Multiple sequence alignment - TraesCS7A01G464900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G464900 chr7A 100.000 4084 0 0 1 4084 661301334 661297251 0.000000e+00 7542.0
1 TraesCS7A01G464900 chr7A 85.484 62 9 0 5 66 67751778 67751839 9.480000e-07 65.8
2 TraesCS7A01G464900 chr7A 85.484 62 9 0 5 66 67755051 67755112 9.480000e-07 65.8
3 TraesCS7A01G464900 chr7B 93.231 1891 75 22 263 2127 629049309 629047446 0.000000e+00 2734.0
4 TraesCS7A01G464900 chr7B 91.048 849 62 8 2362 3200 629047151 629046307 0.000000e+00 1134.0
5 TraesCS7A01G464900 chr7B 82.114 492 60 23 3230 3709 629045970 629045495 2.960000e-106 396.0
6 TraesCS7A01G464900 chr7B 89.055 201 18 3 3 202 629069589 629069392 3.150000e-61 246.0
7 TraesCS7A01G464900 chr7B 98.980 98 1 0 2267 2364 629047371 629047274 4.200000e-40 176.0
8 TraesCS7A01G464900 chr7B 97.895 95 2 0 2116 2210 506627138 506627044 9.080000e-37 165.0
9 TraesCS7A01G464900 chr7B 98.901 91 1 0 2120 2210 107564805 107564715 3.270000e-36 163.0
10 TraesCS7A01G464900 chr7B 97.183 71 1 1 192 262 629049694 629049625 7.170000e-23 119.0
11 TraesCS7A01G464900 chr7D 91.112 1924 77 31 269 2127 572040958 572039064 0.000000e+00 2519.0
12 TraesCS7A01G464900 chr7D 92.821 989 57 7 2243 3221 572039002 572038018 0.000000e+00 1421.0
13 TraesCS7A01G464900 chr7D 92.025 326 20 3 3230 3555 572037982 572037663 1.730000e-123 453.0
14 TraesCS7A01G464900 chr7D 81.124 445 71 11 3644 4084 151012857 151012422 1.090000e-90 344.0
15 TraesCS7A01G464900 chr7D 87.571 177 10 2 103 267 572041555 572041379 1.160000e-45 195.0
16 TraesCS7A01G464900 chr7D 100.000 38 0 0 2208 2245 572039066 572039029 2.040000e-08 71.3
17 TraesCS7A01G464900 chr7D 90.476 42 4 0 3577 3618 636764517 636764476 5.700000e-04 56.5
18 TraesCS7A01G464900 chr4A 93.571 871 42 5 1073 1940 621773404 621772545 0.000000e+00 1286.0
19 TraesCS7A01G464900 chr4A 89.431 738 69 7 2376 3107 621771965 621771231 0.000000e+00 922.0
20 TraesCS7A01G464900 chr4A 96.809 94 3 0 2126 2219 418604529 418604436 1.520000e-34 158.0
21 TraesCS7A01G464900 chr5D 91.241 959 61 12 994 1940 547065563 547066510 0.000000e+00 1284.0
22 TraesCS7A01G464900 chr5D 87.001 777 90 8 2376 3145 547067151 547067923 0.000000e+00 865.0
23 TraesCS7A01G464900 chr5D 78.091 461 97 4 3625 4084 434035746 434036203 5.170000e-74 289.0
24 TraesCS7A01G464900 chr5B 92.500 880 50 10 1067 1940 690238533 690239402 0.000000e+00 1245.0
25 TraesCS7A01G464900 chr5B 88.211 738 79 6 2376 3108 690257928 690258662 0.000000e+00 874.0
26 TraesCS7A01G464900 chr5B 87.686 739 82 6 2376 3108 690239959 690240694 0.000000e+00 852.0
27 TraesCS7A01G464900 chr5B 90.957 376 33 1 1502 1876 690240981 690241356 4.710000e-139 505.0
28 TraesCS7A01G464900 chr5B 78.889 90 17 2 3068 3156 690259562 690259650 4.410000e-05 60.2
29 TraesCS7A01G464900 chr4D 77.720 772 136 29 1118 1865 499734603 499733844 1.350000e-119 440.0
30 TraesCS7A01G464900 chr4B 77.721 781 132 36 1112 1865 642925067 642924302 1.350000e-119 440.0
31 TraesCS7A01G464900 chr5A 76.675 776 143 36 1112 1865 525599735 525600494 2.960000e-106 396.0
32 TraesCS7A01G464900 chr5A 97.849 93 2 0 2118 2210 332947199 332947291 1.170000e-35 161.0
33 TraesCS7A01G464900 chr5A 100.000 87 0 0 2125 2211 580273666 580273580 1.170000e-35 161.0
34 TraesCS7A01G464900 chr1D 81.356 472 78 10 3616 4084 10376495 10376959 3.850000e-100 375.0
35 TraesCS7A01G464900 chr6A 82.232 439 72 4 3577 4013 410586564 410586130 1.390000e-99 374.0
36 TraesCS7A01G464900 chr6A 95.050 101 4 1 2110 2210 103372558 103372657 1.520000e-34 158.0
37 TraesCS7A01G464900 chr3D 80.169 474 89 4 3612 4084 539924550 539924081 2.340000e-92 350.0
38 TraesCS7A01G464900 chr6D 80.388 464 83 8 3612 4071 267726628 267727087 3.020000e-91 346.0
39 TraesCS7A01G464900 chr6D 91.743 109 5 4 2104 2210 461690099 461690205 9.150000e-32 148.0
40 TraesCS7A01G464900 chrUn 78.711 512 97 9 3577 4084 101359782 101359279 8.460000e-87 331.0
41 TraesCS7A01G464900 chr2D 80.282 426 79 5 3661 4084 524046405 524046827 2.370000e-82 316.0
42 TraesCS7A01G464900 chr2D 78.696 460 89 8 3627 4084 73463813 73464265 8.580000e-77 298.0
43 TraesCS7A01G464900 chr2A 96.939 98 2 1 2114 2210 777289265 777289168 3.270000e-36 163.0
44 TraesCS7A01G464900 chr3B 100.000 86 0 0 2125 2210 243091206 243091291 4.230000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G464900 chr7A 661297251 661301334 4083 True 7542.000000 7542 100.0000 1 4084 1 chr7A.!!$R1 4083
1 TraesCS7A01G464900 chr7B 629045495 629049694 4199 True 911.800000 2734 92.5112 192 3709 5 chr7B.!!$R4 3517
2 TraesCS7A01G464900 chr7D 572037663 572041555 3892 True 931.860000 2519 92.7058 103 3555 5 chr7D.!!$R3 3452
3 TraesCS7A01G464900 chr4A 621771231 621773404 2173 True 1104.000000 1286 91.5010 1073 3107 2 chr4A.!!$R2 2034
4 TraesCS7A01G464900 chr5D 547065563 547067923 2360 False 1074.500000 1284 89.1210 994 3145 2 chr5D.!!$F2 2151
5 TraesCS7A01G464900 chr5B 690238533 690241356 2823 False 867.333333 1245 90.3810 1067 3108 3 chr5B.!!$F1 2041
6 TraesCS7A01G464900 chr5B 690257928 690259650 1722 False 467.100000 874 83.5500 2376 3156 2 chr5B.!!$F2 780
7 TraesCS7A01G464900 chr4D 499733844 499734603 759 True 440.000000 440 77.7200 1118 1865 1 chr4D.!!$R1 747
8 TraesCS7A01G464900 chr4B 642924302 642925067 765 True 440.000000 440 77.7210 1112 1865 1 chr4B.!!$R1 753
9 TraesCS7A01G464900 chr5A 525599735 525600494 759 False 396.000000 396 76.6750 1112 1865 1 chr5A.!!$F2 753
