Multiple sequence alignment - TraesCS7A01G457400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G457400 chr7A 100.000 3632 0 0 1 3632 652725527 652721896 0.000000e+00 6708.0
1 TraesCS7A01G457400 chr7D 87.285 1282 104 25 1 1268 566554946 566553710 0.000000e+00 1410.0
2 TraesCS7A01G457400 chr7D 86.646 951 71 20 2312 3230 566553210 566552284 0.000000e+00 1002.0
3 TraesCS7A01G457400 chr7D 91.793 329 13 6 3318 3632 566552243 566551915 2.570000e-121 446.0
4 TraesCS7A01G457400 chr7D 86.598 194 24 2 1514 1706 566553467 566553275 2.840000e-51 213.0
5 TraesCS7A01G457400 chr7B 86.290 1240 105 36 1 1206 620656607 620657815 0.000000e+00 1288.0
6 TraesCS7A01G457400 chr7B 84.988 806 72 24 2249 3012 620658557 620659355 0.000000e+00 773.0
7 TraesCS7A01G457400 chr7B 90.335 269 14 9 3376 3632 620659805 620660073 3.470000e-90 342.0
8 TraesCS7A01G457400 chr7B 85.417 192 20 5 2024 2214 620658366 620658550 3.700000e-45 193.0
9 TraesCS7A01G457400 chr6D 96.269 134 3 2 3500 3632 96827411 96827279 6.110000e-53 219.0
10 TraesCS7A01G457400 chr6B 96.241 133 5 0 3500 3632 179991768 179991636 6.110000e-53 219.0
11 TraesCS7A01G457400 chr6A 96.241 133 5 0 3500 3632 115831441 115831309 6.110000e-53 219.0
12 TraesCS7A01G457400 chr3A 90.476 63 6 0 2813 2875 532041326 532041264 2.320000e-12 84.2
13 TraesCS7A01G457400 chr3A 90.476 63 6 0 2813 2875 532066813 532066751 2.320000e-12 84.2
14 TraesCS7A01G457400 chr3A 90.476 63 6 0 2813 2875 532092617 532092555 2.320000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G457400 chr7A 652721896 652725527 3631 True 6708.00 6708 100.0000 1 3632 1 chr7A.!!$R1 3631
1 TraesCS7A01G457400 chr7D 566551915 566554946 3031 True 767.75 1410 88.0805 1 3632 4 chr7D.!!$R1 3631
2 TraesCS7A01G457400 chr7B 620656607 620660073 3466 False 649.00 1288 86.7575 1 3632 4 chr7B.!!$F1 3631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
922 974 0.179116 CTCGGTGACATCCAGCTCTG 60.179 60.0 0.0 0.0 40.94 3.35 F
1074 1126 0.107116 TAGTCACTCGGCTCTCCCTC 60.107 60.0 0.0 0.0 0.00 4.30 F
1822 1967 0.030638 CCACTTCACACCTTTTGCCG 59.969 55.0 0.0 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1803 1948 0.030638 CGGCAAAAGGTGTGAAGTGG 59.969 55.0 0.0 0.00 0.0 4.00 R
2135 2288 0.953471 TCTAACATGGCCGTGCACAC 60.953 55.0 25.3 8.06 0.0 3.82 R
3453 3934 0.677288 TCTTTTCGACGGGAGCTTGA 59.323 50.0 0.0 0.00 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 45 1.200020 GAATCCCGCAGTTCTTGTTGG 59.800 52.381 0.00 0.00 0.00 3.77
70 72 5.453587 GCTGCAAGATGAAACTTATTAAGCG 59.546 40.000 3.28 0.00 34.07 4.68
75 77 6.345920 AGATGAAACTTATTAAGCGTTCCG 57.654 37.500 13.72 0.00 0.00 4.30
113 118 6.080406 GGAACAATCGAACTGAATCTTCAAC 58.920 40.000 4.99 0.00 36.64 3.18
135 140 1.077663 ACATCCATTGCACCTTCCCTT 59.922 47.619 0.00 0.00 0.00 3.95
151 156 1.089920 CCTTGAGAACAATGCCCTCG 58.910 55.000 0.00 0.00 35.37 4.63
164 169 1.349688 TGCCCTCGTCTGTTTTACCAT 59.650 47.619 0.00 0.00 0.00 3.55
176 181 7.355778 GTCTGTTTTACCATCTCAGAAAGTTG 58.644 38.462 0.00 0.00 37.00 3.16
208 213 0.769873 CCTATCCCAGGCTGAGCAAT 59.230 55.000 17.94 6.13 37.70 3.56
261 266 4.414337 AGCAGAAACATCCCATCTCTAC 57.586 45.455 0.00 0.00 0.00 2.59
262 267 3.776969 AGCAGAAACATCCCATCTCTACA 59.223 43.478 0.00 0.00 0.00 2.74
263 268 4.225942 AGCAGAAACATCCCATCTCTACAA 59.774 41.667 0.00 0.00 0.00 2.41
332 348 1.003718 AGACCCTAAGCGCGCTTTT 60.004 52.632 46.40 29.64 37.47 2.27
333 349 0.605589 AGACCCTAAGCGCGCTTTTT 60.606 50.000 46.40 28.87 37.47 1.94
334 350 1.081094 GACCCTAAGCGCGCTTTTTA 58.919 50.000 46.40 30.02 37.47 1.52
335 351 1.669265 GACCCTAAGCGCGCTTTTTAT 59.331 47.619 46.40 30.58 37.47 1.40
336 352 2.089201 ACCCTAAGCGCGCTTTTTATT 58.911 42.857 46.40 27.32 37.47 1.40
404 432 6.284891 ACACATGATTTAAGGAAACCATGG 57.715 37.500 11.19 11.19 37.02 3.66
558 586 1.528309 CGCCTGTCAAACCCTTGGT 60.528 57.895 0.00 0.00 37.65 3.67
560 588 1.244816 GCCTGTCAAACCCTTGGTAC 58.755 55.000 0.00 0.00 33.12 3.34
585 613 2.918276 GGGCTAGGGCGAGGGTAG 60.918 72.222 0.00 0.00 39.81 3.18
838 889 3.986116 GAGCCCCGACCCCTTCTCT 62.986 68.421 0.00 0.00 0.00 3.10
839 890 3.009714 GCCCCGACCCCTTCTCTT 61.010 66.667 0.00 0.00 0.00 2.85
845 896 1.331399 CGACCCCTTCTCTTCTCCCC 61.331 65.000 0.00 0.00 0.00 4.81
916 968 3.284336 CGTCCTCGGTGACATCCA 58.716 61.111 6.15 0.00 34.88 3.41
917 969 1.139734 CGTCCTCGGTGACATCCAG 59.860 63.158 6.15 0.00 34.88 3.86
918 970 1.153549 GTCCTCGGTGACATCCAGC 60.154 63.158 1.09 0.00 39.77 4.85
919 971 1.305297 TCCTCGGTGACATCCAGCT 60.305 57.895 0.00 0.00 40.94 4.24
920 972 1.142748 CCTCGGTGACATCCAGCTC 59.857 63.158 0.00 0.00 40.94 4.09
921 973 1.326213 CCTCGGTGACATCCAGCTCT 61.326 60.000 0.00 0.00 40.94 4.09
922 974 0.179116 CTCGGTGACATCCAGCTCTG 60.179 60.000 0.00 0.00 40.94 3.35
923 975 1.812922 CGGTGACATCCAGCTCTGC 60.813 63.158 0.00 0.00 40.94 4.26
926 978 2.202987 GACATCCAGCTCTGCCCG 60.203 66.667 0.00 0.00 0.00 6.13
927 979 2.685017 ACATCCAGCTCTGCCCGA 60.685 61.111 0.00 0.00 0.00 5.14
928 980 2.108566 CATCCAGCTCTGCCCGAG 59.891 66.667 0.00 0.00 42.88 4.63
934 986 3.219928 GCTCTGCCCGAGATCCGA 61.220 66.667 4.46 0.00 42.62 4.55
960 1012 1.191489 TTCGTCCACAGGCTGATCCA 61.191 55.000 23.66 0.00 37.29 3.41
1074 1126 0.107116 TAGTCACTCGGCTCTCCCTC 60.107 60.000 0.00 0.00 0.00 4.30
1099 1151 1.464997 GCGTCCAACCTTGTGATTCTC 59.535 52.381 0.00 0.00 0.00 2.87
1131 1183 3.070076 TCGCGGTCGATGTAGTAGT 57.930 52.632 6.13 0.00 40.21 2.73
1132 1184 0.654160 TCGCGGTCGATGTAGTAGTG 59.346 55.000 6.13 0.00 40.21 2.74
1133 1185 0.928908 CGCGGTCGATGTAGTAGTGC 60.929 60.000 0.00 0.00 38.10 4.40
1134 1186 0.381089 GCGGTCGATGTAGTAGTGCT 59.619 55.000 0.00 0.00 0.00 4.40
1136 1188 2.032550 GCGGTCGATGTAGTAGTGCTTA 59.967 50.000 0.00 0.00 0.00 3.09
1137 1189 3.304525 GCGGTCGATGTAGTAGTGCTTAT 60.305 47.826 0.00 0.00 0.00 1.73
1149 1201 2.043227 AGTGCTTATCTAGGTCTGGGC 58.957 52.381 0.00 0.00 0.00 5.36
1210 1262 0.328258 CCAGGAATTCCCCACTCGTT 59.672 55.000 21.22 0.00 36.42 3.85
1220 1272 2.946990 TCCCCACTCGTTTCTGTTTTTC 59.053 45.455 0.00 0.00 0.00 2.29
1221 1273 2.949644 CCCCACTCGTTTCTGTTTTTCT 59.050 45.455 0.00 0.00 0.00 2.52
1222 1274 3.243068 CCCCACTCGTTTCTGTTTTTCTG 60.243 47.826 0.00 0.00 0.00 3.02
1223 1275 3.377172 CCCACTCGTTTCTGTTTTTCTGT 59.623 43.478 0.00 0.00 0.00 3.41
1224 1276 4.142469 CCCACTCGTTTCTGTTTTTCTGTT 60.142 41.667 0.00 0.00 0.00 3.16
1225 1277 5.399013 CCACTCGTTTCTGTTTTTCTGTTT 58.601 37.500 0.00 0.00 0.00 2.83
1226 1278 5.286082 CCACTCGTTTCTGTTTTTCTGTTTG 59.714 40.000 0.00 0.00 0.00 2.93
1227 1279 6.083630 CACTCGTTTCTGTTTTTCTGTTTGA 58.916 36.000 0.00 0.00 0.00 2.69
1238 1290 2.205022 TCTGTTTGATTGAGGGGCAG 57.795 50.000 0.00 0.00 0.00 4.85
1257 1309 1.067283 AGAGACGTCAGAATGGCACAG 60.067 52.381 19.50 0.00 44.43 3.66
1262 1314 1.204704 CGTCAGAATGGCACAGACCTA 59.795 52.381 0.00 0.00 44.43 3.08
1264 1316 4.287692 CGTCAGAATGGCACAGACCTATG 61.288 52.174 0.00 0.00 44.43 2.23
1270 1349 1.337728 TGGCACAGACCTATGTCGTTG 60.338 52.381 0.00 0.00 46.51 4.10
1278 1393 1.346395 ACCTATGTCGTTGCCTGTTGA 59.654 47.619 0.00 0.00 0.00 3.18
1283 1398 2.355197 TGTCGTTGCCTGTTGATATGG 58.645 47.619 0.00 0.00 0.00 2.74
1295 1410 7.229306 TGCCTGTTGATATGGTATTTCTTGATC 59.771 37.037 0.00 0.00 0.00 2.92
1296 1411 7.308830 GCCTGTTGATATGGTATTTCTTGATCC 60.309 40.741 0.00 0.00 0.00 3.36
1297 1412 7.720957 CCTGTTGATATGGTATTTCTTGATCCA 59.279 37.037 0.00 0.00 0.00 3.41
1298 1413 9.293404 CTGTTGATATGGTATTTCTTGATCCAT 57.707 33.333 0.00 0.00 41.10 3.41
1299 1414 9.070179 TGTTGATATGGTATTTCTTGATCCATG 57.930 33.333 0.00 0.00 38.97 3.66
1301 1416 7.464273 TGATATGGTATTTCTTGATCCATGCT 58.536 34.615 0.00 0.00 38.97 3.79
1302 1417 8.605065 TGATATGGTATTTCTTGATCCATGCTA 58.395 33.333 0.00 0.00 38.97 3.49
1303 1418 9.624373 GATATGGTATTTCTTGATCCATGCTAT 57.376 33.333 0.00 0.00 38.97 2.97
1304 1419 7.698506 ATGGTATTTCTTGATCCATGCTATG 57.301 36.000 0.00 0.00 37.48 2.23
1305 1420 6.840527 TGGTATTTCTTGATCCATGCTATGA 58.159 36.000 0.00 0.00 0.00 2.15
1306 1421 6.938596 TGGTATTTCTTGATCCATGCTATGAG 59.061 38.462 0.00 0.00 0.00 2.90
1307 1422 6.373774 GGTATTTCTTGATCCATGCTATGAGG 59.626 42.308 0.00 0.00 0.00 3.86
1308 1423 3.413846 TCTTGATCCATGCTATGAGGC 57.586 47.619 0.00 0.00 0.00 4.70
1309 1424 2.039480 TCTTGATCCATGCTATGAGGCC 59.961 50.000 0.00 0.00 0.00 5.19
1310 1425 1.437397 TGATCCATGCTATGAGGCCA 58.563 50.000 5.01 0.00 0.00 5.36
1311 1426 1.072806 TGATCCATGCTATGAGGCCAC 59.927 52.381 5.01 0.00 0.00 5.01
1312 1427 1.072806 GATCCATGCTATGAGGCCACA 59.927 52.381 4.98 4.98 0.00 4.17
1313 1428 0.918258 TCCATGCTATGAGGCCACAA 59.082 50.000 7.05 0.00 0.00 3.33
