Multiple sequence alignment - TraesCS7A01G465200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G465200 chr7A 100.000 5356 0 0 1994 7349 661590247 661595602 0.000000e+00 9891.0
1 TraesCS7A01G465200 chr7A 100.000 1766 0 0 1 1766 661588254 661590019 0.000000e+00 3262.0
2 TraesCS7A01G465200 chr7A 100.000 161 0 0 7765 7925 661596018 661596178 1.670000e-76 298.0
3 TraesCS7A01G465200 chr7A 97.436 39 1 0 564 602 661588777 661588815 5.130000e-07 67.6
4 TraesCS7A01G465200 chr7A 97.436 39 1 0 524 562 661588817 661588855 5.130000e-07 67.6
5 TraesCS7A01G465200 chr4D 94.757 2327 110 9 3451 5768 502106493 502108816 0.000000e+00 3611.0
6 TraesCS7A01G465200 chr4D 93.817 2329 119 13 3453 5768 481889345 481887029 0.000000e+00 3480.0
7 TraesCS7A01G465200 chr4D 84.954 1296 154 26 5781 7048 329138410 329137128 0.000000e+00 1275.0
8 TraesCS7A01G465200 chr4D 82.876 765 98 19 994 1734 329140416 329139661 0.000000e+00 656.0
9 TraesCS7A01G465200 chr4D 83.754 357 43 8 2524 2871 329138968 329138618 2.760000e-84 324.0
10 TraesCS7A01G465200 chr4D 87.295 244 23 5 1994 2229 329139630 329139387 1.010000e-68 272.0
11 TraesCS7A01G465200 chr4D 93.750 112 7 0 2308 2419 329139363 329139252 1.370000e-37 169.0
12 TraesCS7A01G465200 chr5A 94.577 2342 108 11 3448 5776 619773056 619775391 0.000000e+00 3603.0
13 TraesCS7A01G465200 chr3D 94.423 2331 112 10 3459 5776 553935029 553937354 0.000000e+00 3568.0
14 TraesCS7A01G465200 chr1D 93.978 2358 122 16 3448 5792 430110820 430108470 0.000000e+00 3550.0
15 TraesCS7A01G465200 chr1D 93.758 2339 107 18 3453 5774 278100153 278102469 0.000000e+00 3474.0
16 TraesCS7A01G465200 chr1D 84.840 376 37 8 2879 3249 486824059 486823699 2.100000e-95 361.0
17 TraesCS7A01G465200 chr2A 93.841 2338 122 18 3454 5776 704736505 704738835 0.000000e+00 3500.0
18 TraesCS7A01G465200 chr6D 93.443 2364 123 17 3440 5777 449135707 449138064 0.000000e+00 3478.0
19 TraesCS7A01G465200 chr2D 93.589 2324 131 10 3452 5768 350068327 350066015 0.000000e+00 3450.0
20 TraesCS7A01G465200 chr7D 94.648 1532 38 12 5840 7338 572553692 572555212 0.000000e+00 2335.0
21 TraesCS7A01G465200 chr7D 92.049 1132 39 12 657 1755 572548590 572549703 0.000000e+00 1544.0
22 TraesCS7A01G465200 chr7D 93.993 566 25 7 1 562 572548032 572548592 0.000000e+00 848.0
23 TraesCS7A01G465200 chr7D 94.048 420 17 6 2002 2418 572549710 572550124 1.450000e-176 630.0
24 TraesCS7A01G465200 chr7D 87.281 456 41 10 2433 2877 572550308 572550757 9.180000e-139 505.0
25 TraesCS7A01G465200 chr7D 91.220 205 16 2 3248 3450 572550748 572550952 2.180000e-70 278.0
26 TraesCS7A01G465200 chr7D 94.545 165 5 1 7765 7925 572562151 572562315 1.320000e-62 252.0
27 TraesCS7A01G465200 chr7D 93.939 165 6 1 7765 7925 572556444 572556608 6.140000e-61 246.0
28 TraesCS7A01G465200 chr7D 93.939 165 6 1 7765 7925 572558346 572558510 6.140000e-61 246.0
29 TraesCS7A01G465200 chr7D 93.939 165 6 1 7765 7925 572560248 572560412 6.140000e-61 246.0
30 TraesCS7A01G465200 chr7D 95.455 154 3 2 7776 7925 572555502 572555655 7.950000e-60 243.0
31 TraesCS7A01G465200 chr7D 93.333 165 7 1 7765 7925 572557395 572557559 2.860000e-59 241.0
32 TraesCS7A01G465200 chr7D 93.333 165 7 1 7765 7925 572559296 572559460 2.860000e-59 241.0
33 TraesCS7A01G465200 chr7D 91.566 166 9 2 7765 7925 572561200 572561365 2.880000e-54 224.0
34 TraesCS7A01G465200 chr7D 97.561 41 1 0 564 604 572548554 572548594 3.970000e-08 71.3
35 TraesCS7A01G465200 chr7B 95.466 1213 42 7 5779 6982 629580894 629579686 0.000000e+00 1923.0
36 TraesCS7A01G465200 chr7B 92.938 793 28 11 973 1753 629582818 629582042 0.000000e+00 1129.0
37 TraesCS7A01G465200 chr7B 94.885 567 23 6 1 565 629583682 629583120 0.000000e+00 881.0
38 TraesCS7A01G465200 chr7B 92.910 268 14 3 2097 2364 629581589 629581327 1.250000e-102 385.0
39 TraesCS7A01G465200 chr7B 83.467 375 34 9 2876 3231 664400123 664400488 2.760000e-84 324.0
40 TraesCS7A01G465200 chr7B 85.266 319 37 8 2935 3246 744933521 744933836 3.570000e-83 320.0
41 TraesCS7A01G465200 chr7B 85.668 307 36 8 2935 3240 747003500 747003799 4.620000e-82 316.0
42 TraesCS7A01G465200 chr7B 82.000 400 37 11 2879 3251 610817538 610817147 2.780000e-79 307.0
43 TraesCS7A01G465200 chr7B 81.047 401 41 11 2879 3251 611152310 611151917 3.620000e-73 287.0
44 TraesCS7A01G465200 chr7B 91.707 205 14 3 657 860 629583125 629582923 1.680000e-71 281.0
45 TraesCS7A01G465200 chr7B 91.960 199 14 2 3254 3450 629581095 629580897 2.180000e-70 278.0
46 TraesCS7A01G465200 chr7B 88.261 230 20 6 2649 2877 629581315 629581092 1.310000e-67 268.0
47 TraesCS7A01G465200 chr7B 95.902 122 4 1 856 977 629582968 629582848 6.270000e-46 196.0
48 TraesCS7A01G465200 chr7B 91.250 80 5 1 2879 2956 714617230 714617151 3.020000e-19 108.0
49 TraesCS7A01G465200 chr4A 85.648 1296 144 28 5781 7048 140978526 140979807 0.000000e+00 1325.0
50 TraesCS7A01G465200 chr4A 81.324 680 100 15 994 1654 140976044 140976715 1.960000e-145 527.0
51 TraesCS7A01G465200 chr4A 87.269 432 45 9 5781 6206 253273789 253274216 1.200000e-132 484.0
52 TraesCS7A01G465200 chr4A 88.438 320 31 6 2934 3250 494621324 494621008 1.610000e-101 381.0
53 TraesCS7A01G465200 chr4A 84.119 403 32 7 2878 3249 211068418 211068819 2.100000e-95 361.0
54 TraesCS7A01G465200 chr4A 85.893 319 33 9 1994 2301 140977087 140977404 5.930000e-86 329.0
55 TraesCS7A01G465200 chr4A 93.711 159 8 2 2713 2870 140978159 140978316 3.700000e-58 237.0
56 TraesCS7A01G465200 chr4A 83.721 86 11 3 1651 1734 140976971 140977055 2.370000e-10 78.7
57 TraesCS7A01G465200 chr4B 85.050 1291 146 30 5789 7048 408980729 408979455 0.000000e+00 1271.0
58 TraesCS7A01G465200 chr4B 85.314 606 69 12 1139 1734 408984212 408983617 6.800000e-170 608.0
59 TraesCS7A01G465200 chr4B 83.427 356 44 9 2524 2870 408982954 408982605 4.620000e-82 316.0
60 TraesCS7A01G465200 chr4B 85.246 244 28 5 1994 2229 408983586 408983343 2.210000e-60 244.0
61 TraesCS7A01G465200 chr1B 84.645 1296 158 26 5781 7048 135816361 135817643 0.000000e+00 1253.0
62 TraesCS7A01G465200 chr1B 82.523 761 103 18 994 1734 135814327 135815077 6.700000e-180 641.0
63 TraesCS7A01G465200 chr1B 86.538 364 32 11 2062 2413 135815161 135815519 1.250000e-102 385.0
64 TraesCS7A01G465200 chr1B 81.087 460 59 13 2433 2870 135815697 135816150 7.620000e-90 342.0
65 TraesCS7A01G465200 chr1B 85.893 319 35 7 2935 3250 539141605 539141294 1.650000e-86 331.0
66 TraesCS7A01G465200 chr3A 87.306 386 28 6 2879 3248 746052720 746052340 9.510000e-114 422.0
67 TraesCS7A01G465200 chr3A 81.790 324 30 13 2935 3256 624750547 624750251 2.210000e-60 244.0
68 TraesCS7A01G465200 chrUn 85.146 377 32 8 2879 3239 33184572 33184940 1.630000e-96 364.0
69 TraesCS7A01G465200 chrUn 87.342 316 25 11 2937 3250 70364157 70363855 1.640000e-91 348.0
70 TraesCS7A01G465200 chr6B 83.721 387 39 13 2876 3250 102088021 102087647 2.120000e-90 344.0
71 TraesCS7A01G465200 chr3B 82.294 401 32 17 2879 3254 28572537 28572923 2.150000e-80 311.0
72 TraesCS7A01G465200 chr3B 79.494 395 49 19 2867 3253 819355890 819355520 1.320000e-62 252.0
73 TraesCS7A01G465200 chr2B 82.005 389 34 14 2875 3245 657085195 657085565 1.670000e-76 298.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G465200 chr7A 661588254 661596178 7924 False 2717.240000 9891 98.974400 1 7925 5 chr7A.!!$F1 7924
1 TraesCS7A01G465200 chr4D 502106493 502108816 2323 False 3611.000000 3611 94.757000 3451 5768 1 chr4D.!!$F1 2317
2 TraesCS7A01G465200 chr4D 481887029 481889345 2316 True 3480.000000 3480 93.817000 3453 5768 1 chr4D.!!$R1 2315
3 TraesCS7A01G465200 chr4D 329137128 329140416 3288 True 539.200000 1275 86.525800 994 7048 5 chr4D.!!$R2 6054
4 TraesCS7A01G465200 chr5A 619773056 619775391 2335 False 3603.000000 3603 94.577000 3448 5776 1 chr5A.!!$F1 2328
5 TraesCS7A01G465200 chr3D 553935029 553937354 2325 False 3568.000000 3568 94.423000 3459 5776 1 chr3D.!!$F1 2317
