Multiple sequence alignment - TraesCS7A01G461200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G461200 chr7A 100.000 3223 0 0 1 3223 657372833 657376055 0.000000e+00 5952.0
1 TraesCS7A01G461200 chr7A 100.000 2817 0 0 3605 6421 657376437 657379253 0.000000e+00 5203.0
2 TraesCS7A01G461200 chr7A 87.397 1460 144 24 3940 5364 692627247 692628701 0.000000e+00 1640.0
3 TraesCS7A01G461200 chr7A 95.652 230 10 0 1209 1438 692626939 692627168 2.830000e-98 370.0
4 TraesCS7A01G461200 chr7A 87.793 213 23 2 3605 3814 215127832 215127620 4.970000e-61 246.0
5 TraesCS7A01G461200 chr7A 77.848 158 29 4 2211 2367 13377033 13377185 6.850000e-15 93.5
6 TraesCS7A01G461200 chr7D 94.411 1825 64 12 3819 5631 568622737 568624535 0.000000e+00 2771.0
7 TraesCS7A01G461200 chr7D 86.694 1458 152 23 3943 5364 600838486 600837035 0.000000e+00 1580.0
8 TraesCS7A01G461200 chr7D 91.083 785 37 18 812 1574 568619120 568619893 0.000000e+00 1031.0
9 TraesCS7A01G461200 chr7D 85.294 748 87 11 1 735 568618242 568618979 0.000000e+00 750.0
10 TraesCS7A01G461200 chr7D 92.958 497 26 3 5711 6199 568626070 568626565 0.000000e+00 715.0
11 TraesCS7A01G461200 chr7D 88.434 562 41 15 2665 3223 236005775 236006315 0.000000e+00 656.0
12 TraesCS7A01G461200 chr7D 86.133 512 53 13 4856 5364 600841667 600842163 2.630000e-148 536.0
13 TraesCS7A01G461200 chr7D 86.083 503 38 13 1728 2211 568619968 568620457 4.440000e-141 512.0
14 TraesCS7A01G461200 chr7D 83.023 430 50 15 1018 1439 600839001 600838587 1.020000e-97 368.0
15 TraesCS7A01G461200 chr7D 95.089 224 11 0 6198 6421 596602589 596602366 2.850000e-93 353.0
16 TraesCS7A01G461200 chr7D 87.143 210 25 2 3605 3813 613762223 613762015 2.990000e-58 237.0
17 TraesCS7A01G461200 chr7D 79.916 239 46 2 2366 2604 32703662 32703426 2.380000e-39 174.0
18 TraesCS7A01G461200 chr7D 74.850 167 32 8 2208 2365 38704552 38704717 4.150000e-07 67.6
19 TraesCS7A01G461200 chr7D 92.105 38 3 0 107 144 403542782 403542819 3.000000e-03 54.7
20 TraesCS7A01G461200 chr7B 94.492 1634 74 10 3815 5441 624470314 624468690 0.000000e+00 2505.0
21 TraesCS7A01G461200 chr7B 87.666 1281 81 29 881 2112 624474673 624473421 0.000000e+00 1419.0
22 TraesCS7A01G461200 chr7B 82.695 757 85 32 1 742 624475802 624475077 1.170000e-176 630.0
23 TraesCS7A01G461200 chr7B 84.112 428 64 3 2211 2637 624473245 624472821 1.670000e-110 411.0
24 TraesCS7A01G461200 chr7B 94.366 71 4 0 812 882 624474769 624474699 6.810000e-20 110.0
25 TraesCS7A01G461200 chr3B 87.294 787 63 10 5442 6195 3612254 3611472 0.000000e+00 865.0
26 TraesCS7A01G461200 chr3B 87.166 787 64 10 5442 6195 5224438 5225220 0.000000e+00 859.0
27 TraesCS7A01G461200 chr3B 85.520 221 32 0 5044 5264 59342941 59343161 1.390000e-56 231.0
28 TraesCS7A01G461200 chr3B 85.520 221 32 0 5044 5264 782242033 782242253 1.390000e-56 231.0
29 TraesCS7A01G461200 chr3B 89.091 110 12 0 2394 2503 801163073 801162964 3.120000e-28 137.0
30 TraesCS7A01G461200 chr3B 100.000 29 0 0 117 145 611141677 611141649 3.000000e-03 54.7
31 TraesCS7A01G461200 chr2A 92.391 552 33 9 2677 3223 58397244 58397791 0.000000e+00 778.0
32 TraesCS7A01G461200 chr2A 94.737 228 11 1 6194 6421 749749724 749749498 2.850000e-93 353.0
33 TraesCS7A01G461200 chr2A 90.141 213 19 2 3605 3816 58398074 58398285 6.340000e-70 276.0
34 TraesCS7A01G461200 chr2A 92.647 68 5 0 2665 2732 694778817 694778884 1.470000e-16 99.0
35 TraesCS7A01G461200 chr2A 89.474 57 5 1 5554 5609 737383161 737383105 3.210000e-08 71.3
36 TraesCS7A01G461200 chrUn 90.553 561 41 10 2667 3223 308644466 308643914 0.000000e+00 732.0
37 TraesCS7A01G461200 chrUn 77.686 121 23 4 4949 5067 100090888 100091006 3.210000e-08 71.3
38 TraesCS7A01G461200 chr6A 90.553 561 41 10 2667 3223 607136881 607136329 0.000000e+00 732.0
39 TraesCS7A01G461200 chr6A 90.000 500 38 9 2727 3223 607275233 607274743 2.530000e-178 636.0
40 TraesCS7A01G461200 chr6A 92.453 212 13 2 3605 3814 119767937 119767727 3.760000e-77 300.0
41 TraesCS7A01G461200 chr6A 82.258 186 26 6 2421 2603 532155597 532155416 3.100000e-33 154.0
42 TraesCS7A01G461200 chr6A 76.613 248 54 4 4099 4344 21636310 21636065 4.040000e-27 134.0
43 TraesCS7A01G461200 chr1D 90.409 563 42 9 2665 3223 228042888 228043442 0.000000e+00 730.0
44 TraesCS7A01G461200 chr1D 89.100 211 22 1 3605 3814 50288070 50288280 1.780000e-65 261.0
45 TraesCS7A01G461200 chr1D 87.500 216 21 3 3605 3814 467126721 467126936 1.790000e-60 244.0
46 TraesCS7A01G461200 chr1D 80.786 229 37 5 2373 2598 457092782 457092558 8.560000e-39 172.0
47 TraesCS7A01G461200 chr5B 88.909 559 49 10 2668 3223 513961708 513962256 0.000000e+00 676.0
48 TraesCS7A01G461200 chr5B 88.626 211 23 1 3605 3814 513962537 513962747 8.260000e-64 255.0
49 TraesCS7A01G461200 chr5B 86.256 211 28 1 3605 3814 43803635 43803425 1.800000e-55 228.0
50 TraesCS7A01G461200 chr5A 88.750 560 47 12 2665 3223 537671327 537671871 0.000000e+00 671.0
51 TraesCS7A01G461200 chr5A 76.571 175 31 7 5440 5609 512077910 512077741 3.190000e-13 87.9
52 TraesCS7A01G461200 chr5A 78.512 121 22 4 4949 5067 658990570 658990688 6.900000e-10 76.8
53 TraesCS7A01G461200 chr5A 84.848 66 4 4 117 179 520241366 520241428 1.930000e-05 62.1
54 TraesCS7A01G461200 chr1A 87.389 563 60 9 2665 3223 17250418 17249863 2.530000e-178 636.0
55 TraesCS7A01G461200 chr1A 86.878 221 29 0 5044 5264 34926050 34926270 1.380000e-61 248.0
56 TraesCS7A01G461200 chr1A 80.612 294 44 11 2382 2669 291982094 291981808 1.400000e-51 215.0
57 TraesCS7A01G461200 chr1A 77.778 297 52 9 2374 2669 248361569 248361852 3.080000e-38 171.0
58 TraesCS7A01G461200 chr1A 75.723 173 31 8 5442 5609 464921272 464921106 6.900000e-10 76.8
59 TraesCS7A01G461200 chr6D 95.536 224 10 0 6198 6421 37716186 37715963 6.120000e-95 359.0
60 TraesCS7A01G461200 chr6D 87.500 192 17 4 5442 5631 53616119 53615933 1.400000e-51 215.0
61 TraesCS7A01G461200 chr6D 78.616 159 24 5 21 177 58004427 58004277 5.300000e-16 97.1
62 TraesCS7A01G461200 chr6D 76.301 173 29 10 5443 5609 266396101 266395935 1.480000e-11 82.4
63 TraesCS7A01G461200 chr3D 95.536 224 10 0 6198 6421 167372442 167372219 6.120000e-95 359.0
64 TraesCS7A01G461200 chr3D 95.536 224 10 0 6198 6421 509240854 509240631 6.120000e-95 359.0
65 TraesCS7A01G461200 chr2D 95.536 224 10 0 6198 6421 313653593 313653370 6.120000e-95 359.0
66 TraesCS7A01G461200 chr2D 95.089 224 11 0 6198 6421 119779792 119780015 2.850000e-93 353.0
67 TraesCS7A01G461200 chr2D 78.698 169 29 5 2200 2367 462478246 462478084 8.800000e-19 106.0
68 TraesCS7A01G461200 chr2D 87.302 63 8 0 117 179 395303363 395303301 8.930000e-09 73.1
69 TraesCS7A01G461200 chr5D 95.089 224 11 0 6198 6421 278352067 278352290 2.850000e-93 353.0
70 TraesCS7A01G461200 chr5D 95.089 224 11 0 6198 6421 369336400 369336623 2.850000e-93 353.0
71 TraesCS7A01G461200 chr6B 87.330 221 28 0 5044 5264 27921806 27922026 2.970000e-63 254.0
72 TraesCS7A01G461200 chr6B 88.835 206 22 1 3605 3809 554344483 554344688 1.070000e-62 252.0
73 TraesCS7A01G461200 chr6B 75.568 176 29 9 5441 5609 525173959 525173791 2.480000e-09 75.0
74 TraesCS7A01G461200 chr2B 85.581 215 31 0 5044 5258 8239977 8240191 6.480000e-55 226.0
75 TraesCS7A01G461200 chr2B 88.333 60 5 2 120 179 682572080 682572023 3.210000e-08 71.3
76 TraesCS7A01G461200 chr4A 82.511 223 33 5 2392 2613 237098293 237098076 2.360000e-44 191.0
77 TraesCS7A01G461200 chr3A 80.913 241 45 1 2365 2604 199126451 199126691 8.500000e-44 189.0
78 TraesCS7A01G461200 chr4D 77.457 173 28 8 5443 5609 477149040 477148873 6.850000e-15 93.5
79 TraesCS7A01G461200 chr4B 78.899 109 19 4 4961 5067 672128564 672128458 3.210000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G461200 chr7A 657372833 657379253 6420 False 5577.5 5952 100.0000 1 6421 2 chr7A.!!$F2 6420
1 TraesCS7A01G461200 chr7A 692626939 692628701 1762 False 1005.0 1640 91.5245 1209 5364 2 chr7A.!!$F3 4155
2 TraesCS7A01G461200 chr7D 568618242 568626565 8323 False 1155.8 2771 89.9658 1 6199 5 chr7D.!!$F5 6198
3 TraesCS7A01G461200 chr7D 600837035 600839001 1966 True 974.0 1580 84.8585 1018 5364 2 chr7D.!!$R4 4346
4 TraesCS7A01G461200 chr7D 236005775 236006315 540 False 656.0 656 88.4340 2665 3223 1 chr7D.!!$F2 558
5 TraesCS7A01G461200 chr7B 624468690 624475802 7112 True 1015.0 2505 88.6662 1 5441 5 chr7B.!!$R1 5440
6 TraesCS7A01G461200 chr3B 3611472 3612254 782 True 865.0 865 87.2940 5442 6195 1 chr3B.!!$R1 753
