGTAGTGCGA 59.559 37.037 7.29 0.00 0.00 5.10
2290 7179 7.441157 TCCCATGAAAATTTCTATAGTAGTGCG 59.559 37.037 7.29 0.00 0.00 5.34
2291 7180 8.677148 TCCCATGAAAATTTCTATAGTAGTGC 57.323 34.615 7.29 0.00 0.00 4.40
2321 7210 5.546526 TGCCTTGAAGTCAACTTTGTTTTT 58.453 33.333 0.00 0.00 36.11 1.94
2322 7211 5.146010 TGCCTTGAAGTCAACTTTGTTTT 57.854 34.783 0.00 0.00 36.11 2.43
2323 7212 4.799564 TGCCTTGAAGTCAACTTTGTTT 57.200 36.364 0.00 0.00 36.11 2.83
2324 7213 4.799564 TTGCCTTGAAGTCAACTTTGTT 57.200 36.364 0.00 0.00 36.11 2.83
2325 7214 4.799564 TTTGCCTTGAAGTCAACTTTGT 57.200 36.364 0.00 0.00 36.11 2.83
2358 7247 9.959749 GTGTGAAAGTGACCTAAAATCAAATAA 57.040 29.630 0.00 0.00 0.00 1.40
2359 7248 9.349713 AGTGTGAAAGTGACCTAAAATCAAATA 57.650 29.630 0.00 0.00 0.00 1.40
2360 7249 8.237811 AGTGTGAAAGTGACCTAAAATCAAAT 57.762 30.769 0.00 0.00 0.00 2.32
2361 7250 7.639113 AGTGTGAAAGTGACCTAAAATCAAA 57.361 32.000 0.00 0.00 0.00 2.69
2362 7251 8.918202 ATAGTGTGAAAGTGACCTAAAATCAA 57.082 30.769 0.00 0.00 0.00 2.57
2363 7252 8.918202 AATAGTGTGAAAGTGACCTAAAATCA 57.082 30.769 0.00 0.00 0.00 2.57
2367 7256 8.780249 GCTAAAATAGTGTGAAAGTGACCTAAA 58.220 33.333 0.00 0.00 0.00 1.85
2368 7257 8.154856 AGCTAAAATAGTGTGAAAGTGACCTAA 58.845 33.333 0.00 0.00 0.00 2.69
2369 7258 7.676947 AGCTAAAATAGTGTGAAAGTGACCTA 58.323 34.615 0.00 0.00 0.00 3.08
2370 7259 6.534634 AGCTAAAATAGTGTGAAAGTGACCT 58.465 36.000 0.00 0.00 0.00 3.85
2371 7260 6.803154 AGCTAAAATAGTGTGAAAGTGACC 57.197 37.500 0.00 0.00 0.00 4.02
2407 7296 5.739959 CCCCCTTTGACTTCTTTTCAAAAA 58.260 37.500 0.00 0.00 41.32 1.94
2408 7297 5.351948 CCCCCTTTGACTTCTTTTCAAAA 57.648 39.130 0.00 0.00 41.32 2.44
2427 7316 4.431416 AATCCACAAAAAGAAAACCCCC 57.569 40.909 0.00 0.00 0.00 5.40
2428 7317 6.767524 AAAAATCCACAAAAAGAAAACCCC 57.232 33.333 0.00 0.00 0.00 4.95
2449 7338 7.057894 ACCTACCATTGTACTTGTGAGAAAAA 58.942 34.615 0.00 0.00 0.00 1.94
2450 7339 6.597562 ACCTACCATTGTACTTGTGAGAAAA 58.402 36.000 0.00 0.00 0.00 2.29
2451 7340 6.182507 ACCTACCATTGTACTTGTGAGAAA 57.817 37.500 0.00 0.00 0.00 2.52
2452 7341 5.305902 TGACCTACCATTGTACTTGTGAGAA 59.694 40.000 0.00 0.00 0.00 2.87
2453 7342 4.836175 TGACCTACCATTGTACTTGTGAGA 59.164 41.667 0.00 0.00 0.00 3.27
2454 7343 5.147330 TGACCTACCATTGTACTTGTGAG 57.853 43.478 0.00 0.00 0.00 3.51
2455 7344 5.071250 ACTTGACCTACCATTGTACTTGTGA 59.929 40.000 0.00 0.00 0.00 3.58
2456 7345 5.305585 ACTTGACCTACCATTGTACTTGTG 58.694 41.667 0.00 0.00 0.00 3.33