6 TraesCS7A01G465200 chr1D 430108470 430110820 2350 True 3550.000000 3550 93.978000 3448 5792 1 chr1D.!!$R1 2344
7 TraesCS7A01G465200 chr1D 278100153 278102469 2316 False 3474.000000 3474 93.758000 3453 5774 1 chr1D.!!$F1 2321
8 TraesCS7A01G465200 chr2A 704736505 704738835 2330 False 3500.000000 3500 93.841000 3454 5776 1 chr2A.!!$F1 2322
9 TraesCS7A01G465200 chr6D 449135707 449138064 2357 False 3478.000000 3478 93.443000 3440 5777 1 chr6D.!!$F1 2337
10 TraesCS7A01G465200 chr2D 350066015 350068327 2312 True 3450.000000 3450 93.589000 3452 5768 1 chr2D.!!$R1 2316
11 TraesCS7A01G465200 chr7D 572548032 572562315 14283 False 543.353333 2335 93.389933 1 7925 15 chr7D.!!$F1 7924
12 TraesCS7A01G465200 chr7B 629579686 629583682 3996 True 667.625000 1923 93.003625 1 6982 8 chr7B.!!$R4 6981
13 TraesCS7A01G465200 chr4A 140976044 140979807 3763 False 499.340000 1325 86.059400 994 7048 5 chr4A.!!$F3 6054
14 TraesCS7A01G465200 chr4B 408979455 408984212 4757 True 609.750000 1271 84.759250 1139 7048 4 chr4B.!!$R1 5909
15 TraesCS7A01G465200 chr1B 135814327 135817643 3316 False 655.250000 1253 83.698250 994 7048 4 chr1B.!!$F1 6054

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 439 0.036732 ATTGCTTCTGTTCCAGCCGA 59.963 50.000 0.0 0.0 34.91 5.54 F
1085 1131 0.616111 TCCTTCTCTCTCAGGCACCC 60.616 60.000 0.0 0.0 0.00 4.61 F
2543 3279 0.322187 TGCTTTAGGCTTTCCGTCCC 60.322 55.000 0.0 0.0 42.39 4.46 F
3244 4128 0.036306 CCGGGAGCTGTTACACCTTT 59.964 55.000 0.0 0.0 0.00 3.11 F
4005 4927 1.483415 GCCATTGTCAAATGCCTCCAT 59.517 47.619 0.0 0.0 41.66 3.41 F
5283 6240 0.768609 GGGGGAGGGCTGCTACTTAT 60.769 60.000 0.0 0.0 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1249 1326 1.899437 TAGAAGCAGGGCGTTGGAGG 61.899 60.0 0.00 0.00 0.00 4.30 R
2881 3765 0.609131 CCGGGTGCTGAAAATCCTGT 60.609 55.0 0.00 0.00 0.00 4.00 R
3444 4334 0.106619 ACCAAACACGCCCCAAGTAA 60.107 50.0 0.00 0.00 0.00 2.24 R
4066 4988 0.783206 TCCTCCATTGGGGCTTTGAA 59.217 50.0 2.09 0.00 36.21 2.69 R
5325 6283 0.450983 CCGTCTGGTCGACCTACTTC 59.549 60.0 33.39 17.91 39.56 3.01 R
6960 11725 1.255667 AAATGCTGCTGGGCTCTTGG 61.256 55.0 0.00 0.00 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
298 303 1.550976 ACCTCTGACTCGTCCCATTTC 59.449 52.381 0.00 0.00 0.00 2.17
353 358 1.673808 GCGACCAGGTAGGAATCCGT 61.674 60.000 1.37 0.00 41.22 4.69
414 419 1.528076 ATGGCAGTGGACAAACGCA 60.528 52.632 0.00 0.00 34.11 5.24
423 428 1.680735 TGGACAAACGCAATTGCTTCT 59.319 42.857 26.86 2.39 39.32 2.85
434 439 0.036732 ATTGCTTCTGTTCCAGCCGA 59.963 50.000 0.00 0.00 34.91 5.54
515 521 6.532657 GGATAAACTGGATGCTTGTGAATTTG 59.467 38.462 0.00 0.00 0.00 2.32
564 570 5.417754 TTGCTTGCAATGGATAAATTGGA 57.582 34.783 0.00 0.00 37.89 3.53
565 571 5.617528 TGCTTGCAATGGATAAATTGGAT 57.382 34.783 0.00 0.00 37.66 3.41
566 572 5.361427 TGCTTGCAATGGATAAATTGGATG 58.639 37.500 0.00 0.00 37.66 3.51
567 573 5.104859 TGCTTGCAATGGATAAATTGGATGT 60.105 36.000 0.00 0.00 37.66 3.06
568 574 6.097981 TGCTTGCAATGGATAAATTGGATGTA 59.902 34.615 0.00 0.00 37.66 2.29
569 575 7.156673 GCTTGCAATGGATAAATTGGATGTAT 58.843 34.615 0.00 0.00 37.66 2.29
570 576 7.117236 GCTTGCAATGGATAAATTGGATGTATG 59.883 37.037 0.00 0.00 37.66 2.39
571 577 6.995364 TGCAATGGATAAATTGGATGTATGG 58.005 36.000 0.00 0.00 37.89 2.74
572 578 5.870978 GCAATGGATAAATTGGATGTATGGC 59.129 40.000 0.00 0.00 37.89 4.40
573 579 6.518706 GCAATGGATAAATTGGATGTATGGCA 60.519 38.462 0.00 0.00 37.89 4.92
574 580 7.617225 CAATGGATAAATTGGATGTATGGCAT 58.383 34.615 4.88 4.88 41.24 4.40
575 581 8.751242 CAATGGATAAATTGGATGTATGGCATA 58.249 33.333 2.32 2.32 38.06 3.14
576 582 9.496710 AATGGATAAATTGGATGTATGGCATAT 57.503 29.630 10.92 0.00 38.06 1.78
577 583 8.898303 TGGATAAATTGGATGTATGGCATATT 57.102 30.769 10.92 1.46 38.06 1.28
578 584 9.324008 TGGATAAATTGGATGTATGGCATATTT 57.676 29.630 10.92 8.66 38.06 1.40
579 585 9.590451 GGATAAATTGGATGTATGGCATATTTG 57.410 33.333 10.92 0.00 38.06 2.32
604 610 5.548706 TTGCTTGCAATGGATAAATTTGC 57.451 34.783 0.00 0.00 44.59 3.68
610 616 5.548706 GCAATGGATAAATTTGCAAGCAA 57.451 34.783 2.89 2.89 43.95 3.91
611 617 6.126568 GCAATGGATAAATTTGCAAGCAAT 57.873 33.333 8.46 0.00 43.95 3.56
612 618 5.968848 GCAATGGATAAATTTGCAAGCAATG 59.031 36.000 8.46 1.27 43.95 2.82
633 639 4.250570 GCAAATATGCGATACATCTCCG 57.749 45.455 0.00 0.00 43.83 4.63
634 640 3.926527 GCAAATATGCGATACATCTCCGA 59.073 43.478 0.00 0.00 43.83 4.55
635 641 4.388773 GCAAATATGCGATACATCTCCGAA 59.611 41.667 0.00 0.00 43.83 4.30
636 642 5.107104 GCAAATATGCGATACATCTCCGAAA 60.107 40.000 0.00 0.00 43.83 3.46
637 643 6.402550 GCAAATATGCGATACATCTCCGAAAT 60.403 38.462 0.00 0.00 43.83 2.17
638 644 7.201522 GCAAATATGCGATACATCTCCGAAATA 60.202 37.037 0.00 0.00 43.83 1.40
639 645 8.655970 CAAATATGCGATACATCTCCGAAATAA 58.344 33.333 0.00 0.00 40.38 1.40
640 646 8.771920 AATATGCGATACATCTCCGAAATAAA 57.228 30.769 0.00 0.00 40.38 1.40
641 647 8.948631 ATATGCGATACATCTCCGAAATAAAT 57.051 30.769 0.00 0.00 40.38 1.40
642 648 7.672983 ATGCGATACATCTCCGAAATAAATT 57.327 32.000 0.00 0.00 31.52 1.82
643 649 6.887368 TGCGATACATCTCCGAAATAAATTG 58.113 36.000 0.00 0.00 0.00 2.32
644 650 6.073276 TGCGATACATCTCCGAAATAAATTGG 60.073 38.462 0.00 0.00 0.00 3.16
645 651 6.147164 GCGATACATCTCCGAAATAAATTGGA 59.853 38.462 0.00 0.00 0.00 3.53
646 652 7.148407 GCGATACATCTCCGAAATAAATTGGAT 60.148 37.037 0.00 0.00 0.00 3.41
647 653 8.171196 CGATACATCTCCGAAATAAATTGGATG 58.829 37.037 0.00 0.00 36.43 3.51
648 654 8.924511 ATACATCTCCGAAATAAATTGGATGT 57.075 30.769 0.00 0.00 42.94 3.06
650 656 8.924511 ACATCTCCGAAATAAATTGGATGTAT 57.075 30.769 0.00 0.00 40.08 2.29
651 657 9.354673 ACATCTCCGAAATAAATTGGATGTATT 57.645 29.630 0.00 0.00 40.08 1.89
652 658 9.616634 CATCTCCGAAATAAATTGGATGTATTG 57.383 33.333 0.00 0.00 0.00 1.90
653 659 7.648142 TCTCCGAAATAAATTGGATGTATTGC 58.352 34.615 0.00 0.00 0.00 3.56
654 660 7.284261 TCTCCGAAATAAATTGGATGTATTGCA 59.716 33.333 0.00 0.00 0.00 4.08
655 661 7.950512 TCCGAAATAAATTGGATGTATTGCAT 58.049 30.769 0.00 0.00 41.24 3.96
656 662 9.072375 TCCGAAATAAATTGGATGTATTGCATA 57.928 29.630 0.00 0.00 38.06 3.14
657 663 9.859427 CCGAAATAAATTGGATGTATTGCATAT 57.141 29.630 0.00 0.00 38.06 1.78
683 689 4.701651 CAGGAAGATAAGTGCACAATGGAA 59.298 41.667 21.04 0.00 0.00 3.53
758 765 2.938451 ACCATTGATCATACGCTGTGTG 59.062 45.455 3.71 0.38 0.00 3.82
775 782 6.419413 CGCTGTGTGGTTTGTTTATTTGTTAT 59.581 34.615 0.00 0.00 0.00 1.89
776 783 7.591795 CGCTGTGTGGTTTGTTTATTTGTTATA 59.408 33.333 0.00 0.00 0.00 0.98
1080 1126 2.422127 GTCGTCTTCCTTCTCTCTCAGG 59.578 54.545 0.00 0.00 0.00 3.86
1081 1127 1.134175 CGTCTTCCTTCTCTCTCAGGC 59.866 57.143 0.00 0.00 0.00 4.85
1082 1128 2.175202 GTCTTCCTTCTCTCTCAGGCA 58.825 52.381 0.00 0.00 0.00 4.75
1083 1129 2.094234 GTCTTCCTTCTCTCTCAGGCAC 60.094 54.545 0.00 0.00 0.00 5.01
1084 1130 1.206849 CTTCCTTCTCTCTCAGGCACC 59.793 57.143 0.00 0.00 0.00 5.01
1085 1131 0.616111 TCCTTCTCTCTCAGGCACCC 60.616 60.000 0.00 0.00 0.00 4.61
1086 1132 1.621672 CCTTCTCTCTCAGGCACCCC 61.622 65.000 0.00 0.00 0.00 4.95
1087 1133 1.613630 TTCTCTCTCAGGCACCCCC 60.614 63.158 0.00 0.00 0.00 5.40
1088 1134 3.465403 CTCTCTCAGGCACCCCCG 61.465 72.222 0.00 0.00 39.21 5.73
1249 1326 1.475682 CCGGTACTTGTACTGTCCTCC 59.524 57.143 15.86 0.00 0.00 4.30
1257 1336 0.531200 GTACTGTCCTCCCTCCAACG 59.469 60.000 0.00 0.00 0.00 4.10
1408 1495 4.853468 TTCCTGAGGTATAATTGTGCCA 57.147 40.909 11.72 0.00 0.00 4.92
1478 1565 5.751586 TGGGTTTTGATAGTGGTAATCTCC 58.248 41.667 0.00 0.00 0.00 3.71
1530 1618 4.630111 CAGCTCATCTTCTGAAGTATCCC 58.370 47.826 16.43 5.03 32.14 3.85
1623 1711 2.625790 GGCAGAGGTATCTCATCGTTCT 59.374 50.000 5.64 0.00 42.34 3.01
1667 2015 5.790593 CTGTGTTACTTTAGACCTTGGCTA 58.209 41.667 0.00 0.00 0.00 3.93
1669 2017 5.993441 TGTGTTACTTTAGACCTTGGCTAAC 59.007 40.000 0.00 0.00 32.30 2.34
1683 2031 2.838202 TGGCTAACCTCAGGAAGTAAGG 59.162 50.000 0.00 0.00 36.63 2.69