10 TraesCS7A01G464900 chrUn 101359279 101359782 503 True 331.000000 331 78.7110 3577 4084 1 chrUn.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 1046 0.532196 CGTTTTAGGGGCTCGATCCC 60.532 60.000 16.35 16.35 45.80 3.85 F
641 1405 0.804989 GCAACTTGGACTCATTCGGG 59.195 55.000 0.00 0.00 0.00 5.14 F
1110 1914 1.205064 CGGCAAGAACAAGCTGTCG 59.795 57.895 0.00 0.00 32.54 4.35 F
2246 3099 1.872952 TGTGCACACATACTCTGCAAC 59.127 47.619 17.42 0.00 42.40 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1203 2007 0.685785 AGATGAGGAAGCCGAGCAGA 60.686 55.000 0.00 0.0 0.00 4.26 R
2453 3734 1.000060 CACAGATGGTTTGTGGCCAAG 60.000 52.381 7.24 0.0 41.66 3.61 R
2651 3932 0.036388 GAGTGTTGAAGATCGGGGCA 60.036 55.000 0.00 0.0 0.00 5.36 R
3573 6165 0.103208 GATCGGCGTTGGAGATGTCT 59.897 55.000 6.85 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.707440 TGAACACTTCTTCATTTAAAGCCA 57.293 33.333 0.00 0.00 0.00 4.75
24 25 7.288810 TGAACACTTCTTCATTTAAAGCCAT 57.711 32.000 0.00 0.00 0.00 4.40
25 26 7.370383 TGAACACTTCTTCATTTAAAGCCATC 58.630 34.615 0.00 0.00 0.00 3.51
26 27 7.231317 TGAACACTTCTTCATTTAAAGCCATCT 59.769 33.333 0.00 0.00 0.00 2.90
27 28 7.530426 ACACTTCTTCATTTAAAGCCATCTT 57.470 32.000 0.00 0.00 0.00 2.40
28 29 8.635765 ACACTTCTTCATTTAAAGCCATCTTA 57.364 30.769 0.00 0.00 31.02 2.10
29 30 9.077885 ACACTTCTTCATTTAAAGCCATCTTAA 57.922 29.630 0.00 0.00 31.02 1.85
33 34 8.931385 TCTTCATTTAAAGCCATCTTAATTGC 57.069 30.769 0.00 0.00 31.02 3.56
34 35 7.701924 TCTTCATTTAAAGCCATCTTAATTGCG 59.298 33.333 0.00 0.00 31.02 4.85
35 36 6.862209 TCATTTAAAGCCATCTTAATTGCGT 58.138 32.000 0.00 0.00 31.02 5.24
36 37 7.319646 TCATTTAAAGCCATCTTAATTGCGTT 58.680 30.769 0.00 0.00 31.81 4.84
37 38 7.816995 TCATTTAAAGCCATCTTAATTGCGTTT 59.183 29.630 0.00 0.00 30.14 3.60
38 39 7.954788 TTTAAAGCCATCTTAATTGCGTTTT 57.045 28.000 0.00 0.00 30.14 2.43
39 40 7.575332 TTAAAGCCATCTTAATTGCGTTTTC 57.425 32.000 0.00 0.00 30.14 2.29
40 41 5.391312 AAGCCATCTTAATTGCGTTTTCT 57.609 34.783 0.00 0.00 0.00 2.52
41 42 4.737054 AGCCATCTTAATTGCGTTTTCTG 58.263 39.130 0.00 0.00 0.00 3.02
42 43 4.218417 AGCCATCTTAATTGCGTTTTCTGT 59.782 37.500 0.00 0.00 0.00 3.41
43 44 4.324402 GCCATCTTAATTGCGTTTTCTGTG 59.676 41.667 0.00 0.00 0.00 3.66
44 45 5.698832 CCATCTTAATTGCGTTTTCTGTGA 58.301 37.500 0.00 0.00 0.00 3.58
45 46 6.324819 CCATCTTAATTGCGTTTTCTGTGAT 58.675 36.000 0.00 0.00 0.00 3.06
46 47 6.252015 CCATCTTAATTGCGTTTTCTGTGATG 59.748 38.462 0.00 0.00 0.00 3.07
47 48 5.153513 TCTTAATTGCGTTTTCTGTGATGC 58.846 37.500 0.00 0.00 0.00 3.91
48 49 2.352503 ATTGCGTTTTCTGTGATGCC 57.647 45.000 0.00 0.00 0.00 4.40
49 50 1.028130 TTGCGTTTTCTGTGATGCCA 58.972 45.000 0.00 0.00 0.00 4.92
50 51 1.246649 TGCGTTTTCTGTGATGCCAT 58.753 45.000 0.00 0.00 0.00 4.40
51 52 2.431454 TGCGTTTTCTGTGATGCCATA 58.569 42.857 0.00 0.00 0.00 2.74
52 53 2.816672 TGCGTTTTCTGTGATGCCATAA 59.183 40.909 0.00 0.00 0.00 1.90
53 54 3.443329 TGCGTTTTCTGTGATGCCATAAT 59.557 39.130 0.00 0.00 0.00 1.28
54 55 4.037690 GCGTTTTCTGTGATGCCATAATC 58.962 43.478 0.00 0.00 0.00 1.75
55 56 4.201950 GCGTTTTCTGTGATGCCATAATCT 60.202 41.667 0.00 0.00 0.00 2.40
56 57 5.007626 GCGTTTTCTGTGATGCCATAATCTA 59.992 40.000 0.00 0.00 0.00 1.98
57 58 6.653183 CGTTTTCTGTGATGCCATAATCTAG 58.347 40.000 0.00 0.00 0.00 2.43
58 59 6.258727 CGTTTTCTGTGATGCCATAATCTAGT 59.741 38.462 0.00 0.00 0.00 2.57
59 60 7.412853 GTTTTCTGTGATGCCATAATCTAGTG 58.587 38.462 0.00 0.00 0.00 2.74
60 61 5.219343 TCTGTGATGCCATAATCTAGTGG 57.781 43.478 0.00 0.00 38.55 4.00
84 85 5.466819 CAACATGTGCATCTCTGAAATTGT 58.533 37.500 0.00 0.00 0.00 2.71
85 86 5.306532 ACATGTGCATCTCTGAAATTGTC 57.693 39.130 0.00 0.00 0.00 3.18
86 87 4.142752 ACATGTGCATCTCTGAAATTGTCG 60.143 41.667 0.00 0.00 0.00 4.35
87 88 3.402110 TGTGCATCTCTGAAATTGTCGT 58.598 40.909 0.00 0.00 0.00 4.34
88 89 4.565022 TGTGCATCTCTGAAATTGTCGTA 58.435 39.130 0.00 0.00 0.00 3.43
89 90 4.994217 TGTGCATCTCTGAAATTGTCGTAA 59.006 37.500 0.00 0.00 0.00 3.18
90 91 5.107104 TGTGCATCTCTGAAATTGTCGTAAC 60.107 40.000 0.00 0.00 0.00 2.50
91 92 4.994217 TGCATCTCTGAAATTGTCGTAACA 59.006 37.500 0.00 0.00 0.00 2.41
92 93 5.643348 TGCATCTCTGAAATTGTCGTAACAT 59.357 36.000 0.00 0.00 34.73 2.71
93 94 6.149308 TGCATCTCTGAAATTGTCGTAACATT 59.851 34.615 0.00 0.00 34.73 2.71
94 95 6.684555 GCATCTCTGAAATTGTCGTAACATTC 59.315 38.462 0.00 0.00 34.73 2.67
95 96 6.389622 TCTCTGAAATTGTCGTAACATTCG 57.610 37.500 0.00 0.00 34.73 3.34
96 97 4.953269 TCTGAAATTGTCGTAACATTCGC 58.047 39.130 0.00 0.00 34.73 4.70
97 98 4.449405 TCTGAAATTGTCGTAACATTCGCA 59.551 37.500 0.00 0.00 34.73 5.10
98 99 5.121611 TCTGAAATTGTCGTAACATTCGCAT 59.878 36.000 0.00 0.00 34.73 4.73
99 100 5.320723 TGAAATTGTCGTAACATTCGCATC 58.679 37.500 0.00 0.00 34.73 3.91
100 101 5.121611 TGAAATTGTCGTAACATTCGCATCT 59.878 36.000 0.00 0.00 34.73 2.90
101 102 3.989705 TTGTCGTAACATTCGCATCTG 57.010 42.857 0.00 0.00 34.73 2.90
117 119 1.139498 TCTGGGCTCCATTTGGACCA 61.139 55.000 15.54 12.23 39.78 4.02
127 129 6.438425 GGCTCCATTTGGACCATATTCATATT 59.562 38.462 0.00 0.00 39.78 1.28
291 1038 6.930667 TTAACATAATCTCGTTTTAGGGGC 57.069 37.500 0.00 0.00 0.00 5.80
299 1046 0.532196 CGTTTTAGGGGCTCGATCCC 60.532 60.000 16.35 16.35 45.80 3.85
330 1077 5.009410 CAGTCAAAGTCAGCAAAGAGGAATT 59.991 40.000 0.00 0.00 0.00 2.17
333 1080 5.471456 TCAAAGTCAGCAAAGAGGAATTCTC 59.529 40.000 5.23 1.36 42.75 2.87
424 1187 4.808364 GTGATCAGACTCTTACCATGCTTC 59.192 45.833 0.00 0.00 0.00 3.86