7 TraesCS7A01G461200 chr3B 5224438 5225220 782 False 859.0 859 87.1660 5442 6195 1 chr3B.!!$F1 753
8 TraesCS7A01G461200 chr2A 58397244 58398285 1041 False 527.0 778 91.2660 2677 3816 2 chr2A.!!$F2 1139
9 TraesCS7A01G461200 chrUn 308643914 308644466 552 True 732.0 732 90.5530 2667 3223 1 chrUn.!!$R1 556
10 TraesCS7A01G461200 chr6A 607136329 607136881 552 True 732.0 732 90.5530 2667 3223 1 chr6A.!!$R4 556
11 TraesCS7A01G461200 chr1D 228042888 228043442 554 False 730.0 730 90.4090 2665 3223 1 chr1D.!!$F2 558
12 TraesCS7A01G461200 chr5B 513961708 513962747 1039 False 465.5 676 88.7675 2668 3814 2 chr5B.!!$F1 1146
13 TraesCS7A01G461200 chr5A 537671327 537671871 544 False 671.0 671 88.7500 2665 3223 1 chr5A.!!$F2 558
14 TraesCS7A01G461200 chr1A 17249863 17250418 555 True 636.0 636 87.3890 2665 3223 1 chr1A.!!$R1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
267 274 0.040351 CTCCTCCTCTGACACCTCCA 59.960 60.000 0.00 0.00 0.00 3.86 F
1703 2031 0.038159 AAACTCGCCGGAGAGACAAG 60.038 55.000 37.54 15.48 43.27 3.16 F
2604 3075 0.105593 CGATCCCAGCAGCTACATGT 59.894 55.000 2.69 2.69 0.00 3.21 F
2660 3131 0.680618 ACACCAAACCGTCGTCCATA 59.319 50.000 0.00 0.00 0.00 2.74 F
3740 6303 1.344438 TGAAACCAGCACAGATCTCGT 59.656 47.619 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1719 2047 0.103208 AGAATCTTCTACTGCCGGCG 59.897 55.000 23.90 18.98 35.34 6.46 R
2639 3110 0.032403 TGGACGACGGTTTGGTGTAG 59.968 55.000 0.00 0.00 0.00 2.74 R
4301 6942 0.179161 CCACGTAGAAGAGCACGAGG 60.179 60.000 0.62 0.00 41.32 4.63 R
5329 8021 4.552365 CGCCGGCCACCATCTCAT 62.552 66.667 23.46 0.00 0.00 2.90 R
6097 10255 0.108377 ACTCGGTATCGCATGCAACA 60.108 50.000 19.57 0.28 36.13 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.820871 AATGCTGACTCCTCGTCCTC 59.179 55.000 0.00 0.00 42.13 3.71
39 40 2.100603 CTCGTCCTTCTCGTCCGC 59.899 66.667 0.00 0.00 0.00 5.54
40 41 2.670592 TCGTCCTTCTCGTCCGCA 60.671 61.111 0.00 0.00 0.00 5.69
90 91 1.296392 CCTCGTGGATGAAGTGGCA 59.704 57.895 0.00 0.00 34.57 4.92
115 116 4.148825 GCCACCGTCGCCTCAGAT 62.149 66.667 0.00 0.00 0.00 2.90
122 123 0.877649 CGTCGCCTCAGATTGGATGG 60.878 60.000 0.00 0.00 0.00 3.51
180 181 2.496817 GGCGAGCTCGAACTCCAT 59.503 61.111 38.74 0.00 43.02 3.41
185 186 1.402852 CGAGCTCGAACTCCATCAACA 60.403 52.381 32.06 0.00 43.02 3.33
217 218 0.465097 CTGAATTCGGCCTGCTCCAT 60.465 55.000 0.00 0.00 0.00 3.41
236 237 1.811266 CATTGACGCCACCTCCTCG 60.811 63.158 0.00 0.00 0.00 4.63
257 264 1.153127 CGACGTAGGCTCCTCCTCT 60.153 63.158 0.00 0.00 43.20 3.69
258 265 1.440938 CGACGTAGGCTCCTCCTCTG 61.441 65.000 0.00 0.00 43.20 3.35
267 274 0.040351 CTCCTCCTCTGACACCTCCA 59.960 60.000 0.00 0.00 0.00 3.86
283 290 2.476199 CTCCACCTCTTCCATCTCCTT 58.524 52.381 0.00 0.00 0.00 3.36
327 337 2.423446 GAGGCAGGCCGACCATAG 59.577 66.667 18.11 0.00 41.95 2.23
328 338 3.816367 GAGGCAGGCCGACCATAGC 62.816 68.421 18.11 5.59 41.95 2.97
329 339 4.175337 GGCAGGCCGACCATAGCA 62.175 66.667 11.86 0.00 39.06 3.49
348 362 0.251474 ATGGTGCAGTGTGCCTCAAT 60.251 50.000 0.00 0.00 44.23 2.57
349 363 0.399833 TGGTGCAGTGTGCCTCAATA 59.600 50.000 0.00 0.00 44.23 1.90
374 388 1.426423 CATCTTCGCATGGATCTCCG 58.574 55.000 0.00 0.00 39.43 4.63
463 477 1.470098 CGAGCTCAAATTGGAAGTGGG 59.530 52.381 15.40 0.00 0.00 4.61
518 532 1.068434 GAAGCGAGAGGAGGAGAATGG 59.932 57.143 0.00 0.00 0.00 3.16
542 556 3.404773 GGCTAGGGTTGCCTCACT 58.595 61.111 0.00 0.00 46.38 3.41
557 571 3.869065 CCTCACTGTCCGGCTTAAATAA 58.131 45.455 0.00 0.00 0.00 1.40
559 573 4.504858 CTCACTGTCCGGCTTAAATAACT 58.495 43.478 0.00 0.00 0.00 2.24
561 575 4.000988 CACTGTCCGGCTTAAATAACTGT 58.999 43.478 0.00 0.00 0.00 3.55
574 588 7.041372 GCTTAAATAACTGTGTTTGACCTCTCA 60.041 37.037 2.73 0.00 0.00 3.27
603 617 3.538591 CACCAGAGCTGCTTCATGAATA 58.461 45.455 8.96 0.47 0.00 1.75
613 627 2.866762 GCTTCATGAATACGTCCTCACC 59.133 50.000 8.96 0.00 0.00 4.02
626 640 3.768633 CTCACCGAATTGGAGGAGG 57.231 57.895 0.00 0.00 42.00 4.30
649 663 1.176527 CCGATGGACACATGGCTTTT 58.823 50.000 0.00 0.00 37.47 2.27
660 674 1.276989 CATGGCTTTTTGCATGGGTCT 59.723 47.619 0.00 0.00 45.15 3.85
663 677 0.881118 GCTTTTTGCATGGGTCTCGA 59.119 50.000 0.00 0.00 42.31 4.04
679 693 4.634883 GGTCTCGACTGTCAGTCTTACATA 59.365 45.833 26.46 7.18 42.92 2.29
681 695 6.482641 GGTCTCGACTGTCAGTCTTACATATA 59.517 42.308 26.46 4.93 42.92 0.86
682 696 7.173562 GGTCTCGACTGTCAGTCTTACATATAT 59.826 40.741 26.46 0.00 42.92 0.86
683 697 8.561212 GTCTCGACTGTCAGTCTTACATATATT 58.439 37.037 26.46 0.00 42.92 1.28
710 724 1.273886 GTCCGGGCCTCTTCATATCTC 59.726 57.143 0.84 0.00 0.00 2.75
712 726 1.974236 CCGGGCCTCTTCATATCTCTT 59.026 52.381 0.84 0.00 0.00 2.85
713 727 2.370189 CCGGGCCTCTTCATATCTCTTT 59.630 50.000 0.84 0.00 0.00 2.52
717 731 5.002516 GGGCCTCTTCATATCTCTTTCATG 58.997 45.833 0.84 0.00 0.00 3.07
739 753 5.245531 TGTGTAGATTGGATTTGAGGTGTC 58.754 41.667 0.00 0.00 0.00 3.67
742 756 2.649312 AGATTGGATTTGAGGTGTCCCA 59.351 45.455 0.00 0.00 0.00 4.37
743 757 3.270433 AGATTGGATTTGAGGTGTCCCAT 59.730 43.478 0.00 0.00 0.00 4.00
775 814 1.902938 TGGATGGCAATTTCGTGACA 58.097 45.000 0.00 0.00 41.94 3.58
776 815 1.539388 TGGATGGCAATTTCGTGACAC 59.461 47.619 0.00 0.00 40.05 3.67
779 818 1.442017 GGCAATTTCGTGACACGGC 60.442 57.895 26.55 20.32 42.81 5.68
797 837 0.108615 GCCGCCGATGCATAGATAGT 60.109 55.000 8.55 0.00 37.32 2.12
798 838 1.673033 GCCGCCGATGCATAGATAGTT 60.673 52.381 8.55 0.00 37.32 2.24
817 857 5.473066 AGTTTTTGAGGGATCCAATTGTG 57.527 39.130 15.23 0.00 0.00 3.33
860 1113 4.946784 AGCATTTTCCTGATAACGACAC 57.053 40.909 0.00 0.00 0.00 3.67
904 1184 1.766059 TAGCCATCCGCCACTCCAT 60.766 57.895 0.00 0.00 38.78 3.41
906 1186 1.148273 GCCATCCGCCACTCCATAA 59.852 57.895 0.00 0.00 0.00 1.90
969 1256 2.580867 CGAGGCACGCACTAGAGC 60.581 66.667 1.54 1.54 34.51 4.09
987 1274 1.784525 GCCTACAGCATACATCGTCC 58.215 55.000 0.00 0.00 42.97 4.79
1122 1409 2.617276 CCTAGTCGGTGAGTGGTCAGTA 60.617 54.545 0.00 0.00 31.53 2.74
1138 1425 1.141234 GTACAGTACCAGGCTCCGC 59.859 63.158 0.00 0.00 0.00 5.54
1207 1504 2.754472 GCGCGCATATATATGGATGGA 58.246 47.619 29.10 0.00 34.32 3.41
1419 1716 1.658686 CTTCACCGTCTCCTCCCTCG 61.659 65.000 0.00 0.00 0.00 4.63
1466 1786 3.193263 CCGATTGATCTTCAGTCCAGTG 58.807 50.000 0.00 0.00 30.40 3.66
1470 1795 1.552337 TGATCTTCAGTCCAGTGGAGC 59.448 52.381 13.61 7.88 29.39 4.70
1478 1803 0.890683 GTCCAGTGGAGCCCAATTTG 59.109 55.000 13.61 0.00 34.18 2.32
1495 1820 5.217393 CAATTTGATCCGCAATCCAGTATG 58.783 41.667 0.00 0.00 36.15 2.39
1505 1830 4.168760 GCAATCCAGTATGTTTCACAAGC 58.831 43.478 0.00 0.00 0.00 4.01
1517 1842 0.817229 TCACAAGCCACAACGCATCA 60.817 50.000 0.00 0.00 0.00 3.07
1520 1845 1.336148 ACAAGCCACAACGCATCATTG 60.336 47.619 0.00 0.00 0.00 2.82
1522 1847 0.523072 AGCCACAACGCATCATTGAC 59.477 50.000 0.00 0.00 0.00 3.18
1527 1852 2.223845 CACAACGCATCATTGACACTGA 59.776 45.455 0.00 0.00 0.00 3.41
1565 1890 2.221169 TGGTTTCACTCACAGCACATC 58.779 47.619 0.00 0.00 0.00 3.06
1567 1892 2.225019 GGTTTCACTCACAGCACATCAG 59.775 50.000 0.00 0.00 0.00 2.90
1570 1895 3.582714 TCACTCACAGCACATCAGTAG 57.417 47.619 0.00 0.00 0.00 2.57
1580 1905 7.392393 TCACAGCACATCAGTAGTAGTAGTAAA 59.608 37.037 0.00 0.00 0.00 2.01
1581 1906 7.485277 CACAGCACATCAGTAGTAGTAGTAAAC 59.515 40.741 0.00 0.00 0.00 2.01
1582 1907 7.393796 ACAGCACATCAGTAGTAGTAGTAAACT 59.606 37.037 0.00 0.00 42.62 2.66
1583 1908 8.890718 CAGCACATCAGTAGTAGTAGTAAACTA 58.109 37.037 0.00 0.00 39.80 2.24
1584 1909 9.111613 AGCACATCAGTAGTAGTAGTAAACTAG 57.888 37.037 0.00 0.00 41.42 2.57
1585 1910 8.891720 GCACATCAGTAGTAGTAGTAAACTAGT 58.108 37.037 3.15 3.15 44.81 2.57
1654 1982 1.517276 CCAGAAATTACGACGCTAGCG 59.483 52.381 34.27 34.27 46.03 4.26
1671 1999 1.949631 CGGCGGCTATTCGAGAACC 60.950 63.158 7.61 0.00 0.00 3.62
1672 2000 1.143183 GGCGGCTATTCGAGAACCA 59.857 57.895 0.00 0.00 0.00 3.67
1688 2016 3.117888 AGAACCACACCATGTCTGAAACT 60.118 43.478 0.00 0.00 0.00 2.66
1689 2017 2.851195 ACCACACCATGTCTGAAACTC 58.149 47.619 0.00 0.00 0.00 3.01
1691 2019 1.195448 CACACCATGTCTGAAACTCGC 59.805 52.381 0.00 0.00 0.00 5.03
1701 2029 1.176619 TGAAACTCGCCGGAGAGACA 61.177 55.000 37.54 28.09 43.27 3.41
1703 2031 0.038159 AAACTCGCCGGAGAGACAAG 60.038 55.000 37.54 15.48 43.27 3.16
1712 2040 2.155279 CGGAGAGACAAGTCAGTCAGA 58.845 52.381 2.72 0.00 40.98 3.27