1684 2032 2.170817 GGCTAACCTCAGGAAGTAAGGG 59.829 54.545 0.00 0.00 34.31 3.95
1688 2036 4.642466 AACCTCAGGAAGTAAGGGAAAG 57.358 45.455 0.00 0.00 34.31 2.62
1689 2037 3.870559 ACCTCAGGAAGTAAGGGAAAGA 58.129 45.455 0.00 0.00 34.31 2.52
1735 2088 4.704057 TGTTTGTAGATGTAATGCATGGCA 59.296 37.500 0.00 2.54 44.86 4.92
2144 2606 8.095792 TGTTCTTTGACGGGTCTACATATAAAA 58.904 33.333 0.00 0.00 0.00 1.52
2222 2684 6.280855 ACAAGGTGAAAAGGTAATATTGCC 57.719 37.500 14.27 14.27 0.00 4.52
2230 2692 3.753294 AGGTAATATTGCCTCTCACCG 57.247 47.619 18.49 0.00 39.16 4.94
2232 2694 2.224305 GGTAATATTGCCTCTCACCGCT 60.224 50.000 14.77 0.00 0.00 5.52
2257 2729 6.540438 TCTTAAATGGATGACTTCGTAGGT 57.460 37.500 0.00 0.00 0.00 3.08
2424 2973 9.499479 CATATTCTTATGAAAGGTAGTCATGCT 57.501 33.333 0.00 0.00 37.94 3.79
2425 2974 7.798596 ATTCTTATGAAAGGTAGTCATGCTG 57.201 36.000 0.00 0.00 36.41 4.41
2428 2977 6.382859 TCTTATGAAAGGTAGTCATGCTGGTA 59.617 38.462 0.00 0.00 36.41 3.25
2429 2978 4.901197 TGAAAGGTAGTCATGCTGGTAA 57.099 40.909 0.00 0.00 0.00 2.85
2497 3220 3.834489 ACATCTACTGGCATCTGAAGG 57.166 47.619 0.00 0.00 0.00 3.46
2499 3222 3.133721 ACATCTACTGGCATCTGAAGGTC 59.866 47.826 0.00 0.00 0.00 3.85
2513 3236 5.794894 TCTGAAGGTCTGGTCATTTAGTTC 58.205 41.667 0.00 0.00 0.00 3.01
2516 3239 5.071788 TGAAGGTCTGGTCATTTAGTTCTGT 59.928 40.000 0.00 0.00 0.00 3.41
2517 3240 5.568620 AGGTCTGGTCATTTAGTTCTGTT 57.431 39.130 0.00 0.00 0.00 3.16
2519 3242 5.998363 AGGTCTGGTCATTTAGTTCTGTTTC 59.002 40.000 0.00 0.00 0.00 2.78
2522 3258 7.355778 GTCTGGTCATTTAGTTCTGTTTCTTG 58.644 38.462 0.00 0.00 0.00 3.02
2538 3274 5.164233 GTTTCTTGATGCTTTAGGCTTTCC 58.836 41.667 0.00 0.00 42.39 3.13
2542 3278 1.671328 GATGCTTTAGGCTTTCCGTCC 59.329 52.381 0.00 0.00 42.39 4.79
2543 3279 0.322187 TGCTTTAGGCTTTCCGTCCC 60.322 55.000 0.00 0.00 42.39 4.46
2571 3307 4.849813 TCCACAATCTCATGATGGACTT 57.150 40.909 10.35 0.00 32.44 3.01
2573 3309 6.312141 TCCACAATCTCATGATGGACTTAA 57.688 37.500 10.35 0.00 32.44 1.85
2590 3330 8.810990 TGGACTTAAACTTTTCTTTTACTGGA 57.189 30.769 0.00 0.00 0.00 3.86
2628 3506 5.588246 TGTGTGACTTTTGATTTCTACAGCA 59.412 36.000 0.00 0.00 0.00 4.41
2784 3668 4.058817 CAACCTACTATTCGGATCTTGGC 58.941 47.826 0.00 0.00 0.00 4.52
2820 3704 6.162079 CGATATATTTGTCTCTGATGGTGCT 58.838 40.000 0.00 0.00 0.00 4.40
2862 3746 2.290577 ACAGGTTCAGAATGCCTCTTCC 60.291 50.000 0.00 0.00 34.76 3.46
2883 3767 4.276058 CCCCCTTTTACTTTACGAGACA 57.724 45.455 0.00 0.00 0.00 3.41
2884 3768 4.251268 CCCCCTTTTACTTTACGAGACAG 58.749 47.826 0.00 0.00 0.00 3.51
2885 3769 4.251268 CCCCTTTTACTTTACGAGACAGG 58.749 47.826 0.00 0.00 0.00 4.00
2886 3770 4.020839 CCCCTTTTACTTTACGAGACAGGA 60.021 45.833 0.00 0.00 0.00 3.86
2887 3771 5.338137 CCCCTTTTACTTTACGAGACAGGAT 60.338 44.000 0.00 0.00 0.00 3.24
2888 3772 6.171213 CCCTTTTACTTTACGAGACAGGATT 58.829 40.000 0.00 0.00 0.00 3.01
2889 3773 6.653740 CCCTTTTACTTTACGAGACAGGATTT 59.346 38.462 0.00 0.00 0.00 2.17
2890 3774 7.174426 CCCTTTTACTTTACGAGACAGGATTTT 59.826 37.037 0.00 0.00 0.00 1.82
2891 3775 8.228464 CCTTTTACTTTACGAGACAGGATTTTC 58.772 37.037 0.00 0.00 0.00 2.29
2892 3776 8.665643 TTTTACTTTACGAGACAGGATTTTCA 57.334 30.769 0.00 0.00 0.00 2.69
2893 3777 7.884816 TTACTTTACGAGACAGGATTTTCAG 57.115 36.000 0.00 0.00 0.00 3.02
2894 3778 4.691216 ACTTTACGAGACAGGATTTTCAGC 59.309 41.667 0.00 0.00 0.00 4.26
2895 3779 2.839486 ACGAGACAGGATTTTCAGCA 57.161 45.000 0.00 0.00 0.00 4.41
2896 3780 2.417719 ACGAGACAGGATTTTCAGCAC 58.582 47.619 0.00 0.00 0.00 4.40
2897 3781 1.734465 CGAGACAGGATTTTCAGCACC 59.266 52.381 0.00 0.00 0.00 5.01
2898 3782 2.087646 GAGACAGGATTTTCAGCACCC 58.912 52.381 0.00 0.00 0.00 4.61
2899 3783 0.804989 GACAGGATTTTCAGCACCCG 59.195 55.000 0.00 0.00 0.00 5.28
2900 3784 0.609131 ACAGGATTTTCAGCACCCGG 60.609 55.000 0.00 0.00 0.00 5.73
2901 3785 1.000896 AGGATTTTCAGCACCCGGG 60.001 57.895 22.25 22.25 0.00 5.73
2902 3786 1.304134 GGATTTTCAGCACCCGGGT 60.304 57.895 24.16 24.16 0.00 5.28
2911 3795 3.653078 CACCCGGGTGCCCCTAAA 61.653 66.667 39.44 0.00 42.67 1.85
2912 3796 3.654143 ACCCGGGTGCCCCTAAAC 61.654 66.667 29.69 0.00 42.67 2.01
2913 3797 4.435970 CCCGGGTGCCCCTAAACC 62.436 72.222 14.18 0.00 42.67 3.27
2917 3801 3.836617 GGTGCCCCTAAACCCTCT 58.163 61.111 0.00 0.00 0.00 3.69
2918 3802 3.016745 GGTGCCCCTAAACCCTCTA 57.983 57.895 0.00 0.00 0.00 2.43
2919 3803 1.519498 GGTGCCCCTAAACCCTCTAT 58.481 55.000 0.00 0.00 0.00 1.98
2920 3804 1.143073 GGTGCCCCTAAACCCTCTATG 59.857 57.143 0.00 0.00 0.00 2.23
2921 3805 2.124411 GTGCCCCTAAACCCTCTATGA 58.876 52.381 0.00 0.00 0.00 2.15
2922 3806 2.508300 GTGCCCCTAAACCCTCTATGAA 59.492 50.000 0.00 0.00 0.00 2.57
2923 3807 2.508300 TGCCCCTAAACCCTCTATGAAC 59.492 50.000 0.00 0.00 0.00 3.18
2924 3808 2.508300 GCCCCTAAACCCTCTATGAACA 59.492 50.000 0.00 0.00 0.00 3.18
2925 3809 3.433740 GCCCCTAAACCCTCTATGAACAG 60.434 52.174 0.00 0.00 0.00 3.16
2926 3810 3.780850 CCCCTAAACCCTCTATGAACAGT 59.219 47.826 0.00 0.00 0.00 3.55
2927 3811 4.384208 CCCCTAAACCCTCTATGAACAGTG 60.384 50.000 0.00 0.00 0.00 3.66
2928 3812 4.469945 CCCTAAACCCTCTATGAACAGTGA 59.530 45.833 0.00 0.00 0.00 3.41
2929 3813 5.045869 CCCTAAACCCTCTATGAACAGTGAA 60.046 44.000 0.00 0.00 0.00 3.18
2930 3814 6.353082 CCCTAAACCCTCTATGAACAGTGAAT 60.353 42.308 0.00 0.00 0.00 2.57
2931 3815 7.112779 CCTAAACCCTCTATGAACAGTGAATT 58.887 38.462 0.00 0.00 0.00 2.17
2932 3816 7.611855 CCTAAACCCTCTATGAACAGTGAATTT 59.388 37.037 0.00 0.00 0.00 1.82
2933 3817 7.839680 AAACCCTCTATGAACAGTGAATTTT 57.160 32.000 0.00 0.00 0.00 1.82
2934 3818 8.934023 AAACCCTCTATGAACAGTGAATTTTA 57.066 30.769 0.00 0.00 0.00 1.52
2935 3819 8.934023 AACCCTCTATGAACAGTGAATTTTAA 57.066 30.769 0.00 0.00 0.00 1.52
2936 3820 8.934023 ACCCTCTATGAACAGTGAATTTTAAA 57.066 30.769 0.00 0.00 0.00 1.52
2937 3821 9.362151 ACCCTCTATGAACAGTGAATTTTAAAA 57.638 29.630 2.51 2.51 0.00 1.52
2962 3846 9.460019 AAAAATCTGAAACTTTGGGAAATCAAA 57.540 25.926 0.00 0.00 35.60 2.69
2963 3847 8.437360 AAATCTGAAACTTTGGGAAATCAAAC 57.563 30.769 0.00 0.00 33.62 2.93
2964 3848 6.790232 TCTGAAACTTTGGGAAATCAAACT 57.210 33.333 0.00 0.00 33.62 2.66
2965 3849 7.181569 TCTGAAACTTTGGGAAATCAAACTT 57.818 32.000 0.00 0.00 33.62 2.66
2966 3850 7.041107 TCTGAAACTTTGGGAAATCAAACTTG 58.959 34.615 0.00 0.00 33.62 3.16
2967 3851 6.940739 TGAAACTTTGGGAAATCAAACTTGA 58.059 32.000 0.00 0.00 42.14 3.02
2969 3853 7.710475 TGAAACTTTGGGAAATCAAACTTGATC 59.290 33.333 5.44 0.00 46.60 2.92
2970 3854 6.729690 ACTTTGGGAAATCAAACTTGATCA 57.270 33.333 5.44 0.00 46.60 2.92
2971 3855 7.123355 ACTTTGGGAAATCAAACTTGATCAA 57.877 32.000 8.12 8.12 46.60 2.57
2972 3856 7.563906 ACTTTGGGAAATCAAACTTGATCAAA 58.436 30.769 9.88 9.92 46.60 2.69
2973 3857 7.712205 ACTTTGGGAAATCAAACTTGATCAAAG 59.288 33.333 24.92 24.92 46.99 2.77
2992 3876 7.703298 TCAAAGTTTTGATGATCTTGCAAAG 57.297 32.000 0.00 0.00 42.95 2.77
2993 3877 7.267128 TCAAAGTTTTGATGATCTTGCAAAGT 58.733 30.769 0.00 0.00 42.53 2.66
2994 3878 7.765360 TCAAAGTTTTGATGATCTTGCAAAGTT 59.235 29.630 0.00 0.00 42.53 2.66
2995 3879 8.392612 CAAAGTTTTGATGATCTTGCAAAGTTT 58.607 29.630 0.00 2.52 41.91 2.66
2996 3880 8.496707 AAGTTTTGATGATCTTGCAAAGTTTT 57.503 26.923 0.00 0.00 46.34 2.43
2997 3881 9.598517 AAGTTTTGATGATCTTGCAAAGTTTTA 57.401 25.926 0.00 0.00 46.34 1.52
2998 3882 9.252962 AGTTTTGATGATCTTGCAAAGTTTTAG 57.747 29.630 0.00 0.00 46.34 1.85
2999 3883 7.642071 TTTGATGATCTTGCAAAGTTTTAGC 57.358 32.000 0.00 0.00 46.34 3.09
3000 3884 6.579666 TGATGATCTTGCAAAGTTTTAGCT 57.420 33.333 0.00 0.00 46.34 3.32
3001 3885 7.686438 TGATGATCTTGCAAAGTTTTAGCTA 57.314 32.000 0.00 0.00 46.34 3.32
3002 3886 8.109705 TGATGATCTTGCAAAGTTTTAGCTAA 57.890 30.769 0.86 0.86 46.34 3.09
3003 3887 8.575589 TGATGATCTTGCAAAGTTTTAGCTAAA 58.424 29.630 14.96 14.96 46.34 1.85
3004 3888 9.410556 GATGATCTTGCAAAGTTTTAGCTAAAA 57.589 29.630 24.42 24.42 46.34 1.52