451 1214 1.459592 GACACGCTACAAAATCGCACT 59.540 47.619 0.00 0.00 0.00 4.40
476 1239 3.963383 TTGAGAACGTTTCTTTCTGCC 57.037 42.857 0.46 0.00 40.87 4.85
589 1352 2.494530 CGGCAGGGGAGTAGAGAGC 61.495 68.421 0.00 0.00 0.00 4.09
593 1356 3.228017 GGGGAGTAGAGAGCGGGC 61.228 72.222 0.00 0.00 0.00 6.13
596 1359 2.442272 GAGTAGAGAGCGGGCCCA 60.442 66.667 24.92 0.00 0.00 5.36
598 1361 1.383248 AGTAGAGAGCGGGCCCAAT 60.383 57.895 24.92 9.50 0.00 3.16
599 1362 1.069935 GTAGAGAGCGGGCCCAATC 59.930 63.158 24.92 18.93 0.00 2.67
600 1363 2.140792 TAGAGAGCGGGCCCAATCC 61.141 63.158 24.92 12.32 0.00 3.01
601 1364 4.570874 GAGAGCGGGCCCAATCCC 62.571 72.222 24.92 5.69 43.02 3.85
641 1405 0.804989 GCAACTTGGACTCATTCGGG 59.195 55.000 0.00 0.00 0.00 5.14
712 1481 1.212751 GAATTCGTTGTGCTGCCCC 59.787 57.895 0.00 0.00 0.00 5.80
777 1548 3.408851 GTTCCGGTGTTCGTCGGC 61.409 66.667 0.00 0.00 45.31 5.54
805 1576 1.347097 CGCGTGTGTGATCAGTCCTG 61.347 60.000 0.00 0.00 0.00 3.86
808 1579 1.719600 GTGTGTGATCAGTCCTGAGC 58.280 55.000 5.63 5.63 45.44 4.26
979 1750 1.630878 AGATTCCCATTCCTATCCCGC 59.369 52.381 0.00 0.00 0.00 6.13
984 1755 1.679898 CATTCCTATCCCGCCTCCC 59.320 63.158 0.00 0.00 0.00 4.30
1110 1914 1.205064 CGGCAAGAACAAGCTGTCG 59.795 57.895 0.00 0.00 32.54 4.35
1958 2778 2.945984 AACATCACGTTGCCAGCG 59.054 55.556 0.00 0.00 36.12 5.18
2006 2836 5.177142 CAGCTATTGATCATTGTTCTCTCCG 59.823 44.000 0.00 0.00 0.00 4.63
2038 2868 7.441836 TGCGTATTTCCATGATCATTAGTAGT 58.558 34.615 5.16 0.00 0.00 2.73
2039 2869 8.581578 TGCGTATTTCCATGATCATTAGTAGTA 58.418 33.333 5.16 0.00 0.00 1.82
2040 2870 8.861101 GCGTATTTCCATGATCATTAGTAGTAC 58.139 37.037 5.16 5.36 0.00 2.73
2048 2878 8.807118 CCATGATCATTAGTAGTACTACACCAT 58.193 37.037 29.87 17.40 38.48 3.55
2124 2971 4.981806 TCCCTTTTGGCATAAAGAATCG 57.018 40.909 17.83 6.50 37.31 3.34
2125 2972 4.340617 TCCCTTTTGGCATAAAGAATCGT 58.659 39.130 17.83 0.00 37.31 3.73
2126 2973 5.502079 TCCCTTTTGGCATAAAGAATCGTA 58.498 37.500 17.83 1.75 37.31 3.43
2127 2974 5.355910 TCCCTTTTGGCATAAAGAATCGTAC 59.644 40.000 17.83 0.00 37.31 3.67
2128 2975 5.357032 CCCTTTTGGCATAAAGAATCGTACT 59.643 40.000 17.83 0.00 37.31 2.73
2129 2976 6.458342 CCCTTTTGGCATAAAGAATCGTACTC 60.458 42.308 17.83 0.00 37.31 2.59
2130 2977 6.431198 TTTTGGCATAAAGAATCGTACTCC 57.569 37.500 0.00 0.00 0.00 3.85
2131 2978 4.067972 TGGCATAAAGAATCGTACTCCC 57.932 45.455 0.00 0.00 0.00 4.30
2132 2979 3.709653 TGGCATAAAGAATCGTACTCCCT 59.290 43.478 0.00 0.00 0.00 4.20
2133 2980 4.202223 TGGCATAAAGAATCGTACTCCCTC 60.202 45.833 0.00 0.00 0.00 4.30
2134 2981 4.308265 GCATAAAGAATCGTACTCCCTCC 58.692 47.826 0.00 0.00 0.00 4.30
2135 2982 4.547532 CATAAAGAATCGTACTCCCTCCG 58.452 47.826 0.00 0.00 0.00 4.63
2136 2983 2.140839 AAGAATCGTACTCCCTCCGT 57.859 50.000 0.00 0.00 0.00 4.69
2137 2984 3.287867 AAGAATCGTACTCCCTCCGTA 57.712 47.619 0.00 0.00 0.00 4.02
2138 2985 3.287867 AGAATCGTACTCCCTCCGTAA 57.712 47.619 0.00 0.00 0.00 3.18
2139 2986 3.624777 AGAATCGTACTCCCTCCGTAAA 58.375 45.455 0.00 0.00 0.00 2.01
2140 2987 3.379688 AGAATCGTACTCCCTCCGTAAAC 59.620 47.826 0.00 0.00 0.00 2.01
2141 2988 2.496899 TCGTACTCCCTCCGTAAACT 57.503 50.000 0.00 0.00 0.00 2.66
2142 2989 3.627395 TCGTACTCCCTCCGTAAACTA 57.373 47.619 0.00 0.00 0.00 2.24
2143 2990 3.950397 TCGTACTCCCTCCGTAAACTAA 58.050 45.455 0.00 0.00 0.00 2.24
2144 2991 4.526970 TCGTACTCCCTCCGTAAACTAAT 58.473 43.478 0.00 0.00 0.00 1.73
2145 2992 5.680619 TCGTACTCCCTCCGTAAACTAATA 58.319 41.667 0.00 0.00 0.00 0.98
2146 2993 6.299141 TCGTACTCCCTCCGTAAACTAATAT 58.701 40.000 0.00 0.00 0.00 1.28
2147 2994 7.450074 TCGTACTCCCTCCGTAAACTAATATA 58.550 38.462 0.00 0.00 0.00 0.86
2148 2995 7.936847 TCGTACTCCCTCCGTAAACTAATATAA 59.063 37.037 0.00 0.00 0.00 0.98
2149 2996 8.233190 CGTACTCCCTCCGTAAACTAATATAAG 58.767 40.741 0.00 0.00 0.00 1.73
2150 2997 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2151 2998 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2152 2999 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2153 3000 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2154 3001 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2155 3002 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2156 3003 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2157 3004 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2158 3005 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2159 3006 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2206 3053 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
2245 3098 2.252976 TGTGCACACATACTCTGCAA 57.747 45.000 17.42 0.00 42.40 4.08
2246 3099 1.872952 TGTGCACACATACTCTGCAAC 59.127 47.619 17.42 0.00 42.40 4.17
2385 3660 2.621526 TGAAGCGTGACAGTACTGAAGA 59.378 45.455 29.30 9.31 0.00 2.87
2386 3661 3.255888 TGAAGCGTGACAGTACTGAAGAT 59.744 43.478 29.30 12.34 0.00 2.40
2399 3674 7.332926 ACAGTACTGAAGATATGCAAGACAAAG 59.667 37.037 29.30 0.00 0.00 2.77
2434 3715 9.738832 TTTTGTCTATAAAAAGGGTTTTCTTCG 57.261 29.630 0.00 0.00 38.01 3.79
2636 3917 4.159108 CTAGGCCTCCTCCCCCGT 62.159 72.222 9.68 0.00 34.61 5.28
2651 3932 3.095278 CGTGTGTTCGCGCTACGT 61.095 61.111 5.56 0.00 44.19 3.57
2792 4073 2.383527 GCTCCTCGAGTTTGCCACG 61.384 63.158 12.31 0.00 31.39 4.94
2795 4076 0.179067 TCCTCGAGTTTGCCACGTTT 60.179 50.000 12.31 0.00 0.00 3.60
2819 4100 2.125147 CTTCGGATCAAGCGGCCA 60.125 61.111 2.24 0.00 0.00 5.36
2998 4279 9.227777 GTATTACCTCATGAAGTTTTGTAAGGT 57.772 33.333 1.50 1.85 39.19 3.50