1713 2041 2.161410 CGGAGAGACAAGTCAGTCAGAG 59.839 54.545 2.72 0.00 40.98 3.35
1715 2043 1.892474 AGAGACAAGTCAGTCAGAGCC 59.108 52.381 2.72 0.00 40.98 4.70
1718 2046 0.827925 ACAAGTCAGTCAGAGCCCGA 60.828 55.000 0.00 0.00 0.00 5.14
1719 2047 0.389166 CAAGTCAGTCAGAGCCCGAC 60.389 60.000 0.00 0.00 0.00 4.79
1720 2048 1.867919 AAGTCAGTCAGAGCCCGACG 61.868 60.000 0.00 0.00 38.46 5.12
1721 2049 3.749064 TCAGTCAGAGCCCGACGC 61.749 66.667 0.00 0.00 38.46 5.19
1722 2050 4.803426 CAGTCAGAGCCCGACGCC 62.803 72.222 0.00 0.00 38.46 5.68
1766 2115 2.842394 ATCGTTGTCAGCTCAGGCCG 62.842 60.000 0.00 0.00 39.73 6.13
1806 2156 6.148150 GTGTTTTGTCATGACGGTTAGGATTA 59.852 38.462 20.54 0.00 0.00 1.75
1889 2250 4.464069 AGCTTAGTCCTACTCTGCTTTG 57.536 45.455 0.00 0.00 34.72 2.77
1890 2251 2.933260 GCTTAGTCCTACTCTGCTTTGC 59.067 50.000 0.00 0.00 0.00 3.68
1895 2256 2.739379 GTCCTACTCTGCTTTGCTTGTC 59.261 50.000 0.00 0.00 0.00 3.18
1970 2331 1.448893 GCCGATCGCTGTACCCAAA 60.449 57.895 10.32 0.00 0.00 3.28
1971 2332 1.429148 GCCGATCGCTGTACCCAAAG 61.429 60.000 10.32 0.00 0.00 2.77
1972 2333 1.429148 CCGATCGCTGTACCCAAAGC 61.429 60.000 10.32 0.00 36.03 3.51
1973 2334 0.739462 CGATCGCTGTACCCAAAGCA 60.739 55.000 0.26 0.00 39.47 3.91
1974 2335 1.668419 GATCGCTGTACCCAAAGCAT 58.332 50.000 4.08 0.00 39.47 3.79
2012 2373 0.703488 TCCATGCCAATCCAGAACCA 59.297 50.000 0.00 0.00 0.00 3.67
2020 2381 5.271598 TGCCAATCCAGAACCAAGATTTAT 58.728 37.500 0.00 0.00 0.00 1.40
2021 2382 6.430864 TGCCAATCCAGAACCAAGATTTATA 58.569 36.000 0.00 0.00 0.00 0.98
2022 2383 6.547141 TGCCAATCCAGAACCAAGATTTATAG 59.453 38.462 0.00 0.00 0.00 1.31
2023 2384 6.547510 GCCAATCCAGAACCAAGATTTATAGT 59.452 38.462 0.00 0.00 0.00 2.12
2025 2386 9.057089 CCAATCCAGAACCAAGATTTATAGTAC 57.943 37.037 0.00 0.00 0.00 2.73
2026 2387 8.765219 CAATCCAGAACCAAGATTTATAGTACG 58.235 37.037 0.00 0.00 0.00 3.67
2037 2398 6.053650 AGATTTATAGTACGGCTGGAAAACC 58.946 40.000 0.00 0.00 0.00 3.27
2069 2430 4.536364 GTCACCGTCCATGACAATAATG 57.464 45.455 0.00 0.00 44.87 1.90
2073 2434 4.574421 CACCGTCCATGACAATAATGCTAA 59.426 41.667 0.00 0.00 32.09 3.09
2080 2447 8.552034 GTCCATGACAATAATGCTAAGAACTAC 58.448 37.037 0.00 0.00 32.09 2.73
2081 2448 8.264347 TCCATGACAATAATGCTAAGAACTACA 58.736 33.333 0.00 0.00 0.00 2.74
2115 2482 5.926542 TGTCTTAGATTTTGAGACGGAACTG 59.073 40.000 0.00 0.00 42.02 3.16
2127 2494 6.124340 TGAGACGGAACTGGTAGTATTCATA 58.876 40.000 0.00 0.00 0.00 2.15
2128 2495 6.262496 TGAGACGGAACTGGTAGTATTCATAG 59.738 42.308 0.00 0.00 0.00 2.23
2129 2496 6.127793 AGACGGAACTGGTAGTATTCATAGT 58.872 40.000 0.00 0.00 0.00 2.12
2202 2569 7.201600 CGGTGAATTTTATTGGCTTAAAATGGG 60.202 37.037 14.93 4.89 39.61 4.00
2203 2570 7.415095 GGTGAATTTTATTGGCTTAAAATGGGC 60.415 37.037 14.93 10.43 39.61 5.36
2204 2571 7.120432 GTGAATTTTATTGGCTTAAAATGGGCA 59.880 33.333 14.93 11.99 39.61 5.36
2205 2572 7.833183 TGAATTTTATTGGCTTAAAATGGGCAT 59.167 29.630 14.93 4.43 39.61 4.40
2207 2574 9.692325 AATTTTATTGGCTTAAAATGGGCATTA 57.308 25.926 14.93 0.00 39.61 1.90
2209 2576 8.729805 TTTATTGGCTTAAAATGGGCATTAAG 57.270 30.769 0.00 0.00 40.46 1.85
2210 2577 6.558488 ATTGGCTTAAAATGGGCATTAAGA 57.442 33.333 8.92 0.00 40.10 2.10
2212 2579 6.365970 TGGCTTAAAATGGGCATTAAGAAA 57.634 33.333 8.92 0.00 40.10 2.52
2214 2581 6.013812 TGGCTTAAAATGGGCATTAAGAAAGT 60.014 34.615 8.92 0.00 40.10 2.66
2215 2582 6.535150 GGCTTAAAATGGGCATTAAGAAAGTC 59.465 38.462 8.92 0.00 40.10 3.01
2217 2584 7.765819 GCTTAAAATGGGCATTAAGAAAGTCAT 59.234 33.333 8.92 0.00 40.10 3.06
2238 2709 5.810587 TCATTAAGACCAAAGCTAAGCGTAG 59.189 40.000 1.88 1.88 0.00 3.51
2274 2745 3.238108 ACTCAAAGCGATCAGATTCGT 57.762 42.857 0.00 0.00 41.16 3.85
2284 2755 3.302935 CGATCAGATTCGTGATTGGCAAG 60.303 47.826 5.96 0.00 37.29 4.01
2291 2762 2.710377 TCGTGATTGGCAAGCTACAAT 58.290 42.857 17.21 10.02 39.81 2.71
2296 2767 5.284079 GTGATTGGCAAGCTACAATAATGG 58.716 41.667 17.21 0.00 37.43 3.16
2299 2770 2.310538 GGCAAGCTACAATAATGGCCT 58.689 47.619 3.32 0.00 37.22 5.19
2310 2781 5.305585 ACAATAATGGCCTTATCCGTACAG 58.694 41.667 3.32 0.00 0.00 2.74
2321 2792 5.710567 CCTTATCCGTACAGACCATCTCATA 59.289 44.000 0.00 0.00 0.00 2.15
2326 2797 4.360563 CGTACAGACCATCTCATAACACC 58.639 47.826 0.00 0.00 0.00 4.16
2330 2801 4.041567 ACAGACCATCTCATAACACCACAA 59.958 41.667 0.00 0.00 0.00 3.33
2331 2802 5.003160 CAGACCATCTCATAACACCACAAA 58.997 41.667 0.00 0.00 0.00 2.83
2336 2807 3.064207 TCTCATAACACCACAAAGACGC 58.936 45.455 0.00 0.00 0.00 5.19
2380 2851 1.965414 TCAGGATCTAGCCACCCAAA 58.035 50.000 0.00 0.00 0.00 3.28
2382 2853 1.561542 CAGGATCTAGCCACCCAAAGT 59.438 52.381 0.00 0.00 0.00 2.66
2402 2873 9.981114 CCAAAGTCAAAATATAAGTTTTCACCT 57.019 29.630 0.00 0.00 0.00 4.00
2416 2887 4.503714 TTTCACCTTGAAGAACCAGTCT 57.496 40.909 0.00 0.00 37.70 3.24
2419 2890 3.648067 TCACCTTGAAGAACCAGTCTGAT 59.352 43.478 0.00 0.00 36.40 2.90
2426 2897 7.418827 CCTTGAAGAACCAGTCTGATCATATCT 60.419 40.741 0.00 0.00 36.40 1.98
2466 2937 5.626258 AGGTAACGACGTAAAAATATCGC 57.374 39.130 0.00 0.00 46.39 4.58
2478 2949 2.071778 AATATCGCCATTGCCAGGTT 57.928 45.000 0.00 0.00 0.00 3.50
2489 2960 2.738587 TGCCAGGTTTAACCAACTCA 57.261 45.000 17.10 5.70 41.95 3.41
2492 2963 2.751816 GCCAGGTTTAACCAACTCAGGT 60.752 50.000 17.10 0.00 45.91 4.00
2502 2973 9.092270 GTTTAACCAACTCAGGTCAGACCTAGA 62.092 44.444 22.52 18.81 42.25 2.43
2513 2984 4.794334 GTCAGACCTAGACCTTCATCCTA 58.206 47.826 0.00 0.00 0.00 2.94
2528 2999 1.146485 CCTAGAGCTCGAGACCGGA 59.854 63.158 23.77 0.00 36.24 5.14
2530 3001 1.002201 CCTAGAGCTCGAGACCGGATA 59.998 57.143 23.77 0.00 36.24 2.59
2554 3025 0.736325 AGTTGCACCACTATCGACGC 60.736 55.000 0.00 0.00 0.00 5.19
2586 3057 2.828877 TGTCACCACCACTTTTCTACG 58.171 47.619 0.00 0.00 0.00 3.51
2604 3075 0.105593 CGATCCCAGCAGCTACATGT 59.894 55.000 2.69 2.69 0.00 3.21
2615 3086 0.732880 GCTACATGTGACGTGCGACT 60.733 55.000 9.11 0.00 0.00 4.18
2618 3089 1.215014 ACATGTGACGTGCGACTGTG 61.215 55.000 4.41 0.00 0.00 3.66
2622 3093 1.942223 TGACGTGCGACTGTGAACG 60.942 57.895 0.00 8.55 41.64 3.95
2623 3094 1.656263 GACGTGCGACTGTGAACGA 60.656 57.895 14.70 0.00 39.27 3.85
2632 3103 1.597195 GACTGTGAACGATGCACAACA 59.403 47.619 10.00 0.00 44.75 3.33
2637 3108 2.226437 GTGAACGATGCACAACAATCCT 59.774 45.455 0.00 0.00 36.31 3.24
2639 3110 3.058293 TGAACGATGCACAACAATCCTTC 60.058 43.478 0.00 0.00 0.00 3.46
2641 3112 3.937814 ACGATGCACAACAATCCTTCTA 58.062 40.909 0.00 0.00 0.00 2.10
2642 3113 3.684788 ACGATGCACAACAATCCTTCTAC 59.315 43.478 0.00 0.00 0.00 2.59
2643 3114 3.684305 CGATGCACAACAATCCTTCTACA 59.316 43.478 0.00 0.00 0.00 2.74
2644 3115 4.436050 CGATGCACAACAATCCTTCTACAC 60.436 45.833 0.00 0.00 0.00 2.90
2648 3119 4.037446 GCACAACAATCCTTCTACACCAAA 59.963 41.667 0.00 0.00 0.00 3.28
2660 3131 0.680618 ACACCAAACCGTCGTCCATA 59.319 50.000 0.00 0.00 0.00 2.74
2869 4172 8.823220 ATATAATTACACTCAGCCAAAAACCT 57.177 30.769 0.00 0.00 0.00 3.50
3632 6194 1.600413 GGCGCAACCAAGACAAAGAAG 60.600 52.381 10.83 0.00 38.86 2.85
3665 6228 6.084326 ACCGATTTGACTAAGCAAAACAAT 57.916 33.333 0.00 0.00 40.72 2.71
3739 6302 2.084610 TGAAACCAGCACAGATCTCG 57.915 50.000 0.00 0.00 0.00 4.04
3740 6303 1.344438 TGAAACCAGCACAGATCTCGT 59.656 47.619 0.00 0.00 0.00 4.18
3768 6331 5.757886 TGATCCAACGAACAGAAAATTGAC 58.242 37.500 0.00 0.00 0.00 3.18
3881 6518 9.486497 AAAAACAAGCAAAATTTCACCATTTTT 57.514 22.222 0.00 0.00 34.70 1.94
3941 6582 7.226523 TGGTTAGTAAATGTCGGATGATTCATG 59.773 37.037 3.32 0.00 0.00 3.07
4124 6765 4.111016 ATCTCGACGTTCGGCGCA 62.111 61.111 15.74 5.05 46.11 6.09
4625 7296 3.166434 CTGGTTACCCTGGTGCCA 58.834 61.111 12.02 12.02 34.86 4.92
5281 7958 2.824041 GGTGGCCATGCGGTACAG 60.824 66.667 9.72 0.00 33.28 2.74
5329 8021 1.447838 GCGCAATGGAGACCGAGAA 60.448 57.895 0.30 0.00 0.00 2.87
5409 8101 3.376234 CACAACAAGGGACAGAGCATATG 59.624 47.826 0.00 0.00 0.00 1.78
5537 8230 7.865706 GTTGAATCAACCAGGTGTATAGATT 57.134 36.000 14.78 0.00 38.30 2.40
5538 8231 7.920738 GTTGAATCAACCAGGTGTATAGATTC 58.079 38.462 14.78 17.07 38.30 2.52
5577 8270 0.104304 ACTTGGCTAACCTATCGGCG 59.896 55.000 0.00 0.00 36.63 6.46
5582 8275 1.724929 CTAACCTATCGGCGTCGCG 60.725 63.158 11.75 0.00 36.13 5.87
5762 9912 3.282885 GCTATAGCCTCCAAAGTTGCTT 58.717 45.455 14.13 0.00 35.34 3.91
5986 10144 4.271291 GGTAACATCTCAAGCTCGGAAATC 59.729 45.833 0.00 0.00 0.00 2.17
6012 10170 1.768275 TGTGATGAACTGGTGAGTGGT 59.232 47.619 0.00 0.00 30.61 4.16