1314 1429 1.284491 TCCATGCTATGAGGCCACAAA 59.716 47.619 7.05 0.00 0.00 2.83
1315 1430 1.679680 CCATGCTATGAGGCCACAAAG 59.320 52.381 7.05 0.00 0.00 2.77
1337 1452 9.398170 CAAAGTACTGTAAAATCAGAAATGGTG 57.602 33.333 0.00 0.00 38.63 4.17
1341 1456 6.970484 ACTGTAAAATCAGAAATGGTGTCAC 58.030 36.000 0.00 0.00 38.63 3.67
1354 1469 2.218603 GGTGTCACATTCACGAAACCT 58.781 47.619 5.12 0.00 36.69 3.50
1355 1470 2.032030 GGTGTCACATTCACGAAACCTG 60.032 50.000 5.12 0.00 36.69 4.00
1357 1472 3.059597 GTGTCACATTCACGAAACCTGAG 60.060 47.826 0.00 0.00 0.00 3.35
1373 1488 3.976654 ACCTGAGCTTATGGACATGGTAT 59.023 43.478 0.00 0.00 0.00 2.73
1389 1504 5.891551 ACATGGTATGATGTAACTTTTCCCC 59.108 40.000 0.00 0.00 34.69 4.81
1394 1509 6.715264 GGTATGATGTAACTTTTCCCCCATAG 59.285 42.308 0.00 0.00 0.00 2.23
1395 1510 5.789574 TGATGTAACTTTTCCCCCATAGT 57.210 39.130 0.00 0.00 0.00 2.12
1396 1511 6.894735 TGATGTAACTTTTCCCCCATAGTA 57.105 37.500 0.00 0.00 0.00 1.82
1402 1517 6.402981 AACTTTTCCCCCATAGTAACTCAT 57.597 37.500 0.00 0.00 0.00 2.90
1405 1520 6.906901 ACTTTTCCCCCATAGTAACTCATAGA 59.093 38.462 0.00 0.00 0.00 1.98
1406 1521 7.572861 ACTTTTCCCCCATAGTAACTCATAGAT 59.427 37.037 0.00 0.00 0.00 1.98
1407 1522 6.935240 TTCCCCCATAGTAACTCATAGATG 57.065 41.667 0.00 0.00 0.00 2.90
1408 1523 5.977533 TCCCCCATAGTAACTCATAGATGT 58.022 41.667 0.00 0.00 0.00 3.06
1409 1524 5.780282 TCCCCCATAGTAACTCATAGATGTG 59.220 44.000 0.00 0.00 0.00 3.21
1410 1525 5.780282 CCCCCATAGTAACTCATAGATGTGA 59.220 44.000 0.00 0.00 0.00 3.58
1421 1536 7.563888 ACTCATAGATGTGAATGTGATTTGG 57.436 36.000 0.00 0.00 0.00 3.28
1426 1541 4.468510 AGATGTGAATGTGATTTGGGCATT 59.531 37.500 0.00 0.00 35.78 3.56
1428 1543 5.735285 TGTGAATGTGATTTGGGCATTAA 57.265 34.783 0.00 0.00 33.56 1.40
1429 1544 5.722263 TGTGAATGTGATTTGGGCATTAAG 58.278 37.500 0.00 0.00 33.56 1.85
1442 1557 2.369394 GCATTAAGCACACTAGGCCTT 58.631 47.619 12.58 0.00 44.79 4.35
1444 1559 3.609853 CATTAAGCACACTAGGCCTTCA 58.390 45.455 12.58 0.00 0.00 3.02
1445 1560 3.334583 TTAAGCACACTAGGCCTTCAG 57.665 47.619 12.58 5.58 0.00 3.02
1448 1563 1.160137 GCACACTAGGCCTTCAGTTG 58.840 55.000 12.58 11.38 0.00 3.16
1461 1576 3.931468 CCTTCAGTTGCTCTACTGTCATG 59.069 47.826 10.33 0.00 44.62 3.07
1463 1578 4.607293 TCAGTTGCTCTACTGTCATGTT 57.393 40.909 10.33 0.00 44.62 2.71
1467 1582 3.876274 TGCTCTACTGTCATGTTCCTC 57.124 47.619 0.00 0.00 0.00 3.71
1477 1592 2.749621 GTCATGTTCCTCAACCATCACC 59.250 50.000 0.00 0.00 0.00 4.02
1478 1593 2.094675 CATGTTCCTCAACCATCACCC 58.905 52.381 0.00 0.00 0.00 4.61
1479 1594 1.444933 TGTTCCTCAACCATCACCCT 58.555 50.000 0.00 0.00 0.00 4.34
1480 1595 1.780309 TGTTCCTCAACCATCACCCTT 59.220 47.619 0.00 0.00 0.00 3.95
1510 1626 2.708051 ACAATCCTGTGAGATGTGCAG 58.292 47.619 0.00 0.00 33.30 4.41
1512 1628 0.107312 ATCCTGTGAGATGTGCAGGC 60.107 55.000 5.05 0.00 46.82 4.85
1513 1629 1.748122 CCTGTGAGATGTGCAGGCC 60.748 63.158 0.00 0.00 42.54 5.19
1514 1630 1.002990 CTGTGAGATGTGCAGGCCA 60.003 57.895 5.01 0.00 0.00 5.36
1515 1631 0.393944 CTGTGAGATGTGCAGGCCAT 60.394 55.000 5.01 0.00 0.00 4.40
1516 1632 0.911053 TGTGAGATGTGCAGGCCATA 59.089 50.000 5.01 0.00 0.00 2.74
1517 1633 1.491754 TGTGAGATGTGCAGGCCATAT 59.508 47.619 5.01 0.00 0.00 1.78
1519 1635 3.136260 TGTGAGATGTGCAGGCCATATTA 59.864 43.478 5.01 0.00 0.00 0.98
1521 1637 3.647590 TGAGATGTGCAGGCCATATTAGA 59.352 43.478 5.01 0.00 0.00 2.10
1522 1638 4.102996 TGAGATGTGCAGGCCATATTAGAA 59.897 41.667 5.01 0.00 0.00 2.10
1525 1670 6.782986 AGATGTGCAGGCCATATTAGAATAA 58.217 36.000 5.01 0.00 0.00 1.40
1546 1691 8.519492 AATAATGAATTGTGTAAACAGTGTGC 57.481 30.769 0.00 0.00 0.00 4.57
1549 1694 4.397730 TGAATTGTGTAAACAGTGTGCAGT 59.602 37.500 0.00 0.00 0.00 4.40
1550 1695 4.981806 ATTGTGTAAACAGTGTGCAGTT 57.018 36.364 0.00 0.00 0.00 3.16
1551 1696 3.755965 TGTGTAAACAGTGTGCAGTTG 57.244 42.857 0.00 0.00 0.00 3.16
1557 1702 3.764885 AACAGTGTGCAGTTGAAAGTC 57.235 42.857 0.00 0.00 0.00 3.01
1559 1704 1.334869 CAGTGTGCAGTTGAAAGTCCC 59.665 52.381 0.00 0.00 0.00 4.46
1560 1705 1.212935 AGTGTGCAGTTGAAAGTCCCT 59.787 47.619 0.00 0.00 0.00 4.20
1563 1708 2.297701 GTGCAGTTGAAAGTCCCTTGA 58.702 47.619 0.00 0.00 0.00 3.02
1567 1712 3.319122 GCAGTTGAAAGTCCCTTGAACAT 59.681 43.478 0.00 0.00 0.00 2.71
1568 1713 4.794003 GCAGTTGAAAGTCCCTTGAACATG 60.794 45.833 0.00 0.00 0.00 3.21
1569 1714 3.891366 AGTTGAAAGTCCCTTGAACATGG 59.109 43.478 0.00 0.00 0.00 3.66
1575 1720 0.251297 TCCCTTGAACATGGGCTGTG 60.251 55.000 17.50 0.00 43.48 3.66
1590 1735 3.826729 GGGCTGTGGATTTGTAGACTTTT 59.173 43.478 0.00 0.00 0.00 2.27
1591 1736 4.321230 GGGCTGTGGATTTGTAGACTTTTG 60.321 45.833 0.00 0.00 0.00 2.44
1592 1737 4.229876 GCTGTGGATTTGTAGACTTTTGC 58.770 43.478 0.00 0.00 0.00 3.68
1593 1738 4.022849 GCTGTGGATTTGTAGACTTTTGCT 60.023 41.667 0.00 0.00 0.00 3.91
1596 1741 5.221224 TGTGGATTTGTAGACTTTTGCTTGG 60.221 40.000 0.00 0.00 0.00 3.61
1598 1743 5.596361 TGGATTTGTAGACTTTTGCTTGGAA 59.404 36.000 0.00 0.00 0.00 3.53
1603 1748 7.759489 TTGTAGACTTTTGCTTGGAATATGT 57.241 32.000 0.00 0.00 0.00 2.29
1604 1749 7.144722 TGTAGACTTTTGCTTGGAATATGTG 57.855 36.000 0.00 0.00 0.00 3.21
1605 1750 6.939730 TGTAGACTTTTGCTTGGAATATGTGA 59.060 34.615 0.00 0.00 0.00 3.58
1606 1751 6.506500 AGACTTTTGCTTGGAATATGTGAG 57.493 37.500 0.00 0.00 0.00 3.51
1608 1753 6.888632 AGACTTTTGCTTGGAATATGTGAGAT 59.111 34.615 0.00 0.00 0.00 2.75
1609 1754 6.860080 ACTTTTGCTTGGAATATGTGAGATG 58.140 36.000 0.00 0.00 0.00 2.90
1611 1756 7.341256 ACTTTTGCTTGGAATATGTGAGATGAT 59.659 33.333 0.00 0.00 0.00 2.45
1612 1757 6.628919 TTGCTTGGAATATGTGAGATGATG 57.371 37.500 0.00 0.00 0.00 3.07
1613 1758 5.932455 TGCTTGGAATATGTGAGATGATGA 58.068 37.500 0.00 0.00 0.00 2.92
1614 1759 6.358991 TGCTTGGAATATGTGAGATGATGAA 58.641 36.000 0.00 0.00 0.00 2.57
1615 1760 6.261603 TGCTTGGAATATGTGAGATGATGAAC 59.738 38.462 0.00 0.00 0.00 3.18
1616 1761 6.485984 GCTTGGAATATGTGAGATGATGAACT 59.514 38.462 0.00 0.00 0.00 3.01
1617 1762 7.013083 GCTTGGAATATGTGAGATGATGAACTT 59.987 37.037 0.00 0.00 0.00 2.66
1618 1763 9.551734 CTTGGAATATGTGAGATGATGAACTTA 57.448 33.333 0.00 0.00 0.00 2.24
1619 1764 8.893219 TGGAATATGTGAGATGATGAACTTAC 57.107 34.615 0.00 0.00 0.00 2.34
1620 1765 7.933577 TGGAATATGTGAGATGATGAACTTACC 59.066 37.037 0.00 0.00 0.00 2.85
1621 1766 7.116948 GGAATATGTGAGATGATGAACTTACCG 59.883 40.741 0.00 0.00 0.00 4.02
1622 1767 4.801330 TGTGAGATGATGAACTTACCGT 57.199 40.909 0.00 0.00 0.00 4.83
1623 1768 5.907866 TGTGAGATGATGAACTTACCGTA 57.092 39.130 0.00 0.00 0.00 4.02
1624 1769 6.465439 TGTGAGATGATGAACTTACCGTAT 57.535 37.500 0.00 0.00 0.00 3.06
1625 1770 7.576861 TGTGAGATGATGAACTTACCGTATA 57.423 36.000 0.00 0.00 0.00 1.47
1626 1771 7.649057 TGTGAGATGATGAACTTACCGTATAG 58.351 38.462 0.00 0.00 0.00 1.31
1627 1772 7.284716 TGTGAGATGATGAACTTACCGTATAGT 59.715 37.037 0.00 0.00 0.00 2.12
1628 1773 8.781196 GTGAGATGATGAACTTACCGTATAGTA 58.219 37.037 0.00 0.00 0.00 1.82
1629 1774 9.346005 TGAGATGATGAACTTACCGTATAGTAA 57.654 33.333 0.00 0.00 0.00 2.24
1632 1777 9.962783 GATGATGAACTTACCGTATAGTAAAGT 57.037 33.333 0.00 0.00 32.02 2.66
1636 1781 9.741647 ATGAACTTACCGTATAGTAAAGTTAGC 57.258 33.333 0.00 0.00 32.02 3.09
1637 1782 8.739039 TGAACTTACCGTATAGTAAAGTTAGCA 58.261 33.333 0.00 0.00 32.02 3.49
1638 1783 8.917415 AACTTACCGTATAGTAAAGTTAGCAC 57.083 34.615 0.00 0.00 32.02 4.40
1639 1784 7.484140 ACTTACCGTATAGTAAAGTTAGCACC 58.516 38.462 0.00 0.00 32.02 5.01
1640 1785 5.920193 ACCGTATAGTAAAGTTAGCACCA 57.080 39.130 0.00 0.00 0.00 4.17
1641 1786 6.284891 ACCGTATAGTAAAGTTAGCACCAA 57.715 37.500 0.00 0.00 0.00 3.67
1642 1787 6.881570 ACCGTATAGTAAAGTTAGCACCAAT 58.118 36.000 0.00 0.00 0.00 3.16
1643 1788 8.010733 ACCGTATAGTAAAGTTAGCACCAATA 57.989 34.615 0.00 0.00 0.00 1.90
1644 1789 8.477256 ACCGTATAGTAAAGTTAGCACCAATAA 58.523 33.333 0.00 0.00 0.00 1.40
1645 1790 9.316730 CCGTATAGTAAAGTTAGCACCAATAAA 57.683 33.333 0.00 0.00 0.00 1.40
1662 1807 7.627585 CCAATAAATGGCATGTTTAGATTCG 57.372 36.000 0.00 0.00 43.80 3.34
1663 1808 7.202526 CCAATAAATGGCATGTTTAGATTCGT 58.797 34.615 0.00 0.00 43.80 3.85
1664 1809 8.349245 CCAATAAATGGCATGTTTAGATTCGTA 58.651 33.333 0.00 0.00 43.80 3.43
1665 1810 9.169468 CAATAAATGGCATGTTTAGATTCGTAC 57.831 33.333 0.00 0.00 0.00 3.67
1666 1811 6.751514 AAATGGCATGTTTAGATTCGTACA 57.248 33.333 0.00 0.00 0.00 2.90
1667 1812 5.734855 ATGGCATGTTTAGATTCGTACAC 57.265 39.130 0.00 0.00 0.00 2.90
1668 1813 4.827692 TGGCATGTTTAGATTCGTACACT 58.172 39.130 0.00 0.00 0.00 3.55
1669 1814 5.242434 TGGCATGTTTAGATTCGTACACTT 58.758 37.500 0.00 0.00 0.00 3.16