3005 3889 9.762933 ATGATCTTGCAAAGTTTTAGCTAAAAA 57.237 25.926 28.54 12.79 46.34 1.94
3006 3890 9.762933 TGATCTTGCAAAGTTTTAGCTAAAAAT 57.237 25.926 28.54 25.54 46.34 1.82
3020 3904 6.364945 AGCTAAAAATAACATTCGAGGAGC 57.635 37.500 0.00 0.00 0.00 4.70
3021 3905 5.297029 AGCTAAAAATAACATTCGAGGAGCC 59.703 40.000 0.00 0.00 0.00 4.70
3022 3906 4.983671 AAAAATAACATTCGAGGAGCCC 57.016 40.909 0.00 0.00 0.00 5.19
3023 3907 3.933861 AAATAACATTCGAGGAGCCCT 57.066 42.857 0.00 0.00 36.03 5.19
3024 3908 3.477210 AATAACATTCGAGGAGCCCTC 57.523 47.619 10.35 10.35 46.44 4.30
3036 3920 4.505324 AGGAGCCCTCACCTAAAATAAC 57.495 45.455 0.00 0.00 34.47 1.89
3037 3921 3.850173 AGGAGCCCTCACCTAAAATAACA 59.150 43.478 0.00 0.00 34.47 2.41
3038 3922 4.291249 AGGAGCCCTCACCTAAAATAACAA 59.709 41.667 0.00 0.00 34.47 2.83
3039 3923 5.014202 GGAGCCCTCACCTAAAATAACAAA 58.986 41.667 0.00 0.00 0.00 2.83
3040 3924 5.479027 GGAGCCCTCACCTAAAATAACAAAA 59.521 40.000 0.00 0.00 0.00 2.44
3041 3925 6.340962 AGCCCTCACCTAAAATAACAAAAC 57.659 37.500 0.00 0.00 0.00 2.43
3042 3926 5.245301 AGCCCTCACCTAAAATAACAAAACC 59.755 40.000 0.00 0.00 0.00 3.27
3043 3927 5.011227 GCCCTCACCTAAAATAACAAAACCA 59.989 40.000 0.00 0.00 0.00 3.67
3044 3928 6.452242 CCCTCACCTAAAATAACAAAACCAC 58.548 40.000 0.00 0.00 0.00 4.16
3045 3929 6.266786 CCCTCACCTAAAATAACAAAACCACT 59.733 38.462 0.00 0.00 0.00 4.00
3046 3930 7.145323 CCTCACCTAAAATAACAAAACCACTG 58.855 38.462 0.00 0.00 0.00 3.66
3047 3931 7.201875 CCTCACCTAAAATAACAAAACCACTGT 60.202 37.037 0.00 0.00 0.00 3.55
3048 3932 8.068892 TCACCTAAAATAACAAAACCACTGTT 57.931 30.769 0.00 0.00 40.13 3.16
3049 3933 8.192110 TCACCTAAAATAACAAAACCACTGTTC 58.808 33.333 0.00 0.00 38.05 3.18
3050 3934 7.976734 CACCTAAAATAACAAAACCACTGTTCA 59.023 33.333 0.00 0.00 38.05 3.18
3051 3935 8.532819 ACCTAAAATAACAAAACCACTGTTCAA 58.467 29.630 0.00 0.00 38.05 2.69
3052 3936 9.372369 CCTAAAATAACAAAACCACTGTTCAAA 57.628 29.630 0.00 0.00 38.05 2.69
3054 3938 8.840833 AAAATAACAAAACCACTGTTCAAAGT 57.159 26.923 0.00 0.00 38.05 2.66
3055 3939 8.840833 AAATAACAAAACCACTGTTCAAAGTT 57.159 26.923 0.00 0.00 38.05 2.66
3056 3940 8.840833 AATAACAAAACCACTGTTCAAAGTTT 57.159 26.923 0.00 0.00 38.05 2.66
3057 3941 9.930693 AATAACAAAACCACTGTTCAAAGTTTA 57.069 25.926 0.00 0.00 38.05 2.01
3059 3943 7.826260 ACAAAACCACTGTTCAAAGTTTATG 57.174 32.000 0.00 0.00 32.15 1.90
3060 3944 7.382898 ACAAAACCACTGTTCAAAGTTTATGT 58.617 30.769 0.00 0.00 32.15 2.29
3061 3945 8.524487 ACAAAACCACTGTTCAAAGTTTATGTA 58.476 29.630 0.00 0.00 32.15 2.29
3062 3946 8.803799 CAAAACCACTGTTCAAAGTTTATGTAC 58.196 33.333 0.00 0.00 32.15 2.90
3063 3947 7.633193 AACCACTGTTCAAAGTTTATGTACA 57.367 32.000 0.00 0.00 0.00 2.90
3064 3948 7.817418 ACCACTGTTCAAAGTTTATGTACAT 57.183 32.000 13.93 13.93 29.51 2.29
3065 3949 8.232913 ACCACTGTTCAAAGTTTATGTACATT 57.767 30.769 14.77 0.00 29.51 2.71
3066 3950 8.691797 ACCACTGTTCAAAGTTTATGTACATTT 58.308 29.630 14.77 0.00 29.51 2.32
3067 3951 9.528018 CCACTGTTCAAAGTTTATGTACATTTT 57.472 29.630 14.77 5.55 29.51 1.82
3103 3987 3.015516 TTTTTGGTGAGGGCTCGAC 57.984 52.632 0.00 0.00 0.00 4.20
3104 3988 0.882927 TTTTTGGTGAGGGCTCGACG 60.883 55.000 0.00 0.00 0.00 5.12
3105 3989 1.750341 TTTTGGTGAGGGCTCGACGA 61.750 55.000 0.00 0.00 0.00 4.20
3106 3990 1.750341 TTTGGTGAGGGCTCGACGAA 61.750 55.000 0.00 0.00 0.00 3.85
3107 3991 2.154798 TTGGTGAGGGCTCGACGAAG 62.155 60.000 0.00 0.00 0.00 3.79
3108 3992 2.182030 GTGAGGGCTCGACGAAGG 59.818 66.667 0.00 0.00 0.00 3.46
3109 3993 2.282958 TGAGGGCTCGACGAAGGT 60.283 61.111 0.00 0.00 0.00 3.50
3110 3994 1.906824 TGAGGGCTCGACGAAGGTT 60.907 57.895 0.00 0.00 0.00 3.50
3111 3995 0.609957 TGAGGGCTCGACGAAGGTTA 60.610 55.000 0.00 0.00 0.00 2.85
3112 3996 0.745468 GAGGGCTCGACGAAGGTTAT 59.255 55.000 0.00 0.00 0.00 1.89
3113 3997 1.136500 GAGGGCTCGACGAAGGTTATT 59.864 52.381 0.00 0.00 0.00 1.40
3114 3998 1.553704 AGGGCTCGACGAAGGTTATTT 59.446 47.619 0.00 0.00 0.00 1.40
3115 3999 1.931841 GGGCTCGACGAAGGTTATTTC 59.068 52.381 0.00 0.00 0.00 2.17
3137 4021 7.830940 TTCGTACTGAAACTTTGTAAGAACA 57.169 32.000 0.00 0.00 32.72 3.18
3138 4022 8.428186 TTCGTACTGAAACTTTGTAAGAACAT 57.572 30.769 0.00 0.00 32.72 2.71
3139 4023 9.531942 TTCGTACTGAAACTTTGTAAGAACATA 57.468 29.630 0.00 0.00 32.72 2.29
3140 4024 9.531942 TCGTACTGAAACTTTGTAAGAACATAA 57.468 29.630 0.00 0.00 34.97 1.90
3153 4037 9.753674 TTGTAAGAACATAAATCTTTGATCCCT 57.246 29.630 0.00 0.00 38.13 4.20
3154 4038 9.177608 TGTAAGAACATAAATCTTTGATCCCTG 57.822 33.333 0.00 0.00 38.13 4.45
3155 4039 9.396022 GTAAGAACATAAATCTTTGATCCCTGA 57.604 33.333 0.00 0.00 38.13 3.86
3156 4040 8.884124 AAGAACATAAATCTTTGATCCCTGAA 57.116 30.769 0.00 0.00 33.41 3.02
3157 4041 8.884124 AGAACATAAATCTTTGATCCCTGAAA 57.116 30.769 0.00 0.00 0.00 2.69
3158 4042 8.964772 AGAACATAAATCTTTGATCCCTGAAAG 58.035 33.333 0.00 0.00 0.00 2.62
3159 4043 8.655935 AACATAAATCTTTGATCCCTGAAAGT 57.344 30.769 3.88 0.00 32.11 2.66
3160 4044 8.655935 ACATAAATCTTTGATCCCTGAAAGTT 57.344 30.769 3.88 0.00 32.11 2.66
3161 4045 9.093458 ACATAAATCTTTGATCCCTGAAAGTTT 57.907 29.630 3.88 0.00 32.11 2.66
3162 4046 9.578439 CATAAATCTTTGATCCCTGAAAGTTTC 57.422 33.333 8.75 8.75 32.11 2.78
3163 4047 7.601705 AAATCTTTGATCCCTGAAAGTTTCA 57.398 32.000 17.16 17.16 38.17 2.69
3216 4100 7.722949 ATGAATTTATTGTTCATGAGGGTGT 57.277 32.000 0.00 0.00 42.87 4.16
3217 4101 8.821686 ATGAATTTATTGTTCATGAGGGTGTA 57.178 30.769 0.00 0.00 42.87 2.90
3218 4102 8.279970 TGAATTTATTGTTCATGAGGGTGTAG 57.720 34.615 0.00 0.00 31.07 2.74
3219 4103 7.339212 TGAATTTATTGTTCATGAGGGTGTAGG 59.661 37.037 0.00 0.00 31.07 3.18
3220 4104 3.652057 ATTGTTCATGAGGGTGTAGGG 57.348 47.619 0.00 0.00 0.00 3.53
3221 4105 1.285280 TGTTCATGAGGGTGTAGGGG 58.715 55.000 0.00 0.00 0.00 4.79
3222 4106 0.107165 GTTCATGAGGGTGTAGGGGC 60.107 60.000 0.00 0.00 0.00 5.80
3223 4107 0.548926 TTCATGAGGGTGTAGGGGCA 60.549 55.000 0.00 0.00 0.00 5.36
3224 4108 1.224592 CATGAGGGTGTAGGGGCAC 59.775 63.158 0.00 0.00 38.56 5.01
3237 4121 3.712907 GGCACCCGGGAGCTGTTA 61.713 66.667 36.82 0.00 32.43 2.41
3238 4122 2.436115 GCACCCGGGAGCTGTTAC 60.436 66.667 32.83 5.42 0.00 2.50
3239 4123 3.065306 CACCCGGGAGCTGTTACA 58.935 61.111 32.02 0.00 0.00 2.41
3240 4124 1.375523 CACCCGGGAGCTGTTACAC 60.376 63.158 32.02 0.00 0.00 2.90
3241 4125 2.267961 CCCGGGAGCTGTTACACC 59.732 66.667 18.48 0.00 0.00 4.16
3242 4126 2.291043 CCCGGGAGCTGTTACACCT 61.291 63.158 18.48 0.00 0.00 4.00
3243 4127 1.677552 CCGGGAGCTGTTACACCTT 59.322 57.895 0.00 0.00 0.00 3.50
3244 4128 0.036306 CCGGGAGCTGTTACACCTTT 59.964 55.000 0.00 0.00 0.00 3.11
3245 4129 1.544759 CCGGGAGCTGTTACACCTTTT 60.545 52.381 0.00 0.00 0.00 2.27
3246 4130 2.227194 CGGGAGCTGTTACACCTTTTT 58.773 47.619 0.00 0.00 0.00 1.94
3250 4134 4.023107 GGGAGCTGTTACACCTTTTTCTTC 60.023 45.833 0.00 0.00 0.00 2.87
3275 4160 9.425577 TCACTTTATTTATCACGTACATTGTCA 57.574 29.630 0.00 0.00 0.00 3.58
3346 4234 4.699257 GTGAAGATTGCAGTTCAAGATCCT 59.301 41.667 9.14 0.00 38.22 3.24
3487 4377 4.496336 GCCGATTCAGCCTGGCCT 62.496 66.667 16.57 0.00 41.70 5.19
3600 4491 3.338249 CATGAGACAACCATTTCGACCT 58.662 45.455 0.00 0.00 0.00 3.85
3746 4638 5.065218 AGCGCCATCTACTTAAACAAATGAG 59.935 40.000 2.29 0.00 0.00 2.90
3795 4687 7.816640 TGACAGTTCAAATTATTAAGAGCCAC 58.183 34.615 0.00 0.00 0.00 5.01
3836 4734 2.766263 TCATCGGTGCTACCAGATCTTT 59.234 45.455 0.00 0.00 38.47 2.52
3862 4760 6.557568 TCTTCCTCTCCTCTTCTTCTACTTT 58.442 40.000 0.00 0.00 0.00 2.66
3876 4786 5.822519 TCTTCTACTTTTGCTTCTGCTTCAA 59.177 36.000 0.00 0.00 40.48 2.69
3984 4906 4.605183 TCCAACCTTTTGTTCTTCCAAGA 58.395 39.130 0.00 0.00 34.00 3.02
3986 4908 4.363138 CAACCTTTTGTTCTTCCAAGAGC 58.637 43.478 0.00 0.00 36.22 4.09
4005 4927 1.483415 GCCATTGTCAAATGCCTCCAT 59.517 47.619 0.00 0.00 41.66 3.41
4066 4988 1.668294 CTCCTCAGGCACGTGTTCT 59.332 57.895 18.38 12.28 0.00 3.01