6014 10172 2.037772 GTGATGAACTGGTGAGTGGTCT 59.962 50.000 0.00 0.00 30.61 3.85
6039 10197 6.197168 AGGGGCTTTGAAAGATTTCATCATA 58.803 36.000 9.48 0.00 45.65 2.15
6061 10219 3.483869 GCCTTCCTCCTCGCCCAT 61.484 66.667 0.00 0.00 0.00 4.00
6096 10254 0.953960 GTCACTGCCAACCGGGTAAG 60.954 60.000 6.32 0.00 39.65 2.34
6097 10255 1.072505 CACTGCCAACCGGGTAAGT 59.927 57.895 6.32 0.22 39.65 2.24
6129 10287 6.562693 CGATACCGAGTCCAACATGGAGAG 62.563 54.167 0.00 0.00 42.46 3.20
6161 10319 1.647084 GCGTTCGGCTCAGTTGTTT 59.353 52.632 0.00 0.00 39.11 2.83
6171 10329 5.105513 TCGGCTCAGTTGTTTCACATAGATA 60.106 40.000 0.00 0.00 0.00 1.98
6195 10353 0.967380 GCCAGTTCCCCATTGACCAG 60.967 60.000 0.00 0.00 0.00 4.00
6196 10354 0.698238 CCAGTTCCCCATTGACCAGA 59.302 55.000 0.00 0.00 0.00 3.86
6197 10355 1.285962 CCAGTTCCCCATTGACCAGAT 59.714 52.381 0.00 0.00 0.00 2.90
6198 10356 2.372264 CAGTTCCCCATTGACCAGATG 58.628 52.381 0.00 0.00 0.00 2.90
6199 10357 1.995542 AGTTCCCCATTGACCAGATGT 59.004 47.619 0.00 0.00 0.00 3.06
6200 10358 2.379907 AGTTCCCCATTGACCAGATGTT 59.620 45.455 0.00 0.00 0.00 2.71
6201 10359 2.493278 GTTCCCCATTGACCAGATGTTG 59.507 50.000 0.00 0.00 0.00 3.33
6202 10360 1.991813 TCCCCATTGACCAGATGTTGA 59.008 47.619 0.00 0.00 0.00 3.18
6203 10361 2.025981 TCCCCATTGACCAGATGTTGAG 60.026 50.000 0.00 0.00 0.00 3.02
6204 10362 2.291153 CCCCATTGACCAGATGTTGAGT 60.291 50.000 0.00 0.00 0.00 3.41
6205 10363 3.054434 CCCCATTGACCAGATGTTGAGTA 60.054 47.826 0.00 0.00 0.00 2.59
6206 10364 4.567537 CCCCATTGACCAGATGTTGAGTAA 60.568 45.833 0.00 0.00 0.00 2.24
6207 10365 5.009631 CCCATTGACCAGATGTTGAGTAAA 58.990 41.667 0.00 0.00 0.00 2.01
6208 10366 5.653769 CCCATTGACCAGATGTTGAGTAAAT 59.346 40.000 0.00 0.00 0.00 1.40
6209 10367 6.828273 CCCATTGACCAGATGTTGAGTAAATA 59.172 38.462 0.00 0.00 0.00 1.40
6210 10368 7.012704 CCCATTGACCAGATGTTGAGTAAATAG 59.987 40.741 0.00 0.00 0.00 1.73
6211 10369 7.012704 CCATTGACCAGATGTTGAGTAAATAGG 59.987 40.741 0.00 0.00 0.00 2.57
6212 10370 5.428253 TGACCAGATGTTGAGTAAATAGGC 58.572 41.667 0.00 0.00 0.00 3.93
6213 10371 5.045942 TGACCAGATGTTGAGTAAATAGGCA 60.046 40.000 0.00 0.00 0.00 4.75
6214 10372 5.815581 ACCAGATGTTGAGTAAATAGGCAA 58.184 37.500 0.00 0.00 0.00 4.52
6215 10373 6.426587 ACCAGATGTTGAGTAAATAGGCAAT 58.573 36.000 0.00 0.00 0.00 3.56
6216 10374 6.891908 ACCAGATGTTGAGTAAATAGGCAATT 59.108 34.615 0.00 0.00 0.00 2.32
6217 10375 7.397192 ACCAGATGTTGAGTAAATAGGCAATTT 59.603 33.333 2.34 2.34 40.87 1.82
6218 10376 7.917505 CCAGATGTTGAGTAAATAGGCAATTTC 59.082 37.037 0.00 0.00 38.71 2.17
6219 10377 8.680903 CAGATGTTGAGTAAATAGGCAATTTCT 58.319 33.333 0.00 0.00 38.71 2.52
6220 10378 8.897752 AGATGTTGAGTAAATAGGCAATTTCTC 58.102 33.333 0.00 7.49 38.71 2.87
6221 10379 7.072177 TGTTGAGTAAATAGGCAATTTCTCG 57.928 36.000 0.00 0.00 38.71 4.04
6222 10380 6.876789 TGTTGAGTAAATAGGCAATTTCTCGA 59.123 34.615 0.00 5.03 38.71 4.04
6223 10381 7.552687 TGTTGAGTAAATAGGCAATTTCTCGAT 59.447 33.333 0.00 0.00 38.71 3.59
6224 10382 8.398665 GTTGAGTAAATAGGCAATTTCTCGATT 58.601 33.333 0.00 0.00 38.71 3.34
6225 10383 9.607988 TTGAGTAAATAGGCAATTTCTCGATTA 57.392 29.630 0.00 0.00 38.71 1.75
6226 10384 9.607988 TGAGTAAATAGGCAATTTCTCGATTAA 57.392 29.630 0.00 0.00 38.71 1.40
6235 10393 8.912988 AGGCAATTTCTCGATTAAATTAATCCA 58.087 29.630 17.23 6.53 41.10 3.41
6236 10394 8.968242 GGCAATTTCTCGATTAAATTAATCCAC 58.032 33.333 17.23 0.00 41.10 4.02
6237 10395 9.515020 GCAATTTCTCGATTAAATTAATCCACA 57.485 29.630 17.23 4.10 41.10 4.17
6256 10414 7.038154 TCCACAAATAAATTACTAGCATGGC 57.962 36.000 0.00 0.00 0.00 4.40
6257 10415 6.605194 TCCACAAATAAATTACTAGCATGGCA 59.395 34.615 0.00 0.00 0.00 4.92
6258 10416 7.287466 TCCACAAATAAATTACTAGCATGGCAT 59.713 33.333 0.00 0.00 0.00 4.40
6259 10417 7.927629 CCACAAATAAATTACTAGCATGGCATT 59.072 33.333 0.00 0.00 0.00 3.56
6260 10418 8.757789 CACAAATAAATTACTAGCATGGCATTG 58.242 33.333 0.00 0.00 0.00 2.82
6261 10419 8.694540 ACAAATAAATTACTAGCATGGCATTGA 58.305 29.630 0.00 0.00 0.00 2.57
6262 10420 8.971321 CAAATAAATTACTAGCATGGCATTGAC 58.029 33.333 0.00 0.00 0.00 3.18
6263 10421 7.822161 ATAAATTACTAGCATGGCATTGACA 57.178 32.000 0.00 0.00 0.00 3.58
6264 10422 6.720112 AAATTACTAGCATGGCATTGACAT 57.280 33.333 0.00 0.00 0.00 3.06
6265 10423 7.822161 AAATTACTAGCATGGCATTGACATA 57.178 32.000 4.27 0.00 25.85 2.29
6266 10424 7.822161 AATTACTAGCATGGCATTGACATAA 57.178 32.000 4.27 0.00 25.85 1.90
6267 10425 7.822161 ATTACTAGCATGGCATTGACATAAA 57.178 32.000 4.27 0.00 25.85 1.40
6268 10426 7.822161 TTACTAGCATGGCATTGACATAAAT 57.178 32.000 4.27 0.00 25.85 1.40
6269 10427 8.916628 TTACTAGCATGGCATTGACATAAATA 57.083 30.769 4.27 0.00 25.85 1.40
6270 10428 7.822161 ACTAGCATGGCATTGACATAAATAA 57.178 32.000 4.27 0.00 25.85 1.40
6271 10429 8.236585 ACTAGCATGGCATTGACATAAATAAA 57.763 30.769 4.27 0.00 25.85 1.40
6272 10430 8.137437 ACTAGCATGGCATTGACATAAATAAAC 58.863 33.333 4.27 0.00 25.85 2.01
6273 10431 5.978919 AGCATGGCATTGACATAAATAAACG 59.021 36.000 4.27 0.00 25.85 3.60
6274 10432 5.332506 GCATGGCATTGACATAAATAAACGC 60.333 40.000 4.27 0.00 25.85 4.84
6275 10433 5.316327 TGGCATTGACATAAATAAACGCA 57.684 34.783 0.00 0.00 0.00 5.24
6276 10434 5.900425 TGGCATTGACATAAATAAACGCAT 58.100 33.333 0.00 0.00 0.00 4.73
6277 10435 7.032377 TGGCATTGACATAAATAAACGCATA 57.968 32.000 0.00 0.00 0.00 3.14
6278 10436 6.915300 TGGCATTGACATAAATAAACGCATAC 59.085 34.615 0.00 0.00 0.00 2.39
6279 10437 7.138736 GGCATTGACATAAATAAACGCATACT 58.861 34.615 0.00 0.00 0.00 2.12
6280 10438 7.113404 GGCATTGACATAAATAAACGCATACTG 59.887 37.037 0.00 0.00 0.00 2.74
6281 10439 7.855409 GCATTGACATAAATAAACGCATACTGA 59.145 33.333 0.00 0.00 0.00 3.41
6282 10440 9.882996 CATTGACATAAATAAACGCATACTGAT 57.117 29.630 0.00 0.00 0.00 2.90
6288 10446 9.689075 CATAAATAAACGCATACTGATATTCGG 57.311 33.333 0.00 0.00 32.48 4.30
6289 10447 7.724305 AAATAAACGCATACTGATATTCGGT 57.276 32.000 0.00 0.00 39.68 4.69
6290 10448 6.946229 ATAAACGCATACTGATATTCGGTC 57.054 37.500 0.00 0.00 37.20 4.79
6291 10449 4.316205 AACGCATACTGATATTCGGTCA 57.684 40.909 0.00 0.00 37.20 4.02
6292 10450 4.316205 ACGCATACTGATATTCGGTCAA 57.684 40.909 0.00 0.00 37.20 3.18
6293 10451 4.299155 ACGCATACTGATATTCGGTCAAG 58.701 43.478 0.00 0.00 37.20 3.02
6294 10452 3.121944 CGCATACTGATATTCGGTCAAGC 59.878 47.826 0.00 0.00 37.20 4.01
6295 10453 4.310769 GCATACTGATATTCGGTCAAGCT 58.689 43.478 0.00 0.00 37.20 3.74
6296 10454 5.470368 GCATACTGATATTCGGTCAAGCTA 58.530 41.667 0.00 0.00 37.20 3.32
6297 10455 5.574830 GCATACTGATATTCGGTCAAGCTAG 59.425 44.000 0.00 0.00 37.20 3.42
6298 10456 3.983741 ACTGATATTCGGTCAAGCTAGC 58.016 45.455 6.62 6.62 27.61 3.42
6299 10457 3.384789 ACTGATATTCGGTCAAGCTAGCA 59.615 43.478 18.83 0.00 27.61 3.49
6300 10458 3.717707 TGATATTCGGTCAAGCTAGCAC 58.282 45.455 18.83 6.29 0.00 4.40
6301 10459 3.132111 TGATATTCGGTCAAGCTAGCACA 59.868 43.478 18.83 0.00 0.00 4.57
6302 10460 2.698855 ATTCGGTCAAGCTAGCACAT 57.301 45.000 18.83 0.00 0.00 3.21
6303 10461 3.819564 ATTCGGTCAAGCTAGCACATA 57.180 42.857 18.83 0.00 0.00 2.29
6304 10462 2.579207 TCGGTCAAGCTAGCACATAC 57.421 50.000 18.83 9.07 0.00 2.39
6305 10463 2.100197 TCGGTCAAGCTAGCACATACT 58.900 47.619 18.83 0.00 0.00 2.12
6306 10464 3.284617 TCGGTCAAGCTAGCACATACTA 58.715 45.455 18.83 0.00 0.00 1.82
6307 10465 3.066342 TCGGTCAAGCTAGCACATACTAC 59.934 47.826 18.83 4.80 0.00 2.73
6308 10466 3.372954 GGTCAAGCTAGCACATACTACG 58.627 50.000 18.83 0.00 0.00 3.51
6309 10467 2.789893 GTCAAGCTAGCACATACTACGC 59.210 50.000 18.83 0.00 0.00 4.42
6310 10468 2.688446 TCAAGCTAGCACATACTACGCT 59.312 45.455 18.83 0.00 39.80 5.07
6311 10469 3.881089 TCAAGCTAGCACATACTACGCTA 59.119 43.478 18.83 0.00 37.20 4.26
6312 10470 4.337274 TCAAGCTAGCACATACTACGCTAA 59.663 41.667 18.83 0.00 37.77 3.09
6313 10471 5.009710 TCAAGCTAGCACATACTACGCTAAT 59.990 40.000 18.83 0.00 37.77 1.73
6314 10472 5.455056 AGCTAGCACATACTACGCTAATT 57.545 39.130 18.83 0.00 37.77 1.40
6315 10473 5.223382 AGCTAGCACATACTACGCTAATTG 58.777 41.667 18.83 0.00 37.77 2.32
6316 10474 4.143305 GCTAGCACATACTACGCTAATTGC 60.143 45.833 10.63 0.00 37.77 3.56
6317 10475 3.792401 AGCACATACTACGCTAATTGCA 58.208 40.909 0.00 0.00 43.06 4.08
6318 10476 3.804325 AGCACATACTACGCTAATTGCAG 59.196 43.478 0.00 0.00 43.06 4.41
6319 10477 3.802139 GCACATACTACGCTAATTGCAGA 59.198 43.478 0.00 0.00 43.06 4.26
6320 10478 4.270084 GCACATACTACGCTAATTGCAGAA 59.730 41.667 0.00 0.00 43.06 3.02