2457 7346 5.562298 ACTTGACCTACCATTGTACTTGT 57.438 39.130 0.00 0.00 0.00 3.16
2458 7347 6.877611 AAACTTGACCTACCATTGTACTTG 57.122 37.500 0.00 0.00 0.00 3.16
2459 7348 9.582648 AAATAAACTTGACCTACCATTGTACTT 57.417 29.630 0.00 0.00 0.00 2.24
2460 7349 9.227777 GAAATAAACTTGACCTACCATTGTACT 57.772 33.333 0.00 0.00 0.00 2.73
2461 7350 9.005777 TGAAATAAACTTGACCTACCATTGTAC 57.994 33.333 0.00 0.00 0.00 2.90
2462 7351 9.575868 TTGAAATAAACTTGACCTACCATTGTA 57.424 29.630 0.00 0.00 0.00 2.41
2463 7352 8.472007 TTGAAATAAACTTGACCTACCATTGT 57.528 30.769 0.00 0.00 0.00 2.71
2464 7353 9.757227 TTTTGAAATAAACTTGACCTACCATTG 57.243 29.630 0.00 0.00 0.00 2.82
2544 7433 5.290493 TGGTTCATGGGTGTATCTACATC 57.710 43.478 0.00 0.00 38.63 3.06
2545 7434 5.708736 TTGGTTCATGGGTGTATCTACAT 57.291 39.130 0.00 0.00 38.63 2.29
2546 7435 5.250200 GTTTGGTTCATGGGTGTATCTACA 58.750 41.667 0.00 0.00 0.00 2.74
2547 7436 4.331717 CGTTTGGTTCATGGGTGTATCTAC 59.668 45.833 0.00 0.00 0.00 2.59
2548 7437 4.020039 ACGTTTGGTTCATGGGTGTATCTA 60.020 41.667 0.00 0.00 0.00 1.98
2549 7438 3.244770 ACGTTTGGTTCATGGGTGTATCT 60.245 43.478 0.00 0.00 0.00 1.98
2550 7439 3.078837 ACGTTTGGTTCATGGGTGTATC 58.921 45.455 0.00 0.00 0.00 2.24
2551 7440 3.078837 GACGTTTGGTTCATGGGTGTAT 58.921 45.455 0.00 0.00 0.00 2.29
2552 7441 2.496111 GACGTTTGGTTCATGGGTGTA 58.504 47.619 0.00 0.00 0.00 2.90
2553 7442 1.314730 GACGTTTGGTTCATGGGTGT 58.685 50.000 0.00 0.00 0.00 4.16
2554 7443 0.596082 GGACGTTTGGTTCATGGGTG 59.404 55.000 0.00 0.00 0.00 4.61
2555 7444 0.887387 CGGACGTTTGGTTCATGGGT 60.887 55.000 0.00 0.00 0.00 4.51
2556 7445 0.887387 ACGGACGTTTGGTTCATGGG 60.887 55.000 0.00 0.00 0.00 4.00
2557 7446 0.237235 CACGGACGTTTGGTTCATGG 59.763 55.000 0.00 0.00 0.00 3.66
2558 7447 0.941542 ACACGGACGTTTGGTTCATG 59.058 50.000 0.00 0.00 0.00 3.07
2559 7448 1.223187 GACACGGACGTTTGGTTCAT 58.777 50.000 0.00 0.00 0.00 2.57
2560 7449 0.810823 GGACACGGACGTTTGGTTCA 60.811 55.000 0.00 0.00 0.00 3.18
2561 7450 0.531311 AGGACACGGACGTTTGGTTC 60.531 55.000 0.00 0.00 0.00 3.62
2562 7451 0.107557 AAGGACACGGACGTTTGGTT 60.108 50.000 0.00 0.00 0.00 3.67
2563 7452 0.531311 GAAGGACACGGACGTTTGGT 60.531 55.000 0.00 0.00 0.00 3.67
2564 7453 1.226030 GGAAGGACACGGACGTTTGG 61.226 60.000 0.00 0.00 0.00 3.28
2565 7454 1.554042 CGGAAGGACACGGACGTTTG 61.554 60.000 0.00 0.00 0.00 2.93
2566 7455 1.300388 CGGAAGGACACGGACGTTT 60.300 57.895 0.00 0.00 0.00 3.60
2567 7456 2.019897 AACGGAAGGACACGGACGTT 62.020 55.000 0.00 0.00 39.38 3.99