3029 4310 1.155424 TCAAGTTTGGCACCGTCGAC 61.155 55.000 5.18 5.18 0.00 4.20
3051 4332 2.420129 GGCGAGGGTTTGATGTATGAGT 60.420 50.000 0.00 0.00 0.00 3.41
3061 4342 4.677673 TGATGTATGAGTGTCATCAGGG 57.322 45.455 0.00 0.00 41.59 4.45
3067 4348 1.359130 TGAGTGTCATCAGGGGAGAGA 59.641 52.381 0.00 0.00 0.00 3.10
3075 4356 3.845992 TCATCAGGGGAGAGAAAATGTCA 59.154 43.478 0.00 0.00 0.00 3.58
3145 5415 2.025510 TGGTGGGTGCAATCATGACATA 60.026 45.455 0.00 0.00 0.00 2.29
3159 5436 1.339535 TGACATATTGCAAGCCGACCA 60.340 47.619 4.94 0.00 0.00 4.02
3172 5449 2.010497 GCCGACCATTTCTCTCCTTTC 58.990 52.381 0.00 0.00 0.00 2.62
3180 5457 5.948758 ACCATTTCTCTCCTTTCCTTTCATC 59.051 40.000 0.00 0.00 0.00 2.92
3181 5458 5.948162 CCATTTCTCTCCTTTCCTTTCATCA 59.052 40.000 0.00 0.00 0.00 3.07
3186 5463 2.422832 CTCCTTTCCTTTCATCAGCAGC 59.577 50.000 0.00 0.00 0.00 5.25
3211 5488 6.300902 CGTAGCGAAATAGCATTTTTCATAGC 59.699 38.462 0.00 0.00 40.15 2.97
3213 5490 6.799512 AGCGAAATAGCATTTTTCATAGCTT 58.200 32.000 0.00 0.00 40.15 3.74
3214 5491 7.930217 AGCGAAATAGCATTTTTCATAGCTTA 58.070 30.769 0.00 0.00 40.15 3.09
3215 5492 7.857885 AGCGAAATAGCATTTTTCATAGCTTAC 59.142 33.333 0.00 0.00 40.15 2.34
3222 5499 7.924940 AGCATTTTTCATAGCTTACTAGAAGC 58.075 34.615 15.13 15.13 43.31 3.86
3223 5500 7.554118 AGCATTTTTCATAGCTTACTAGAAGCA 59.446 33.333 21.30 12.17 45.30 3.91
3266 5850 6.259829 GCTTTTCTCTTATCTTGGTGGATCTC 59.740 42.308 0.00 0.00 0.00 2.75
3270 5854 5.596361 TCTCTTATCTTGGTGGATCTCTGTC 59.404 44.000 0.00 0.00 0.00 3.51
3285 5869 4.478203 TCTCTGTCTGCTGGCTAATATCT 58.522 43.478 0.00 0.00 0.00 1.98
3299 5883 7.397221 TGGCTAATATCTGATGGGTTATTCAG 58.603 38.462 0.00 0.00 0.00 3.02
3306 5890 6.373005 TCTGATGGGTTATTCAGTTCTTGA 57.627 37.500 0.00 0.00 0.00 3.02
3313 5897 4.142730 GGTTATTCAGTTCTTGAGCTGCTG 60.143 45.833 7.01 0.00 37.07 4.41
3330 5914 1.284982 CTGGGTTGTTGAGTCGAGCG 61.285 60.000 0.00 0.00 0.00 5.03
3333 5917 0.388134 GGTTGTTGAGTCGAGCGCTA 60.388 55.000 11.50 0.00 0.00 4.26
3420 6012 9.855021 GTTATGCTTTGTTTGGACTGTATATTT 57.145 29.630 0.00 0.00 0.00 1.40
3434 6026 8.969267 GGACTGTATATTTTAGACTGAATGACG 58.031 37.037 0.00 0.00 0.00 4.35
3470 6062 6.742644 GCTTCCTTATACACATGCTCCATACT 60.743 42.308 0.00 0.00 0.00 2.12
3481 6073 6.095300 CACATGCTCCATACTTTATGAAACCA 59.905 38.462 0.00 0.00 38.45 3.67
3482 6074 6.835488 ACATGCTCCATACTTTATGAAACCAT 59.165 34.615 0.00 0.00 38.45 3.55
3526 6118 7.770433 TCATAAATCTTCTATGACACCCAGTTG 59.230 37.037 0.00 0.00 32.15 3.16
3534 6126 1.984424 TGACACCCAGTTGGATCATGA 59.016 47.619 0.00 0.00 37.39 3.07
3551 6143 7.498900 TGGATCATGACTTGGTGAAACATATAC 59.501 37.037 0.00 0.00 39.98 1.47
3555 6147 8.511321 TCATGACTTGGTGAAACATATACAAAC 58.489 33.333 0.00 0.00 39.98 2.93
3556 6148 7.809546 TGACTTGGTGAAACATATACAAACA 57.190 32.000 0.00 0.00 39.98 2.83
3557 6149 8.402798 TGACTTGGTGAAACATATACAAACAT 57.597 30.769 0.00 0.00 39.98 2.71
3558 6150 8.296000 TGACTTGGTGAAACATATACAAACATG 58.704 33.333 0.00 0.00 39.98 3.21
3559 6151 8.402798 ACTTGGTGAAACATATACAAACATGA 57.597 30.769 0.00 0.00 39.98 3.07
3560 6152 9.023962 ACTTGGTGAAACATATACAAACATGAT 57.976 29.630 0.00 0.00 39.98 2.45
3561 6153 9.859427 CTTGGTGAAACATATACAAACATGATT 57.141 29.630 0.00 0.00 39.98 2.57
3562 6154 9.853555 TTGGTGAAACATATACAAACATGATTC 57.146 29.630 0.00 0.00 39.98 2.52
3563 6155 9.241919 TGGTGAAACATATACAAACATGATTCT 57.758 29.630 0.00 0.00 39.98 2.40
3570 6162 9.764363 ACATATACAAACATGATTCTACGATGT 57.236 29.630 0.00 0.00 31.54 3.06
3575 6167 8.771920 ACAAACATGATTCTACGATGTAAAGA 57.228 30.769 0.00 0.00 30.07 2.52
3591 6183 0.537188 AAGACATCTCCAACGCCGAT 59.463 50.000 0.00 0.00 0.00 4.18
3601 6193 0.953471 CAACGCCGATCCTCAAACCA 60.953 55.000 0.00 0.00 0.00 3.67
3602 6194 0.035439 AACGCCGATCCTCAAACCAT 60.035 50.000 0.00 0.00 0.00 3.55
3609 6201 2.947652 CGATCCTCAAACCATCTGCATT 59.052 45.455 0.00 0.00 0.00 3.56
3620 6226 0.752658 ATCTGCATTCGTCCGGATCA 59.247 50.000 7.81 0.00 0.00 2.92
3638 6244 4.741781 CGAAAGCCAGCCAACGCG 62.742 66.667 3.53 3.53 41.18 6.01
3657 6263 1.772182 GATTCTGTATCGGTCTGCGG 58.228 55.000 0.00 0.00 0.00 5.69
3700 6306 0.041312 CGCAAACCGGAGACAAACAG 60.041 55.000 9.46 0.00 0.00 3.16
3702 6308 1.961793 CAAACCGGAGACAAACAGGA 58.038 50.000 9.46 0.00 0.00 3.86
3754 6360 4.473520 CCCGCTTCTGACCGCCAT 62.474 66.667 0.00 0.00 0.00 4.40
3756 6362 3.197790 CGCTTCTGACCGCCATGG 61.198 66.667 7.63 7.63 46.41 3.66
3771 6377 3.909651 TGGCCCACCCAAACCTCC 61.910 66.667 0.00 0.00 41.82 4.30
3775 6381 2.763902 CCACCCAAACCTCCCTCC 59.236 66.667 0.00 0.00 0.00 4.30
3776 6382 1.852626 CCACCCAAACCTCCCTCCT 60.853 63.158 0.00 0.00 0.00 3.69
3777 6383 1.685820 CACCCAAACCTCCCTCCTC 59.314 63.158 0.00 0.00 0.00 3.71
3778 6384 1.133809 CACCCAAACCTCCCTCCTCA 61.134 60.000 0.00 0.00 0.00 3.86
3780 6386 0.842467 CCCAAACCTCCCTCCTCACT 60.842 60.000 0.00 0.00 0.00 3.41
3837 6444 3.961182 CATTCATGCCAATGTAGAGTGC 58.039 45.455 0.09 0.00 35.15 4.40
3839 6446 1.066215 TCATGCCAATGTAGAGTGCGT 60.066 47.619 0.00 0.00 35.15 5.24
3852 6459 2.027073 GTGCGTCGCTCCACATTGA 61.027 57.895 19.50 0.00 32.37 2.57
3855 6462 1.014044 GCGTCGCTCCACATTGAAGA 61.014 55.000 10.68 0.00 0.00 2.87
3856 6463 1.645034 CGTCGCTCCACATTGAAGAT 58.355 50.000 0.00 0.00 0.00 2.40
3861 6468 2.097825 GCTCCACATTGAAGATGGCTT 58.902 47.619 0.00 0.00 36.96 4.35
3865 6472 2.954318 CCACATTGAAGATGGCTTAGGG 59.046 50.000 0.00 0.00 33.61 3.53
3870 6477 1.559682 TGAAGATGGCTTAGGGTGGAC 59.440 52.381 0.00 0.00 33.61 4.02