6321 10479 5.220586 GCACATACTACGCTAATTGCAGAAA 60.221 40.000 0.00 0.00 43.06 2.52
6322 10480 6.414079 CACATACTACGCTAATTGCAGAAAG 58.586 40.000 0.00 0.00 43.06 2.62
6323 10481 6.255670 CACATACTACGCTAATTGCAGAAAGA 59.744 38.462 0.00 0.00 43.06 2.52
6324 10482 6.986817 ACATACTACGCTAATTGCAGAAAGAT 59.013 34.615 0.00 0.00 43.06 2.40
6325 10483 5.975410 ACTACGCTAATTGCAGAAAGATC 57.025 39.130 0.00 0.00 43.06 2.75
6326 10484 5.665459 ACTACGCTAATTGCAGAAAGATCT 58.335 37.500 0.00 0.00 43.06 2.75
6327 10485 6.806751 ACTACGCTAATTGCAGAAAGATCTA 58.193 36.000 0.00 0.00 43.06 1.98
6328 10486 5.975410 ACGCTAATTGCAGAAAGATCTAC 57.025 39.130 0.00 0.00 43.06 2.59
6329 10487 4.504461 ACGCTAATTGCAGAAAGATCTACG 59.496 41.667 0.00 0.00 43.06 3.51
6330 10488 4.504461 CGCTAATTGCAGAAAGATCTACGT 59.496 41.667 0.00 0.00 43.06 3.57
6331 10489 5.685954 CGCTAATTGCAGAAAGATCTACGTA 59.314 40.000 0.00 0.00 43.06 3.57
6332 10490 6.363626 CGCTAATTGCAGAAAGATCTACGTAT 59.636 38.462 0.00 0.00 43.06 3.06
6333 10491 7.537649 CGCTAATTGCAGAAAGATCTACGTATA 59.462 37.037 0.00 0.00 43.06 1.47
6334 10492 9.193133 GCTAATTGCAGAAAGATCTACGTATAA 57.807 33.333 0.00 0.00 42.31 0.98
6336 10494 8.942338 AATTGCAGAAAGATCTACGTATAACA 57.058 30.769 0.00 0.00 33.50 2.41
6337 10495 8.942338 ATTGCAGAAAGATCTACGTATAACAA 57.058 30.769 0.00 0.00 33.50 2.83
6338 10496 8.942338 TTGCAGAAAGATCTACGTATAACAAT 57.058 30.769 0.00 0.00 33.50 2.71
6346 10504 8.758633 AGATCTACGTATAACAATAACATGGC 57.241 34.615 0.00 0.00 0.00 4.40
6347 10505 8.585881 AGATCTACGTATAACAATAACATGGCT 58.414 33.333 0.00 0.00 0.00 4.75
6348 10506 9.850628 GATCTACGTATAACAATAACATGGCTA 57.149 33.333 0.00 0.00 0.00 3.93
6353 10511 8.948145 ACGTATAACAATAACATGGCTAAAACA 58.052 29.630 0.00 0.00 0.00 2.83
6354 10512 9.433317 CGTATAACAATAACATGGCTAAAACAG 57.567 33.333 0.00 0.00 0.00 3.16
6359 10517 8.587952 ACAATAACATGGCTAAAACAGAAAAC 57.412 30.769 0.00 0.00 0.00 2.43
6360 10518 8.200792 ACAATAACATGGCTAAAACAGAAAACA 58.799 29.630 0.00 0.00 0.00 2.83
6361 10519 8.702438 CAATAACATGGCTAAAACAGAAAACAG 58.298 33.333 0.00 0.00 0.00 3.16
6362 10520 5.852282 ACATGGCTAAAACAGAAAACAGT 57.148 34.783 0.00 0.00 0.00 3.55
6363 10521 6.952773 ACATGGCTAAAACAGAAAACAGTA 57.047 33.333 0.00 0.00 0.00 2.74
6364 10522 6.970484 ACATGGCTAAAACAGAAAACAGTAG 58.030 36.000 0.00 0.00 0.00 2.57
6365 10523 6.016276 ACATGGCTAAAACAGAAAACAGTAGG 60.016 38.462 0.00 0.00 0.00 3.18
6366 10524 5.686753 TGGCTAAAACAGAAAACAGTAGGA 58.313 37.500 0.00 0.00 0.00 2.94
6367 10525 5.763204 TGGCTAAAACAGAAAACAGTAGGAG 59.237 40.000 0.00 0.00 0.00 3.69
6368 10526 5.334957 GGCTAAAACAGAAAACAGTAGGAGC 60.335 44.000 0.00 0.00 0.00 4.70
6369 10527 4.813296 AAAACAGAAAACAGTAGGAGCG 57.187 40.909 0.00 0.00 0.00 5.03
6370 10528 2.457366 ACAGAAAACAGTAGGAGCGG 57.543 50.000 0.00 0.00 0.00 5.52
6371 10529 1.002087 ACAGAAAACAGTAGGAGCGGG 59.998 52.381 0.00 0.00 0.00 6.13
6372 10530 1.275291 CAGAAAACAGTAGGAGCGGGA 59.725 52.381 0.00 0.00 0.00 5.14
6373 10531 2.093447 CAGAAAACAGTAGGAGCGGGAT 60.093 50.000 0.00 0.00 0.00 3.85
6374 10532 3.132289 CAGAAAACAGTAGGAGCGGGATA 59.868 47.826 0.00 0.00 0.00 2.59
6375 10533 3.773119 AGAAAACAGTAGGAGCGGGATAA 59.227 43.478 0.00 0.00 0.00 1.75
6376 10534 4.224370 AGAAAACAGTAGGAGCGGGATAAA 59.776 41.667 0.00 0.00 0.00 1.40
6377 10535 3.538634 AACAGTAGGAGCGGGATAAAC 57.461 47.619 0.00 0.00 0.00 2.01
6378 10536 1.407979 ACAGTAGGAGCGGGATAAACG 59.592 52.381 0.00 0.00 0.00 3.60
6379 10537 1.679680 CAGTAGGAGCGGGATAAACGA 59.320 52.381 0.00 0.00 0.00 3.85
6380 10538 1.955080 AGTAGGAGCGGGATAAACGAG 59.045 52.381 0.00 0.00 0.00 4.18
6381 10539 1.680207 GTAGGAGCGGGATAAACGAGT 59.320 52.381 0.00 0.00 0.00 4.18
6382 10540 1.192428 AGGAGCGGGATAAACGAGTT 58.808 50.000 0.00 0.00 0.00 3.01
6383 10541 2.381911 AGGAGCGGGATAAACGAGTTA 58.618 47.619 0.00 0.00 0.00 2.24
6384 10542 2.963782 AGGAGCGGGATAAACGAGTTAT 59.036 45.455 0.00 0.00 34.97 1.89
6385 10543 4.147321 AGGAGCGGGATAAACGAGTTATA 58.853 43.478 0.00 0.00 32.26 0.98
6386 10544 4.022503 AGGAGCGGGATAAACGAGTTATAC 60.023 45.833 0.00 0.00 32.26 1.47
6387 10545 4.233005 GAGCGGGATAAACGAGTTATACC 58.767 47.826 12.34 12.34 46.48 2.73
6391 10549 5.144692 GGGATAAACGAGTTATACCCTCC 57.855 47.826 11.63 3.81 44.83 4.30
6392 10550 4.590222 GGGATAAACGAGTTATACCCTCCA 59.410 45.833 11.63 0.00 44.83 3.86
6393 10551 5.279356 GGGATAAACGAGTTATACCCTCCAG 60.279 48.000 11.63 0.00 44.83 3.86
6394 10552 5.303845 GGATAAACGAGTTATACCCTCCAGT 59.696 44.000 0.00 0.00 32.26 4.00
6395 10553 6.491403 GGATAAACGAGTTATACCCTCCAGTA 59.509 42.308 0.00 0.00 32.26 2.74
6396 10554 5.848833 AAACGAGTTATACCCTCCAGTAG 57.151 43.478 0.00 0.00 0.00 2.57
6397 10555 3.830121 ACGAGTTATACCCTCCAGTAGG 58.170 50.000 0.00 0.00 46.09 3.18
6398 10556 2.557490 CGAGTTATACCCTCCAGTAGGC 59.443 54.545 0.00 0.00 45.03 3.93
6399 10557 2.898612 GAGTTATACCCTCCAGTAGGCC 59.101 54.545 0.00 0.00 45.03 5.19
6400 10558 2.249214 AGTTATACCCTCCAGTAGGCCA 59.751 50.000 5.01 0.00 45.03 5.36
6401 10559 3.116317 AGTTATACCCTCCAGTAGGCCAT 60.116 47.826 5.01 0.00 45.03 4.40
6402 10560 1.734655 ATACCCTCCAGTAGGCCATG 58.265 55.000 5.01 0.00 45.03 3.66
6403 10561 0.399949 TACCCTCCAGTAGGCCATGG 60.400 60.000 7.63 7.63 45.03 3.66
6404 10562 1.384502 CCCTCCAGTAGGCCATGGA 60.385 63.158 18.40 19.76 45.03 3.41
6407 10565 3.230608 TCCAGTAGGCCATGGAGAG 57.769 57.895 18.40 0.00 40.70 3.20
6408 10566 0.399091 TCCAGTAGGCCATGGAGAGG 60.399 60.000 18.40 7.81 40.70 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.942410 TTTTGCGGACGAGAAGGACG 60.942 55.000 0.00 0.00 0.00 4.79
66 67 0.807667 CTTCATCCACGAGGCGAAGG 60.808 60.000 17.35 0.00 39.01 3.46
67 68 0.108615 ACTTCATCCACGAGGCGAAG 60.109 55.000 21.04 21.04 43.87 3.79
90 91 4.695231 CGACGGTGGCGACGAACT 62.695 66.667 0.00 0.00 34.93 3.01
104 105 0.465705 TCCATCCAATCTGAGGCGAC 59.534 55.000 0.00 0.00 0.00 5.19
115 116 1.123077 CCATCCTCGAGTCCATCCAA 58.877 55.000 12.31 0.00 0.00 3.53
122 123 2.107953 GCAGGCCATCCTCGAGTC 59.892 66.667 12.31 0.00 41.93 3.36
180 181 0.482446 AGCAATGGGGGAAGTGTTGA 59.518 50.000 0.00 0.00 0.00 3.18
185 186 2.460669 GAATTCAGCAATGGGGGAAGT 58.539 47.619 0.00 0.00 0.00 3.01
217 218 1.596934 GAGGAGGTGGCGTCAATGA 59.403 57.895 0.00 0.00 0.00 2.57
236 237 2.479750 GGAGGAGCCTACGTCGGAC 61.480 68.421 10.86 2.87 0.00 4.79
257 264 0.105194 TGGAAGAGGTGGAGGTGTCA 60.105 55.000 0.00 0.00 0.00 3.58
258 265 1.208293 GATGGAAGAGGTGGAGGTGTC 59.792 57.143 0.00 0.00 0.00 3.67
267 274 2.836981 CAGACAAGGAGATGGAAGAGGT 59.163 50.000 0.00 0.00 0.00 3.85
283 290 4.704103 AGGAGGAGGCGCCAGACA 62.704 66.667 31.54 0.00 40.02 3.41
325 335 3.985877 GCACACTGCACCATGCTA 58.014 55.556 2.02 0.00 45.31 3.49
336 350 1.635663 GCGCGTTATTGAGGCACACT 61.636 55.000 8.43 0.00 39.06 3.55
364 378 3.606662 CGTCGGGCGGAGATCCAT 61.607 66.667 0.00 0.00 36.85 3.41
374 388 4.500116 GACTCTGGAGCGTCGGGC 62.500 72.222 0.00 0.00 44.05 6.13
386 400 2.162608 CGTACTACAAGCTGCTGACTCT 59.837 50.000 1.35 0.00 0.00 3.24
440 454 3.070018 CACTTCCAATTTGAGCTCGTCT 58.930 45.455 9.64 0.00 0.00 4.18
442 456 2.154462 CCACTTCCAATTTGAGCTCGT 58.846 47.619 9.64 0.00 0.00 4.18
463 477 0.032615 TGCTCCCTCCTCTTCCTCTC 60.033 60.000 0.00 0.00 0.00 3.20
518 532 2.202756 CAACCCTAGCCTCGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
540 554 4.000988 CACAGTTATTTAAGCCGGACAGT 58.999 43.478 5.05 0.00 0.00 3.55
542 556 4.010667 ACACAGTTATTTAAGCCGGACA 57.989 40.909 5.05 0.00 0.00 4.02
557 571 1.202698 GCCTGAGAGGTCAAACACAGT 60.203 52.381 0.00 0.00 37.80 3.55
559 573 0.249868 CGCCTGAGAGGTCAAACACA 60.250 55.000 0.00 0.00 37.80 3.72
561 575 1.371183 CCGCCTGAGAGGTCAAACA 59.629 57.895 0.00 0.00 37.80 2.83
603 617 0.246635 CTCCAATTCGGTGAGGACGT 59.753 55.000 0.00 0.00 35.57 4.34
613 627 2.897350 GGCGCCTCCTCCAATTCG 60.897 66.667 22.15 0.00 0.00 3.34
626 640 3.576356 CATGTGTCCATCGGGCGC 61.576 66.667 0.00 0.00 0.00 6.53
634 648 1.117994 TGCAAAAAGCCATGTGTCCA 58.882 45.000 0.00 0.00 44.83 4.02
635 649 2.070783 CATGCAAAAAGCCATGTGTCC 58.929 47.619 0.00 0.00 44.83 4.02
641 655 1.551883 GAGACCCATGCAAAAAGCCAT 59.448 47.619 0.00 0.00 44.83 4.40
649 663 0.037326 GACAGTCGAGACCCATGCAA 60.037 55.000 0.00 0.00 0.00 4.08
663 677 6.099701 TGCCCAATATATGTAAGACTGACAGT 59.900 38.462 8.12 8.12 0.00 3.55
679 693 2.508928 CCCGGACGTGCCCAATAT 59.491 61.111 0.73 0.00 0.00 1.28