1670 1815 5.703592 TGGCATGTTTAGATTCGTACACTTT 59.296 36.000 0.00 0.00 0.00 2.66
1671 1816 6.021596 GGCATGTTTAGATTCGTACACTTTG 58.978 40.000 0.00 0.00 0.00 2.77
1672 1817 5.508224 GCATGTTTAGATTCGTACACTTTGC 59.492 40.000 0.00 0.00 0.00 3.68
1673 1818 6.598525 CATGTTTAGATTCGTACACTTTGCA 58.401 36.000 0.00 0.00 0.00 4.08
1674 1819 6.223138 TGTTTAGATTCGTACACTTTGCAG 57.777 37.500 0.00 0.00 0.00 4.41
1675 1820 5.986741 TGTTTAGATTCGTACACTTTGCAGA 59.013 36.000 0.00 0.00 0.00 4.26
1676 1821 6.649141 TGTTTAGATTCGTACACTTTGCAGAT 59.351 34.615 0.00 0.00 0.00 2.90
1677 1822 6.647212 TTAGATTCGTACACTTTGCAGATG 57.353 37.500 0.00 0.00 0.00 2.90
1678 1823 4.569943 AGATTCGTACACTTTGCAGATGT 58.430 39.130 5.12 5.12 0.00 3.06
1679 1824 5.720202 AGATTCGTACACTTTGCAGATGTA 58.280 37.500 3.42 3.42 0.00 2.29
1680 1825 6.341316 AGATTCGTACACTTTGCAGATGTAT 58.659 36.000 9.24 0.00 31.79 2.29
1681 1826 5.778161 TTCGTACACTTTGCAGATGTATG 57.222 39.130 15.18 15.18 37.23 2.39
1682 1827 4.816392 TCGTACACTTTGCAGATGTATGT 58.184 39.130 18.35 8.77 37.20 2.29
1683 1828 4.862574 TCGTACACTTTGCAGATGTATGTC 59.137 41.667 18.35 5.34 37.20 3.06
1684 1829 4.864806 CGTACACTTTGCAGATGTATGTCT 59.135 41.667 13.92 0.00 33.17 3.41
1685 1830 6.033966 CGTACACTTTGCAGATGTATGTCTA 58.966 40.000 13.92 0.00 33.17 2.59
1686 1831 6.197282 CGTACACTTTGCAGATGTATGTCTAG 59.803 42.308 13.92 0.00 33.17 2.43
1687 1832 6.286240 ACACTTTGCAGATGTATGTCTAGA 57.714 37.500 0.00 0.00 0.00 2.43
1688 1833 6.701340 ACACTTTGCAGATGTATGTCTAGAA 58.299 36.000 0.00 0.00 0.00 2.10
1689 1834 7.161404 ACACTTTGCAGATGTATGTCTAGAAA 58.839 34.615 0.00 0.00 0.00 2.52
1690 1835 7.661437 ACACTTTGCAGATGTATGTCTAGAAAA 59.339 33.333 0.00 0.00 0.00 2.29
1691 1836 8.173775 CACTTTGCAGATGTATGTCTAGAAAAG 58.826 37.037 0.00 0.00 33.19 2.27
1692 1837 7.335422 ACTTTGCAGATGTATGTCTAGAAAAGG 59.665 37.037 0.00 0.00 32.29 3.11
1693 1838 6.544928 TGCAGATGTATGTCTAGAAAAGGA 57.455 37.500 0.00 0.00 0.00 3.36
1694 1839 7.129457 TGCAGATGTATGTCTAGAAAAGGAT 57.871 36.000 0.00 0.00 0.00 3.24
1695 1840 8.250143 TGCAGATGTATGTCTAGAAAAGGATA 57.750 34.615 0.00 0.00 0.00 2.59
1696 1841 8.363390 TGCAGATGTATGTCTAGAAAAGGATAG 58.637 37.037 0.00 0.00 0.00 2.08
1697 1842 7.816995 GCAGATGTATGTCTAGAAAAGGATAGG 59.183 40.741 0.00 0.00 0.00 2.57
1698 1843 7.816995 CAGATGTATGTCTAGAAAAGGATAGGC 59.183 40.741 0.00 0.00 0.00 3.93
1699 1844 7.732593 AGATGTATGTCTAGAAAAGGATAGGCT 59.267 37.037 0.00 0.00 0.00 4.58
1700 1845 8.958060 ATGTATGTCTAGAAAAGGATAGGCTA 57.042 34.615 0.00 0.00 0.00 3.93
1701 1846 8.958060 TGTATGTCTAGAAAAGGATAGGCTAT 57.042 34.615 6.76 6.76 0.00 2.97
1705 1850 8.191534 TGTCTAGAAAAGGATAGGCTATAACC 57.808 38.462 7.08 5.57 0.00 2.85
1706 1851 7.039923 TGTCTAGAAAAGGATAGGCTATAACCG 60.040 40.741 7.08 0.00 33.69 4.44
1707 1852 4.895961 AGAAAAGGATAGGCTATAACCGC 58.104 43.478 7.08 0.00 33.69 5.68
1708 1853 4.593634 AGAAAAGGATAGGCTATAACCGCT 59.406 41.667 7.08 0.00 33.69 5.52
1709 1854 5.778750 AGAAAAGGATAGGCTATAACCGCTA 59.221 40.000 7.08 0.00 33.69 4.26
1710 1855 6.269307 AGAAAAGGATAGGCTATAACCGCTAA 59.731 38.462 7.08 0.00 33.69 3.09
1711 1856 5.662674 AAGGATAGGCTATAACCGCTAAG 57.337 43.478 7.08 0.00 33.69 2.18
1713 1858 3.132467 GGATAGGCTATAACCGCTAAGGG 59.868 52.174 7.08 0.00 46.96 3.95
1714 1859 2.098618 AGGCTATAACCGCTAAGGGT 57.901 50.000 0.00 0.00 46.96 4.34
1722 1867 2.351706 ACCGCTAAGGGTTTGTTGAA 57.648 45.000 0.00 0.00 46.96 2.69
1723 1868 2.657143 ACCGCTAAGGGTTTGTTGAAA 58.343 42.857 0.00 0.00 46.96 2.69
1724 1869 3.227614 ACCGCTAAGGGTTTGTTGAAAT 58.772 40.909 0.00 0.00 46.96 2.17
1725 1870 3.254903 ACCGCTAAGGGTTTGTTGAAATC 59.745 43.478 0.00 0.00 46.96 2.17
1726 1871 3.366985 CCGCTAAGGGTTTGTTGAAATCC 60.367 47.826 0.00 0.00 42.13 3.01
1733 1878 4.048504 GGGTTTGTTGAAATCCTTGAACG 58.951 43.478 0.00 0.00 39.07 3.95
1734 1879 3.489416 GGTTTGTTGAAATCCTTGAACGC 59.511 43.478 0.00 0.00 31.90 4.84
1735 1880 3.363341 TTGTTGAAATCCTTGAACGCC 57.637 42.857 0.00 0.00 31.90 5.68
1736 1881 2.302260 TGTTGAAATCCTTGAACGCCA 58.698 42.857 0.00 0.00 31.90 5.69
1737 1882 2.293122 TGTTGAAATCCTTGAACGCCAG 59.707 45.455 0.00 0.00 31.90 4.85
1738 1883 1.533625 TGAAATCCTTGAACGCCAGG 58.466 50.000 0.00 0.00 0.00 4.45
1739 1884 1.073125 TGAAATCCTTGAACGCCAGGA 59.927 47.619 0.00 0.00 34.66 3.86
1740 1885 2.159382 GAAATCCTTGAACGCCAGGAA 58.841 47.619 0.00 0.00 33.78 3.36
1741 1886 2.514458 AATCCTTGAACGCCAGGAAT 57.486 45.000 0.00 0.00 33.78 3.01
1742 1887 2.514458 ATCCTTGAACGCCAGGAATT 57.486 45.000 0.00 0.00 33.78 2.17
1743 1888 1.821216 TCCTTGAACGCCAGGAATTC 58.179 50.000 0.00 0.00 0.00 2.17
1744 1889 0.811281 CCTTGAACGCCAGGAATTCC 59.189 55.000 17.31 17.31 0.00 3.01
1745 1890 0.811281 CTTGAACGCCAGGAATTCCC 59.189 55.000 21.22 5.01 36.42 3.97
1746 1891 0.610785 TTGAACGCCAGGAATTCCCC 60.611 55.000 21.22 8.91 36.42 4.81
1747 1892 1.001393 GAACGCCAGGAATTCCCCA 60.001 57.895 21.22 0.00 36.42 4.96
1748 1893 1.304134 AACGCCAGGAATTCCCCAC 60.304 57.895 21.22 9.32 36.42 4.61
1749 1894 1.789576 AACGCCAGGAATTCCCCACT 61.790 55.000 21.22 0.00 36.42 4.00
1750 1895 1.452108 CGCCAGGAATTCCCCACTC 60.452 63.158 21.22 5.44 36.42 3.51
1751 1896 1.915078 CGCCAGGAATTCCCCACTCT 61.915 60.000 21.22 0.00 36.42 3.24
1752 1897 0.332972 GCCAGGAATTCCCCACTCTT 59.667 55.000 21.22 0.00 36.42 2.85
1753 1898 1.272704 GCCAGGAATTCCCCACTCTTT 60.273 52.381 21.22 0.00 36.42 2.52
1754 1899 2.823152 GCCAGGAATTCCCCACTCTTTT 60.823 50.000 21.22 0.00 36.42 2.27
1755 1900 3.563479 GCCAGGAATTCCCCACTCTTTTA 60.563 47.826 21.22 0.00 36.42 1.52
1756 1901 4.017126 CCAGGAATTCCCCACTCTTTTAC 58.983 47.826 21.22 0.00 36.42 2.01
1757 1902 3.689649 CAGGAATTCCCCACTCTTTTACG 59.310 47.826 21.22 0.00 36.42 3.18
1758 1903 3.329814 AGGAATTCCCCACTCTTTTACGT 59.670 43.478 21.22 0.00 36.42 3.57
1759 1904 4.077108 GGAATTCCCCACTCTTTTACGTT 58.923 43.478 14.03 0.00 0.00 3.99
1760 1905 4.521639 GGAATTCCCCACTCTTTTACGTTT 59.478 41.667 14.03 0.00 0.00 3.60
1761 1906 5.010314 GGAATTCCCCACTCTTTTACGTTTT 59.990 40.000 14.03 0.00 0.00 2.43
1762 1907 6.461927 GGAATTCCCCACTCTTTTACGTTTTT 60.462 38.462 14.03 0.00 0.00 1.94
1763 1908 5.503662 TTCCCCACTCTTTTACGTTTTTC 57.496 39.130 0.00 0.00 0.00 2.29
1764 1909 3.884693 TCCCCACTCTTTTACGTTTTTCC 59.115 43.478 0.00 0.00 0.00 3.13
1765 1910 3.887110 CCCCACTCTTTTACGTTTTTCCT 59.113 43.478 0.00 0.00 0.00 3.36
1766 1911 4.340097 CCCCACTCTTTTACGTTTTTCCTT 59.660 41.667 0.00 0.00 0.00 3.36
1767 1912 5.163488 CCCCACTCTTTTACGTTTTTCCTTT 60.163 40.000 0.00 0.00 0.00 3.11
1768 1913 5.746721 CCCACTCTTTTACGTTTTTCCTTTG 59.253 40.000 0.00 0.00 0.00 2.77
1769 1914 6.404954 CCCACTCTTTTACGTTTTTCCTTTGA 60.405 38.462 0.00 0.00 0.00 2.69
1770 1915 7.200455 CCACTCTTTTACGTTTTTCCTTTGAT 58.800 34.615 0.00 0.00 0.00 2.57
1771 1916 7.378728 CCACTCTTTTACGTTTTTCCTTTGATC 59.621 37.037 0.00 0.00 0.00 2.92
1772 1917 7.378728 CACTCTTTTACGTTTTTCCTTTGATCC 59.621 37.037 0.00 0.00 0.00 3.36
1773 1918 7.284716 ACTCTTTTACGTTTTTCCTTTGATCCT 59.715 33.333 0.00 0.00 0.00 3.24
1774 1919 8.002984 TCTTTTACGTTTTTCCTTTGATCCTT 57.997 30.769 0.00 0.00 0.00 3.36
1775 1920 8.471609 TCTTTTACGTTTTTCCTTTGATCCTTT 58.528 29.630 0.00 0.00 0.00 3.11
1776 1921 7.995463 TTTACGTTTTTCCTTTGATCCTTTG 57.005 32.000 0.00 0.00 0.00 2.77
1777 1922 5.845391 ACGTTTTTCCTTTGATCCTTTGA 57.155 34.783 0.00 0.00 0.00 2.69
1778 1923 6.405278 ACGTTTTTCCTTTGATCCTTTGAT 57.595 33.333 0.00 0.00 0.00 2.57
1779 1924 7.519032 ACGTTTTTCCTTTGATCCTTTGATA 57.481 32.000 0.00 0.00 0.00 2.15
1780 1925 7.593825 ACGTTTTTCCTTTGATCCTTTGATAG 58.406 34.615 0.00 0.00 0.00 2.08
1781 1926 7.029563 CGTTTTTCCTTTGATCCTTTGATAGG 58.970 38.462 0.00 0.00 46.27 2.57
1782 1927 6.530019 TTTTCCTTTGATCCTTTGATAGGC 57.470 37.500 0.00 0.00 44.37 3.93
1783 1928 4.860802 TCCTTTGATCCTTTGATAGGCA 57.139 40.909 0.00 0.00 44.37 4.75
1784 1929 4.785301 TCCTTTGATCCTTTGATAGGCAG 58.215 43.478 0.00 0.00 44.37 4.85
1785 1930 4.474651 TCCTTTGATCCTTTGATAGGCAGA 59.525 41.667 0.00 0.00 44.37 4.26
1786 1931 4.820716 CCTTTGATCCTTTGATAGGCAGAG 59.179 45.833 0.00 0.00 44.37 3.35
1787 1932 5.397221 CCTTTGATCCTTTGATAGGCAGAGA 60.397 44.000 0.00 0.00 44.37 3.10
1788 1933 4.679373 TGATCCTTTGATAGGCAGAGAC 57.321 45.455 0.00 0.00 44.37 3.36
1789 1934 3.068732 TGATCCTTTGATAGGCAGAGACG 59.931 47.826 0.00 0.00 44.37 4.18
1790 1935 1.757118 TCCTTTGATAGGCAGAGACGG 59.243 52.381 0.00 0.00 44.37 4.79
1791 1936 1.757118 CCTTTGATAGGCAGAGACGGA 59.243 52.381 0.00 0.00 37.17 4.69
1792 1937 2.168521 CCTTTGATAGGCAGAGACGGAA 59.831 50.000 0.00 0.00 37.17 4.30
1793 1938 3.181461 CCTTTGATAGGCAGAGACGGAAT 60.181 47.826 0.00 0.00 37.17 3.01