3874 6481 4.832608 GGCTTAGGGTGGACGCGG 62.833 72.222 12.47 0.00 0.00 6.46
3889 6496 2.348998 CGGCCTTTCACTGCCTCT 59.651 61.111 0.00 0.00 45.71 3.69
3890 6497 1.596934 CGGCCTTTCACTGCCTCTA 59.403 57.895 0.00 0.00 45.71 2.43
3932 6539 3.360340 GGGCACTGTCTGCTGCAC 61.360 66.667 0.00 0.00 46.25 4.57
3933 6540 3.720193 GGCACTGTCTGCTGCACG 61.720 66.667 0.00 0.00 46.25 5.34
3937 6544 2.356673 CTGTCTGCTGCACGCTCA 60.357 61.111 0.00 0.00 40.11 4.26
3938 6545 1.957695 CTGTCTGCTGCACGCTCAA 60.958 57.895 0.00 0.00 40.11 3.02
3946 6553 0.870393 CTGCACGCTCAACTGAACAT 59.130 50.000 0.00 0.00 0.00 2.71
3948 6555 0.867746 GCACGCTCAACTGAACATGA 59.132 50.000 0.00 0.00 0.00 3.07
3963 6570 1.227380 ATGACTCCTCGCCGCATTC 60.227 57.895 0.00 0.00 0.00 2.67
3964 6571 2.956964 GACTCCTCGCCGCATTCG 60.957 66.667 0.00 0.00 0.00 3.34
3968 6575 3.913573 CCTCGCCGCATTCGAACG 61.914 66.667 0.00 0.00 38.10 3.95
3973 6580 3.564027 CCGCATTCGAACGCCTCC 61.564 66.667 11.03 0.00 38.10 4.30
3977 6584 1.295792 GCATTCGAACGCCTCCATTA 58.704 50.000 4.55 0.00 0.00 1.90
3982 6589 0.730840 CGAACGCCTCCATTAAACCC 59.269 55.000 0.00 0.00 0.00 4.11
3993 6600 1.750778 CATTAAACCCGCATGGAAGCT 59.249 47.619 0.00 0.00 37.49 3.74
3994 6601 1.173043 TTAAACCCGCATGGAAGCTG 58.827 50.000 0.00 0.00 37.49 4.24
3996 6603 0.962356 AAACCCGCATGGAAGCTGAG 60.962 55.000 0.00 0.00 37.49 3.35
4006 6613 4.880696 GCATGGAAGCTGAGAAATCTACTT 59.119 41.667 0.00 0.00 0.00 2.24
4007 6614 5.007528 GCATGGAAGCTGAGAAATCTACTTC 59.992 44.000 0.00 9.93 33.38 3.01
4015 6622 3.706594 TGAGAAATCTACTTCGGCCAGAT 59.293 43.478 2.24 0.00 0.00 2.90
4017 6624 2.246719 AATCTACTTCGGCCAGATGC 57.753 50.000 2.24 0.00 40.16 3.91
4030 6637 0.107703 CAGATGCCCGTTAAGGAGCA 60.108 55.000 6.82 6.82 45.60 4.26
4032 6639 1.440145 GATGCCCGTTAAGGAGCAGC 61.440 60.000 10.16 7.29 45.05 5.25
4034 6641 2.511600 CCCGTTAAGGAGCAGCCG 60.512 66.667 0.00 0.00 45.00 5.52
4035 6642 2.577059 CCGTTAAGGAGCAGCCGA 59.423 61.111 0.00 0.00 45.00 5.54
4036 6643 1.810030 CCGTTAAGGAGCAGCCGAC 60.810 63.158 0.00 0.00 45.00 4.79
4037 6644 1.080093 CGTTAAGGAGCAGCCGACA 60.080 57.895 0.00 0.00 43.43 4.35
4038 6645 0.460284 CGTTAAGGAGCAGCCGACAT 60.460 55.000 0.00 0.00 43.43 3.06
4040 6647 2.737359 CGTTAAGGAGCAGCCGACATTA 60.737 50.000 0.00 0.00 43.43 1.90
4043 6650 2.717639 AGGAGCAGCCGACATTAAAT 57.282 45.000 0.00 0.00 43.43 1.40
4044 6651 2.292267 AGGAGCAGCCGACATTAAATG 58.708 47.619 0.00 0.00 43.43 2.32
4048 6656 1.919918 GCAGCCGACATTAAATGCAAC 59.080 47.619 0.00 0.00 33.92 4.17
4049 6657 2.670789 GCAGCCGACATTAAATGCAACA 60.671 45.455 0.00 0.00 33.92 3.33
4057 6665 3.056250 ACATTAAATGCAACATCGGGCAA 60.056 39.130 0.00 0.00 44.20 4.52
4065 6673 2.203126 CATCGGGCAAGCTCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
4071 6679 2.683465 GGCAAGCTCCTCCCATCCA 61.683 63.158 0.00 0.00 0.00 3.41
4074 6682 2.370445 AAGCTCCTCCCATCCACCG 61.370 63.158 0.00 0.00 0.00 4.94
4078 6686 0.978146 CTCCTCCCATCCACCGTCTT 60.978 60.000 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.707440 TGGCTTTAAATGAAGAAGTGTTCA 57.293 33.333 0.00 0.00 40.68 3.18
1 2 7.597386 AGATGGCTTTAAATGAAGAAGTGTTC 58.403 34.615 0.00 0.00 0.00 3.18
2 3 7.530426 AGATGGCTTTAAATGAAGAAGTGTT 57.470 32.000 0.00 0.00 0.00 3.32
7 8 9.369904 GCAATTAAGATGGCTTTAAATGAAGAA 57.630 29.630 8.13 0.00 35.56 2.52
8 9 7.701924 CGCAATTAAGATGGCTTTAAATGAAGA 59.298 33.333 8.13 0.00 35.56 2.87
9 10 7.489113 ACGCAATTAAGATGGCTTTAAATGAAG 59.511 33.333 8.13 0.00 35.56 3.02
10 11 7.319646 ACGCAATTAAGATGGCTTTAAATGAA 58.680 30.769 8.13 0.00 35.56 2.57
11 12 6.862209 ACGCAATTAAGATGGCTTTAAATGA 58.138 32.000 8.13 0.00 35.56 2.57
12 13 7.524294 AACGCAATTAAGATGGCTTTAAATG 57.476 32.000 0.00 0.00 35.56 2.32
13 14 8.546597 AAAACGCAATTAAGATGGCTTTAAAT 57.453 26.923 0.00 0.00 35.56 1.40
14 15 7.870445 AGAAAACGCAATTAAGATGGCTTTAAA 59.130 29.630 0.00 0.00 35.56 1.52
15 16 7.328249 CAGAAAACGCAATTAAGATGGCTTTAA 59.672 33.333 0.00 0.00 35.56 1.52
16 17 6.806249 CAGAAAACGCAATTAAGATGGCTTTA 59.194 34.615 0.00 0.00 35.56 1.85
17 18 5.634859 CAGAAAACGCAATTAAGATGGCTTT 59.365 36.000 0.00 0.00 35.56 3.51
18 19 5.163513 CAGAAAACGCAATTAAGATGGCTT 58.836 37.500 0.00 0.00 38.15 4.35
19 20 4.218417 ACAGAAAACGCAATTAAGATGGCT 59.782 37.500 0.00 0.00 29.40 4.75
20 21 4.324402 CACAGAAAACGCAATTAAGATGGC 59.676 41.667 0.00 0.00 0.00 4.40
21 22 5.698832 TCACAGAAAACGCAATTAAGATGG 58.301 37.500 0.00 0.00 0.00 3.51
22 23 6.237384 GCATCACAGAAAACGCAATTAAGATG 60.237 38.462 0.00 0.00 0.00 2.90
23 24 5.801947 GCATCACAGAAAACGCAATTAAGAT 59.198 36.000 0.00 0.00 0.00 2.40
24 25 5.153513 GCATCACAGAAAACGCAATTAAGA 58.846 37.500 0.00 0.00 0.00 2.10
25 26 4.324402 GGCATCACAGAAAACGCAATTAAG 59.676 41.667 0.00 0.00 0.00 1.85
26 27 4.233789 GGCATCACAGAAAACGCAATTAA 58.766 39.130 0.00 0.00 0.00 1.40
27 28 3.254411 TGGCATCACAGAAAACGCAATTA 59.746 39.130 0.00 0.00 0.00 1.40
28 29 2.035704 TGGCATCACAGAAAACGCAATT 59.964 40.909 0.00 0.00 0.00 2.32
29 30 1.612950 TGGCATCACAGAAAACGCAAT 59.387 42.857 0.00 0.00 0.00 3.56
30 31 1.028130 TGGCATCACAGAAAACGCAA 58.972 45.000 0.00 0.00 0.00 4.85
31 32 1.246649 ATGGCATCACAGAAAACGCA 58.753 45.000 0.00 0.00 0.00 5.24
32 33 3.485947 TTATGGCATCACAGAAAACGC 57.514 42.857 1.65 0.00 0.00 4.84
33 34 5.490139 AGATTATGGCATCACAGAAAACG 57.510 39.130 1.65 0.00 0.00 3.60
34 35 7.412853 CACTAGATTATGGCATCACAGAAAAC 58.587 38.462 1.65 0.00 0.00 2.43
35 36 6.543465 CCACTAGATTATGGCATCACAGAAAA 59.457 38.462 1.65 0.00 0.00 2.29