4078 5000 1.028905 CGTGTTCTTCAAAGCCCCAA 58.971 50.000 0.00 0.00 0.00 4.12
4215 5163 4.591498 TGCCCTCTCAACAGTTACTCTAAA 59.409 41.667 0.00 0.00 0.00 1.85
4518 5466 1.159905 TGTAGTGCTTCCTCCCCCA 59.840 57.895 0.00 0.00 0.00 4.96
4646 5594 8.453320 TCAACTTGAACAATACAAGCATATCAG 58.547 33.333 0.00 0.00 45.66 2.90
4653 5601 4.645863 ATACAAGCATATCAGGCCATGA 57.354 40.909 5.01 6.42 43.70 3.07
4739 5689 0.842030 TGGAGTCTGGCCAGATGGTT 60.842 55.000 37.07 22.56 39.97 3.67
4767 5717 2.788807 TCATCTCTCCTCTAAGCTCCCT 59.211 50.000 0.00 0.00 0.00 4.20
4772 5722 4.017407 TCTCTCCTCTAAGCTCCCTAACAA 60.017 45.833 0.00 0.00 0.00 2.83
4842 5792 0.941542 AACGTGTTGTGAATGACCCG 59.058 50.000 0.00 0.00 0.00 5.28
4852 5802 0.902531 GAATGACCCGGAACCTCTGA 59.097 55.000 0.73 0.00 0.00 3.27
4866 5816 4.255510 ACCTCTGATTATGGCCAACAAT 57.744 40.909 10.96 13.00 0.00 2.71
5045 5995 4.163078 TCAGATTTTGGATCCTCTCCTGTC 59.837 45.833 14.23 2.49 45.21 3.51
5143 6093 3.956199 CCCATGCCTGAATCACACTAATT 59.044 43.478 0.00 0.00 0.00 1.40
5167 6117 2.239402 TGTTGCTGCCTGGATTATCAGA 59.761 45.455 0.00 0.00 36.93 3.27
5239 6192 4.523558 GGTCGATCCTACACCTAGCTTAAT 59.476 45.833 0.00 0.00 0.00 1.40
5283 6240 0.768609 GGGGGAGGGCTGCTACTTAT 60.769 60.000 0.00 0.00 0.00 1.73
5290 6247 1.543429 GGGCTGCTACTTATCGGCATT 60.543 52.381 0.00 0.00 36.35 3.56
5302 6259 1.043116 TCGGCATTGGAGACGAGGAT 61.043 55.000 0.00 0.00 0.00 3.24
5315 6273 1.536662 GAGGATGGCGTAGGGGGAT 60.537 63.158 0.00 0.00 0.00 3.85
5325 6283 2.146724 TAGGGGGATCCATGGCACG 61.147 63.158 15.23 0.00 38.24 5.34
5326 6284 2.613576 TAGGGGGATCCATGGCACGA 62.614 60.000 15.23 0.00 38.24 4.35
5328 6286 1.526917 GGGGATCCATGGCACGAAG 60.527 63.158 15.23 0.00 0.00 3.79
5463 6442 0.909610 TGGTGAGGCAGTAGGGAAGG 60.910 60.000 0.00 0.00 0.00 3.46
5519 6501 0.324275 GGGGTGAGGCTAATTTGGCA 60.324 55.000 15.27 0.00 34.73 4.92
5616 6612 4.383861 CACTCAGCCTGGCTCGCA 62.384 66.667 20.49 4.70 36.40 5.10
5642 6638 2.101575 TCGATCCGAGCGTTTCCG 59.898 61.111 5.87 0.00 37.07 4.30
5719 7245 4.511838 GGCAACCAAACAGGCCTA 57.488 55.556 3.98 0.00 43.09 3.93
5734 7261 2.415843 CTATCCTTTCCCGCGCGA 59.584 61.111 34.63 9.90 0.00 5.87
5774 7598 2.781158 GCAACCAAACACACGCCCT 61.781 57.895 0.00 0.00 0.00 5.19
5775 7599 1.813192 CAACCAAACACACGCCCTT 59.187 52.632 0.00 0.00 0.00 3.95
5777 7601 0.681564 AACCAAACACACGCCCTTGA 60.682 50.000 0.00 0.00 0.00 3.02
5778 7602 0.467290 ACCAAACACACGCCCTTGAT 60.467 50.000 0.00 0.00 0.00 2.57
5787 7859 1.197721 CACGCCCTTGATGTCTTTGTC 59.802 52.381 0.00 0.00 0.00 3.18
5805 7877 9.941664 GTCTTTGTCATCATCTTGTTATTATGG 57.058 33.333 0.00 0.00 0.00 2.74
5897 10649 7.943079 ATGTTGATTCAAGTGTTATCATGGA 57.057 32.000 0.00 0.00 0.00 3.41
5991 10743 7.557875 AAATGGATTTTTCCCTGATCTTTCA 57.442 32.000 0.00 0.00 0.00 2.69
6052 10804 4.565652 CCAACAATCCTACTGGTACTGCTT 60.566 45.833 0.00 0.00 34.23 3.91
6197 10949 2.282462 AGCAAAAGAGGTGGGCCG 60.282 61.111 0.00 0.00 40.50 6.13
6397 11152 1.668419 AATACGCTGGATTCACTGGC 58.332 50.000 0.00 0.00 0.00 4.85
6660 11422 4.247267 AGACGTTGTCGGATTCTACAAA 57.753 40.909 0.00 0.00 41.85 2.83
6897 11659 2.026542 AGAGACCATCATTGAAGCTGCA 60.027 45.455 1.02 0.00 0.00 4.41
6953 11718 1.067846 TCAACCCGTGTCATTCTCTCG 60.068 52.381 0.00 0.00 0.00 4.04
6954 11719 0.246635 AACCCGTGTCATTCTCTCGG 59.753 55.000 0.00 0.00 40.72 4.63
6957 11722 1.320344 CCGTGTCATTCTCTCGGGGA 61.320 60.000 0.00 0.00 37.92 4.81
6958 11723 0.530744 CGTGTCATTCTCTCGGGGAA 59.469 55.000 0.00 0.00 0.00 3.97
6959 11724 1.736032 CGTGTCATTCTCTCGGGGAAC 60.736 57.143 0.00 0.00 0.00 3.62
7001 11774 5.514274 TGGAACACAAGATTTGTTTCTCC 57.486 39.130 12.25 9.69 43.23 3.71
7007 11780 3.751698 ACAAGATTTGTTTCTCCGCTACC 59.248 43.478 0.00 0.00 42.22 3.18
7030 11803 3.375922 GGAAAGTGTCCGAACAGAAACAA 59.624 43.478 0.00 0.00 36.40 2.83
7060 11834 0.324943 TTGCTCCTCTAGGTGTTGCC 59.675 55.000 0.00 0.00 36.34 4.52
7111 11885 2.803956 TCTACTCGGTTCCTGATGTGT 58.196 47.619 0.00 0.00 0.00 3.72
7129 11903 2.052237 CTGCGTTGTTGCCGTCAC 60.052 61.111 0.00 0.00 0.00 3.67
7145 11919 4.174009 CCGTCACACTTGTATGTCTAAGG 58.826 47.826 0.00 0.00 0.00 2.69
7181 11955 4.941713 AGCCAATCCAAACTGGGTAATAA 58.058 39.130 0.00 0.00 41.58 1.40
7230 12004 7.158021 TGTGTGATGTGTTGACATTATCTGTA 58.842 34.615 10.56 0.00 43.22 2.74
7231 12005 7.331687 TGTGTGATGTGTTGACATTATCTGTAG 59.668 37.037 10.56 0.00 43.22 2.74
7232 12006 6.313658 TGTGATGTGTTGACATTATCTGTAGC 59.686 38.462 10.56 0.00 43.22 3.58
7233 12007 6.536582 GTGATGTGTTGACATTATCTGTAGCT 59.463 38.462 0.00 0.00 43.22 3.32
7235 12009 8.257306 TGATGTGTTGACATTATCTGTAGCTAA 58.743 33.333 0.00 0.00 43.22 3.09
7342 12143 3.314553 TCGAAATCGAGTTGTGAGTTCC 58.685 45.455 1.32 0.00 44.22 3.62
7343 12144 3.005472 TCGAAATCGAGTTGTGAGTTCCT 59.995 43.478 1.32 0.00 44.22 3.36
7344 12145 3.741344 CGAAATCGAGTTGTGAGTTCCTT 59.259 43.478 1.32 0.00 43.02 3.36
7345 12146 4.211374 CGAAATCGAGTTGTGAGTTCCTTT 59.789 41.667 1.32 0.00 43.02 3.11
7346 12147 5.404366 CGAAATCGAGTTGTGAGTTCCTTTA 59.596 40.000 1.32 0.00 43.02 1.85
7347 12148 6.090898 CGAAATCGAGTTGTGAGTTCCTTTAT 59.909 38.462 1.32 0.00 43.02 1.40
7348 12149 6.727824 AATCGAGTTGTGAGTTCCTTTATG 57.272 37.500 0.00 0.00 0.00 1.90
7800 19117 6.699642 GCCTTCAATGCAGTTTAAACTTTACA 59.300 34.615 18.25 16.05 37.08 2.41
7843 19160 7.672983 TTAACTAGCAGAGAATTTTGACTGG 57.327 36.000 0.00 0.00 0.00 4.00
7845 19162 2.867624 AGCAGAGAATTTTGACTGGCA 58.132 42.857 0.00 0.00 0.00 4.92
7880 19197 1.751927 GCTGGGATGCAAGGTCCTG 60.752 63.158 4.86 3.35 36.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 97 7.505585 TCTCTGTTTTATGTTTCCCTTCATTGT 59.494 33.333 0.00 0.00 0.00 2.71
100 101 6.831353 TGTTCTCTGTTTTATGTTTCCCTTCA 59.169 34.615 0.00 0.00 0.00 3.02
246 248 0.766288 GAGAAGATGGGGAGGAGGGG 60.766 65.000 0.00 0.00 0.00 4.79
247 249 0.766288 GGAGAAGATGGGGAGGAGGG 60.766 65.000 0.00 0.00 0.00 4.30
353 358 1.550374 AGAGGAGAGGGGAGGGGAA 60.550 63.158 0.00 0.00 0.00 3.97
423 428 0.884704 GAAGCAACTCGGCTGGAACA 60.885 55.000 0.00 0.00 45.07 3.18
434 439 3.137533 GCAGAGAAGAACTGAAGCAACT 58.862 45.455 0.00 0.00 37.54 3.16
515 521 7.842525 CAAATATGCAATACATCTCCGAAAC 57.157 36.000 0.00 0.00 40.38 2.78
581 587 6.126568 GCAAATTTATCCATTGCAAGCAAT 57.873 33.333 14.13 14.13 46.57 3.56
582 588 5.548706 GCAAATTTATCCATTGCAAGCAA 57.451 34.783 10.19 10.19 46.57 3.91
609 615 8.695575 TTCGGAGATGTATCGCATATTTGCATT 61.696 37.037 8.89 0.00 43.21 3.56
610 616 7.290964 TTCGGAGATGTATCGCATATTTGCAT 61.291 38.462 8.89 4.14 43.21 3.96
611 617 6.024483 TTCGGAGATGTATCGCATATTTGCA 61.024 40.000 8.89 0.00 43.21 4.08
612 618 3.926527 TCGGAGATGTATCGCATATTTGC 59.073 43.478 0.00 0.00 45.78 3.68
613 619 6.466308 TTTCGGAGATGTATCGCATATTTG 57.534 37.500 0.00 0.00 38.06 2.32
614 620 8.771920 TTATTTCGGAGATGTATCGCATATTT 57.228 30.769 0.00 0.00 38.06 1.40
615 621 8.771920 TTTATTTCGGAGATGTATCGCATATT 57.228 30.769 0.00 0.00 38.06 1.28
616 622 8.948631 ATTTATTTCGGAGATGTATCGCATAT 57.051 30.769 0.00 0.00 38.06 1.78
617 623 8.655970 CAATTTATTTCGGAGATGTATCGCATA 58.344 33.333 0.00 0.00 38.06 3.14
618 624 7.361201 CCAATTTATTTCGGAGATGTATCGCAT 60.361 37.037 0.00 0.00 41.24 4.73
619 625 6.073276 CCAATTTATTTCGGAGATGTATCGCA 60.073 38.462 0.00 0.00 35.04 5.10
620 626 6.147164 TCCAATTTATTTCGGAGATGTATCGC 59.853 38.462 0.00 0.00 35.04 4.58
621 627 7.652300 TCCAATTTATTTCGGAGATGTATCG 57.348 36.000 0.00 0.00 35.04 2.92
622 628 9.003658 ACATCCAATTTATTTCGGAGATGTATC 57.996 33.333 0.00 0.00 40.81 2.24
623 629 8.924511 ACATCCAATTTATTTCGGAGATGTAT 57.075 30.769 0.00 0.00 40.81 2.29
625 631 8.924511 ATACATCCAATTTATTTCGGAGATGT 57.075 30.769 7.39 7.39 43.85 3.06
626 632 9.616634 CAATACATCCAATTTATTTCGGAGATG 57.383 33.333 0.00 0.00 35.04 2.90
627 633 8.299570 GCAATACATCCAATTTATTTCGGAGAT 58.700 33.333 0.00 0.00 35.04 2.75
628 634 7.284261 TGCAATACATCCAATTTATTTCGGAGA 59.716 33.333 0.00 0.00 0.00 3.71