1794 1939 3.459232 TTGATAGGCAGAGACGGAATG 57.541 47.619 0.00 0.00 0.00 2.67
1795 1940 1.688735 TGATAGGCAGAGACGGAATGG 59.311 52.381 0.00 0.00 0.00 3.16
1796 1941 0.394565 ATAGGCAGAGACGGAATGGC 59.605 55.000 0.00 0.00 39.62 4.40
1797 1942 0.975556 TAGGCAGAGACGGAATGGCA 60.976 55.000 0.00 0.00 41.62 4.92
1798 1943 2.109126 GGCAGAGACGGAATGGCAC 61.109 63.158 0.00 0.00 39.18 5.01
1811 1956 2.499214 TGGCACAAACCCACTTCAC 58.501 52.632 0.00 0.00 31.92 3.18
1812 1957 0.323816 TGGCACAAACCCACTTCACA 60.324 50.000 0.00 0.00 31.92 3.58
1813 1958 0.102300 GGCACAAACCCACTTCACAC 59.898 55.000 0.00 0.00 0.00 3.82
1814 1959 0.102300 GCACAAACCCACTTCACACC 59.898 55.000 0.00 0.00 0.00 4.16
1815 1960 1.762708 CACAAACCCACTTCACACCT 58.237 50.000 0.00 0.00 0.00 4.00
1816 1961 2.099405 CACAAACCCACTTCACACCTT 58.901 47.619 0.00 0.00 0.00 3.50
1817 1962 2.495669 CACAAACCCACTTCACACCTTT 59.504 45.455 0.00 0.00 0.00 3.11
1818 1963 3.056179 CACAAACCCACTTCACACCTTTT 60.056 43.478 0.00 0.00 0.00 2.27
1819 1964 3.056179 ACAAACCCACTTCACACCTTTTG 60.056 43.478 0.00 0.00 0.00 2.44
1820 1965 1.111277 ACCCACTTCACACCTTTTGC 58.889 50.000 0.00 0.00 0.00 3.68
1821 1966 0.389025 CCCACTTCACACCTTTTGCC 59.611 55.000 0.00 0.00 0.00 4.52
1822 1967 0.030638 CCACTTCACACCTTTTGCCG 59.969 55.000 0.00 0.00 0.00 5.69
1823 1968 1.021202 CACTTCACACCTTTTGCCGA 58.979 50.000 0.00 0.00 0.00 5.54
1843 1988 0.679960 GTGGCGGGGATTTAGCAGTT 60.680 55.000 0.00 0.00 0.00 3.16
1844 1989 0.679640 TGGCGGGGATTTAGCAGTTG 60.680 55.000 0.00 0.00 0.00 3.16
1852 1997 4.342092 GGGGATTTAGCAGTTGCATTATGT 59.658 41.667 6.90 0.00 45.16 2.29
1859 2004 7.539712 TTAGCAGTTGCATTATGTCTAGTTC 57.460 36.000 6.90 0.00 45.16 3.01
1864 2009 3.808728 TGCATTATGTCTAGTTCCCTGC 58.191 45.455 0.00 0.00 0.00 4.85
1867 2012 3.543680 TTATGTCTAGTTCCCTGCTGC 57.456 47.619 0.00 0.00 0.00 5.25
1887 2032 6.043127 TGCTGCTGGGATAGTATTTCTTGATA 59.957 38.462 0.00 0.00 0.00 2.15
1893 2038 7.977818 TGGGATAGTATTTCTTGATACATGCT 58.022 34.615 0.00 0.00 35.43 3.79
1894 2039 9.100197 TGGGATAGTATTTCTTGATACATGCTA 57.900 33.333 0.00 0.00 35.43 3.49
1903 2048 6.360370 TCTTGATACATGCTATAAGGTCCC 57.640 41.667 0.00 0.00 0.00 4.46
1904 2049 5.843969 TCTTGATACATGCTATAAGGTCCCA 59.156 40.000 0.00 0.00 0.00 4.37
1905 2050 6.328934 TCTTGATACATGCTATAAGGTCCCAA 59.671 38.462 0.00 0.00 0.00 4.12
1906 2051 6.508030 TGATACATGCTATAAGGTCCCAAA 57.492 37.500 0.00 0.00 0.00 3.28
1907 2052 6.905736 TGATACATGCTATAAGGTCCCAAAA 58.094 36.000 0.00 0.00 0.00 2.44
1908 2053 7.526041 TGATACATGCTATAAGGTCCCAAAAT 58.474 34.615 0.00 0.00 0.00 1.82
1909 2054 8.664992 TGATACATGCTATAAGGTCCCAAAATA 58.335 33.333 0.00 0.00 0.00 1.40
1910 2055 9.686683 GATACATGCTATAAGGTCCCAAAATAT 57.313 33.333 0.00 0.00 0.00 1.28
1911 2056 7.765695 ACATGCTATAAGGTCCCAAAATATG 57.234 36.000 0.00 0.00 0.00 1.78
1912 2057 7.297614 ACATGCTATAAGGTCCCAAAATATGT 58.702 34.615 0.00 0.00 0.00 2.29
1913 2058 8.444783 ACATGCTATAAGGTCCCAAAATATGTA 58.555 33.333 0.00 0.00 0.00 2.29
1914 2059 8.730680 CATGCTATAAGGTCCCAAAATATGTAC 58.269 37.037 0.00 0.00 0.00 2.90
1915 2060 7.807198 TGCTATAAGGTCCCAAAATATGTACA 58.193 34.615 0.00 0.00 0.00 2.90
1916 2061 8.275758 TGCTATAAGGTCCCAAAATATGTACAA 58.724 33.333 0.00 0.00 0.00 2.41
1917 2062 9.297037 GCTATAAGGTCCCAAAATATGTACAAT 57.703 33.333 0.00 0.00 0.00 2.71
1944 2089 7.403312 AAAATGGTATCGGATTCATGAAACA 57.597 32.000 13.09 0.00 0.00 2.83
1949 2094 6.038161 TGGTATCGGATTCATGAAACATGAAC 59.962 38.462 23.22 17.57 40.37 3.18
1955 2100 6.914215 CGGATTCATGAAACATGAACTTATGG 59.086 38.462 23.22 10.39 40.37 2.74
1956 2101 7.201723 CGGATTCATGAAACATGAACTTATGGA 60.202 37.037 23.22 5.46 40.37 3.41
1957 2102 7.917505 GGATTCATGAAACATGAACTTATGGAC 59.082 37.037 23.22 10.98 40.37 4.02
1958 2103 7.757941 TTCATGAAACATGAACTTATGGACA 57.242 32.000 18.95 0.00 33.55 4.02
1959 2104 7.943079 TCATGAAACATGAACTTATGGACAT 57.057 32.000 11.27 0.00 32.32 3.06
1960 2105 7.764331 TCATGAAACATGAACTTATGGACATG 58.236 34.615 11.27 0.00 43.56 3.21
1961 2106 6.513806 TGAAACATGAACTTATGGACATGG 57.486 37.500 0.00 0.00 42.66 3.66
1962 2107 4.989279 AACATGAACTTATGGACATGGC 57.011 40.909 0.00 0.00 42.66 4.40
1963 2108 3.966979 ACATGAACTTATGGACATGGCA 58.033 40.909 0.00 0.00 42.66 4.92
1964 2109 4.539726 ACATGAACTTATGGACATGGCAT 58.460 39.130 0.00 0.00 42.66 4.40
1965 2110 4.340097 ACATGAACTTATGGACATGGCATG 59.660 41.667 25.31 25.31 42.66 4.06
1967 2112 4.343231 TGAACTTATGGACATGGCATGTT 58.657 39.130 31.83 19.73 45.03 2.71
1968 2113 4.158209 TGAACTTATGGACATGGCATGTTG 59.842 41.667 31.83 19.21 45.03 3.33
1969 2114 3.700538 ACTTATGGACATGGCATGTTGT 58.299 40.909 31.83 22.03 45.03 3.32
1970 2115 4.854173 ACTTATGGACATGGCATGTTGTA 58.146 39.130 31.83 21.13 45.03 2.41
1971 2116 5.260424 ACTTATGGACATGGCATGTTGTAA 58.740 37.500 31.83 25.33 45.03 2.41
1972 2117 5.125417 ACTTATGGACATGGCATGTTGTAAC 59.875 40.000 31.83 19.12 45.03 2.50
1973 2118 3.153369 TGGACATGGCATGTTGTAACT 57.847 42.857 31.83 9.39 45.03 2.24
1974 2119 3.495331 TGGACATGGCATGTTGTAACTT 58.505 40.909 31.83 8.61 45.03 2.66
1999 2144 6.401047 TTTCCCATAGTAACTCATACTCCG 57.599 41.667 0.00 0.00 43.87 4.63
2000 2145 4.404640 TCCCATAGTAACTCATACTCCGG 58.595 47.826 0.00 0.00 43.87 5.14
2001 2146 4.141088 TCCCATAGTAACTCATACTCCGGT 60.141 45.833 0.00 0.00 43.87 5.28
2002 2147 4.587684 CCCATAGTAACTCATACTCCGGTT 59.412 45.833 0.00 0.00 43.87 4.44
2003 2148 5.771666 CCCATAGTAACTCATACTCCGGTTA 59.228 44.000 0.00 0.00 43.87 2.85
2004 2149 6.294397 CCCATAGTAACTCATACTCCGGTTAC 60.294 46.154 0.00 0.00 43.87 2.50
2009 2154 7.285566 AGTAACTCATACTCCGGTTACTATGA 58.714 38.462 13.38 7.09 46.72 2.15
2011 2156 5.692928 ACTCATACTCCGGTTACTATGAGT 58.307 41.667 24.58 24.58 45.14 3.41
2022 2167 5.587043 CGGTTACTATGAGTTTTGGGCATTA 59.413 40.000 0.00 0.00 0.00 1.90
2049 2202 1.341531 CCATGCCTCCGGTTACTCTAG 59.658 57.143 0.00 0.00 0.00 2.43
2050 2203 2.032620 CATGCCTCCGGTTACTCTAGT 58.967 52.381 0.00 0.00 0.00 2.57
2056 2209 4.458397 CCTCCGGTTACTCTAGTGTCATA 58.542 47.826 0.00 0.00 0.00 2.15
2057 2210 5.071370 CCTCCGGTTACTCTAGTGTCATAT 58.929 45.833 0.00 0.00 0.00 1.78
2058 2211 5.535406 CCTCCGGTTACTCTAGTGTCATATT 59.465 44.000 0.00 0.00 0.00 1.28
2061 2214 6.832384 TCCGGTTACTCTAGTGTCATATTTCT 59.168 38.462 0.00 0.00 0.00 2.52
2062 2215 7.341256 TCCGGTTACTCTAGTGTCATATTTCTT 59.659 37.037 0.00 0.00 0.00 2.52
2063 2216 8.627403 CCGGTTACTCTAGTGTCATATTTCTTA 58.373 37.037 0.00 0.00 0.00 2.10
2071 2224 9.982651 TCTAGTGTCATATTTCTTAACCATAGC 57.017 33.333 0.00 0.00 0.00 2.97
2072 2225 9.988815 CTAGTGTCATATTTCTTAACCATAGCT 57.011 33.333 0.00 0.00 0.00 3.32
2073 2226 8.668510 AGTGTCATATTTCTTAACCATAGCTG 57.331 34.615 0.00 0.00 0.00 4.24
2076 2229 9.679661 TGTCATATTTCTTAACCATAGCTGAAA 57.320 29.630 0.00 0.00 0.00 2.69
2084 2237 7.175104 TCTTAACCATAGCTGAAATTTCCTGT 58.825 34.615 15.48 2.20 0.00 4.00
2092 2245 8.680903 CATAGCTGAAATTTCCTGTTACATTCT 58.319 33.333 15.48 2.78 0.00 2.40
2093 2246 7.530426 AGCTGAAATTTCCTGTTACATTCTT 57.470 32.000 15.48 0.00 0.00 2.52
2094 2247 7.955918 AGCTGAAATTTCCTGTTACATTCTTT 58.044 30.769 15.48 0.00 0.00 2.52
2095 2248 8.084684 AGCTGAAATTTCCTGTTACATTCTTTC 58.915 33.333 15.48 0.00 0.00 2.62
2098 2251 7.867403 TGAAATTTCCTGTTACATTCTTTCTGC 59.133 33.333 15.48 0.00 0.00 4.26
2177 2330 7.547227 AGAATAATGAATTGTGTAAACAGGGC 58.453 34.615 0.00 0.00 0.00 5.19
2217 2370 4.092821 TGAACATGCGCTGTAGATTTGTAC 59.907 41.667 9.73 0.00 36.98 2.90
2227 2380 6.080406 GCTGTAGATTTGTACACTTTGCTTC 58.920 40.000 0.00 0.00 0.00 3.86
2243 2396 5.973651 TTGCTTCGAATATGTGAGATGAC 57.026 39.130 0.00 0.00 0.00 3.06
2244 2397 5.009854 TGCTTCGAATATGTGAGATGACA 57.990 39.130 0.00 0.00 0.00 3.58
2247 2400 6.036408 TGCTTCGAATATGTGAGATGACAAAG 59.964 38.462 0.00 0.00 0.00 2.77
2252 2405 7.491372 TCGAATATGTGAGATGACAAAGTTACC 59.509 37.037 0.00 0.00 0.00 2.85
2291 2444 8.978874 AGCACCAATAAATGATATGTGTAGAA 57.021 30.769 0.00 0.00 0.00 2.10
2307 2460 7.561021 TGTGTAGAATTGTAAACTTTGCAGA 57.439 32.000 4.69 0.00 0.00 4.26
2308 2461 8.165239 TGTGTAGAATTGTAAACTTTGCAGAT 57.835 30.769 4.69 0.00 0.00 2.90
2378 2626 6.316140 TGGAACATGTTATGCTGATACAGTTC 59.684 38.462 11.95 0.00 33.43 3.01
2383 2631 1.656652 ATGCTGATACAGTTCCGCAC 58.343 50.000 0.00 0.00 38.42 5.34
2385 2633 0.736325 GCTGATACAGTTCCGCACGT 60.736 55.000 0.00 0.00 33.43 4.49
2487 2735 2.383527 CGCTCCGCTGGTGTTCTTC 61.384 63.158 0.00 0.00 0.00 2.87
2648 2914 2.172505 AGTGAAATGTGTCCTGGTGTGA 59.827 45.455 0.00 0.00 0.00 3.58
2654 2921 3.080300 TGTGTCCTGGTGTGAGTTTTT 57.920 42.857 0.00 0.00 0.00 1.94