36 37 6.057533 CCACTAGATTATGGCATCACAGAAA 58.942 40.000 1.65 0.00 0.00 2.52
37 38 5.614308 CCACTAGATTATGGCATCACAGAA 58.386 41.667 1.65 0.00 0.00 3.02
38 39 5.219343 CCACTAGATTATGGCATCACAGA 57.781 43.478 1.65 0.00 0.00 3.41
47 48 4.261322 GCACATGTTGCCACTAGATTATGG 60.261 45.833 0.00 0.00 46.63 2.74
48 49 4.852138 GCACATGTTGCCACTAGATTATG 58.148 43.478 0.00 0.00 46.63 1.90
61 62 5.466819 ACAATTTCAGAGATGCACATGTTG 58.533 37.500 0.00 0.00 0.00 3.33
62 63 5.618418 CGACAATTTCAGAGATGCACATGTT 60.618 40.000 0.00 0.00 0.00 2.71
63 64 4.142752 CGACAATTTCAGAGATGCACATGT 60.143 41.667 0.00 0.00 0.00 3.21
64 65 4.142752 ACGACAATTTCAGAGATGCACATG 60.143 41.667 0.00 0.00 0.00 3.21
65 66 4.005650 ACGACAATTTCAGAGATGCACAT 58.994 39.130 0.00 0.00 0.00 3.21
66 67 3.402110 ACGACAATTTCAGAGATGCACA 58.598 40.909 0.00 0.00 0.00 4.57
67 68 5.107104 TGTTACGACAATTTCAGAGATGCAC 60.107 40.000 0.00 0.00 31.49 4.57
68 69 4.994217 TGTTACGACAATTTCAGAGATGCA 59.006 37.500 0.00 0.00 31.49 3.96
69 70 5.530519 TGTTACGACAATTTCAGAGATGC 57.469 39.130 0.00 0.00 31.49 3.91
70 71 6.896613 CGAATGTTACGACAATTTCAGAGATG 59.103 38.462 0.00 0.00 39.66 2.90
71 72 6.455646 GCGAATGTTACGACAATTTCAGAGAT 60.456 38.462 0.00 0.00 39.66 2.75
72 73 5.163992 GCGAATGTTACGACAATTTCAGAGA 60.164 40.000 0.00 0.00 39.66 3.10
73 74 5.015733 GCGAATGTTACGACAATTTCAGAG 58.984 41.667 0.00 0.00 39.66 3.35
74 75 4.449405 TGCGAATGTTACGACAATTTCAGA 59.551 37.500 0.00 0.00 39.66 3.27
75 76 4.707563 TGCGAATGTTACGACAATTTCAG 58.292 39.130 0.00 0.00 39.66 3.02
76 77 4.733972 TGCGAATGTTACGACAATTTCA 57.266 36.364 0.00 0.00 39.66 2.69
77 78 5.449113 CAGATGCGAATGTTACGACAATTTC 59.551 40.000 0.00 0.00 39.66 2.17
78 79 5.323900 CAGATGCGAATGTTACGACAATTT 58.676 37.500 0.00 0.00 39.66 1.82
79 80 4.201812 CCAGATGCGAATGTTACGACAATT 60.202 41.667 0.00 0.00 39.66 2.32
80 81 3.309682 CCAGATGCGAATGTTACGACAAT 59.690 43.478 0.00 0.00 39.66 2.71
81 82 2.670905 CCAGATGCGAATGTTACGACAA 59.329 45.455 0.00 0.00 39.66 3.18
82 83 2.267426 CCAGATGCGAATGTTACGACA 58.733 47.619 0.00 0.00 40.71 4.35
83 84 1.593006 CCCAGATGCGAATGTTACGAC 59.407 52.381 0.00 0.00 0.00 4.34
84 85 1.934589 CCCAGATGCGAATGTTACGA 58.065 50.000 0.00 0.00 0.00 3.43
85 86 0.304705 GCCCAGATGCGAATGTTACG 59.695 55.000 0.00 0.00 0.00 3.18
86 87 1.599542 GAGCCCAGATGCGAATGTTAC 59.400 52.381 0.00 0.00 36.02 2.50
87 88 1.475034 GGAGCCCAGATGCGAATGTTA 60.475 52.381 0.00 0.00 36.02 2.41
88 89 0.749454 GGAGCCCAGATGCGAATGTT 60.749 55.000 0.00 0.00 36.02 2.71
89 90 1.153086 GGAGCCCAGATGCGAATGT 60.153 57.895 0.00 0.00 36.02 2.71
90 91 0.536687 ATGGAGCCCAGATGCGAATG 60.537 55.000 0.41 0.00 36.75 2.67
91 92 0.184451 AATGGAGCCCAGATGCGAAT 59.816 50.000 0.41 0.00 36.75 3.34
92 93 0.034186 AAATGGAGCCCAGATGCGAA 60.034 50.000 0.41 0.00 36.75 4.70
93 94 0.749091 CAAATGGAGCCCAGATGCGA 60.749 55.000 0.41 0.00 36.75 5.10
94 95 1.731433 CCAAATGGAGCCCAGATGCG 61.731 60.000 0.00 0.00 36.75 4.73
95 96 0.396139 TCCAAATGGAGCCCAGATGC 60.396 55.000 0.00 0.00 39.78 3.91
96 97 1.396653 GTCCAAATGGAGCCCAGATG 58.603 55.000 1.47 2.21 46.49 2.90
97 98 3.911719 GTCCAAATGGAGCCCAGAT 57.088 52.632 1.47 0.00 46.49 2.90
127 129 6.463360 GCCCTCTCCAAAACAATCAAAATAA 58.537 36.000 0.00 0.00 0.00 1.40
291 1038 2.095461 TGACTGAAGAGTGGGATCGAG 58.905 52.381 0.00 0.00 30.16 4.04
299 1046 3.461061 TGCTGACTTTGACTGAAGAGTG 58.539 45.455 0.00 0.00 30.16 3.51
390 1144 0.178767 TCTGATCACCGATGCCTTGG 59.821 55.000 0.00 0.00 0.00 3.61
398 1160 3.081710 TGGTAAGAGTCTGATCACCGA 57.918 47.619 0.00 0.00 0.00 4.69
402 1164 4.467438 TGAAGCATGGTAAGAGTCTGATCA 59.533 41.667 0.00 0.00 0.00 2.92
424 1187 1.483316 TTTGTAGCGTGTCACTCGTG 58.517 50.000 0.60 0.00 0.00 4.35
451 1214 6.073222 GGCAGAAAGAAACGTTCTCAATTAGA 60.073 38.462 0.00 0.00 39.61 2.10
476 1239 1.284657 GCTCATGACATCTCCGTGTG 58.715 55.000 0.00 0.00 31.16 3.82
542 1305 4.622220 GCATCTTGGAGCATGTGGAAATTT 60.622 41.667 0.00 0.00 0.00 1.82
582 1345 2.140792 GGATTGGGCCCGCTCTCTA 61.141 63.158 19.37 0.00 0.00 2.43
605 1369 2.890474 CGGAACTGATTCGGGCGG 60.890 66.667 0.00 0.00 35.48 6.13
607 1371 2.038269 TTGCGGAACTGATTCGGGC 61.038 57.895 0.00 0.00 36.06 6.13
610 1374 1.135972 CCAAGTTGCGGAACTGATTCG 60.136 52.381 23.63 9.35 41.87 3.34
712 1481 2.661594 TCGATATGCGATTTGGAGACG 58.338 47.619 0.00 0.00 45.59 4.18
739 1510 2.760374 GAGATCCACGGATTCCATGAC 58.240 52.381 0.00 0.00 34.60 3.06
784 1555 2.021584 GACTGATCACACACGCGCA 61.022 57.895 5.73 0.00 0.00 6.09
855 1626 1.459455 ATGACAGCGATCCTCTCCGG 61.459 60.000 0.00 0.00 0.00 5.14
907 1678 3.339093 GGGGAGGGGGTTGGTCTG 61.339 72.222 0.00 0.00 0.00 3.51
1085 1886 1.866853 CTTGTTCTTGCCGCCCTTCC 61.867 60.000 0.00 0.00 0.00 3.46
1110 1914 1.522580 GAAGATGAGCGGGACCAGC 60.523 63.158 8.78 8.78 0.00 4.85
1203 2007 0.685785 AGATGAGGAAGCCGAGCAGA 60.686 55.000 0.00 0.00 0.00 4.26
1557 2370 2.167219 CATGAGCACGAACGGCGAT 61.167 57.895 16.62 0.00 44.57 4.58
1958 2778 4.504858 AGTGGATCGACAGAAATGTAACC 58.495 43.478 10.69 0.00 0.00 2.85
2048 2878 6.969043 AGAACTGTTACCAAATCCATCCATA 58.031 36.000 0.00 0.00 0.00 2.74
2124 2971 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
2125 2972 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2126 2973 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