629 635 7.424803 TGCAATACATCCAATTTATTTCGGAG 58.575 34.615 0.00 0.00 0.00 4.63
630 636 7.340122 TGCAATACATCCAATTTATTTCGGA 57.660 32.000 0.00 0.00 0.00 4.55
631 637 9.859427 ATATGCAATACATCCAATTTATTTCGG 57.141 29.630 0.00 0.00 40.38 4.30
638 644 8.926374 TCCTGAAATATGCAATACATCCAATTT 58.074 29.630 0.00 0.00 40.38 1.82
639 645 8.481492 TCCTGAAATATGCAATACATCCAATT 57.519 30.769 0.00 0.00 40.38 2.32
640 646 8.481492 TTCCTGAAATATGCAATACATCCAAT 57.519 30.769 0.00 0.00 40.38 3.16
641 647 7.779326 TCTTCCTGAAATATGCAATACATCCAA 59.221 33.333 0.00 0.00 40.38 3.53
642 648 7.289310 TCTTCCTGAAATATGCAATACATCCA 58.711 34.615 0.00 0.00 40.38 3.41
643 649 7.750229 TCTTCCTGAAATATGCAATACATCC 57.250 36.000 0.00 0.00 40.38 3.51
646 652 9.851686 ACTTATCTTCCTGAAATATGCAATACA 57.148 29.630 0.00 0.00 0.00 2.29
648 654 8.786898 GCACTTATCTTCCTGAAATATGCAATA 58.213 33.333 0.00 0.00 0.00 1.90
649 655 7.286087 TGCACTTATCTTCCTGAAATATGCAAT 59.714 33.333 0.00 0.00 34.19 3.56
650 656 6.602803 TGCACTTATCTTCCTGAAATATGCAA 59.397 34.615 0.00 0.00 34.19 4.08
651 657 6.038603 GTGCACTTATCTTCCTGAAATATGCA 59.961 38.462 10.32 0.00 34.49 3.96
652 658 6.038603 TGTGCACTTATCTTCCTGAAATATGC 59.961 38.462 19.41 0.00 0.00 3.14
653 659 7.558161 TGTGCACTTATCTTCCTGAAATATG 57.442 36.000 19.41 0.00 0.00 1.78
654 660 8.627403 CATTGTGCACTTATCTTCCTGAAATAT 58.373 33.333 19.41 0.00 0.00 1.28
655 661 7.067372 CCATTGTGCACTTATCTTCCTGAAATA 59.933 37.037 19.41 0.00 0.00 1.40
656 662 6.127535 CCATTGTGCACTTATCTTCCTGAAAT 60.128 38.462 19.41 1.34 0.00 2.17
657 663 5.183713 CCATTGTGCACTTATCTTCCTGAAA 59.816 40.000 19.41 0.00 0.00 2.69
658 664 4.701651 CCATTGTGCACTTATCTTCCTGAA 59.298 41.667 19.41 0.00 0.00 3.02
659 665 4.019411 TCCATTGTGCACTTATCTTCCTGA 60.019 41.667 19.41 0.00 0.00 3.86
660 666 4.264253 TCCATTGTGCACTTATCTTCCTG 58.736 43.478 19.41 0.61 0.00 3.86
758 765 8.421701 CAACGCACTATAACAAATAAACAAACC 58.578 33.333 0.00 0.00 0.00 3.27
775 782 3.691342 AGGCTCGCCAACGCACTA 61.691 61.111 11.02 0.00 39.84 2.74
911 923 0.681733 TGAGTCCACCAGCTCACTTC 59.318 55.000 0.00 0.00 36.89 3.01
1080 1126 4.147449 GTACGGTACCGGGGGTGC 62.147 72.222 35.86 16.38 44.69 5.01
1081 1127 2.362889 AGTACGGTACCGGGGGTG 60.363 66.667 35.86 9.96 44.69 4.61
1082 1128 2.362889 CAGTACGGTACCGGGGGT 60.363 66.667 35.86 18.97 44.69 4.95
1083 1129 3.841758 GCAGTACGGTACCGGGGG 61.842 72.222 35.86 22.75 44.69 5.40
1084 1130 4.197498 CGCAGTACGGTACCGGGG 62.197 72.222 35.86 22.32 44.69 5.73
1085 1131 4.860261 GCGCAGTACGGTACCGGG 62.860 72.222 35.86 22.75 44.69 5.73
1088 1134 3.976902 AAGCGCGCAGTACGGTACC 62.977 63.158 35.10 0.16 43.93 3.34
1181 1258 0.107165 ATTAACGGGCAGCCTTCTCC 60.107 55.000 12.43 0.00 0.00 3.71
1249 1326 1.899437 TAGAAGCAGGGCGTTGGAGG 61.899 60.000 0.00 0.00 0.00 4.30
1257 1336 5.897377 TTTGAAAGTATTAGAAGCAGGGC 57.103 39.130 0.00 0.00 0.00 5.19
1310 1396 5.122869 TGTGTAAGCTTCATCAGAAAGCATC 59.877 40.000 0.00 1.13 33.30 3.91
1408 1495 8.594687 CAACAAGAACAAAAATCAAAGAACGAT 58.405 29.630 0.00 0.00 0.00 3.73
1478 1565 1.962807 TGGCAACCTGAATGAAGTTGG 59.037 47.619 4.48 0.00 40.92 3.77
1530 1618 4.035017 CCAGGCTTATAATTTTTGCGTCG 58.965 43.478 0.00 0.00 0.00 5.12
1623 1711 7.978975 ACACAGCTAGCAATTTCTTGTTTTTAA 59.021 29.630 18.83 0.00 34.69 1.52
1667 2015 4.240323 TCTTTCCCTTACTTCCTGAGGTT 58.760 43.478 0.00 0.00 0.00 3.50
1669 2017 4.910458 TTCTTTCCCTTACTTCCTGAGG 57.090 45.455 0.00 0.00 0.00 3.86
2047 2405 4.640771 TTCTTAGTCCACTCCTGCAAAT 57.359 40.909 0.00 0.00 0.00 2.32
2072 2431 9.537192 AAATTATGCAACAGAATGAACATATGG 57.463 29.630 7.80 0.00 39.69 2.74
2111 2573 5.556915 AGACCCGTCAAAGAACAATAATGA 58.443 37.500 0.00 0.00 0.00 2.57
2170 2632 4.165950 TCCATAACCACTGTAGCCATCAAT 59.834 41.667 0.00 0.00 0.00 2.57
2222 2684 5.201713 TCCATTTAAGATAGCGGTGAGAG 57.798 43.478 0.00 0.00 0.00 3.20
2230 2692 7.329717 CCTACGAAGTCATCCATTTAAGATAGC 59.670 40.741 0.00 0.00 43.93 2.97
2232 2694 8.246430 ACCTACGAAGTCATCCATTTAAGATA 57.754 34.615 0.00 0.00 43.93 1.98
2257 2729 8.737168 AGTTAGATAAGTTTGATTGCATGCTA 57.263 30.769 20.33 12.49 0.00 3.49
2422 2971 6.346096 TGTCCTAGTTGAATATGTTACCAGC 58.654 40.000 0.00 0.00 0.00 4.85
2424 2973 6.631766 GCCTGTCCTAGTTGAATATGTTACCA 60.632 42.308 0.00 0.00 0.00 3.25
2425 2974 5.758784 GCCTGTCCTAGTTGAATATGTTACC 59.241 44.000 0.00 0.00 0.00 2.85
2428 2977 4.442706 CGCCTGTCCTAGTTGAATATGTT 58.557 43.478 0.00 0.00 0.00 2.71
2429 2978 3.741388 GCGCCTGTCCTAGTTGAATATGT 60.741 47.826 0.00 0.00 0.00 2.29
2484 3207 0.617413 ACCAGACCTTCAGATGCCAG 59.383 55.000 0.00 0.00 0.00 4.85
2497 3220 7.226720 TCAAGAAACAGAACTAAATGACCAGAC 59.773 37.037 0.00 0.00 0.00 3.51
2499 3222 7.496529 TCAAGAAACAGAACTAAATGACCAG 57.503 36.000 0.00 0.00 0.00 4.00
2563 3299 9.678941 CCAGTAAAAGAAAAGTTTAAGTCCATC 57.321 33.333 0.00 0.00 0.00 3.51
2568 3304 8.584063 TGGTCCAGTAAAAGAAAAGTTTAAGT 57.416 30.769 0.00 0.00 0.00 2.24
2571 3307 7.780745 TGGATGGTCCAGTAAAAGAAAAGTTTA 59.219 33.333 0.00 0.00 42.67 2.01
2573 3309 6.133356 TGGATGGTCCAGTAAAAGAAAAGTT 58.867 36.000 0.00 0.00 42.67 2.66
2590 3330 4.985538 AGTCACACAAGTATTTGGATGGT 58.014 39.130 2.81 0.00 38.66 3.55
2724 3605 9.223099 GCCCTTAGTTTCTGTATAAAACAACTA 57.777 33.333 2.05 0.00 38.73 2.24
2725 3606 7.722285 TGCCCTTAGTTTCTGTATAAAACAACT 59.278 33.333 2.05 0.00 38.73 3.16
2726 3607 7.878036 TGCCCTTAGTTTCTGTATAAAACAAC 58.122 34.615 2.05 0.00 38.73 3.32
2734 3618 4.301072 TTGCTGCCCTTAGTTTCTGTAT 57.699 40.909 0.00 0.00 0.00 2.29
2773 3657 3.348647 TTCTTCAATGCCAAGATCCGA 57.651 42.857 0.00 0.00 29.89 4.55
2784 3668 9.869844 GAGACAAATATATCGGTTTCTTCAATG 57.130 33.333 0.00 0.00 0.00 2.82
2820 3704 6.811665 CCTGTAGACGAGAAATGTCACATTTA 59.188 38.462 15.91 0.00 38.83 1.40
2862 3746 4.251268 CTGTCTCGTAAAGTAAAAGGGGG 58.749 47.826 0.00 0.00 0.00 5.40
2867 3751 8.665643 TGAAAATCCTGTCTCGTAAAGTAAAA 57.334 30.769 0.00 0.00 0.00 1.52
2868 3752 7.095355 GCTGAAAATCCTGTCTCGTAAAGTAAA 60.095 37.037 0.00 0.00 0.00 2.01
2869 3753 6.367969 GCTGAAAATCCTGTCTCGTAAAGTAA 59.632 38.462 0.00 0.00 0.00 2.24
2870 3754 5.867716 GCTGAAAATCCTGTCTCGTAAAGTA 59.132 40.000 0.00 0.00 0.00 2.24
2871 3755 4.691216 GCTGAAAATCCTGTCTCGTAAAGT 59.309 41.667 0.00 0.00 0.00 2.66
2872 3756 4.690748 TGCTGAAAATCCTGTCTCGTAAAG 59.309 41.667 0.00 0.00 0.00 1.85
2873 3757 4.451096 GTGCTGAAAATCCTGTCTCGTAAA 59.549 41.667 0.00 0.00 0.00 2.01
2874 3758 3.994392 GTGCTGAAAATCCTGTCTCGTAA 59.006 43.478 0.00 0.00 0.00 3.18
2875 3759 3.585862 GTGCTGAAAATCCTGTCTCGTA 58.414 45.455 0.00 0.00 0.00 3.43
2876 3760 2.417719 GTGCTGAAAATCCTGTCTCGT 58.582 47.619 0.00 0.00 0.00 4.18
2877 3761 1.734465 GGTGCTGAAAATCCTGTCTCG 59.266 52.381 0.00 0.00 0.00 4.04
2878 3762 2.087646 GGGTGCTGAAAATCCTGTCTC 58.912 52.381 0.00 0.00 0.00 3.36
2879 3763 1.611673 CGGGTGCTGAAAATCCTGTCT 60.612 52.381 0.00 0.00 0.00 3.41
2880 3764 0.804989 CGGGTGCTGAAAATCCTGTC 59.195 55.000 0.00 0.00 0.00 3.51
2881 3765 0.609131 CCGGGTGCTGAAAATCCTGT 60.609 55.000 0.00 0.00 0.00 4.00
2882 3766 1.315257 CCCGGGTGCTGAAAATCCTG 61.315 60.000 14.18 0.00 0.00 3.86
2883 3767 1.000896 CCCGGGTGCTGAAAATCCT 60.001 57.895 14.18 0.00 0.00 3.24
2884 3768 1.304134 ACCCGGGTGCTGAAAATCC 60.304 57.895 29.69 0.00 0.00 3.01
2885 3769 1.883021 CACCCGGGTGCTGAAAATC 59.117 57.895 39.44 0.00 39.39 2.17
2886 3770 4.095590 CACCCGGGTGCTGAAAAT 57.904 55.556 39.44 4.30 39.39 1.82
2901 3785 2.124411 TCATAGAGGGTTTAGGGGCAC 58.876 52.381 0.00 0.00 0.00 5.01
2902 3786 2.508300 GTTCATAGAGGGTTTAGGGGCA 59.492 50.000 0.00 0.00 0.00 5.36
2903 3787 2.508300 TGTTCATAGAGGGTTTAGGGGC 59.492 50.000 0.00 0.00 0.00 5.80
2904 3788 3.780850 ACTGTTCATAGAGGGTTTAGGGG 59.219 47.826 0.00 0.00 0.00 4.79
2905 3789 4.469945 TCACTGTTCATAGAGGGTTTAGGG 59.530 45.833 0.00 0.00 0.00 3.53
2906 3790 5.677319 TCACTGTTCATAGAGGGTTTAGG 57.323 43.478 0.00 0.00 0.00 2.69
2907 3791 8.567285 AAATTCACTGTTCATAGAGGGTTTAG 57.433 34.615 0.00 0.00 0.00 1.85
2908 3792 8.934023 AAAATTCACTGTTCATAGAGGGTTTA 57.066 30.769 0.00 0.00 0.00 2.01