710 724 7.121759 ACCTCAAATCCAATCTACACATGAAAG 59.878 37.037 0.00 0.00 0.00 2.62
712 726 6.375174 CACCTCAAATCCAATCTACACATGAA 59.625 38.462 0.00 0.00 0.00 2.57
713 727 5.882000 CACCTCAAATCCAATCTACACATGA 59.118 40.000 0.00 0.00 0.00 3.07
717 731 4.636206 GGACACCTCAAATCCAATCTACAC 59.364 45.833 0.00 0.00 32.35 2.90
742 756 2.158460 GCCATCCAACTAGCCCCTTTAT 60.158 50.000 0.00 0.00 0.00 1.40
743 757 1.214424 GCCATCCAACTAGCCCCTTTA 59.786 52.381 0.00 0.00 0.00 1.85
779 818 2.370281 AACTATCTATGCATCGGCGG 57.630 50.000 7.21 0.00 45.35 6.13
783 822 5.991606 TCCCTCAAAAACTATCTATGCATCG 59.008 40.000 0.19 0.00 0.00 3.84
788 828 8.930846 ATTGGATCCCTCAAAAACTATCTATG 57.069 34.615 9.90 0.00 0.00 2.23
831 1084 8.662141 TCGTTATCAGGAAAATGCTAAACTTAC 58.338 33.333 0.00 0.00 0.00 2.34
904 1184 8.028938 GCTGGAGCAAAATGATTAGAGTTTTTA 58.971 33.333 0.00 0.00 41.59 1.52
906 1186 6.393171 GCTGGAGCAAAATGATTAGAGTTTT 58.607 36.000 0.00 0.00 41.59 2.43
969 1256 1.607148 TCGGACGATGTATGCTGTAGG 59.393 52.381 0.00 0.00 0.00 3.18
1138 1425 0.174389 CTAGATCGATCCATGGCGGG 59.826 60.000 21.66 0.00 34.36 6.13
1197 1494 1.623811 GTACCCTGCGTCCATCCATAT 59.376 52.381 0.00 0.00 0.00 1.78
1198 1495 1.045407 GTACCCTGCGTCCATCCATA 58.955 55.000 0.00 0.00 0.00 2.74
1199 1496 1.830145 GTACCCTGCGTCCATCCAT 59.170 57.895 0.00 0.00 0.00 3.41
1200 1497 2.717044 CGTACCCTGCGTCCATCCA 61.717 63.158 0.00 0.00 0.00 3.41
1441 1738 2.695666 GGACTGAAGATCAATCGGGAGA 59.304 50.000 10.91 0.00 46.90 3.71
1442 1739 2.432146 TGGACTGAAGATCAATCGGGAG 59.568 50.000 10.91 0.00 0.00 4.30
1444 1741 2.169352 ACTGGACTGAAGATCAATCGGG 59.831 50.000 10.91 2.51 0.00 5.14
1445 1742 3.193263 CACTGGACTGAAGATCAATCGG 58.807 50.000 0.00 0.38 0.00 4.18
1466 1786 1.037030 TGCGGATCAAATTGGGCTCC 61.037 55.000 0.00 0.00 0.00 4.70
1470 1795 1.755959 TGGATTGCGGATCAAATTGGG 59.244 47.619 0.00 0.00 38.34 4.12
1478 1803 3.876914 TGAAACATACTGGATTGCGGATC 59.123 43.478 0.00 0.00 0.00 3.36
1495 1820 0.179150 TGCGTTGTGGCTTGTGAAAC 60.179 50.000 0.00 0.00 37.35 2.78
1505 1830 1.536766 AGTGTCAATGATGCGTTGTGG 59.463 47.619 0.00 0.00 32.76 4.17
1517 1842 3.106054 AGGATGAGCTCTCAGTGTCAAT 58.894 45.455 16.19 0.00 43.61 2.57
1520 1845 2.098614 TGAGGATGAGCTCTCAGTGTC 58.901 52.381 16.19 5.01 43.61 3.67
1527 1852 2.040939 CCATGTCTGAGGATGAGCTCT 58.959 52.381 16.19 0.00 0.00 4.09
1595 1920 1.996191 GCCTTGTTCGAGTCATCACTC 59.004 52.381 0.00 0.00 45.19 3.51
1596 1921 1.344438 TGCCTTGTTCGAGTCATCACT 59.656 47.619 0.00 0.00 34.57 3.41
1597 1922 1.461127 GTGCCTTGTTCGAGTCATCAC 59.539 52.381 0.00 0.00 0.00 3.06
1598 1923 1.344438 AGTGCCTTGTTCGAGTCATCA 59.656 47.619 0.00 0.00 0.00 3.07
1607 1932 2.169832 TCTACTGCAGTGCCTTGTTC 57.830 50.000 29.57 0.00 0.00 3.18
1613 1938 1.226746 ACGTTTTCTACTGCAGTGCC 58.773 50.000 29.57 9.04 0.00 5.01
1654 1982 1.143183 TGGTTCTCGAATAGCCGCC 59.857 57.895 0.00 0.00 0.00 6.13
1671 1999 1.195448 GCGAGTTTCAGACATGGTGTG 59.805 52.381 0.00 0.00 0.00 3.82
1672 2000 1.512926 GCGAGTTTCAGACATGGTGT 58.487 50.000 0.00 0.00 0.00 4.16
1688 2016 1.587043 CTGACTTGTCTCTCCGGCGA 61.587 60.000 9.30 0.00 0.00 5.54
1689 2017 1.153939 CTGACTTGTCTCTCCGGCG 60.154 63.158 0.00 0.00 0.00 6.46
1691 2019 1.201181 CTGACTGACTTGTCTCTCCGG 59.799 57.143 0.00 0.00 37.79 5.14
1701 2029 1.867919 CGTCGGGCTCTGACTGACTT 61.868 60.000 10.23 0.00 44.25 3.01
1703 2031 2.179517 CGTCGGGCTCTGACTGAC 59.820 66.667 11.02 2.45 43.08 3.51
1718 2046 0.179108 GAATCTTCTACTGCCGGCGT 60.179 55.000 23.90 23.67 0.00 5.68
1719 2047 0.103208 AGAATCTTCTACTGCCGGCG 59.897 55.000 23.90 18.98 35.34 6.46
1720 2048 2.317530 AAGAATCTTCTACTGCCGGC 57.682 50.000 22.73 22.73 36.28 6.13
1721 2049 3.372954 CGTAAGAATCTTCTACTGCCGG 58.627 50.000 0.00 0.00 36.28 6.13
1722 2050 3.066342 TCCGTAAGAATCTTCTACTGCCG 59.934 47.826 0.00 0.00 36.28 5.69
1724 2052 4.995124 TGTCCGTAAGAATCTTCTACTGC 58.005 43.478 0.00 0.00 36.28 4.40
1725 2053 6.415280 CGATTGTCCGTAAGAATCTTCTACTG 59.585 42.308 0.00 0.00 36.28 2.74
1761 2110 2.741878 TAGTCCTGGTTGGTCGGCCT 62.742 60.000 7.97 0.00 37.07 5.19
1766 2115 3.487120 AAACACTAGTCCTGGTTGGTC 57.513 47.619 0.00 0.00 37.07 4.02
1806 2156 1.494824 CGTTTTTCTTCTCCGGTCGT 58.505 50.000 0.00 0.00 0.00 4.34
1865 2226 4.729227 AGCAGAGTAGGACTAAGCTTTC 57.271 45.455 3.20 0.00 35.68 2.62
1871 2232 4.040461 ACAAGCAAAGCAGAGTAGGACTAA 59.960 41.667 0.00 0.00 0.00 2.24
1872 2233 3.578716 ACAAGCAAAGCAGAGTAGGACTA 59.421 43.478 0.00 0.00 0.00 2.59
1873 2234 2.370189 ACAAGCAAAGCAGAGTAGGACT 59.630 45.455 0.00 0.00 0.00 3.85
1874 2235 2.739379 GACAAGCAAAGCAGAGTAGGAC 59.261 50.000 0.00 0.00 0.00 3.85
1875 2236 2.289694 GGACAAGCAAAGCAGAGTAGGA 60.290 50.000 0.00 0.00 0.00 2.94
1876 2237 2.079925 GGACAAGCAAAGCAGAGTAGG 58.920 52.381 0.00 0.00 0.00 3.18
1889 2250 1.081840 GCGCAGAAACAGGACAAGC 60.082 57.895 0.30 0.00 0.00 4.01
1890 2251 1.461127 GTAGCGCAGAAACAGGACAAG 59.539 52.381 11.47 0.00 0.00 3.16
1895 2256 0.944311 ACGTGTAGCGCAGAAACAGG 60.944 55.000 11.47 15.53 46.11 4.00
1932 2293 1.665679 CATACGCCTTGTGTGATGGAC 59.334 52.381 0.00 0.00 41.84 4.02
1970 2331 2.459644 TGATAGCCTTTTTGCCATGCT 58.540 42.857 0.00 0.00 36.11 3.79
1971 2332 2.965572 TGATAGCCTTTTTGCCATGC 57.034 45.000 0.00 0.00 0.00 4.06
1972 2333 4.365723 GACATGATAGCCTTTTTGCCATG 58.634 43.478 0.00 0.00 35.71 3.66
1973 2334 3.385755 GGACATGATAGCCTTTTTGCCAT 59.614 43.478 0.00 0.00 0.00 4.40
1974 2335 2.760092 GGACATGATAGCCTTTTTGCCA 59.240 45.455 0.00 0.00 0.00 4.92
1976 2337 4.365723 CATGGACATGATAGCCTTTTTGC 58.634 43.478 6.44 0.00 41.20 3.68
1977 2338 4.365723 GCATGGACATGATAGCCTTTTTG 58.634 43.478 15.99 0.00 41.20 2.44
1978 2339 3.385755 GGCATGGACATGATAGCCTTTTT 59.614 43.478 15.99 0.00 41.20 1.94
2012 2373 6.541278 GGTTTTCCAGCCGTACTATAAATCTT 59.459 38.462 0.00 0.00 40.31 2.40
2026 2387 1.273327 CATGTGAAGGGTTTTCCAGCC 59.727 52.381 0.00 0.00 44.40 4.85
2037 2398 1.148310 GACGGTGACACATGTGAAGG 58.852 55.000 31.94 16.85 0.00 3.46
2069 2430 9.372369 AGACATTTTCATAGTGTAGTTCTTAGC 57.628 33.333 0.00 0.00 0.00 3.09
2085 2452 7.659799 TCCGTCTCAAAATCTAAGACATTTTCA 59.340 33.333 0.00 0.00 39.49 2.69
2086 2453 8.029642 TCCGTCTCAAAATCTAAGACATTTTC 57.970 34.615 0.00 0.00 39.49 2.29
2092 2459 5.348997 CCAGTTCCGTCTCAAAATCTAAGAC 59.651 44.000 0.00 0.00 36.82 3.01
2098 2465 4.566987 ACTACCAGTTCCGTCTCAAAATC 58.433 43.478 0.00 0.00 0.00 2.17
2165 2532 7.011482 CCAATAAAATTCACCGTTTTGTCCAAA 59.989 33.333 0.00 0.00 31.71 3.28
2166 2533 6.480320 CCAATAAAATTCACCGTTTTGTCCAA 59.520 34.615 0.00 0.00 31.71 3.53
2167 2534 5.986135 CCAATAAAATTCACCGTTTTGTCCA 59.014 36.000 0.00 0.00 31.71 4.02
2168 2535 5.107259 GCCAATAAAATTCACCGTTTTGTCC 60.107 40.000 0.00 0.00 31.71 4.02
2169 2536 5.694458 AGCCAATAAAATTCACCGTTTTGTC 59.306 36.000 0.00 0.00 31.71 3.18
2170 2537 5.606505 AGCCAATAAAATTCACCGTTTTGT 58.393 33.333 0.00 0.00 31.71 2.83
2171 2538 6.538189 AAGCCAATAAAATTCACCGTTTTG 57.462 33.333 0.00 0.00 31.71 2.44
2172 2539 8.664211 TTTAAGCCAATAAAATTCACCGTTTT 57.336 26.923 0.00 0.00 33.67 2.43
2175 2542 7.333174 CCATTTTAAGCCAATAAAATTCACCGT 59.667 33.333 8.82 0.00 41.30 4.83
2202 2569 9.346725 CTTTGGTCTTAATGACTTTCTTAATGC 57.653 33.333 0.00 0.00 44.74 3.56
2203 2570 9.346725 GCTTTGGTCTTAATGACTTTCTTAATG 57.653 33.333 0.00 0.00 44.74 1.90
2204 2571 9.301897 AGCTTTGGTCTTAATGACTTTCTTAAT 57.698 29.630 0.00 0.00 44.74 1.40
2205 2572 8.691661 AGCTTTGGTCTTAATGACTTTCTTAA 57.308 30.769 0.00 0.00 44.74 1.85
2207 2574 8.691661 TTAGCTTTGGTCTTAATGACTTTCTT 57.308 30.769 0.00 0.00 44.74 2.52
2209 2576 7.024171 GCTTAGCTTTGGTCTTAATGACTTTC 58.976 38.462 0.00 0.00 44.74 2.62
2210 2577 6.348540 CGCTTAGCTTTGGTCTTAATGACTTT 60.349 38.462 1.76 0.00 44.74 2.66
2212 2579 4.631813 CGCTTAGCTTTGGTCTTAATGACT 59.368 41.667 1.76 0.00 44.74 3.41
2214 2581 4.575885 ACGCTTAGCTTTGGTCTTAATGA 58.424 39.130 1.76 0.00 0.00 2.57
2215 2582 4.946784 ACGCTTAGCTTTGGTCTTAATG 57.053 40.909 1.76 0.00 0.00 1.90
2217 2584 5.395682 TCTACGCTTAGCTTTGGTCTTAA 57.604 39.130 1.76 0.00 0.00 1.85
2249 2720 6.313905 ACGAATCTGATCGCTTTGAGTTTTAT 59.686 34.615 0.00 0.00 46.51 1.40
2250 2721 5.637810 ACGAATCTGATCGCTTTGAGTTTTA 59.362 36.000 0.00 0.00 46.51 1.52
2274 2745 4.202141 GCCATTATTGTAGCTTGCCAATCA 60.202 41.667 8.65 1.11 33.54 2.57
2284 2755 4.324267 ACGGATAAGGCCATTATTGTAGC 58.676 43.478 5.01 0.00 34.10 3.58
2291 2762 3.322828 GGTCTGTACGGATAAGGCCATTA 59.677 47.826 7.85 0.79 35.68 1.90