2815 3088 0.036164 TGTGTTCTTGGGGTCGATGG 59.964 55.000 0.00 0.00 0.00 3.51
2894 3167 2.111878 GGTCAGGGCCCATCATCG 59.888 66.667 27.56 4.67 0.00 3.84
2897 3170 2.194056 CAGGGCCCATCATCGCTT 59.806 61.111 27.56 0.00 0.00 4.68
2902 3175 0.947244 GGCCCATCATCGCTTGTTAG 59.053 55.000 0.00 0.00 0.00 2.34
2912 3185 5.938322 TCATCGCTTGTTAGTCCAATTTTC 58.062 37.500 0.00 0.00 0.00 2.29
3081 3537 8.437360 TCATCTATACAACATTTTTCGCTCAT 57.563 30.769 0.00 0.00 0.00 2.90
3087 3543 4.739716 ACAACATTTTTCGCTCATGAACAC 59.260 37.500 0.00 0.00 0.00 3.32
3090 3546 5.215160 ACATTTTTCGCTCATGAACACTTC 58.785 37.500 0.00 0.00 0.00 3.01
3098 3554 7.202016 TCGCTCATGAACACTTCTTAAAAAT 57.798 32.000 0.00 0.00 0.00 1.82
3101 3557 8.015087 CGCTCATGAACACTTCTTAAAAATACA 58.985 33.333 0.00 0.00 0.00 2.29
3208 3665 8.272866 GCGCAAACATTTTTCAGTATTTAAACT 58.727 29.630 0.30 0.00 0.00 2.66
3370 3827 1.746615 CCAGAATCCAGCCCACGTG 60.747 63.158 9.08 9.08 0.00 4.49
3446 3927 8.474577 CGAATGTGACAAATTTTCTCTCAAAAG 58.525 33.333 0.00 0.00 0.00 2.27
3476 3969 1.343465 AGCTCCCGTCGAAAAGAAGAA 59.657 47.619 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 45 7.201384 GCTTAATAAGTTTCATCTTGCAGCAAC 60.201 37.037 2.83 0.00 0.00 4.17
70 72 1.583054 CATTAGTGGCTAGGCGGAAC 58.417 55.000 12.19 4.45 0.00 3.62
75 77 2.710096 TGTTCCATTAGTGGCTAGGC 57.290 50.000 9.85 9.85 45.63 3.93
96 101 4.066646 TGTGGTTGAAGATTCAGTTCGA 57.933 40.909 0.00 0.00 38.61 3.71
113 118 0.819582 GGAAGGTGCAATGGATGTGG 59.180 55.000 0.00 0.00 0.00 4.17
135 140 0.976641 AGACGAGGGCATTGTTCTCA 59.023 50.000 0.00 0.00 0.00 3.27
151 156 7.226720 TCAACTTTCTGAGATGGTAAAACAGAC 59.773 37.037 0.00 0.00 37.34 3.51
164 169 7.545965 GGAAAATAGATCGTCAACTTTCTGAGA 59.454 37.037 0.00 0.00 0.00 3.27
242 247 7.452880 TTTTTGTAGAGATGGGATGTTTCTG 57.547 36.000 0.00 0.00 0.00 3.02
287 292 3.006112 TCAGAGTCCGTGCTATCTTCT 57.994 47.619 0.00 0.00 0.00 2.85
288 293 4.314740 AATCAGAGTCCGTGCTATCTTC 57.685 45.455 0.00 0.00 0.00 2.87
291 296 3.923461 GCATAATCAGAGTCCGTGCTATC 59.077 47.826 0.00 0.00 0.00 2.08
292 297 3.321968 TGCATAATCAGAGTCCGTGCTAT 59.678 43.478 0.00 0.00 32.67 2.97
293 298 2.693074 TGCATAATCAGAGTCCGTGCTA 59.307 45.455 0.00 0.00 32.67 3.49
300 316 5.537188 CTTAGGGTCTGCATAATCAGAGTC 58.463 45.833 0.00 0.00 43.10 3.36
335 351 9.979578 GGTTGCATATCATTCATTGGTTTATAA 57.020 29.630 0.00 0.00 0.00 0.98
336 352 9.140874 TGGTTGCATATCATTCATTGGTTTATA 57.859 29.630 0.00 0.00 0.00 0.98
404 432 3.118223 CCCTGTTCCTCTTCCCTGTAATC 60.118 52.174 0.00 0.00 0.00 1.75
419 447 1.943507 GCTTCTGTGAGCTCCCTGTTC 60.944 57.143 12.15 0.00 39.57 3.18
522 550 1.195115 CGATGGAGAAGGGGAAGTCA 58.805 55.000 0.00 0.00 0.00 3.41
755 805 2.764128 TCGGTCTCATCCCTGGCC 60.764 66.667 0.00 0.00 0.00 5.36
756 806 1.758514 TCTCGGTCTCATCCCTGGC 60.759 63.158 0.00 0.00 0.00 4.85
757 807 1.395826 GGTCTCGGTCTCATCCCTGG 61.396 65.000 0.00 0.00 0.00 4.45
758 808 0.684479 TGGTCTCGGTCTCATCCCTG 60.684 60.000 0.00 0.00 0.00 4.45
759 809 0.396417 CTGGTCTCGGTCTCATCCCT 60.396 60.000 0.00 0.00 0.00 4.20
760 810 0.395862 TCTGGTCTCGGTCTCATCCC 60.396 60.000 0.00 0.00 0.00 3.85
761 811 1.475403 TTCTGGTCTCGGTCTCATCC 58.525 55.000 0.00 0.00 0.00 3.51
907 959 1.451028 GGGCAGAGCTGGATGTCAC 60.451 63.158 0.00 0.00 0.00 3.67
908 960 2.993008 GGGCAGAGCTGGATGTCA 59.007 61.111 0.00 0.00 0.00 3.58
909 961 2.202987 CGGGCAGAGCTGGATGTC 60.203 66.667 0.00 0.00 0.00 3.06
910 962 2.685017 TCGGGCAGAGCTGGATGT 60.685 61.111 0.00 0.00 0.00 3.06
911 963 1.756408 ATCTCGGGCAGAGCTGGATG 61.756 60.000 9.97 0.00 46.44 3.51
912 964 1.459158 ATCTCGGGCAGAGCTGGAT 60.459 57.895 9.97 0.00 46.44 3.41
913 965 2.042537 ATCTCGGGCAGAGCTGGA 60.043 61.111 9.97 0.00 46.44 3.86
915 967 2.420890 GGATCTCGGGCAGAGCTG 59.579 66.667 9.97 0.00 46.44 4.24
916 968 3.222855 CGGATCTCGGGCAGAGCT 61.223 66.667 9.97 0.00 46.44 4.09
917 969 3.219928 TCGGATCTCGGGCAGAGC 61.220 66.667 9.97 0.00 46.44 4.09
919 971 3.209812 CGTCGGATCTCGGGCAGA 61.210 66.667 0.00 0.00 39.77 4.26
920 972 4.933064 GCGTCGGATCTCGGGCAG 62.933 72.222 0.00 0.00 38.14 4.85
923 975 4.271816 CTGGCGTCGGATCTCGGG 62.272 72.222 0.00 0.00 39.77 5.14
926 978 1.586564 CGAACTGGCGTCGGATCTC 60.587 63.158 0.98 0.00 0.00 2.75
927 979 2.341101 ACGAACTGGCGTCGGATCT 61.341 57.895 0.98 0.00 41.22 2.75
928 980 2.181021 ACGAACTGGCGTCGGATC 59.819 61.111 0.98 0.00 41.22 3.36
939 991 0.247736 GATCAGCCTGTGGACGAACT 59.752 55.000 0.00 0.00 0.00 3.01
946 998 2.124983 CGGTGGATCAGCCTGTGG 60.125 66.667 0.00 0.00 37.63 4.17
988 1040 1.212751 GGTCCATTGCTCGTTTGCC 59.787 57.895 0.00 0.00 0.00 4.52
993 1045 1.215647 GACTCGGTCCATTGCTCGT 59.784 57.895 0.00 0.00 0.00 4.18
1074 1126 2.672996 CAAGGTTGGACGCAGGGG 60.673 66.667 0.00 0.00 0.00 4.79
1115 1167 0.381089 AGCACTACTACATCGACCGC 59.619 55.000 0.00 0.00 0.00 5.68
1129 1181 2.043227 GCCCAGACCTAGATAAGCACT 58.957 52.381 0.00 0.00 0.00 4.40
1131 1183 2.478872 AGCCCAGACCTAGATAAGCA 57.521 50.000 0.00 0.00 0.00 3.91
1132 1184 2.288518 CGAAGCCCAGACCTAGATAAGC 60.289 54.545 0.00 0.00 0.00 3.09
1133 1185 3.651803 CGAAGCCCAGACCTAGATAAG 57.348 52.381 0.00 0.00 0.00 1.73
1165 1217 2.734606 CGAGCATTTCAACGAACACCTA 59.265 45.455 0.00 0.00 0.00 3.08
1210 1262 6.406849 CCCCTCAATCAAACAGAAAAACAGAA 60.407 38.462 0.00 0.00 0.00 3.02
1220 1272 2.089980 CTCTGCCCCTCAATCAAACAG 58.910 52.381 0.00 0.00 0.00 3.16
1221 1273 1.704628 TCTCTGCCCCTCAATCAAACA 59.295 47.619 0.00 0.00 0.00 2.83
1222 1274 2.087646 GTCTCTGCCCCTCAATCAAAC 58.912 52.381 0.00 0.00 0.00 2.93
1223 1275 1.339055 CGTCTCTGCCCCTCAATCAAA 60.339 52.381 0.00 0.00 0.00 2.69
1224 1276 0.250234 CGTCTCTGCCCCTCAATCAA 59.750 55.000 0.00 0.00 0.00 2.57
1225 1277 0.904865 ACGTCTCTGCCCCTCAATCA 60.905 55.000 0.00 0.00 0.00 2.57
1226 1278 0.179097 GACGTCTCTGCCCCTCAATC 60.179 60.000 8.70 0.00 0.00 2.67
1227 1279 0.904865 TGACGTCTCTGCCCCTCAAT 60.905 55.000 17.92 0.00 0.00 2.57
1238 1290 1.067565 TCTGTGCCATTCTGACGTCTC 60.068 52.381 17.92 0.00 0.00 3.36
1257 1309 1.732259 CAACAGGCAACGACATAGGTC 59.268 52.381 0.00 0.00 46.39 3.85
1262 1314 2.945008 CCATATCAACAGGCAACGACAT 59.055 45.455 0.00 0.00 46.39 3.06
1264 1316 2.356135 ACCATATCAACAGGCAACGAC 58.644 47.619 0.00 0.00 46.39 4.34
1270 1349 6.942532 TCAAGAAATACCATATCAACAGGC 57.057 37.500 0.00 0.00 0.00 4.85
1278 1393 9.404848 CATAGCATGGATCAAGAAATACCATAT 57.595 33.333 0.00 0.00 38.99 1.78
1283 1398 6.128063 GCCTCATAGCATGGATCAAGAAATAC 60.128 42.308 0.00 0.00 0.00 1.89
1295 1410 1.679680 CTTTGTGGCCTCATAGCATGG 59.320 52.381 8.61 0.00 0.00 3.66
1296 1411 2.372264 ACTTTGTGGCCTCATAGCATG 58.628 47.619 20.83 6.81 0.00 4.06
1297 1412 2.814805 ACTTTGTGGCCTCATAGCAT 57.185 45.000 20.83 4.36 0.00 3.79
1298 1413 2.571653 AGTACTTTGTGGCCTCATAGCA 59.428 45.455 20.83 9.15 0.00 3.49
1299 1414 2.939103 CAGTACTTTGTGGCCTCATAGC 59.061 50.000 20.83 9.17 0.00 2.97
1301 1416 5.748670 TTACAGTACTTTGTGGCCTCATA 57.251 39.130 8.61 2.85 32.56 2.15
1302 1417 4.634012 TTACAGTACTTTGTGGCCTCAT 57.366 40.909 8.61 0.00 32.56 2.90
1303 1418 4.425180 TTTACAGTACTTTGTGGCCTCA 57.575 40.909 3.32 2.96 32.56 3.86
1304 1419 5.472137 TGATTTTACAGTACTTTGTGGCCTC 59.528 40.000 3.32 0.00 32.56 4.70
1305 1420 5.381757 TGATTTTACAGTACTTTGTGGCCT 58.618 37.500 3.32 0.00 32.56 5.19
1306 1421 5.472137 TCTGATTTTACAGTACTTTGTGGCC 59.528 40.000 0.00 0.00 38.79 5.36
1307 1422 6.554334 TCTGATTTTACAGTACTTTGTGGC 57.446 37.500 0.00 0.00 38.79 5.01
1308 1423 9.398170 CATTTCTGATTTTACAGTACTTTGTGG 57.602 33.333 0.00 0.00 38.79 4.17
1309 1424 9.398170 CCATTTCTGATTTTACAGTACTTTGTG 57.602 33.333 0.00 0.00 38.79 3.33
1310 1425 9.131791 ACCATTTCTGATTTTACAGTACTTTGT 57.868 29.630 0.00 0.00 38.79 2.83
1311 1426 9.398170 CACCATTTCTGATTTTACAGTACTTTG 57.602 33.333 0.00 0.00 38.79 2.77
1312 1427 9.131791 ACACCATTTCTGATTTTACAGTACTTT 57.868 29.630 0.00 0.00 38.79 2.66
1313 1428 8.691661 ACACCATTTCTGATTTTACAGTACTT 57.308 30.769 0.00 0.00 38.79 2.24
1314 1429 7.936847 TGACACCATTTCTGATTTTACAGTACT 59.063 33.333 0.00 0.00 38.79 2.73
1315 1430 8.015658 GTGACACCATTTCTGATTTTACAGTAC 58.984 37.037 0.00 0.00 38.79 2.73
1337 1452 2.096218 GCTCAGGTTTCGTGAATGTGAC 60.096 50.000 0.00 0.00 0.00 3.67
1341 1456 4.201851 CCATAAGCTCAGGTTTCGTGAATG 60.202 45.833 0.00 0.00 0.00 2.67
1354 1469 5.072193 ACATCATACCATGTCCATAAGCTCA 59.928 40.000 0.00 0.00 30.76 4.26
1355 1470 5.555017 ACATCATACCATGTCCATAAGCTC 58.445 41.667 0.00 0.00 30.76 4.09
1357 1472 6.936900 AGTTACATCATACCATGTCCATAAGC 59.063 38.462 0.00 0.00 38.07 3.09
1373 1488 5.789574 ACTATGGGGGAAAAGTTACATCA 57.210 39.130 0.00 0.00 0.00 3.07
1389 1504 9.201127 CACATTCACATCTATGAGTTACTATGG 57.799 37.037 0.00 0.00 0.00 2.74