2127 2974 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2128 2975 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2129 2976 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2130 2977 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2131 2978 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2132 2979 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2133 2980 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2180 3027 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
2182 3029 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2190 3037 9.900112 AATATCCTACTCCCTCTGTAAACTAAT 57.100 33.333 0.00 0.00 0.00 1.73
2191 3038 9.144298 CAATATCCTACTCCCTCTGTAAACTAA 57.856 37.037 0.00 0.00 0.00 2.24
2192 3039 8.287350 ACAATATCCTACTCCCTCTGTAAACTA 58.713 37.037 0.00 0.00 0.00 2.24
2193 3040 7.133483 ACAATATCCTACTCCCTCTGTAAACT 58.867 38.462 0.00 0.00 0.00 2.66
2194 3041 7.362802 ACAATATCCTACTCCCTCTGTAAAC 57.637 40.000 0.00 0.00 0.00 2.01
2195 3042 7.635089 GCAACAATATCCTACTCCCTCTGTAAA 60.635 40.741 0.00 0.00 0.00 2.01
2196 3043 6.183360 GCAACAATATCCTACTCCCTCTGTAA 60.183 42.308 0.00 0.00 0.00 2.41
2197 3044 5.304614 GCAACAATATCCTACTCCCTCTGTA 59.695 44.000 0.00 0.00 0.00 2.74
2198 3045 4.101741 GCAACAATATCCTACTCCCTCTGT 59.898 45.833 0.00 0.00 0.00 3.41
2199 3046 4.101585 TGCAACAATATCCTACTCCCTCTG 59.898 45.833 0.00 0.00 0.00 3.35
2200 3047 4.298626 TGCAACAATATCCTACTCCCTCT 58.701 43.478 0.00 0.00 0.00 3.69
2201 3048 4.689612 TGCAACAATATCCTACTCCCTC 57.310 45.455 0.00 0.00 0.00 4.30
2202 3049 4.413520 ACATGCAACAATATCCTACTCCCT 59.586 41.667 0.00 0.00 0.00 4.20
2203 3050 4.718961 ACATGCAACAATATCCTACTCCC 58.281 43.478 0.00 0.00 0.00 4.30
2204 3051 5.590259 ACAACATGCAACAATATCCTACTCC 59.410 40.000 0.00 0.00 0.00 3.85
2205 3052 6.489675 CACAACATGCAACAATATCCTACTC 58.510 40.000 0.00 0.00 0.00 2.59
2206 3053 6.441093 CACAACATGCAACAATATCCTACT 57.559 37.500 0.00 0.00 0.00 2.57
2245 3098 6.881065 ACATATCTGTTACATGAACTTGCAGT 59.119 34.615 0.00 0.00 38.98 4.40
2246 3099 7.312657 ACATATCTGTTACATGAACTTGCAG 57.687 36.000 0.00 0.00 38.98 4.41
2369 3644 4.672409 TGCATATCTTCAGTACTGTCACG 58.328 43.478 21.99 9.39 0.00 4.35
2423 3702 1.202475 TGCCTTTTGCGAAGAAAACCC 60.202 47.619 1.53 0.00 45.60 4.11
2453 3734 1.000060 CACAGATGGTTTGTGGCCAAG 60.000 52.381 7.24 0.00 41.66 3.61
2555 3836 1.107538 CCGAGTAGAGGCCGATGGAA 61.108 60.000 0.00 0.00 0.00 3.53
2588 3869 2.401766 AAGAAGCTGGAATGCCGCG 61.402 57.895 0.00 0.00 38.28 6.46
2636 3917 3.399770 GCACGTAGCGCGAACACA 61.400 61.111 12.10 0.00 44.77 3.72
2651 3932 0.036388 GAGTGTTGAAGATCGGGGCA 60.036 55.000 0.00 0.00 0.00 5.36
2657 3938 1.630878 ACCCAGGGAGTGTTGAAGATC 59.369 52.381 14.54 0.00 0.00 2.75
2792 4073 1.808411 TGATCCGAAGCCAGACAAAC 58.192 50.000 0.00 0.00 0.00 2.93
2795 4076 0.391661 GCTTGATCCGAAGCCAGACA 60.392 55.000 6.52 0.00 42.23 3.41
2819 4100 2.123854 TAGGGGCGCGACATCTCT 60.124 61.111 17.00 8.01 0.00 3.10
3029 4310 0.937304 CATACATCAAACCCTCGCCG 59.063 55.000 0.00 0.00 0.00 6.46
3051 4332 3.588842 ACATTTTCTCTCCCCTGATGACA 59.411 43.478 0.00 0.00 0.00 3.58
3061 4342 5.049129 CCTCAAACACTGACATTTTCTCTCC 60.049 44.000 0.00 0.00 0.00 3.71
3067 4348 4.466015 ACAACCCTCAAACACTGACATTTT 59.534 37.500 0.00 0.00 0.00 1.82
3075 4356 4.137543 GAGAATCACAACCCTCAAACACT 58.862 43.478 0.00 0.00 33.17 3.55
3109 4390 3.517500 ACCCACCAAATCAGTGTTGTTTT 59.482 39.130 0.00 0.00 33.20 2.43
3145 5415 1.474077 GAGAAATGGTCGGCTTGCAAT 59.526 47.619 0.00 0.00 0.00 3.56
3159 5436 5.651576 GCTGATGAAAGGAAAGGAGAGAAAT 59.348 40.000 0.00 0.00 0.00 2.17
3172 5449 0.654683 GCTACGCTGCTGATGAAAGG 59.345 55.000 0.00 0.00 0.00 3.11
3180 5457 0.230769 GCTATTTCGCTACGCTGCTG 59.769 55.000 0.00 0.00 0.00 4.41
3181 5458 0.179111 TGCTATTTCGCTACGCTGCT 60.179 50.000 0.00 0.00 0.00 4.24
3186 5463 6.300902 GCTATGAAAAATGCTATTTCGCTACG 59.699 38.462 5.43 0.00 39.17 3.51
3217 5494 8.319881 AGCAATGATATGTACTCATATGCTTCT 58.680 33.333 17.54 6.44 44.36 2.85
3219 5496 8.859236 AAGCAATGATATGTACTCATATGCTT 57.141 30.769 22.59 22.59 44.36 3.91
3220 5497 8.859236 AAAGCAATGATATGTACTCATATGCT 57.141 30.769 17.54 17.54 44.36 3.79
3221 5498 9.552114 GAAAAGCAATGATATGTACTCATATGC 57.448 33.333 15.20 15.20 44.36 3.14
3225 5502 9.624373 AAGAGAAAAGCAATGATATGTACTCAT 57.376 29.630 0.00 0.00 38.00 2.90
3252 5836 2.170187 GCAGACAGAGATCCACCAAGAT 59.830 50.000 0.00 0.00 0.00 2.40
3266 5850 4.597404 TCAGATATTAGCCAGCAGACAG 57.403 45.455 0.00 0.00 0.00 3.51
3270 5854 3.008813 ACCCATCAGATATTAGCCAGCAG 59.991 47.826 0.00 0.00 0.00 4.24
3285 5869 4.943705 GCTCAAGAACTGAATAACCCATCA 59.056 41.667 0.00 0.00 32.17 3.07
3299 5883 0.595095 CAACCCAGCAGCTCAAGAAC 59.405 55.000 0.00 0.00 0.00 3.01
3306 5890 0.536006 GACTCAACAACCCAGCAGCT 60.536 55.000 0.00 0.00 0.00 4.24
3313 5897 2.668280 GCGCTCGACTCAACAACCC 61.668 63.158 0.00 0.00 0.00 4.11
3330 5914 5.582689 AACATAACCAGCAAAAGGATAGC 57.417 39.130 0.00 0.00 0.00 2.97
3333 5917 7.066307 AGAAAAACATAACCAGCAAAAGGAT 57.934 32.000 0.00 0.00 0.00 3.24
3420 6012 3.181490 CCATCGACCGTCATTCAGTCTAA 60.181 47.826 0.00 0.00 0.00 2.10
3421 6013 2.357952 CCATCGACCGTCATTCAGTCTA 59.642 50.000 0.00 0.00 0.00 2.59
3422 6014 1.135139 CCATCGACCGTCATTCAGTCT 59.865 52.381 0.00 0.00 0.00 3.24
3423 6015 1.135083 ACCATCGACCGTCATTCAGTC 60.135 52.381 0.00 0.00 0.00 3.51
3428 6020 1.112113 AGCTACCATCGACCGTCATT 58.888 50.000 0.00 0.00 0.00 2.57
3434 6026 4.280174 TGTATAAGGAAGCTACCATCGACC 59.720 45.833 0.00 0.00 0.00 4.79
3526 6118 6.949352 ATATGTTTCACCAAGTCATGATCC 57.051 37.500 0.00 0.00 0.00 3.36
3534 6126 8.402798 TCATGTTTGTATATGTTTCACCAAGT 57.597 30.769 0.00 0.00 0.00 3.16