2568 7457 2.019897 AAACGGAAGGACACGGACGT 62.020 55.000 0.00 0.00 35.95 4.34
2569 7458 0.877213 AAAACGGAAGGACACGGACG 60.877 55.000 0.00 0.00 0.00 4.79
2570 7459 0.584876 CAAAACGGAAGGACACGGAC 59.415 55.000 0.00 0.00 0.00 4.79
2571 7460 1.161563 GCAAAACGGAAGGACACGGA 61.162 55.000 0.00 0.00 0.00 4.69
2572 7461 1.281656 GCAAAACGGAAGGACACGG 59.718 57.895 0.00 0.00 0.00 4.94
2573 7462 0.378962 TTGCAAAACGGAAGGACACG 59.621 50.000 0.00 0.00 0.00 4.49
2574 7463 1.133407 TGTTGCAAAACGGAAGGACAC 59.867 47.619 0.00 0.00 0.00 3.67
2575 7464 1.464734 TGTTGCAAAACGGAAGGACA 58.535 45.000 0.00 0.00 0.00 4.02
2576 7465 2.570442 TTGTTGCAAAACGGAAGGAC 57.430 45.000 0.00 0.00 0.00 3.85
2577 7466 3.810310 ATTTGTTGCAAAACGGAAGGA 57.190 38.095 0.00 0.00 0.00 3.36
2578 7467 5.522097 AGTTAATTTGTTGCAAAACGGAAGG 59.478 36.000 0.00 0.00 0.00 3.46
2583 7472 8.819152 ATTTTCAGTTAATTTGTTGCAAAACG 57.181 26.923 0.00 0.00 0.00 3.60
2980 8775 5.860941 AGTCATCAATCCACTACTACCAG 57.139 43.478 0.00 0.00 0.00 4.00
3258 9064 2.250924 TCAGATGACTGAGTGGCTTGA 58.749 47.619 0.00 0.00 46.55 3.02
3323 9151 2.227388 CTGGTCCTCACTCAAACAATGC 59.773 50.000 0.00 0.00 0.00 3.56
3410 9239 1.228459 GGCCCCCATACGAATTCCC 60.228 63.158 0.00 0.00 0.00 3.97
3427 9256 3.763097 TGTTAGGTACGTCGTGTATGG 57.237 47.619 8.47 0.00 35.02 2.74
3603 11761 1.067142 TGTCATGGCTAGTCGGTTGAC 60.067 52.381 14.52 14.52 45.86 3.18
3604 11762 1.204704 CTGTCATGGCTAGTCGGTTGA 59.795 52.381 0.00 0.00 0.00 3.18
3605 11763 1.066858 ACTGTCATGGCTAGTCGGTTG 60.067 52.381 0.00 0.00 0.00 3.77
3606 11764 1.066858 CACTGTCATGGCTAGTCGGTT 60.067 52.381 0.00 0.00 0.00 4.44
3607 11765 0.532573 CACTGTCATGGCTAGTCGGT 59.467 55.000 0.00 0.00 0.00 4.69
3608 11766 0.179100 CCACTGTCATGGCTAGTCGG 60.179 60.000 0.00 2.26 31.52 4.79
3609 11767 3.352447 CCACTGTCATGGCTAGTCG 57.648 57.895 0.00 0.00 31.52 4.18
3616 11774 1.741706 GTGAAGATGCCACTGTCATGG 59.258 52.381 0.00 0.00 43.26 3.66
3617 11775 1.741706 GGTGAAGATGCCACTGTCATG 59.258 52.381 0.00 0.00 35.05 3.07
3748 11929 3.199727 TGCATTGTAGCTTATCCTGTGGA 59.800 43.478 0.00 0.00 33.55 4.02
3753 11934 8.874744 AAATGATATGCATTGTAGCTTATCCT 57.125 30.769 3.54 6.60 46.25 3.24
3765 11946 8.041733 CGTCATACGCAGAAAATGATATGCATT 61.042 37.037 3.54 0.00 41.09 3.56
3793 11974 1.267806 CTTCCTGAAACATGCAACGCT 59.732 47.619 0.00 0.00 0.00 5.07
3796 11977 5.689383 TTAGACTTCCTGAAACATGCAAC 57.311 39.130 0.00 0.00 0.00 4.17
3815 11996 9.771140 ATATTGTAGGAGGTAGGGAGTAATTAG 57.229 37.037 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.