2909 3793 7.839680 AAAATTCACTGTTCATAGAGGGTTT 57.160 32.000 0.00 0.00 0.00 3.27
2910 3794 8.934023 TTAAAATTCACTGTTCATAGAGGGTT 57.066 30.769 0.00 0.00 0.00 4.11
2911 3795 8.934023 TTTAAAATTCACTGTTCATAGAGGGT 57.066 30.769 0.00 0.00 0.00 4.34
2936 3820 9.460019 TTTGATTTCCCAAAGTTTCAGATTTTT 57.540 25.926 0.00 0.00 32.77 1.94
2937 3821 8.892723 GTTTGATTTCCCAAAGTTTCAGATTTT 58.107 29.630 0.00 0.00 36.78 1.82
2938 3822 8.267183 AGTTTGATTTCCCAAAGTTTCAGATTT 58.733 29.630 0.00 0.00 36.57 2.17
2939 3823 7.795047 AGTTTGATTTCCCAAAGTTTCAGATT 58.205 30.769 0.00 0.00 36.57 2.40
2940 3824 7.365497 AGTTTGATTTCCCAAAGTTTCAGAT 57.635 32.000 0.00 0.00 36.57 2.90
2941 3825 6.790232 AGTTTGATTTCCCAAAGTTTCAGA 57.210 33.333 0.00 0.00 36.57 3.27
2942 3826 7.041107 TCAAGTTTGATTTCCCAAAGTTTCAG 58.959 34.615 0.00 0.00 43.33 3.02
2943 3827 6.940739 TCAAGTTTGATTTCCCAAAGTTTCA 58.059 32.000 0.00 0.00 43.33 2.69
2969 3853 7.473027 ACTTTGCAAGATCATCAAAACTTTG 57.527 32.000 0.00 0.00 39.48 2.77
2970 3854 8.496707 AAACTTTGCAAGATCATCAAAACTTT 57.503 26.923 0.00 1.11 30.47 2.66
2971 3855 8.496707 AAAACTTTGCAAGATCATCAAAACTT 57.503 26.923 0.00 0.00 30.47 2.66
2972 3856 9.252962 CTAAAACTTTGCAAGATCATCAAAACT 57.747 29.630 0.00 0.00 30.47 2.66
2973 3857 8.006027 GCTAAAACTTTGCAAGATCATCAAAAC 58.994 33.333 0.00 0.00 30.47 2.43
2974 3858 7.927629 AGCTAAAACTTTGCAAGATCATCAAAA 59.072 29.630 0.00 0.00 30.47 2.44
2975 3859 7.436118 AGCTAAAACTTTGCAAGATCATCAAA 58.564 30.769 0.00 1.46 0.00 2.69
2976 3860 6.985117 AGCTAAAACTTTGCAAGATCATCAA 58.015 32.000 0.00 0.00 0.00 2.57
2977 3861 6.579666 AGCTAAAACTTTGCAAGATCATCA 57.420 33.333 0.00 0.00 0.00 3.07
2978 3862 8.970691 TTTAGCTAAAACTTTGCAAGATCATC 57.029 30.769 16.53 0.00 0.00 2.92
2979 3863 9.762933 TTTTTAGCTAAAACTTTGCAAGATCAT 57.237 25.926 27.22 0.00 35.14 2.45
2980 3864 9.762933 ATTTTTAGCTAAAACTTTGCAAGATCA 57.237 25.926 27.22 11.33 38.48 2.92
2994 3878 8.395633 GCTCCTCGAATGTTATTTTTAGCTAAA 58.604 33.333 14.96 14.96 0.00 1.85
2995 3879 7.012044 GGCTCCTCGAATGTTATTTTTAGCTAA 59.988 37.037 0.86 0.86 0.00 3.09
2996 3880 6.482308 GGCTCCTCGAATGTTATTTTTAGCTA 59.518 38.462 0.00 0.00 0.00 3.32
2997 3881 5.297029 GGCTCCTCGAATGTTATTTTTAGCT 59.703 40.000 0.00 0.00 0.00 3.32
2998 3882 5.505819 GGGCTCCTCGAATGTTATTTTTAGC 60.506 44.000 0.00 0.00 0.00 3.09
2999 3883 5.823045 AGGGCTCCTCGAATGTTATTTTTAG 59.177 40.000 0.00 0.00 0.00 1.85
3000 3884 5.751586 AGGGCTCCTCGAATGTTATTTTTA 58.248 37.500 0.00 0.00 0.00 1.52
3001 3885 4.600062 AGGGCTCCTCGAATGTTATTTTT 58.400 39.130 0.00 0.00 0.00 1.94
3002 3886 4.200092 GAGGGCTCCTCGAATGTTATTTT 58.800 43.478 5.60 0.00 41.08 1.82
3003 3887 3.809905 GAGGGCTCCTCGAATGTTATTT 58.190 45.455 5.60 0.00 41.08 1.40
3004 3888 3.477210 GAGGGCTCCTCGAATGTTATT 57.523 47.619 5.60 0.00 41.08 1.40
3015 3899 3.850173 TGTTATTTTAGGTGAGGGCTCCT 59.150 43.478 0.00 0.00 40.85 3.69
3016 3900 4.230745 TGTTATTTTAGGTGAGGGCTCC 57.769 45.455 0.00 0.00 0.00 4.70
3017 3901 6.387465 GTTTTGTTATTTTAGGTGAGGGCTC 58.613 40.000 0.00 0.00 0.00 4.70
3018 3902 5.245301 GGTTTTGTTATTTTAGGTGAGGGCT 59.755 40.000 0.00 0.00 0.00 5.19
3019 3903 5.011227 TGGTTTTGTTATTTTAGGTGAGGGC 59.989 40.000 0.00 0.00 0.00 5.19
3020 3904 6.266786 AGTGGTTTTGTTATTTTAGGTGAGGG 59.733 38.462 0.00 0.00 0.00 4.30
3021 3905 7.145323 CAGTGGTTTTGTTATTTTAGGTGAGG 58.855 38.462 0.00 0.00 0.00 3.86
3022 3906 7.712797 ACAGTGGTTTTGTTATTTTAGGTGAG 58.287 34.615 0.00 0.00 0.00 3.51
3023 3907 7.648039 ACAGTGGTTTTGTTATTTTAGGTGA 57.352 32.000 0.00 0.00 0.00 4.02
3024 3908 7.976734 TGAACAGTGGTTTTGTTATTTTAGGTG 59.023 33.333 0.00 0.00 38.78 4.00
3025 3909 8.068892 TGAACAGTGGTTTTGTTATTTTAGGT 57.931 30.769 0.00 0.00 38.78 3.08
3026 3910 8.934507 TTGAACAGTGGTTTTGTTATTTTAGG 57.065 30.769 0.00 0.00 38.78 2.69
3028 3912 9.930693 ACTTTGAACAGTGGTTTTGTTATTTTA 57.069 25.926 0.00 0.00 38.78 1.52
3029 3913 8.840833 ACTTTGAACAGTGGTTTTGTTATTTT 57.159 26.923 0.00 0.00 38.78 1.82
3030 3914 8.840833 AACTTTGAACAGTGGTTTTGTTATTT 57.159 26.923 0.00 0.00 38.78 1.40
3031 3915 8.840833 AAACTTTGAACAGTGGTTTTGTTATT 57.159 26.923 0.00 0.00 38.78 1.40
3033 3917 9.360093 CATAAACTTTGAACAGTGGTTTTGTTA 57.640 29.630 0.00 0.00 38.78 2.41
3034 3918 7.875554 ACATAAACTTTGAACAGTGGTTTTGTT 59.124 29.630 0.00 0.00 41.21 2.83
3035 3919 7.382898 ACATAAACTTTGAACAGTGGTTTTGT 58.617 30.769 0.00 0.27 37.36 2.83
3036 3920 7.826260 ACATAAACTTTGAACAGTGGTTTTG 57.174 32.000 0.00 0.00 37.36 2.44
3037 3921 8.524487 TGTACATAAACTTTGAACAGTGGTTTT 58.476 29.630 0.00 0.00 37.36 2.43
3038 3922 8.057536 TGTACATAAACTTTGAACAGTGGTTT 57.942 30.769 0.00 0.00 37.36 3.27
3039 3923 7.633193 TGTACATAAACTTTGAACAGTGGTT 57.367 32.000 0.00 0.00 40.76 3.67
3040 3924 7.817418 ATGTACATAAACTTTGAACAGTGGT 57.183 32.000 6.56 0.00 0.00 4.16
3041 3925 9.528018 AAAATGTACATAAACTTTGAACAGTGG 57.472 29.630 9.21 0.00 0.00 4.00
3085 3969 0.882927 CGTCGAGCCCTCACCAAAAA 60.883 55.000 0.00 0.00 0.00 1.94
3086 3970 1.301401 CGTCGAGCCCTCACCAAAA 60.301 57.895 0.00 0.00 0.00 2.44
3087 3971 1.750341 TTCGTCGAGCCCTCACCAAA 61.750 55.000 0.00 0.00 0.00 3.28
3088 3972 2.154798 CTTCGTCGAGCCCTCACCAA 62.155 60.000 0.00 0.00 0.00 3.67
3089 3973 2.599281 TTCGTCGAGCCCTCACCA 60.599 61.111 0.00 0.00 0.00 4.17
3090 3974 2.182030 CTTCGTCGAGCCCTCACC 59.818 66.667 0.00 0.00 0.00 4.02
3091 3975 2.156051 AACCTTCGTCGAGCCCTCAC 62.156 60.000 0.00 0.00 0.00 3.51
3092 3976 0.609957 TAACCTTCGTCGAGCCCTCA 60.610 55.000 0.00 0.00 0.00 3.86
3093 3977 0.745468 ATAACCTTCGTCGAGCCCTC 59.255 55.000 0.00 0.00 0.00 4.30
3094 3978 1.192428 AATAACCTTCGTCGAGCCCT 58.808 50.000 0.00 0.00 0.00 5.19
3095 3979 1.931841 GAAATAACCTTCGTCGAGCCC 59.068 52.381 0.00 0.00 0.00 5.19
3096 3980 1.587034 CGAAATAACCTTCGTCGAGCC 59.413 52.381 0.00 0.00 42.53 4.70
3097 3981 2.973155 CGAAATAACCTTCGTCGAGC 57.027 50.000 0.00 0.00 42.53 5.03
3104 3988 8.340443 ACAAAGTTTCAGTACGAAATAACCTTC 58.660 33.333 13.37 3.05 45.21 3.46
3105 3989 8.217131 ACAAAGTTTCAGTACGAAATAACCTT 57.783 30.769 13.37 10.06 45.21 3.50
3106 3990 7.797038 ACAAAGTTTCAGTACGAAATAACCT 57.203 32.000 13.37 5.99 45.21 3.50
3107 3991 9.590088 CTTACAAAGTTTCAGTACGAAATAACC 57.410 33.333 13.37 4.34 45.21 2.85
3111 3995 8.885722 TGTTCTTACAAAGTTTCAGTACGAAAT 58.114 29.630 13.37 3.64 45.21 2.17
3112 3996 8.254178 TGTTCTTACAAAGTTTCAGTACGAAA 57.746 30.769 8.24 8.24 41.40 3.46
3113 3997 7.830940 TGTTCTTACAAAGTTTCAGTACGAA 57.169 32.000 0.00 2.67 0.00 3.85
3114 3998 9.531942 TTATGTTCTTACAAAGTTTCAGTACGA 57.468 29.630 0.00 0.00 37.91 3.43
3127 4011 9.753674 AGGGATCAAAGATTTATGTTCTTACAA 57.246 29.630 0.00 0.00 37.91 2.41
3128 4012 9.177608 CAGGGATCAAAGATTTATGTTCTTACA 57.822 33.333 0.00 0.00 38.95 2.41
3129 4013 9.396022 TCAGGGATCAAAGATTTATGTTCTTAC 57.604 33.333 0.00 0.00 33.17 2.34
3130 4014 9.973661 TTCAGGGATCAAAGATTTATGTTCTTA 57.026 29.630 0.00 0.00 33.17 2.10
3131 4015 8.884124 TTCAGGGATCAAAGATTTATGTTCTT 57.116 30.769 0.00 0.00 34.95 2.52
3132 4016 8.884124 TTTCAGGGATCAAAGATTTATGTTCT 57.116 30.769 0.00 0.00 0.00 3.01
3133 4017 8.743714 ACTTTCAGGGATCAAAGATTTATGTTC 58.256 33.333 9.54 0.00 34.30 3.18
3134 4018 8.655935 ACTTTCAGGGATCAAAGATTTATGTT 57.344 30.769 9.54 0.00 34.30 2.71
3135 4019 8.655935 AACTTTCAGGGATCAAAGATTTATGT 57.344 30.769 9.54 0.00 34.30 2.29
3136 4020 9.578439 GAAACTTTCAGGGATCAAAGATTTATG 57.422 33.333 9.54 0.00 34.30 1.90
3137 4021 9.312904 TGAAACTTTCAGGGATCAAAGATTTAT 57.687 29.630 9.54 0.00 34.08 1.40
3138 4022 8.704849 TGAAACTTTCAGGGATCAAAGATTTA 57.295 30.769 9.54 0.29 34.08 1.40
3139 4023 7.601705 TGAAACTTTCAGGGATCAAAGATTT 57.398 32.000 9.54 6.80 34.08 2.17
3190 4074 9.253832 ACACCCTCATGAACAATAAATTCATAA 57.746 29.630 0.00 0.00 43.39 1.90
3191 4075 8.821686 ACACCCTCATGAACAATAAATTCATA 57.178 30.769 0.00 0.00 43.39 2.15
3192 4076 7.722949 ACACCCTCATGAACAATAAATTCAT 57.277 32.000 0.00 0.00 45.57 2.57