1394 1509 9.926751 CAAATCACATTCACATCTATGAGTTAC 57.073 33.333 0.00 0.00 0.00 2.50
1395 1510 9.112725 CCAAATCACATTCACATCTATGAGTTA 57.887 33.333 0.00 0.00 0.00 2.24
1396 1511 7.067859 CCCAAATCACATTCACATCTATGAGTT 59.932 37.037 0.00 0.00 0.00 3.01
1402 1517 4.598022 TGCCCAAATCACATTCACATCTA 58.402 39.130 0.00 0.00 0.00 1.98
1405 1520 4.829872 AATGCCCAAATCACATTCACAT 57.170 36.364 0.00 0.00 27.91 3.21
1406 1521 5.722263 CTTAATGCCCAAATCACATTCACA 58.278 37.500 0.00 0.00 35.68 3.58
1407 1522 4.567959 GCTTAATGCCCAAATCACATTCAC 59.432 41.667 0.00 0.00 35.68 3.18
1408 1523 4.222366 TGCTTAATGCCCAAATCACATTCA 59.778 37.500 0.00 0.00 42.00 2.57
1409 1524 4.567959 GTGCTTAATGCCCAAATCACATTC 59.432 41.667 0.00 0.00 42.00 2.67
1410 1525 4.020396 TGTGCTTAATGCCCAAATCACATT 60.020 37.500 0.00 0.00 42.00 2.71
1421 1536 1.025041 GGCCTAGTGTGCTTAATGCC 58.975 55.000 0.00 0.00 42.00 4.40
1426 1541 2.257207 ACTGAAGGCCTAGTGTGCTTA 58.743 47.619 5.16 0.00 0.00 3.09
1428 1543 1.059913 AACTGAAGGCCTAGTGTGCT 58.940 50.000 5.16 0.00 0.00 4.40
1429 1544 1.160137 CAACTGAAGGCCTAGTGTGC 58.840 55.000 5.16 0.00 0.00 4.57
1435 1550 2.821437 AGTAGAGCAACTGAAGGCCTA 58.179 47.619 5.16 0.00 0.00 3.93
1444 1559 3.580458 AGGAACATGACAGTAGAGCAACT 59.420 43.478 0.00 0.00 0.00 3.16
1445 1560 3.929610 GAGGAACATGACAGTAGAGCAAC 59.070 47.826 0.00 0.00 0.00 4.17
1448 1563 3.876274 TGAGGAACATGACAGTAGAGC 57.124 47.619 0.00 0.00 0.00 4.09
1461 1576 2.586648 AAGGGTGATGGTTGAGGAAC 57.413 50.000 0.00 0.00 0.00 3.62
1463 1578 3.611025 AAAAAGGGTGATGGTTGAGGA 57.389 42.857 0.00 0.00 0.00 3.71
1485 1601 4.578871 CACATCTCACAGGATTGTACCAA 58.421 43.478 0.00 0.00 35.25 3.67
1487 1603 2.939103 GCACATCTCACAGGATTGTACC 59.061 50.000 0.00 0.00 35.25 3.34
1489 1605 3.865446 CTGCACATCTCACAGGATTGTA 58.135 45.455 0.00 0.00 35.25 2.41
1490 1606 2.708051 CTGCACATCTCACAGGATTGT 58.292 47.619 0.00 0.00 38.31 2.71
1500 1616 4.277515 TCTAATATGGCCTGCACATCTC 57.722 45.455 3.32 0.00 0.00 2.75
1519 1635 9.897744 CACACTGTTTACACAATTCATTATTCT 57.102 29.630 0.00 0.00 30.36 2.40
1521 1637 8.140628 TGCACACTGTTTACACAATTCATTATT 58.859 29.630 0.00 0.00 30.36 1.40
1522 1638 7.656412 TGCACACTGTTTACACAATTCATTAT 58.344 30.769 0.00 0.00 30.36 1.28
1525 1670 5.067674 ACTGCACACTGTTTACACAATTCAT 59.932 36.000 0.00 0.00 30.36 2.57
1537 1682 2.423538 GGACTTTCAACTGCACACTGTT 59.576 45.455 0.00 0.00 38.36 3.16
1559 1704 1.843368 ATCCACAGCCCATGTTCAAG 58.157 50.000 0.00 0.00 41.41 3.02
1560 1705 2.299582 CAAATCCACAGCCCATGTTCAA 59.700 45.455 0.00 0.00 41.41 2.69
1563 1708 2.014010 ACAAATCCACAGCCCATGTT 57.986 45.000 0.00 0.00 41.41 2.71
1567 1712 1.985159 AGTCTACAAATCCACAGCCCA 59.015 47.619 0.00 0.00 0.00 5.36
1568 1713 2.789409 AGTCTACAAATCCACAGCCC 57.211 50.000 0.00 0.00 0.00 5.19
1569 1714 4.798574 CAAAAGTCTACAAATCCACAGCC 58.201 43.478 0.00 0.00 0.00 4.85
1575 1720 5.705609 TCCAAGCAAAAGTCTACAAATCC 57.294 39.130 0.00 0.00 0.00 3.01
1590 1735 5.932455 TCATCATCTCACATATTCCAAGCA 58.068 37.500 0.00 0.00 0.00 3.91
1591 1736 6.485984 AGTTCATCATCTCACATATTCCAAGC 59.514 38.462 0.00 0.00 0.00 4.01
1592 1737 8.447924 AAGTTCATCATCTCACATATTCCAAG 57.552 34.615 0.00 0.00 0.00 3.61
1593 1738 9.330063 GTAAGTTCATCATCTCACATATTCCAA 57.670 33.333 0.00 0.00 0.00 3.53
1596 1741 7.653713 ACGGTAAGTTCATCATCTCACATATTC 59.346 37.037 0.00 0.00 0.00 1.75
1598 1743 7.055667 ACGGTAAGTTCATCATCTCACATAT 57.944 36.000 0.00 0.00 0.00 1.78
1603 1748 7.818997 ACTATACGGTAAGTTCATCATCTCA 57.181 36.000 0.00 0.00 0.00 3.27
1606 1751 9.962783 ACTTTACTATACGGTAAGTTCATCATC 57.037 33.333 7.83 0.00 33.90 2.92
1611 1756 8.739039 TGCTAACTTTACTATACGGTAAGTTCA 58.261 33.333 7.52 0.51 33.90 3.18
1612 1757 9.014533 GTGCTAACTTTACTATACGGTAAGTTC 57.985 37.037 7.52 0.00 33.90 3.01
1613 1758 7.976175 GGTGCTAACTTTACTATACGGTAAGTT 59.024 37.037 8.87 8.87 33.90 2.66
1614 1759 7.122650 TGGTGCTAACTTTACTATACGGTAAGT 59.877 37.037 0.00 0.66 33.90 2.24
1615 1760 7.483307 TGGTGCTAACTTTACTATACGGTAAG 58.517 38.462 0.00 0.00 33.90 2.34
1616 1761 7.403312 TGGTGCTAACTTTACTATACGGTAA 57.597 36.000 0.00 0.00 0.00 2.85
1617 1762 7.403312 TTGGTGCTAACTTTACTATACGGTA 57.597 36.000 0.00 0.00 0.00 4.02
1618 1763 5.920193 TGGTGCTAACTTTACTATACGGT 57.080 39.130 0.00 0.00 0.00 4.83
1619 1764 8.876275 TTATTGGTGCTAACTTTACTATACGG 57.124 34.615 0.00 0.00 0.00 4.02
1639 1784 9.169468 GTACGAATCTAAACATGCCATTTATTG 57.831 33.333 0.00 0.00 0.00 1.90
1640 1785 8.898761 TGTACGAATCTAAACATGCCATTTATT 58.101 29.630 0.00 0.00 0.00 1.40
1641 1786 8.342634 GTGTACGAATCTAAACATGCCATTTAT 58.657 33.333 0.00 0.00 0.00 1.40
1642 1787 7.551262 AGTGTACGAATCTAAACATGCCATTTA 59.449 33.333 0.00 0.00 0.00 1.40
1643 1788 6.374333 AGTGTACGAATCTAAACATGCCATTT 59.626 34.615 0.00 0.00 0.00 2.32
1644 1789 5.880332 AGTGTACGAATCTAAACATGCCATT 59.120 36.000 0.00 0.00 0.00 3.16
1645 1790 5.428253 AGTGTACGAATCTAAACATGCCAT 58.572 37.500 0.00 0.00 0.00 4.40
1646 1791 4.827692 AGTGTACGAATCTAAACATGCCA 58.172 39.130 0.00 0.00 0.00 4.92
1647 1792 5.796350 AAGTGTACGAATCTAAACATGCC 57.204 39.130 0.00 0.00 0.00 4.40
1648 1793 5.508224 GCAAAGTGTACGAATCTAAACATGC 59.492 40.000 0.00 0.00 0.00 4.06
1649 1794 6.598525 TGCAAAGTGTACGAATCTAAACATG 58.401 36.000 0.00 0.00 0.00 3.21
1650 1795 6.649141 TCTGCAAAGTGTACGAATCTAAACAT 59.351 34.615 0.00 0.00 0.00 2.71
1651 1796 5.986741 TCTGCAAAGTGTACGAATCTAAACA 59.013 36.000 0.00 0.00 0.00 2.83
1652 1797 6.462073 TCTGCAAAGTGTACGAATCTAAAC 57.538 37.500 0.00 0.00 0.00 2.01
1653 1798 6.649141 ACATCTGCAAAGTGTACGAATCTAAA 59.351 34.615 0.00 0.00 0.00 1.85
1654 1799 6.163476 ACATCTGCAAAGTGTACGAATCTAA 58.837 36.000 0.00 0.00 0.00 2.10
1655 1800 5.720202 ACATCTGCAAAGTGTACGAATCTA 58.280 37.500 0.00 0.00 0.00 1.98
1656 1801 4.569943 ACATCTGCAAAGTGTACGAATCT 58.430 39.130 0.00 0.00 0.00 2.40
1657 1802 4.928661 ACATCTGCAAAGTGTACGAATC 57.071 40.909 0.00 0.00 0.00 2.52
1658 1803 5.874810 ACATACATCTGCAAAGTGTACGAAT 59.125 36.000 7.42 0.00 31.79 3.34
1659 1804 5.234752 ACATACATCTGCAAAGTGTACGAA 58.765 37.500 7.42 0.00 31.79 3.85
1660 1805 4.816392 ACATACATCTGCAAAGTGTACGA 58.184 39.130 7.42 0.00 31.79 3.43
1661 1806 4.864806 AGACATACATCTGCAAAGTGTACG 59.135 41.667 7.42 3.39 31.79 3.67
1662 1807 7.258441 TCTAGACATACATCTGCAAAGTGTAC 58.742 38.462 7.42 0.00 31.79 2.90
1663 1808 7.404671 TCTAGACATACATCTGCAAAGTGTA 57.595 36.000 7.64 7.64 33.35 2.90
1664 1809 6.286240 TCTAGACATACATCTGCAAAGTGT 57.714 37.500 0.00 4.08 0.00 3.55
1665 1810 7.601073 TTTCTAGACATACATCTGCAAAGTG 57.399 36.000 0.00 0.00 0.00 3.16
1666 1811 7.335422 CCTTTTCTAGACATACATCTGCAAAGT 59.665 37.037 0.00 0.00 0.00 2.66
1667 1812 7.550551 TCCTTTTCTAGACATACATCTGCAAAG 59.449 37.037 0.00 0.00 0.00 2.77
1668 1813 7.394016 TCCTTTTCTAGACATACATCTGCAAA 58.606 34.615 0.00 0.00 0.00 3.68
1669 1814 6.946340 TCCTTTTCTAGACATACATCTGCAA 58.054 36.000 0.00 0.00 0.00 4.08
1670 1815 6.544928 TCCTTTTCTAGACATACATCTGCA 57.455 37.500 0.00 0.00 0.00 4.41
1671 1816 7.816995 CCTATCCTTTTCTAGACATACATCTGC 59.183 40.741 0.00 0.00 0.00 4.26
1672 1817 7.816995 GCCTATCCTTTTCTAGACATACATCTG 59.183 40.741 0.00 0.00 0.00 2.90
1673 1818 7.732593 AGCCTATCCTTTTCTAGACATACATCT 59.267 37.037 0.00 0.00 0.00 2.90
1674 1819 7.902087 AGCCTATCCTTTTCTAGACATACATC 58.098 38.462 0.00 0.00 0.00 3.06
1675 1820 7.863901 AGCCTATCCTTTTCTAGACATACAT 57.136 36.000 0.00 0.00 0.00 2.29
1676 1821 8.958060 ATAGCCTATCCTTTTCTAGACATACA 57.042 34.615 0.00 0.00 0.00 2.29
1679 1824 8.817876 GGTTATAGCCTATCCTTTTCTAGACAT 58.182 37.037 0.00 0.00 0.00 3.06
1680 1825 7.039923 CGGTTATAGCCTATCCTTTTCTAGACA 60.040 40.741 3.94 0.00 0.00 3.41
1681 1826 7.314393 CGGTTATAGCCTATCCTTTTCTAGAC 58.686 42.308 3.94 0.00 0.00 2.59
1682 1827 6.071503 GCGGTTATAGCCTATCCTTTTCTAGA 60.072 42.308 3.94 0.00 0.00 2.43
1683 1828 6.071278 AGCGGTTATAGCCTATCCTTTTCTAG 60.071 42.308 3.94 0.00 34.64 2.43
1684 1829 5.778750 AGCGGTTATAGCCTATCCTTTTCTA 59.221 40.000 3.94 0.00 34.64 2.10
1685 1830 4.593634 AGCGGTTATAGCCTATCCTTTTCT 59.406 41.667 3.94 0.00 34.64 2.52
1686 1831 4.895961 AGCGGTTATAGCCTATCCTTTTC 58.104 43.478 3.94 0.00 34.64 2.29
1687 1832 4.976540 AGCGGTTATAGCCTATCCTTTT 57.023 40.909 3.94 0.00 34.64 2.27
1688 1833 5.046520 CCTTAGCGGTTATAGCCTATCCTTT 60.047 44.000 3.94 0.00 34.64 3.11
1689 1834 4.466726 CCTTAGCGGTTATAGCCTATCCTT 59.533 45.833 3.94 0.00 34.64 3.36
1690 1835 4.024670 CCTTAGCGGTTATAGCCTATCCT 58.975 47.826 3.94 0.00 34.64 3.24
1691 1836 3.132467 CCCTTAGCGGTTATAGCCTATCC 59.868 52.174 3.94 0.00 34.64 2.59
1692 1837 3.768215 ACCCTTAGCGGTTATAGCCTATC 59.232 47.826 3.94 0.00 29.19 2.08