2296 2767 2.628657 AGATGGTCTGTACGGATAAGGC 59.371 50.000 7.85 0.00 0.00 4.35
2299 2770 6.548251 TGTTATGAGATGGTCTGTACGGATAA 59.452 38.462 7.85 0.00 0.00 1.75
2310 2781 5.122396 GTCTTTGTGGTGTTATGAGATGGTC 59.878 44.000 0.00 0.00 0.00 4.02
2321 2792 1.153329 TCGGCGTCTTTGTGGTGTT 60.153 52.632 6.85 0.00 0.00 3.32
2326 2797 0.600255 AGAACCTCGGCGTCTTTGTG 60.600 55.000 6.85 0.00 0.00 3.33
2330 2801 0.391597 TTGAAGAACCTCGGCGTCTT 59.608 50.000 6.85 8.63 0.00 3.01
2331 2802 0.319641 GTTGAAGAACCTCGGCGTCT 60.320 55.000 6.85 0.00 0.00 4.18
2336 2807 2.286184 CGTTGTTGTTGAAGAACCTCGG 60.286 50.000 2.62 0.00 32.86 4.63
2402 2873 7.124750 TCAGATATGATCAGACTGGTTCTTCAA 59.875 37.037 19.26 3.18 28.96 2.69
2405 2876 6.462768 GCTCAGATATGATCAGACTGGTTCTT 60.463 42.308 19.26 1.99 28.96 2.52
2410 2881 4.868314 TGCTCAGATATGATCAGACTGG 57.132 45.455 19.26 13.74 0.00 4.00
2466 2937 2.632512 AGTTGGTTAAACCTGGCAATGG 59.367 45.455 0.00 0.00 39.58 3.16
2478 2949 3.764237 GGTCTGACCTGAGTTGGTTAA 57.236 47.619 19.53 0.00 41.00 2.01
2492 2963 4.727332 TCTAGGATGAAGGTCTAGGTCTGA 59.273 45.833 0.00 0.00 33.31 3.27
2502 2973 2.173782 TCTCGAGCTCTAGGATGAAGGT 59.826 50.000 14.74 0.00 0.00 3.50
2504 2975 2.552315 GGTCTCGAGCTCTAGGATGAAG 59.448 54.545 14.74 0.00 0.00 3.02
2509 2980 1.146485 CCGGTCTCGAGCTCTAGGA 59.854 63.158 14.74 5.83 39.00 2.94
2513 2984 0.470766 AGTATCCGGTCTCGAGCTCT 59.529 55.000 12.85 0.00 39.00 4.09
2528 2999 3.243101 CGATAGTGGTGCAACTCGAGTAT 60.243 47.826 20.39 4.83 36.74 2.12
2530 3001 1.135373 CGATAGTGGTGCAACTCGAGT 60.135 52.381 13.58 13.58 36.74 4.18
2538 3009 2.161078 TTGGCGTCGATAGTGGTGCA 62.161 55.000 0.00 0.00 37.40 4.57
2570 3041 2.027469 GGGATCGTAGAAAAGTGGTGGT 60.027 50.000 0.00 0.00 43.58 4.16
2586 3057 1.139654 TCACATGTAGCTGCTGGGATC 59.860 52.381 13.43 0.00 0.00 3.36
2604 3075 1.942223 CGTTCACAGTCGCACGTCA 60.942 57.895 0.00 0.00 0.00 4.35
2615 3086 2.031245 GGATTGTTGTGCATCGTTCACA 60.031 45.455 0.00 3.75 42.10 3.58
2618 3089 3.189287 AGAAGGATTGTTGTGCATCGTTC 59.811 43.478 9.17 9.17 37.86 3.95
2622 3093 4.142600 GGTGTAGAAGGATTGTTGTGCATC 60.143 45.833 0.00 0.00 0.00 3.91
2623 3094 3.758554 GGTGTAGAAGGATTGTTGTGCAT 59.241 43.478 0.00 0.00 0.00 3.96
2632 3103 3.671716 GACGGTTTGGTGTAGAAGGATT 58.328 45.455 0.00 0.00 0.00 3.01
2637 3108 1.269726 GGACGACGGTTTGGTGTAGAA 60.270 52.381 0.00 0.00 0.00 2.10
2639 3110 0.032403 TGGACGACGGTTTGGTGTAG 59.968 55.000 0.00 0.00 0.00 2.74
2641 3112 0.680618 TATGGACGACGGTTTGGTGT 59.319 50.000 0.00 0.00 0.00 4.16
2642 3113 1.337447 ACTATGGACGACGGTTTGGTG 60.337 52.381 0.00 0.00 0.00 4.17
2643 3114 0.971386 ACTATGGACGACGGTTTGGT 59.029 50.000 0.00 0.00 0.00 3.67
2644 3115 2.088950 AACTATGGACGACGGTTTGG 57.911 50.000 0.00 0.00 0.00 3.28
2648 3119 0.319083 TGCAAACTATGGACGACGGT 59.681 50.000 0.00 0.00 0.00 4.83
3145 5649 8.562892 TGTTCTCAGATTTTGTTTTTGCAAAAA 58.437 25.926 28.85 28.85 46.91 1.94
3665 6228 1.992233 GCAAGGAATCGATTGGCGCA 61.992 55.000 16.96 0.00 40.61 6.09
3725 6288 0.457443 TGCTACGAGATCTGTGCTGG 59.543 55.000 0.00 0.00 0.00 4.85
3728 6291 2.498807 TCATGCTACGAGATCTGTGC 57.501 50.000 0.00 6.41 0.00 4.57
3739 6302 3.521560 TCTGTTCGTTGGATCATGCTAC 58.478 45.455 0.00 0.00 0.00 3.58
3740 6303 3.885724 TCTGTTCGTTGGATCATGCTA 57.114 42.857 0.00 0.00 0.00 3.49
3768 6331 6.860023 CAGCTGACTTTTTATTTTCTGGTCAG 59.140 38.462 8.42 13.62 46.57 3.51
3881 6518 7.294584 TCCCTTTTCCTCATACTCTTTGAAAA 58.705 34.615 0.00 0.00 32.59 2.29
3896 6533 5.708736 ACCACAAAATTTTCCCTTTTCCT 57.291 34.783 0.00 0.00 0.00 3.36
3941 6582 0.319813 GAACCATGCCCTGCAACAAC 60.320 55.000 0.00 0.00 43.62 3.32
4301 6942 0.179161 CCACGTAGAAGAGCACGAGG 60.179 60.000 0.62 0.00 41.32 4.63
5329 8021 4.552365 CGCCGGCCACCATCTCAT 62.552 66.667 23.46 0.00 0.00 2.90
5454 8146 9.635404 ATTTCGATCCATAAAGGTTGGTTTATA 57.365 29.630 0.00 0.00 39.02 0.98
5455 8147 7.948034 TTTCGATCCATAAAGGTTGGTTTAT 57.052 32.000 0.00 0.00 39.02 1.40
5471 8163 3.247648 CCATTACACGTGGATTTCGATCC 59.752 47.826 21.57 0.00 39.12 3.36
5476 8168 8.973835 TTTTTATTCCATTACACGTGGATTTC 57.026 30.769 21.57 0.00 44.75 2.17
5516 8209 5.696724 CGGAATCTATACACCTGGTTGATTC 59.303 44.000 18.04 18.04 37.98 2.52
5533 8226 1.414181 ACATTCGCTGGATCGGAATCT 59.586 47.619 0.00 0.00 32.12 2.40
5536 8229 0.534873 TCACATTCGCTGGATCGGAA 59.465 50.000 0.00 0.00 0.00 4.30
5537 8230 0.534873 TTCACATTCGCTGGATCGGA 59.465 50.000 0.00 0.00 0.00 4.55
5538 8231 1.368641 TTTCACATTCGCTGGATCGG 58.631 50.000 0.00 0.00 0.00 4.18
5577 8270 0.299003 GCAGAGCAACTAATCGCGAC 59.701 55.000 12.93 0.00 0.00 5.19
5582 8275 4.457257 ACTTTCAAGGCAGAGCAACTAATC 59.543 41.667 0.00 0.00 0.00 1.75
5631 8325 1.561076 AGCTGTGGAGGATACAATGCA 59.439 47.619 0.00 0.00 41.41 3.96
5715 9865 3.969265 CCCAAAGGACTTGCTCTTGCAG 61.969 54.545 0.00 0.00 43.02 4.41
5735 9885 0.750850 TTGGAGGCTATAGCGTGACC 59.249 55.000 23.80 18.80 43.26 4.02
5762 9912 4.527038 GGTGATAGAAGGGATAACCGATGA 59.473 45.833 0.00 0.00 46.96 2.92
5830 9981 4.008933 AAAGGAGCTGCCGCGACT 62.009 61.111 8.23 0.00 43.43 4.18
5832 9983 2.443260 TAACAAAGGAGCTGCCGCGA 62.443 55.000 8.23 0.00 43.43 5.87
5986 10144 2.611751 TCACCAGTTCATCACACGTTTG 59.388 45.455 0.00 0.00 0.00 2.93
6012 10170 5.255397 TGAAATCTTTCAAAGCCCCTAGA 57.745 39.130 2.94 0.00 43.62 2.43
6039 10197 0.398318 GGCGAGGAGGAAGGCAATAT 59.602 55.000 0.00 0.00 0.00 1.28
6096 10254 0.301687 CTCGGTATCGCATGCAACAC 59.698 55.000 19.57 11.01 36.13 3.32
6097 10255 0.108377 ACTCGGTATCGCATGCAACA 60.108 50.000 19.57 0.28 36.13 3.33
6161 10319 4.262463 GGAACTGGCGGAATATCTATGTGA 60.262 45.833 0.00 0.00 0.00 3.58
6171 10329 0.684153 CAATGGGGAACTGGCGGAAT 60.684 55.000 0.00 0.00 0.00 3.01
6195 10353 7.852945 CGAGAAATTGCCTATTTACTCAACATC 59.147 37.037 0.00 0.00 36.59 3.06
6196 10354 7.552687 TCGAGAAATTGCCTATTTACTCAACAT 59.447 33.333 0.00 0.00 36.59 2.71
6197 10355 6.876789 TCGAGAAATTGCCTATTTACTCAACA 59.123 34.615 0.00 0.00 36.59 3.33
6198 10356 7.303634 TCGAGAAATTGCCTATTTACTCAAC 57.696 36.000 0.00 0.00 36.59 3.18
6199 10357 8.506168 AATCGAGAAATTGCCTATTTACTCAA 57.494 30.769 0.00 0.00 36.59 3.02
6200 10358 9.607988 TTAATCGAGAAATTGCCTATTTACTCA 57.392 29.630 0.00 0.00 36.59 3.41
6209 10367 8.912988 TGGATTAATTTAATCGAGAAATTGCCT 58.087 29.630 22.08 11.75 44.24 4.75
6210 10368 8.968242 GTGGATTAATTTAATCGAGAAATTGCC 58.032 33.333 22.08 19.77 44.24 4.52
6211 10369 9.515020 TGTGGATTAATTTAATCGAGAAATTGC 57.485 29.630 22.08 14.50 44.24 3.56
6230 10388 8.143835 GCCATGCTAGTAATTTATTTGTGGATT 58.856 33.333 0.00 0.00 0.00 3.01
6231 10389 7.287466 TGCCATGCTAGTAATTTATTTGTGGAT 59.713 33.333 0.00 0.00 0.00 3.41
6232 10390 6.605194 TGCCATGCTAGTAATTTATTTGTGGA 59.395 34.615 0.00 0.00 0.00 4.02
6233 10391 6.804677 TGCCATGCTAGTAATTTATTTGTGG 58.195 36.000 0.00 0.00 0.00 4.17
6234 10392 8.757789 CAATGCCATGCTAGTAATTTATTTGTG 58.242 33.333 0.00 0.00 0.00 3.33
6235 10393 8.694540 TCAATGCCATGCTAGTAATTTATTTGT 58.305 29.630 0.00 0.00 0.00 2.83
6236 10394 8.971321 GTCAATGCCATGCTAGTAATTTATTTG 58.029 33.333 0.00 0.00 0.00 2.32
6237 10395 8.694540 TGTCAATGCCATGCTAGTAATTTATTT 58.305 29.630 0.00 0.00 0.00 1.40
6238 10396 8.236585 TGTCAATGCCATGCTAGTAATTTATT 57.763 30.769 0.00 0.00 0.00 1.40
6239 10397 7.822161 TGTCAATGCCATGCTAGTAATTTAT 57.178 32.000 0.00 0.00 0.00 1.40
6240 10398 7.822161 ATGTCAATGCCATGCTAGTAATTTA 57.178 32.000 0.00 0.00 0.00 1.40
6241 10399 6.720112 ATGTCAATGCCATGCTAGTAATTT 57.280 33.333 0.00 0.00 0.00 1.82
6242 10400 7.822161 TTATGTCAATGCCATGCTAGTAATT 57.178 32.000 0.00 0.00 0.00 1.40
6243 10401 7.822161 TTTATGTCAATGCCATGCTAGTAAT 57.178 32.000 0.00 0.00 0.00 1.89
6244 10402 7.822161 ATTTATGTCAATGCCATGCTAGTAA 57.178 32.000 0.00 0.00 0.00 2.24
6245 10403 8.916628 TTATTTATGTCAATGCCATGCTAGTA 57.083 30.769 0.00 0.00 0.00 1.82
6246 10404 7.822161 TTATTTATGTCAATGCCATGCTAGT 57.178 32.000 0.00 0.00 0.00 2.57
6247 10405 7.324375 CGTTTATTTATGTCAATGCCATGCTAG 59.676 37.037 0.00 0.00 0.00 3.42
6248 10406 7.138081 CGTTTATTTATGTCAATGCCATGCTA 58.862 34.615 0.00 0.00 0.00 3.49
6249 10407 5.978919 CGTTTATTTATGTCAATGCCATGCT 59.021 36.000 0.00 0.00 0.00 3.79
6250 10408 5.332506 GCGTTTATTTATGTCAATGCCATGC 60.333 40.000 0.00 0.00 0.00 4.06
6251 10409 5.747675 TGCGTTTATTTATGTCAATGCCATG 59.252 36.000 0.00 0.00 31.30 3.66
6252 10410 5.900425 TGCGTTTATTTATGTCAATGCCAT 58.100 33.333 0.00 0.00 31.30 4.40
6253 10411 5.316327 TGCGTTTATTTATGTCAATGCCA 57.684 34.783 0.00 0.00 31.30 4.92