3193 4077 7.339212 CCTACACCCTCATGAACAATAAATTCA 59.661 37.037 0.00 0.00 40.25 2.57
3194 4078 7.201821 CCCTACACCCTCATGAACAATAAATTC 60.202 40.741 0.00 0.00 0.00 2.17
3195 4079 6.607198 CCCTACACCCTCATGAACAATAAATT 59.393 38.462 0.00 0.00 0.00 1.82
3196 4080 6.129179 CCCTACACCCTCATGAACAATAAAT 58.871 40.000 0.00 0.00 0.00 1.40
3197 4081 5.505780 CCCTACACCCTCATGAACAATAAA 58.494 41.667 0.00 0.00 0.00 1.40
3198 4082 4.080015 CCCCTACACCCTCATGAACAATAA 60.080 45.833 0.00 0.00 0.00 1.40
3199 4083 3.458118 CCCCTACACCCTCATGAACAATA 59.542 47.826 0.00 0.00 0.00 1.90
3200 4084 2.242196 CCCCTACACCCTCATGAACAAT 59.758 50.000 0.00 0.00 0.00 2.71
3201 4085 1.633432 CCCCTACACCCTCATGAACAA 59.367 52.381 0.00 0.00 0.00 2.83
3202 4086 1.285280 CCCCTACACCCTCATGAACA 58.715 55.000 0.00 0.00 0.00 3.18
3203 4087 0.107165 GCCCCTACACCCTCATGAAC 60.107 60.000 0.00 0.00 0.00 3.18
3204 4088 0.548926 TGCCCCTACACCCTCATGAA 60.549 55.000 0.00 0.00 0.00 2.57
3205 4089 1.082019 TGCCCCTACACCCTCATGA 59.918 57.895 0.00 0.00 0.00 3.07
3206 4090 1.224592 GTGCCCCTACACCCTCATG 59.775 63.158 0.00 0.00 34.35 3.07
3207 4091 3.741325 GTGCCCCTACACCCTCAT 58.259 61.111 0.00 0.00 34.35 2.90
3220 4104 3.712907 TAACAGCTCCCGGGTGCC 61.713 66.667 37.33 22.60 46.30 5.01
3221 4105 2.436115 GTAACAGCTCCCGGGTGC 60.436 66.667 35.10 35.10 46.30 5.01
3223 4107 2.590114 GGTGTAACAGCTCCCGGGT 61.590 63.158 22.86 1.40 39.98 5.28
3224 4108 1.838073 AAGGTGTAACAGCTCCCGGG 61.838 60.000 16.85 16.85 41.59 5.73
3225 4109 0.036306 AAAGGTGTAACAGCTCCCGG 59.964 55.000 0.00 0.00 41.59 5.73
3226 4110 1.892209 AAAAGGTGTAACAGCTCCCG 58.108 50.000 0.00 0.00 41.59 5.14
3227 4111 3.487372 AGAAAAAGGTGTAACAGCTCCC 58.513 45.455 0.00 0.00 41.59 4.30
3228 4112 4.578928 TGAAGAAAAAGGTGTAACAGCTCC 59.421 41.667 0.00 0.00 41.59 4.70
3229 4113 5.297029 AGTGAAGAAAAAGGTGTAACAGCTC 59.703 40.000 0.00 0.00 41.59 4.09
3230 4114 5.193679 AGTGAAGAAAAAGGTGTAACAGCT 58.806 37.500 0.00 0.00 44.48 4.24
3231 4115 5.500645 AGTGAAGAAAAAGGTGTAACAGC 57.499 39.130 0.00 0.00 39.98 4.40
3239 4123 9.893305 CGTGATAAATAAAGTGAAGAAAAAGGT 57.107 29.630 0.00 0.00 0.00 3.50
3240 4124 9.893305 ACGTGATAAATAAAGTGAAGAAAAAGG 57.107 29.630 0.00 0.00 0.00 3.11
3250 4134 9.472995 GTGACAATGTACGTGATAAATAAAGTG 57.527 33.333 0.00 0.00 0.00 3.16
3346 4234 8.684386 TTGCAGAATTTATTACGGGATATGAA 57.316 30.769 0.00 0.00 0.00 2.57
3423 4313 5.596836 AAATCACCACAAACATCACTTGT 57.403 34.783 0.00 0.00 41.53 3.16
3424 4314 6.738114 AGTAAATCACCACAAACATCACTTG 58.262 36.000 0.00 0.00 0.00 3.16
3444 4334 0.106619 ACCAAACACGCCCCAAGTAA 60.107 50.000 0.00 0.00 0.00 2.24
3538 4428 3.222173 ACCAAACTATGTGCAACTGGA 57.778 42.857 0.00 0.00 38.04 3.86
3543 4433 2.035704 CAGGCAACCAAACTATGTGCAA 59.964 45.455 0.00 0.00 33.79 4.08
3615 4506 1.105457 ATGTGCGCCTAATGCAATGT 58.895 45.000 4.18 0.00 45.23 2.71
3795 4687 3.391296 TGAACTAGCCCCTATTTAGCCAG 59.609 47.826 0.00 0.00 0.00 4.85
3836 4734 4.946160 AGAAGAAGAGGAGAGGAAGAGA 57.054 45.455 0.00 0.00 0.00 3.10
3862 4760 2.549754 GCAGTAGTTGAAGCAGAAGCAA 59.450 45.455 0.00 0.00 45.49 3.91
3876 4786 1.622811 AGAAGCAGCAGAAGCAGTAGT 59.377 47.619 0.00 0.00 45.49 2.73
3986 4908 3.068590 GGTATGGAGGCATTTGACAATGG 59.931 47.826 0.00 0.00 40.36 3.16
4005 4927 0.978667 TGTTAGCTCCGGCCATGGTA 60.979 55.000 14.67 0.00 39.73 3.25
4066 4988 0.783206 TCCTCCATTGGGGCTTTGAA 59.217 50.000 2.09 0.00 36.21 2.69
4215 5163 5.690464 ATTTAATCTCAGACACTCCAGCT 57.310 39.130 0.00 0.00 0.00 4.24
4424 5372 4.270153 TGGCTGGGAGGGGTCAGT 62.270 66.667 0.00 0.00 0.00 3.41
4518 5466 1.066573 GGTCACAGTCAGCAGCATACT 60.067 52.381 0.00 0.00 0.00 2.12
4646 5594 6.862209 TGACAATATACACTTTTTCATGGCC 58.138 36.000 0.00 0.00 0.00 5.36
4653 5601 8.028938 GGTGAGCATTGACAATATACACTTTTT 58.971 33.333 19.93 0.00 0.00 1.94
4739 5689 4.832266 GCTTAGAGGAGAGATGATCAGGAA 59.168 45.833 0.09 0.00 0.00 3.36
4842 5792 2.952310 GTTGGCCATAATCAGAGGTTCC 59.048 50.000 6.09 0.00 0.00 3.62
4852 5802 5.337956 TCCTCCATATTGTTGGCCATAAT 57.662 39.130 6.09 13.50 36.66 1.28
4866 5816 1.595311 AGTGGCCATGTTCCTCCATA 58.405 50.000 9.72 0.00 0.00 2.74
5045 5995 1.680989 GTCCATTGTTTCCCCGGGG 60.681 63.158 35.80 35.80 0.00 5.73
5143 6093 3.199727 TGATAATCCAGGCAGCAACACTA 59.800 43.478 0.00 0.00 0.00 2.74
5167 6117 0.821517 TTATGGACGCACGGATGAGT 59.178 50.000 0.00 0.00 42.14 3.41
5239 6192 1.278127 GTTAGCTCAGTGGTTAGGCCA 59.722 52.381 5.01 0.00 46.95 5.36
5273 6229 3.062763 CTCCAATGCCGATAAGTAGCAG 58.937 50.000 0.00 0.00 40.40 4.24
5278 6235 1.754803 TCGTCTCCAATGCCGATAAGT 59.245 47.619 0.00 0.00 0.00 2.24
5283 6240 1.043116 ATCCTCGTCTCCAATGCCGA 61.043 55.000 0.00 0.00 0.00 5.54
5290 6247 1.077285 TACGCCATCCTCGTCTCCA 60.077 57.895 0.00 0.00 40.89 3.86
5302 6259 2.146724 CATGGATCCCCCTACGCCA 61.147 63.158 9.90 0.00 35.38 5.69
5315 6273 0.535335 GACCTACTTCGTGCCATGGA 59.465 55.000 18.40 0.00 0.00 3.41
5325 6283 0.450983 CCGTCTGGTCGACCTACTTC 59.549 60.000 33.39 17.91 39.56 3.01
5326 6284 2.564471 CCGTCTGGTCGACCTACTT 58.436 57.895 33.39 0.00 39.56 2.24
5358 6316 4.783621 GCGGATCTGGTGCTGCCA 62.784 66.667 3.14 0.91 46.95 4.92
5406 6382 4.881019 TTTCAGATCTGAGCTATAGGCC 57.119 45.455 23.92 0.00 41.13 5.19
5407 6383 5.101628 CGATTTCAGATCTGAGCTATAGGC 58.898 45.833 23.92 9.17 41.13 3.93
5408 6384 5.101628 GCGATTTCAGATCTGAGCTATAGG 58.898 45.833 23.92 14.51 41.13 2.57
5616 6612 1.732732 CGCTCGGATCGACAGTTTCTT 60.733 52.381 0.00 0.00 0.00 2.52
5897 10649 7.129457 TCCTGCTGATATAAGTCAGTTTGAT 57.871 36.000 5.47 0.00 45.80 2.57
5954 10706 4.730949 AATCCATTTTCAGGACTGCATG 57.269 40.909 0.00 0.00 38.13 4.06
6052 10804 3.031736 GTGTTAGCTGGTCCCTAGATGA 58.968 50.000 0.00 0.00 0.00 2.92
6679 11441 3.623060 CCGAGGGATGTAAATGTGTCAAG 59.377 47.826 0.00 0.00 0.00 3.02
6687 11449 3.617284 GTTGAACCCGAGGGATGTAAAT 58.383 45.455 16.26 0.00 38.96 1.40
6897 11659 5.667539 TGTATAGCTGCTTCAGTCTTCTT 57.332 39.130 7.79 0.00 33.43 2.52
6953 11718 3.264845 TGGGCTCTTGGGTTCCCC 61.265 66.667 5.34 0.00 45.71 4.81
6954 11719 2.356667 CTGGGCTCTTGGGTTCCC 59.643 66.667 0.12 0.12 39.22 3.97
6957 11722 2.437897 CTGCTGGGCTCTTGGGTT 59.562 61.111 0.00 0.00 0.00 4.11
6958 11723 4.357279 GCTGCTGGGCTCTTGGGT 62.357 66.667 0.00 0.00 0.00 4.51
6959 11724 3.657038 ATGCTGCTGGGCTCTTGGG 62.657 63.158 0.00 0.00 0.00 4.12
6960 11725 1.255667 AAATGCTGCTGGGCTCTTGG 61.256 55.000 0.00 0.00 0.00 3.61
7001 11774 4.180496 GGACACTTTCCGGTAGCG 57.820 61.111 7.49 7.49 33.46 4.26
7010 11783 3.181514 CGTTGTTTCTGTTCGGACACTTT 60.182 43.478 0.00 0.00 0.00 2.66
7030 11803 2.365582 AGAGGAGCAAAAACAACACGT 58.634 42.857 0.00 0.00 0.00 4.49
7060 11834 6.635755 ACAAATTTAAATGGTTACGGATGGG 58.364 36.000 0.39 0.00 0.00 4.00
7094 11868 1.273606 CAGACACATCAGGAACCGAGT 59.726 52.381 0.00 0.00 0.00 4.18
7111 11885 2.202946 TGACGGCAACAACGCAGA 60.203 55.556 0.00 0.00 34.00 4.26
7129 11903 3.119101 AGACGGCCTTAGACATACAAGTG 60.119 47.826 0.00 0.00 0.00 3.16
7145 11919 2.018542 TTGGCTACATTGTAGACGGC 57.981 50.000 24.65 13.10 0.00 5.68
7181 11955 8.260114 ACAAAAGAAAATTTGGAGTGAAGTGAT 58.740 29.630 0.00 0.00 43.10 3.06
7230 12004 4.099266 CAGGTGAAGCAGAGTAGATTAGCT 59.901 45.833 0.00 0.00 37.08 3.32
7231 12005 4.142049 ACAGGTGAAGCAGAGTAGATTAGC 60.142 45.833 0.00 0.00 0.00 3.09
7232 12006 5.590530 ACAGGTGAAGCAGAGTAGATTAG 57.409 43.478 0.00 0.00 0.00 1.73
7233 12007 5.724328 CAACAGGTGAAGCAGAGTAGATTA 58.276 41.667 0.00 0.00 0.00 1.75
7235 12009 3.618507 GCAACAGGTGAAGCAGAGTAGAT 60.619 47.826 0.00 0.00 0.00 1.98
7772 19085 2.192664 TAAACTGCATTGAAGGCGGA 57.807 45.000 18.22 0.00 40.08 5.54
7800 19117 0.188342 ATTTTGAGGTGCCCACAGGT 59.812 50.000 0.40 0.00 34.57 4.00
7843 19160 2.258286 GAATGTGCCAACCCGTGC 59.742 61.111 0.00 0.00 0.00 5.34
7845 19162 4.079446 CAGAATGTGCCAACCCGT 57.921 55.556 0.00 0.00 0.00 5.28
7880 19197 1.165284 GCAGCCATGGAAGCTCTAGC 61.165 60.000 18.40 5.58 38.95 3.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.