3551 6143 8.655970 TGTCTTTACATCGTAGAATCATGTTTG 58.344 33.333 0.00 0.00 43.58 2.93
3568 6160 2.695359 GGCGTTGGAGATGTCTTTACA 58.305 47.619 0.00 0.00 40.69 2.41
3569 6161 1.659098 CGGCGTTGGAGATGTCTTTAC 59.341 52.381 0.00 0.00 0.00 2.01
3570 6162 1.546923 TCGGCGTTGGAGATGTCTTTA 59.453 47.619 6.85 0.00 0.00 1.85
3571 6163 0.320374 TCGGCGTTGGAGATGTCTTT 59.680 50.000 6.85 0.00 0.00 2.52
3572 6164 0.537188 ATCGGCGTTGGAGATGTCTT 59.463 50.000 6.85 0.00 0.00 3.01
3573 6165 0.103208 GATCGGCGTTGGAGATGTCT 59.897 55.000 6.85 0.00 0.00 3.41
3574 6166 0.876342 GGATCGGCGTTGGAGATGTC 60.876 60.000 6.85 0.00 0.00 3.06
3575 6167 1.144057 GGATCGGCGTTGGAGATGT 59.856 57.895 6.85 0.00 0.00 3.06
3591 6183 2.290260 ACGAATGCAGATGGTTTGAGGA 60.290 45.455 0.00 0.00 0.00 3.71
3601 6193 0.752658 TGATCCGGACGAATGCAGAT 59.247 50.000 6.12 0.00 0.00 2.90
3602 6194 0.179111 GTGATCCGGACGAATGCAGA 60.179 55.000 6.12 0.00 0.00 4.26
3609 6201 1.153901 GCTTTCGTGATCCGGACGA 60.154 57.895 6.12 10.04 43.83 4.20
3620 6226 3.660111 GCGTTGGCTGGCTTTCGT 61.660 61.111 2.00 0.00 35.83 3.85
3638 6244 1.772182 CCGCAGACCGATACAGAATC 58.228 55.000 0.00 0.00 40.02 2.52
3665 6271 1.221466 TGCGGAAGAAAGCGTGTCTG 61.221 55.000 0.00 0.00 35.87 3.51
3666 6272 0.531974 TTGCGGAAGAAAGCGTGTCT 60.532 50.000 0.00 0.00 35.87 3.41
3717 6323 2.750637 TGAGAGCGGTCCGGACTC 60.751 66.667 32.52 22.43 0.00 3.36
3728 6334 4.443266 AGAAGCGGGCGTGAGAGC 62.443 66.667 0.00 0.00 0.00 4.09
3731 6337 2.811317 GTCAGAAGCGGGCGTGAG 60.811 66.667 0.00 0.00 0.00 3.51
3753 6359 2.445155 GAGGTTTGGGTGGGCCAT 59.555 61.111 10.70 0.00 36.17 4.40
3754 6360 3.909651 GGAGGTTTGGGTGGGCCA 61.910 66.667 0.00 0.00 36.17 5.36
3756 6362 3.585525 GAGGGAGGTTTGGGTGGGC 62.586 68.421 0.00 0.00 0.00 5.36
3761 6367 0.842467 AGTGAGGAGGGAGGTTTGGG 60.842 60.000 0.00 0.00 0.00 4.12
3767 6373 2.443016 CGGGAGTGAGGAGGGAGG 60.443 72.222 0.00 0.00 0.00 4.30
3768 6374 3.151022 GCGGGAGTGAGGAGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
3826 6433 0.179134 GGAGCGACGCACTCTACATT 60.179 55.000 23.70 0.00 34.46 2.71
3827 6434 1.313091 TGGAGCGACGCACTCTACAT 61.313 55.000 23.70 0.00 34.46 2.29
3828 6435 1.969589 TGGAGCGACGCACTCTACA 60.970 57.895 23.70 4.95 34.46 2.74
3835 6442 1.291184 CTTCAATGTGGAGCGACGCA 61.291 55.000 23.70 0.00 35.05 5.24
3837 6444 1.325640 CATCTTCAATGTGGAGCGACG 59.674 52.381 0.00 0.00 0.00 5.12
3839 6446 2.013563 GCCATCTTCAATGTGGAGCGA 61.014 52.381 0.00 0.00 34.94 4.93
3852 6459 0.541863 CGTCCACCCTAAGCCATCTT 59.458 55.000 0.00 0.00 36.35 2.40
3855 6462 2.590092 GCGTCCACCCTAAGCCAT 59.410 61.111 0.00 0.00 0.00 4.40
3856 6463 4.077184 CGCGTCCACCCTAAGCCA 62.077 66.667 0.00 0.00 0.00 4.75
3865 6472 3.723348 GTGAAAGGCCGCGTCCAC 61.723 66.667 9.68 0.00 0.00 4.02
3874 6481 0.324943 TGGTAGAGGCAGTGAAAGGC 59.675 55.000 0.00 0.00 0.00 4.35
3878 6485 3.869912 GCTTCAATGGTAGAGGCAGTGAA 60.870 47.826 0.00 0.00 37.93 3.18
3889 6496 3.192230 CGCGCCGCTTCAATGGTA 61.192 61.111 7.78 0.00 0.00 3.25
3932 6539 1.728971 GGAGTCATGTTCAGTTGAGCG 59.271 52.381 0.00 0.00 0.00 5.03
3933 6540 2.999355 GAGGAGTCATGTTCAGTTGAGC 59.001 50.000 0.00 0.00 0.00 4.26
3937 6544 1.338200 GGCGAGGAGTCATGTTCAGTT 60.338 52.381 0.00 0.00 0.00 3.16
3938 6545 0.247736 GGCGAGGAGTCATGTTCAGT 59.752 55.000 0.00 0.00 0.00 3.41
3946 6553 2.184322 GAATGCGGCGAGGAGTCA 59.816 61.111 12.98 0.00 35.33 3.41
3948 6555 3.001902 TTCGAATGCGGCGAGGAGT 62.002 57.895 12.98 0.00 39.14 3.85
3963 6570 0.730840 GGGTTTAATGGAGGCGTTCG 59.269 55.000 0.00 0.00 0.00 3.95
3964 6571 0.730840 CGGGTTTAATGGAGGCGTTC 59.269 55.000 0.00 0.00 0.00 3.95
3968 6575 0.385390 CATGCGGGTTTAATGGAGGC 59.615 55.000 0.00 0.00 0.00 4.70
3973 6580 1.750778 AGCTTCCATGCGGGTTTAATG 59.249 47.619 0.00 0.00 38.11 1.90
3977 6584 0.962356 CTCAGCTTCCATGCGGGTTT 60.962 55.000 0.00 0.00 38.11 3.27
3982 6589 2.286872 AGATTTCTCAGCTTCCATGCG 58.713 47.619 0.00 0.00 38.13 4.73
3993 6600 3.096852 TCTGGCCGAAGTAGATTTCTCA 58.903 45.455 0.00 0.00 0.00 3.27
3994 6601 3.802948 TCTGGCCGAAGTAGATTTCTC 57.197 47.619 0.00 0.00 0.00 2.87
3996 6603 2.545946 GCATCTGGCCGAAGTAGATTTC 59.454 50.000 0.00 0.00 36.11 2.17
4015 6622 2.046314 GCTGCTCCTTAACGGGCA 60.046 61.111 0.00 0.00 36.86 5.36
4017 6624 2.511600 CGGCTGCTCCTTAACGGG 60.512 66.667 0.00 0.00 0.00 5.28
4023 6630 2.489938 TTTAATGTCGGCTGCTCCTT 57.510 45.000 0.00 0.00 0.00 3.36
4025 6632 1.268743 GCATTTAATGTCGGCTGCTCC 60.269 52.381 6.81 0.00 0.00 4.70
4030 6637 3.487376 CGATGTTGCATTTAATGTCGGCT 60.487 43.478 6.81 0.00 0.00 5.52
4032 6639 3.362295 CCGATGTTGCATTTAATGTCGG 58.638 45.455 15.82 15.82 40.93 4.79
4034 6641 3.115554 GCCCGATGTTGCATTTAATGTC 58.884 45.455 6.81 0.23 0.00 3.06
4035 6642 2.495270 TGCCCGATGTTGCATTTAATGT 59.505 40.909 6.81 0.00 31.31 2.71
4036 6643 3.162202 TGCCCGATGTTGCATTTAATG 57.838 42.857 0.00 0.00 31.31 1.90
4037 6644 3.784338 CTTGCCCGATGTTGCATTTAAT 58.216 40.909 0.00 0.00 37.33 1.40
4038 6645 2.673610 GCTTGCCCGATGTTGCATTTAA 60.674 45.455 0.00 0.00 37.33 1.52
4040 6647 0.390209 GCTTGCCCGATGTTGCATTT 60.390 50.000 0.00 0.00 37.33 2.32
4043 6650 2.282391 AGCTTGCCCGATGTTGCA 60.282 55.556 0.00 0.00 35.27 4.08
4044 6651 2.486966 GAGCTTGCCCGATGTTGC 59.513 61.111 0.00 0.00 0.00 4.17
4048 6656 2.203126 GGAGGAGCTTGCCCGATG 60.203 66.667 0.00 0.00 0.00 3.84
4049 6657 3.483869 GGGAGGAGCTTGCCCGAT 61.484 66.667 4.03 0.00 31.06 4.18
4057 6665 2.765807 CGGTGGATGGGAGGAGCT 60.766 66.667 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.