1693 1838 3.787742 ACCCTTAGCGGTTATAGCCTAT 58.212 45.455 3.94 0.00 29.19 2.57
1694 1839 3.249481 ACCCTTAGCGGTTATAGCCTA 57.751 47.619 3.94 0.00 29.19 3.93
1695 1840 2.098618 ACCCTTAGCGGTTATAGCCT 57.901 50.000 3.94 0.00 29.19 4.58
1696 1841 2.876550 CAAACCCTTAGCGGTTATAGCC 59.123 50.000 0.00 0.00 45.63 3.93
1697 1842 3.538591 ACAAACCCTTAGCGGTTATAGC 58.461 45.455 0.00 0.00 45.63 2.97
1698 1843 5.180271 TCAACAAACCCTTAGCGGTTATAG 58.820 41.667 0.00 3.25 45.63 1.31
1699 1844 5.163281 TCAACAAACCCTTAGCGGTTATA 57.837 39.130 0.00 0.00 45.63 0.98
1700 1845 4.023726 TCAACAAACCCTTAGCGGTTAT 57.976 40.909 0.00 0.00 45.63 1.89
1701 1846 3.488778 TCAACAAACCCTTAGCGGTTA 57.511 42.857 0.00 0.00 45.63 2.85
1703 1848 2.351706 TTCAACAAACCCTTAGCGGT 57.648 45.000 0.00 0.00 37.93 5.68
1704 1849 3.366985 GGATTTCAACAAACCCTTAGCGG 60.367 47.826 0.00 0.00 0.00 5.52
1705 1850 3.506067 AGGATTTCAACAAACCCTTAGCG 59.494 43.478 0.00 0.00 0.00 4.26
1706 1851 5.010617 TCAAGGATTTCAACAAACCCTTAGC 59.989 40.000 0.00 0.00 32.05 3.09
1707 1852 6.648879 TCAAGGATTTCAACAAACCCTTAG 57.351 37.500 0.00 0.00 32.05 2.18
1708 1853 6.460399 CGTTCAAGGATTTCAACAAACCCTTA 60.460 38.462 0.00 0.00 32.05 2.69
1709 1854 5.670485 GTTCAAGGATTTCAACAAACCCTT 58.330 37.500 0.00 0.00 32.96 3.95
1710 1855 4.202111 CGTTCAAGGATTTCAACAAACCCT 60.202 41.667 0.00 0.00 0.00 4.34
1711 1856 4.048504 CGTTCAAGGATTTCAACAAACCC 58.951 43.478 0.00 0.00 0.00 4.11
1712 1857 3.489416 GCGTTCAAGGATTTCAACAAACC 59.511 43.478 0.00 0.00 0.00 3.27
1713 1858 3.489416 GGCGTTCAAGGATTTCAACAAAC 59.511 43.478 0.00 0.00 0.00 2.93
1714 1859 3.131223 TGGCGTTCAAGGATTTCAACAAA 59.869 39.130 0.00 0.00 0.00 2.83
1715 1860 2.690497 TGGCGTTCAAGGATTTCAACAA 59.310 40.909 0.00 0.00 0.00 2.83
1716 1861 2.293122 CTGGCGTTCAAGGATTTCAACA 59.707 45.455 0.00 0.00 0.00 3.33
1717 1862 2.351738 CCTGGCGTTCAAGGATTTCAAC 60.352 50.000 0.00 0.00 0.00 3.18
1718 1863 1.885887 CCTGGCGTTCAAGGATTTCAA 59.114 47.619 0.00 0.00 0.00 2.69
1719 1864 1.073125 TCCTGGCGTTCAAGGATTTCA 59.927 47.619 0.00 0.00 0.00 2.69
1720 1865 1.821216 TCCTGGCGTTCAAGGATTTC 58.179 50.000 0.00 0.00 0.00 2.17
1721 1866 2.286365 TTCCTGGCGTTCAAGGATTT 57.714 45.000 0.00 0.00 0.00 2.17
1722 1867 2.514458 ATTCCTGGCGTTCAAGGATT 57.486 45.000 0.00 0.00 0.00 3.01
1723 1868 2.369394 GAATTCCTGGCGTTCAAGGAT 58.631 47.619 0.00 0.00 0.00 3.24
1724 1869 1.613255 GGAATTCCTGGCGTTCAAGGA 60.613 52.381 17.73 0.00 0.00 3.36
1725 1870 0.811281 GGAATTCCTGGCGTTCAAGG 59.189 55.000 17.73 0.00 0.00 3.61
1726 1871 0.811281 GGGAATTCCTGGCGTTCAAG 59.189 55.000 23.63 0.00 35.95 3.02
1727 1872 0.610785 GGGGAATTCCTGGCGTTCAA 60.611 55.000 23.63 0.00 35.95 2.69
1728 1873 1.001393 GGGGAATTCCTGGCGTTCA 60.001 57.895 23.63 0.00 35.95 3.18
1729 1874 1.001393 TGGGGAATTCCTGGCGTTC 60.001 57.895 23.63 5.32 35.95 3.95
1730 1875 1.304134 GTGGGGAATTCCTGGCGTT 60.304 57.895 23.63 0.00 35.95 4.84
1731 1876 2.198304 GAGTGGGGAATTCCTGGCGT 62.198 60.000 23.63 5.61 35.95 5.68
1732 1877 1.452108 GAGTGGGGAATTCCTGGCG 60.452 63.158 23.63 0.00 35.95 5.69
1733 1878 0.332972 AAGAGTGGGGAATTCCTGGC 59.667 55.000 23.63 13.26 35.95 4.85
1734 1879 2.907458 AAAGAGTGGGGAATTCCTGG 57.093 50.000 23.63 0.00 35.95 4.45
1735 1880 3.689649 CGTAAAAGAGTGGGGAATTCCTG 59.310 47.826 23.63 0.00 35.95 3.86
1736 1881 3.329814 ACGTAAAAGAGTGGGGAATTCCT 59.670 43.478 23.63 3.87 35.95 3.36
1737 1882 3.682696 ACGTAAAAGAGTGGGGAATTCC 58.317 45.455 16.74 16.74 0.00 3.01
1738 1883 5.700722 AAACGTAAAAGAGTGGGGAATTC 57.299 39.130 0.00 0.00 0.00 2.17
1739 1884 6.461927 GGAAAAACGTAAAAGAGTGGGGAATT 60.462 38.462 0.00 0.00 0.00 2.17
1740 1885 5.010314 GGAAAAACGTAAAAGAGTGGGGAAT 59.990 40.000 0.00 0.00 0.00 3.01
1741 1886 4.338964 GGAAAAACGTAAAAGAGTGGGGAA 59.661 41.667 0.00 0.00 0.00 3.97
1742 1887 3.884693 GGAAAAACGTAAAAGAGTGGGGA 59.115 43.478 0.00 0.00 0.00 4.81
1743 1888 3.887110 AGGAAAAACGTAAAAGAGTGGGG 59.113 43.478 0.00 0.00 0.00 4.96
1744 1889 5.509716 AAGGAAAAACGTAAAAGAGTGGG 57.490 39.130 0.00 0.00 0.00 4.61
1745 1890 6.557110 TCAAAGGAAAAACGTAAAAGAGTGG 58.443 36.000 0.00 0.00 0.00 4.00
1746 1891 7.378728 GGATCAAAGGAAAAACGTAAAAGAGTG 59.621 37.037 0.00 0.00 0.00 3.51
1747 1892 7.284716 AGGATCAAAGGAAAAACGTAAAAGAGT 59.715 33.333 0.00 0.00 0.00 3.24
1748 1893 7.649057 AGGATCAAAGGAAAAACGTAAAAGAG 58.351 34.615 0.00 0.00 0.00 2.85
1749 1894 7.576861 AGGATCAAAGGAAAAACGTAAAAGA 57.423 32.000 0.00 0.00 0.00 2.52
1750 1895 8.539674 CAAAGGATCAAAGGAAAAACGTAAAAG 58.460 33.333 0.00 0.00 0.00 2.27
1751 1896 8.251721 TCAAAGGATCAAAGGAAAAACGTAAAA 58.748 29.630 0.00 0.00 0.00 1.52
1752 1897 7.773149 TCAAAGGATCAAAGGAAAAACGTAAA 58.227 30.769 0.00 0.00 0.00 2.01
1753 1898 7.336161 TCAAAGGATCAAAGGAAAAACGTAA 57.664 32.000 0.00 0.00 0.00 3.18
1754 1899 6.945938 TCAAAGGATCAAAGGAAAAACGTA 57.054 33.333 0.00 0.00 0.00 3.57
1755 1900 5.845391 TCAAAGGATCAAAGGAAAAACGT 57.155 34.783 0.00 0.00 0.00 3.99
1772 1917 3.526931 TTCCGTCTCTGCCTATCAAAG 57.473 47.619 0.00 0.00 0.00 2.77
1773 1918 3.432186 CCATTCCGTCTCTGCCTATCAAA 60.432 47.826 0.00 0.00 0.00 2.69
1774 1919 2.103094 CCATTCCGTCTCTGCCTATCAA 59.897 50.000 0.00 0.00 0.00 2.57
1775 1920 1.688735 CCATTCCGTCTCTGCCTATCA 59.311 52.381 0.00 0.00 0.00 2.15
1776 1921 1.606737 GCCATTCCGTCTCTGCCTATC 60.607 57.143 0.00 0.00 0.00 2.08
1777 1922 0.394565 GCCATTCCGTCTCTGCCTAT 59.605 55.000 0.00 0.00 0.00 2.57
1778 1923 0.975556 TGCCATTCCGTCTCTGCCTA 60.976 55.000 0.00 0.00 0.00 3.93
1779 1924 2.293318 TGCCATTCCGTCTCTGCCT 61.293 57.895 0.00 0.00 0.00 4.75
1780 1925 2.109126 GTGCCATTCCGTCTCTGCC 61.109 63.158 0.00 0.00 0.00 4.85
1781 1926 0.955428 TTGTGCCATTCCGTCTCTGC 60.955 55.000 0.00 0.00 0.00 4.26
1782 1927 1.197721 GTTTGTGCCATTCCGTCTCTG 59.802 52.381 0.00 0.00 0.00 3.35
1783 1928 1.523758 GTTTGTGCCATTCCGTCTCT 58.476 50.000 0.00 0.00 0.00 3.10
1784 1929 0.521735 GGTTTGTGCCATTCCGTCTC 59.478 55.000 0.00 0.00 0.00 3.36
1785 1930 0.893727 GGGTTTGTGCCATTCCGTCT 60.894 55.000 0.00 0.00 0.00 4.18
1786 1931 1.175983 TGGGTTTGTGCCATTCCGTC 61.176 55.000 0.00 0.00 0.00 4.79
1787 1932 1.152652 TGGGTTTGTGCCATTCCGT 60.153 52.632 0.00 0.00 0.00 4.69
1788 1933 1.178534 AGTGGGTTTGTGCCATTCCG 61.179 55.000 0.00 0.00 0.00 4.30
1789 1934 1.000843 GAAGTGGGTTTGTGCCATTCC 59.999 52.381 0.00 0.00 0.00 3.01
1790 1935 1.686052 TGAAGTGGGTTTGTGCCATTC 59.314 47.619 0.00 0.00 0.00 2.67
1791 1936 1.412343 GTGAAGTGGGTTTGTGCCATT 59.588 47.619 0.00 0.00 0.00 3.16
1792 1937 1.039856 GTGAAGTGGGTTTGTGCCAT 58.960 50.000 0.00 0.00 0.00 4.40
1793 1938 0.323816 TGTGAAGTGGGTTTGTGCCA 60.324 50.000 0.00 0.00 0.00 4.92
1794 1939 0.102300 GTGTGAAGTGGGTTTGTGCC 59.898 55.000 0.00 0.00 0.00 5.01
1795 1940 0.102300 GGTGTGAAGTGGGTTTGTGC 59.898 55.000 0.00 0.00 0.00 4.57
1796 1941 1.762708 AGGTGTGAAGTGGGTTTGTG 58.237 50.000 0.00 0.00 0.00 3.33
1797 1942 2.525105 AAGGTGTGAAGTGGGTTTGT 57.475 45.000 0.00 0.00 0.00 2.83
1798 1943 3.520569 CAAAAGGTGTGAAGTGGGTTTG 58.479 45.455 0.00 0.00 0.00 2.93
1799 1944 2.093711 GCAAAAGGTGTGAAGTGGGTTT 60.094 45.455 0.00 0.00 0.00 3.27
1800 1945 1.480545 GCAAAAGGTGTGAAGTGGGTT 59.519 47.619 0.00 0.00 0.00 4.11
1801 1946 1.111277 GCAAAAGGTGTGAAGTGGGT 58.889 50.000 0.00 0.00 0.00 4.51
1802 1947 0.389025 GGCAAAAGGTGTGAAGTGGG 59.611 55.000 0.00 0.00 0.00 4.61
1803 1948 0.030638 CGGCAAAAGGTGTGAAGTGG 59.969 55.000 0.00 0.00 0.00 4.00
1804 1949 1.002468 CTCGGCAAAAGGTGTGAAGTG 60.002 52.381 0.00 0.00 0.00 3.16
1805 1950 1.308998 CTCGGCAAAAGGTGTGAAGT 58.691 50.000 0.00 0.00 0.00 3.01
1806 1951 1.002468 CACTCGGCAAAAGGTGTGAAG 60.002 52.381 0.00 0.00 0.00 3.02
1807 1952 1.021202 CACTCGGCAAAAGGTGTGAA 58.979 50.000 0.00 0.00 0.00 3.18
1808 1953 0.817634 CCACTCGGCAAAAGGTGTGA 60.818 55.000 0.00 0.00 0.00 3.58
1809 1954 1.654220 CCACTCGGCAAAAGGTGTG 59.346 57.895 0.00 0.00 0.00 3.82
1810 1955 4.157607 CCACTCGGCAAAAGGTGT 57.842 55.556 0.00 0.00 0.00 4.16
1821 1966 1.887707 GCTAAATCCCCGCCACTCG 60.888 63.158 0.00 0.00 38.08 4.18
1822 1967 0.815615 CTGCTAAATCCCCGCCACTC 60.816 60.000 0.00 0.00 0.00 3.51
1823 1968 1.224592 CTGCTAAATCCCCGCCACT 59.775 57.895 0.00 0.00 0.00 4.00
1829 1974 4.342092 ACATAATGCAACTGCTAAATCCCC 59.658 41.667 2.95 0.00 42.66 4.81
1830 1975 5.300286 AGACATAATGCAACTGCTAAATCCC 59.700 40.000 2.95 0.00 42.66 3.85
1843 1988 3.455910 AGCAGGGAACTAGACATAATGCA 59.544 43.478 0.00 0.00 40.21 3.96
1844 1989 3.812053 CAGCAGGGAACTAGACATAATGC 59.188 47.826 0.00 0.00 40.21 3.56
1852 1997 2.290847 CCAGCAGCAGGGAACTAGA 58.709 57.895 0.00 0.00 40.21 2.43
1864 2009 7.445121 TGTATCAAGAAATACTATCCCAGCAG 58.555 38.462 0.00 0.00 33.98 4.24