6254 10412 7.113404 CAGTATGCGTTTATTTATGTCAATGCC 59.887 37.037 0.00 0.00 31.30 4.40
6255 10413 7.855409 TCAGTATGCGTTTATTTATGTCAATGC 59.145 33.333 0.00 0.00 34.76 3.56
6256 10414 9.882996 ATCAGTATGCGTTTATTTATGTCAATG 57.117 29.630 0.00 0.00 34.76 2.82
6262 10420 9.689075 CCGAATATCAGTATGCGTTTATTTATG 57.311 33.333 0.00 0.00 37.61 1.90
6263 10421 9.431887 ACCGAATATCAGTATGCGTTTATTTAT 57.568 29.630 0.00 0.00 37.61 1.40
6264 10422 8.821147 ACCGAATATCAGTATGCGTTTATTTA 57.179 30.769 0.00 0.00 37.61 1.40
6265 10423 7.439955 TGACCGAATATCAGTATGCGTTTATTT 59.560 33.333 0.00 0.00 37.61 1.40
6266 10424 6.926826 TGACCGAATATCAGTATGCGTTTATT 59.073 34.615 0.00 0.00 37.61 1.40
6267 10425 6.452242 TGACCGAATATCAGTATGCGTTTAT 58.548 36.000 0.00 0.00 37.61 1.40
6268 10426 5.834169 TGACCGAATATCAGTATGCGTTTA 58.166 37.500 0.00 0.00 37.61 2.01
6269 10427 4.689071 TGACCGAATATCAGTATGCGTTT 58.311 39.130 0.00 0.00 37.61 3.60
6270 10428 4.316205 TGACCGAATATCAGTATGCGTT 57.684 40.909 0.00 0.00 37.61 4.84
6271 10429 4.299155 CTTGACCGAATATCAGTATGCGT 58.701 43.478 0.00 0.00 37.61 5.24
6272 10430 3.121944 GCTTGACCGAATATCAGTATGCG 59.878 47.826 0.00 0.00 38.78 4.73
6273 10431 4.310769 AGCTTGACCGAATATCAGTATGC 58.689 43.478 0.00 0.00 34.76 3.14
6274 10432 5.574830 GCTAGCTTGACCGAATATCAGTATG 59.425 44.000 7.70 0.00 37.54 2.39
6275 10433 5.243954 TGCTAGCTTGACCGAATATCAGTAT 59.756 40.000 17.23 0.00 0.00 2.12
6276 10434 4.583073 TGCTAGCTTGACCGAATATCAGTA 59.417 41.667 17.23 0.00 0.00 2.74
6277 10435 3.384789 TGCTAGCTTGACCGAATATCAGT 59.615 43.478 17.23 0.00 0.00 3.41
6278 10436 3.738282 GTGCTAGCTTGACCGAATATCAG 59.262 47.826 17.23 0.00 0.00 2.90
6279 10437 3.132111 TGTGCTAGCTTGACCGAATATCA 59.868 43.478 17.23 0.00 0.00 2.15
6280 10438 3.717707 TGTGCTAGCTTGACCGAATATC 58.282 45.455 17.23 0.00 0.00 1.63
6281 10439 3.819564 TGTGCTAGCTTGACCGAATAT 57.180 42.857 17.23 0.00 0.00 1.28
6282 10440 3.819564 ATGTGCTAGCTTGACCGAATA 57.180 42.857 17.23 0.00 0.00 1.75
6283 10441 2.698855 ATGTGCTAGCTTGACCGAAT 57.301 45.000 17.23 0.00 0.00 3.34
6284 10442 2.496070 AGTATGTGCTAGCTTGACCGAA 59.504 45.455 17.23 0.00 0.00 4.30
6285 10443 2.100197 AGTATGTGCTAGCTTGACCGA 58.900 47.619 17.23 0.00 0.00 4.69
6286 10444 2.586258 AGTATGTGCTAGCTTGACCG 57.414 50.000 17.23 0.00 0.00 4.79
6287 10445 3.372954 CGTAGTATGTGCTAGCTTGACC 58.627 50.000 17.23 1.25 0.00 4.02
6288 10446 2.789893 GCGTAGTATGTGCTAGCTTGAC 59.210 50.000 17.23 6.50 0.00 3.18
6289 10447 2.688446 AGCGTAGTATGTGCTAGCTTGA 59.312 45.455 17.23 0.00 37.15 3.02
6290 10448 3.085443 AGCGTAGTATGTGCTAGCTTG 57.915 47.619 17.23 0.00 37.15 4.01
6291 10449 4.913335 TTAGCGTAGTATGTGCTAGCTT 57.087 40.909 17.23 3.47 41.75 3.74
6292 10450 5.223382 CAATTAGCGTAGTATGTGCTAGCT 58.777 41.667 17.23 0.00 41.75 3.32
6293 10451 4.143305 GCAATTAGCGTAGTATGTGCTAGC 60.143 45.833 8.10 8.10 41.75 3.42
6294 10452 5.502214 GCAATTAGCGTAGTATGTGCTAG 57.498 43.478 0.00 0.00 41.75 3.42
6308 10466 5.975410 ACGTAGATCTTTCTGCAATTAGC 57.025 39.130 0.00 0.00 45.96 3.09
6311 10469 8.942338 TGTTATACGTAGATCTTTCTGCAATT 57.058 30.769 0.00 0.00 34.53 2.32
6312 10470 8.942338 TTGTTATACGTAGATCTTTCTGCAAT 57.058 30.769 0.00 0.00 34.53 3.56
6313 10471 8.942338 ATTGTTATACGTAGATCTTTCTGCAA 57.058 30.769 0.00 0.00 34.53 4.08
6320 10478 9.204570 GCCATGTTATTGTTATACGTAGATCTT 57.795 33.333 0.00 0.00 0.00 2.40
6321 10479 8.585881 AGCCATGTTATTGTTATACGTAGATCT 58.414 33.333 0.00 0.00 0.00 2.75
6322 10480 8.758633 AGCCATGTTATTGTTATACGTAGATC 57.241 34.615 0.08 0.00 0.00 2.75
6327 10485 8.948145 TGTTTTAGCCATGTTATTGTTATACGT 58.052 29.630 0.00 0.00 0.00 3.57
6328 10486 9.433317 CTGTTTTAGCCATGTTATTGTTATACG 57.567 33.333 0.00 0.00 0.00 3.06
6333 10491 9.040939 GTTTTCTGTTTTAGCCATGTTATTGTT 57.959 29.630 0.00 0.00 0.00 2.83
6334 10492 8.200792 TGTTTTCTGTTTTAGCCATGTTATTGT 58.799 29.630 0.00 0.00 0.00 2.71
6335 10493 8.586570 TGTTTTCTGTTTTAGCCATGTTATTG 57.413 30.769 0.00 0.00 0.00 1.90
6336 10494 8.421002 ACTGTTTTCTGTTTTAGCCATGTTATT 58.579 29.630 0.00 0.00 0.00 1.40
6337 10495 7.951591 ACTGTTTTCTGTTTTAGCCATGTTAT 58.048 30.769 0.00 0.00 0.00 1.89
6338 10496 7.341445 ACTGTTTTCTGTTTTAGCCATGTTA 57.659 32.000 0.00 0.00 0.00 2.41
6339 10497 6.220726 ACTGTTTTCTGTTTTAGCCATGTT 57.779 33.333 0.00 0.00 0.00 2.71
6340 10498 5.852282 ACTGTTTTCTGTTTTAGCCATGT 57.148 34.783 0.00 0.00 0.00 3.21
6341 10499 6.206634 TCCTACTGTTTTCTGTTTTAGCCATG 59.793 38.462 0.00 0.00 34.05 3.66
6342 10500 6.303839 TCCTACTGTTTTCTGTTTTAGCCAT 58.696 36.000 0.00 0.00 34.05 4.40
6343 10501 5.686753 TCCTACTGTTTTCTGTTTTAGCCA 58.313 37.500 0.00 0.00 34.05 4.75
6344 10502 5.334957 GCTCCTACTGTTTTCTGTTTTAGCC 60.335 44.000 0.00 0.00 34.05 3.93
6345 10503 5.614887 CGCTCCTACTGTTTTCTGTTTTAGC 60.615 44.000 0.00 0.00 34.05 3.09
6346 10504 5.107065 CCGCTCCTACTGTTTTCTGTTTTAG 60.107 44.000 0.00 0.00 34.05 1.85
6347 10505 4.753107 CCGCTCCTACTGTTTTCTGTTTTA 59.247 41.667 0.00 0.00 34.05 1.52
6348 10506 3.564225 CCGCTCCTACTGTTTTCTGTTTT 59.436 43.478 0.00 0.00 34.05 2.43
6349 10507 3.139077 CCGCTCCTACTGTTTTCTGTTT 58.861 45.455 0.00 0.00 34.05 2.83
6350 10508 2.550208 CCCGCTCCTACTGTTTTCTGTT 60.550 50.000 0.00 0.00 34.05 3.16
6351 10509 1.002087 CCCGCTCCTACTGTTTTCTGT 59.998 52.381 0.00 0.00 36.09 3.41
6352 10510 1.275291 TCCCGCTCCTACTGTTTTCTG 59.725 52.381 0.00 0.00 0.00 3.02
6353 10511 1.640917 TCCCGCTCCTACTGTTTTCT 58.359 50.000 0.00 0.00 0.00 2.52
6354 10512 2.693267 ATCCCGCTCCTACTGTTTTC 57.307 50.000 0.00 0.00 0.00 2.29
6355 10513 4.259356 GTTTATCCCGCTCCTACTGTTTT 58.741 43.478 0.00 0.00 0.00 2.43
6356 10514 3.677976 CGTTTATCCCGCTCCTACTGTTT 60.678 47.826 0.00 0.00 0.00 2.83
6357 10515 2.159142 CGTTTATCCCGCTCCTACTGTT 60.159 50.000 0.00 0.00 0.00 3.16
6358 10516 1.407979 CGTTTATCCCGCTCCTACTGT 59.592 52.381 0.00 0.00 0.00 3.55
6359 10517 1.679680 TCGTTTATCCCGCTCCTACTG 59.320 52.381 0.00 0.00 0.00 2.74
6360 10518 1.955080 CTCGTTTATCCCGCTCCTACT 59.045 52.381 0.00 0.00 0.00 2.57
6361 10519 1.680207 ACTCGTTTATCCCGCTCCTAC 59.320 52.381 0.00 0.00 0.00 3.18
6362 10520 2.062971 ACTCGTTTATCCCGCTCCTA 57.937 50.000 0.00 0.00 0.00 2.94
6363 10521 1.192428 AACTCGTTTATCCCGCTCCT 58.808 50.000 0.00 0.00 0.00 3.69
6364 10522 2.877043 TAACTCGTTTATCCCGCTCC 57.123 50.000 0.00 0.00 0.00 4.70
6365 10523 4.233005 GGTATAACTCGTTTATCCCGCTC 58.767 47.826 0.00 0.00 32.31 5.03
6366 10524 3.006217 GGGTATAACTCGTTTATCCCGCT 59.994 47.826 0.00 0.00 32.41 5.52
6367 10525 3.006217 AGGGTATAACTCGTTTATCCCGC 59.994 47.826 14.11 8.31 39.82 6.13
6368 10526 4.321527 GGAGGGTATAACTCGTTTATCCCG 60.322 50.000 14.11 0.00 39.82 5.14
6369 10527 4.590222 TGGAGGGTATAACTCGTTTATCCC 59.410 45.833 13.15 13.15 37.57 3.85
6370 10528 5.303845 ACTGGAGGGTATAACTCGTTTATCC 59.696 44.000 0.00 0.00 35.82 2.59
6371 10529 6.402456 ACTGGAGGGTATAACTCGTTTATC 57.598 41.667 0.00 0.00 35.82 1.75
6372 10530 6.492772 CCTACTGGAGGGTATAACTCGTTTAT 59.507 42.308 0.00 0.00 42.39 1.40
6373 10531 5.829924 CCTACTGGAGGGTATAACTCGTTTA 59.170 44.000 0.00 0.00 42.39 2.01
6374 10532 4.648307 CCTACTGGAGGGTATAACTCGTTT 59.352 45.833 0.00 0.00 42.39 3.60
6375 10533 4.213513 CCTACTGGAGGGTATAACTCGTT 58.786 47.826 0.00 0.00 42.39 3.85
6376 10534 3.830121 CCTACTGGAGGGTATAACTCGT 58.170 50.000 0.00 0.00 42.39 4.18
6377 10535 2.557490 GCCTACTGGAGGGTATAACTCG 59.443 54.545 8.30 0.00 46.81 4.18
6378 10536 2.898612 GGCCTACTGGAGGGTATAACTC 59.101 54.545 8.30 0.00 46.81 3.01
6379 10537 2.249214 TGGCCTACTGGAGGGTATAACT 59.751 50.000 8.30 0.00 46.81 2.24
6380 10538 2.686119 TGGCCTACTGGAGGGTATAAC 58.314 52.381 8.30 0.00 46.81 1.89
6381 10539 3.248024 CATGGCCTACTGGAGGGTATAA 58.752 50.000 8.30 0.00 46.81 0.98
6382 10540 2.494627 CCATGGCCTACTGGAGGGTATA 60.495 54.545 8.30 0.00 46.81 1.47
6383 10541 1.734655 CATGGCCTACTGGAGGGTAT 58.265 55.000 8.30 0.00 46.81 2.73
6384 10542 0.399949 CCATGGCCTACTGGAGGGTA 60.400 60.000 8.30 0.00 46.81 3.69
6385 10543 1.694169 CCATGGCCTACTGGAGGGT 60.694 63.158 8.30 0.00 46.81 4.34
6386 10544 1.384502 TCCATGGCCTACTGGAGGG 60.385 63.158 15.63 0.79 46.81 4.30
6389 10547 0.399091 CCTCTCCATGGCCTACTGGA 60.399 60.000 17.73 17.73 39.23 3.86
6390 10548 2.049627 GCCTCTCCATGGCCTACTGG 62.050 65.000 6.96 8.83 44.32 4.00
6391 10549 1.449353 GCCTCTCCATGGCCTACTG 59.551 63.158 6.96 0.00 44.32 2.74
6392 10550 3.978164 GCCTCTCCATGGCCTACT 58.022 61.111 6.96 0.00 44.32 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.