1867 2012 8.099537 AGCATGTATCAAGAAATACTATCCCAG 58.900 37.037 0.00 0.00 33.98 4.45
1887 2032 7.297614 ACATATTTTGGGACCTTATAGCATGT 58.702 34.615 0.00 0.00 0.00 3.21
1913 2058 9.748708 CATGAATCCGATACCATTTTTAATTGT 57.251 29.630 0.00 0.00 0.00 2.71
1914 2059 9.964303 TCATGAATCCGATACCATTTTTAATTG 57.036 29.630 0.00 0.00 0.00 2.32
1917 2062 9.796120 GTTTCATGAATCCGATACCATTTTTAA 57.204 29.630 9.40 0.00 0.00 1.52
1918 2063 8.961634 TGTTTCATGAATCCGATACCATTTTTA 58.038 29.630 9.40 0.00 0.00 1.52
1919 2064 7.835822 TGTTTCATGAATCCGATACCATTTTT 58.164 30.769 9.40 0.00 0.00 1.94
1920 2065 7.403312 TGTTTCATGAATCCGATACCATTTT 57.597 32.000 9.40 0.00 0.00 1.82
1921 2066 7.285172 TCATGTTTCATGAATCCGATACCATTT 59.715 33.333 9.40 0.00 0.00 2.32
1922 2067 6.772233 TCATGTTTCATGAATCCGATACCATT 59.228 34.615 9.40 0.00 0.00 3.16
1923 2068 6.298361 TCATGTTTCATGAATCCGATACCAT 58.702 36.000 9.40 0.00 0.00 3.55
1924 2069 5.679601 TCATGTTTCATGAATCCGATACCA 58.320 37.500 9.40 0.00 0.00 3.25
1925 2070 6.260936 AGTTCATGTTTCATGAATCCGATACC 59.739 38.462 22.17 10.91 39.80 2.73
1926 2071 7.251704 AGTTCATGTTTCATGAATCCGATAC 57.748 36.000 22.17 12.06 39.80 2.24
1927 2072 7.864108 AAGTTCATGTTTCATGAATCCGATA 57.136 32.000 22.17 0.00 39.80 2.92
1931 2076 7.917505 GTCCATAAGTTCATGTTTCATGAATCC 59.082 37.037 22.17 13.58 39.80 3.01
1938 2083 5.105797 GCCATGTCCATAAGTTCATGTTTCA 60.106 40.000 0.00 0.00 36.81 2.69
1944 2089 4.539726 ACATGCCATGTCCATAAGTTCAT 58.460 39.130 4.03 0.00 39.92 2.57
1949 2094 5.357878 AGTTACAACATGCCATGTCCATAAG 59.642 40.000 11.38 0.46 44.07 1.73
1974 2119 7.270047 CGGAGTATGAGTTACTATGGGAAAAA 58.730 38.462 0.00 0.00 41.35 1.94
1979 2124 4.150359 ACCGGAGTATGAGTTACTATGGG 58.850 47.826 9.46 2.92 41.35 4.00
1980 2125 5.786264 AACCGGAGTATGAGTTACTATGG 57.214 43.478 9.46 0.00 41.35 2.74
1995 2140 4.189231 CCCAAAACTCATAGTAACCGGAG 58.811 47.826 9.46 0.00 0.00 4.63
1996 2141 3.620472 GCCCAAAACTCATAGTAACCGGA 60.620 47.826 9.46 0.00 0.00 5.14
1997 2142 2.681344 GCCCAAAACTCATAGTAACCGG 59.319 50.000 0.00 0.00 0.00 5.28
1998 2143 3.340034 TGCCCAAAACTCATAGTAACCG 58.660 45.455 0.00 0.00 0.00 4.44
1999 2144 5.914898 AATGCCCAAAACTCATAGTAACC 57.085 39.130 0.00 0.00 0.00 2.85
2000 2145 6.972901 GCTTAATGCCCAAAACTCATAGTAAC 59.027 38.462 0.00 0.00 35.15 2.50
2001 2146 6.661377 TGCTTAATGCCCAAAACTCATAGTAA 59.339 34.615 0.00 0.00 42.00 2.24
2002 2147 6.184068 TGCTTAATGCCCAAAACTCATAGTA 58.816 36.000 0.00 0.00 42.00 1.82
2003 2148 5.016173 TGCTTAATGCCCAAAACTCATAGT 58.984 37.500 0.00 0.00 42.00 2.12
2004 2149 5.581126 TGCTTAATGCCCAAAACTCATAG 57.419 39.130 0.00 0.00 42.00 2.23
2005 2150 5.991933 TTGCTTAATGCCCAAAACTCATA 57.008 34.783 0.00 0.00 42.00 2.15
2009 2154 3.135530 TGGTTTGCTTAATGCCCAAAACT 59.864 39.130 0.00 0.00 42.00 2.66
2011 2156 3.845781 TGGTTTGCTTAATGCCCAAAA 57.154 38.095 0.00 0.00 42.00 2.44
2049 2202 8.662781 TCAGCTATGGTTAAGAAATATGACAC 57.337 34.615 0.00 0.00 0.00 3.67
2050 2203 9.679661 TTTCAGCTATGGTTAAGAAATATGACA 57.320 29.630 0.00 0.00 0.00 3.58
2056 2209 9.259832 AGGAAATTTCAGCTATGGTTAAGAAAT 57.740 29.630 19.49 0.00 37.31 2.17
2057 2210 8.522830 CAGGAAATTTCAGCTATGGTTAAGAAA 58.477 33.333 19.49 0.00 0.00 2.52
2058 2211 7.669722 ACAGGAAATTTCAGCTATGGTTAAGAA 59.330 33.333 19.49 0.00 0.00 2.52
2061 2214 7.775053 AACAGGAAATTTCAGCTATGGTTAA 57.225 32.000 19.49 0.00 0.00 2.01
2062 2215 7.885922 TGTAACAGGAAATTTCAGCTATGGTTA 59.114 33.333 19.49 12.25 0.00 2.85
2063 2216 6.719370 TGTAACAGGAAATTTCAGCTATGGTT 59.281 34.615 19.49 13.05 0.00 3.67
2064 2217 6.245408 TGTAACAGGAAATTTCAGCTATGGT 58.755 36.000 19.49 10.44 0.00 3.55
2065 2218 6.757897 TGTAACAGGAAATTTCAGCTATGG 57.242 37.500 19.49 3.58 0.00 2.74
2066 2219 8.680903 AGAATGTAACAGGAAATTTCAGCTATG 58.319 33.333 19.49 11.43 0.00 2.23
2067 2220 8.814038 AGAATGTAACAGGAAATTTCAGCTAT 57.186 30.769 19.49 4.58 0.00 2.97
2068 2221 8.635765 AAGAATGTAACAGGAAATTTCAGCTA 57.364 30.769 19.49 4.98 0.00 3.32
2069 2222 7.530426 AAGAATGTAACAGGAAATTTCAGCT 57.470 32.000 19.49 5.88 0.00 4.24
2070 2223 8.084684 AGAAAGAATGTAACAGGAAATTTCAGC 58.915 33.333 19.49 3.58 0.00 4.26
2071 2224 9.403110 CAGAAAGAATGTAACAGGAAATTTCAG 57.597 33.333 19.49 13.27 0.00 3.02
2072 2225 7.867403 GCAGAAAGAATGTAACAGGAAATTTCA 59.133 33.333 19.49 0.00 0.00 2.69
2073 2226 7.061094 CGCAGAAAGAATGTAACAGGAAATTTC 59.939 37.037 9.83 9.83 0.00 2.17
2076 2229 5.705441 TCGCAGAAAGAATGTAACAGGAAAT 59.295 36.000 0.00 0.00 0.00 2.17
2080 2233 4.245660 TCTCGCAGAAAGAATGTAACAGG 58.754 43.478 0.00 0.00 34.09 4.00
2084 2237 4.093408 GCACATCTCGCAGAAAGAATGTAA 59.907 41.667 0.00 0.00 34.09 2.41
2092 2245 1.291184 CGGTGCACATCTCGCAGAAA 61.291 55.000 20.43 0.00 40.78 2.52
2093 2246 1.737735 CGGTGCACATCTCGCAGAA 60.738 57.895 20.43 0.00 40.78 3.02
2094 2247 2.125952 CGGTGCACATCTCGCAGA 60.126 61.111 20.43 0.00 40.78 4.26
2095 2248 3.190849 CCGGTGCACATCTCGCAG 61.191 66.667 20.43 0.00 40.78 5.18
2134 2287 1.922135 CTAACATGGCCGTGCACACC 61.922 60.000 25.30 17.76 0.00 4.16
2135 2288 0.953471 TCTAACATGGCCGTGCACAC 60.953 55.000 25.30 8.06 0.00 3.82
2175 2328 1.069227 CACTGGACTTTTAACTGCGCC 60.069 52.381 4.18 0.00 0.00 6.53
2177 2330 3.311322 TGTTCACTGGACTTTTAACTGCG 59.689 43.478 0.00 0.00 0.00 5.18
2217 2370 5.784750 TCTCACATATTCGAAGCAAAGTG 57.215 39.130 3.35 8.13 0.00 3.16
2227 2380 7.515215 CGGTAACTTTGTCATCTCACATATTCG 60.515 40.741 0.00 0.00 0.00 3.34
2243 2396 7.169645 TGCTAACTTTAGTACACGGTAACTTTG 59.830 37.037 0.00 0.00 33.32 2.77
2244 2397 7.169813 GTGCTAACTTTAGTACACGGTAACTTT 59.830 37.037 11.15 0.00 43.22 2.66
2247 2400 5.346011 GGTGCTAACTTTAGTACACGGTAAC 59.654 44.000 16.14 0.00 44.80 2.50
2252 2405 7.585286 TTATTGGTGCTAACTTTAGTACACG 57.415 36.000 16.14 0.00 44.80 4.49
2487 2735 1.137086 AGCATAGTTCCAGTAGTGCCG 59.863 52.381 0.00 0.00 33.29 5.69
2607 2855 4.756642 CACTTATCAGTCAAGCTTTCACCA 59.243 41.667 0.00 0.00 0.00 4.17
2679 2946 6.211986 ACAATGTTTCCAAAGGATCATGACAT 59.788 34.615 0.00 0.00 31.17 3.06
2733 3001 4.001652 ACTCACACTGATCATTGCTTCAG 58.998 43.478 12.62 12.28 43.97 3.02
2815 3088 5.293324 TCGTTAGTCCAACATAATCACATGC 59.707 40.000 0.00 0.00 36.92 4.06
2857 3130 5.954752 TGACCCATTGGACTAAATATTTGCA 59.045 36.000 11.05 0.00 34.81 4.08
2861 3134 5.705400 CCCTGACCCATTGGACTAAATATT 58.295 41.667 3.62 0.00 34.81 1.28
2890 3163 5.942872 AGAAAATTGGACTAACAAGCGATG 58.057 37.500 0.00 0.00 33.23 3.84
2894 3167 8.648557 AAAGAAAGAAAATTGGACTAACAAGC 57.351 30.769 0.00 0.00 33.23 4.01
3006 3281 4.519213 TGGAAGAACCGAAAGACAAAGAA 58.481 39.130 0.00 0.00 42.61 2.52
3051 3507 9.554724 GCGAAAAATGTTGTATAGATGAAAAGA 57.445 29.630 0.00 0.00 0.00 2.52
3052 3508 9.559958 AGCGAAAAATGTTGTATAGATGAAAAG 57.440 29.630 0.00 0.00 0.00 2.27
3053 3509 9.554724 GAGCGAAAAATGTTGTATAGATGAAAA 57.445 29.630 0.00 0.00 0.00 2.29
3054 3510 8.726068 TGAGCGAAAAATGTTGTATAGATGAAA 58.274 29.630 0.00 0.00 0.00 2.69
3055 3511 8.262715 TGAGCGAAAAATGTTGTATAGATGAA 57.737 30.769 0.00 0.00 0.00 2.57
3056 3512 7.841915 TGAGCGAAAAATGTTGTATAGATGA 57.158 32.000 0.00 0.00 0.00 2.92
3057 3513 8.337532 TCATGAGCGAAAAATGTTGTATAGATG 58.662 33.333 0.00 0.00 0.00 2.90
3058 3514 8.437360 TCATGAGCGAAAAATGTTGTATAGAT 57.563 30.769 0.00 0.00 0.00 1.98
3059 3515 7.841915 TCATGAGCGAAAAATGTTGTATAGA 57.158 32.000 0.00 0.00 0.00 1.98
3060 3516 7.962373 TGTTCATGAGCGAAAAATGTTGTATAG 59.038 33.333 5.02 0.00 0.00 1.31
3061 3517 7.748683 GTGTTCATGAGCGAAAAATGTTGTATA 59.251 33.333 5.02 0.00 0.00 1.47
3062 3518 6.582295 GTGTTCATGAGCGAAAAATGTTGTAT 59.418 34.615 5.02 0.00 0.00 2.29
3063 3519 5.912396 GTGTTCATGAGCGAAAAATGTTGTA 59.088 36.000 5.02 0.00 0.00 2.41
3064 3520 4.739716 GTGTTCATGAGCGAAAAATGTTGT 59.260 37.500 5.02 0.00 0.00 3.32
3065 3521 4.977963 AGTGTTCATGAGCGAAAAATGTTG 59.022 37.500 5.02 0.00 0.00 3.33
3066 3522 5.186996 AGTGTTCATGAGCGAAAAATGTT 57.813 34.783 5.02 0.00 0.00 2.71
3067 3523 4.836125 AGTGTTCATGAGCGAAAAATGT 57.164 36.364 5.02 0.00 0.00 2.71
3068 3524 5.455392 AGAAGTGTTCATGAGCGAAAAATG 58.545 37.500 5.02 0.00 0.00 2.32
3182 3639 8.272866 AGTTTAAATACTGAAAAATGTTTGCGC 58.727 29.630 0.00 0.00 0.00 6.09
3320 3777 7.978975 CCCGAACACCACAATATTCATATTTTT 59.021 33.333 0.00 0.00 30.91 1.94
3321 3778 7.488322 CCCGAACACCACAATATTCATATTTT 58.512 34.615 0.00 0.00 30.91 1.82
3322 3779 6.460953 GCCCGAACACCACAATATTCATATTT 60.461 38.462 0.00 0.00 30.91 1.40
3323 3780 5.009610 GCCCGAACACCACAATATTCATATT 59.990 40.000 0.00 0.00 33.44 1.28
3324 3781 4.518970 GCCCGAACACCACAATATTCATAT 59.481 41.667 0.00 0.00 0.00 1.78
3325 3782 3.880490 GCCCGAACACCACAATATTCATA 59.120 43.478 0.00 0.00 0.00 2.15
3326 3783 2.687935 GCCCGAACACCACAATATTCAT 59.312 45.455 0.00 0.00 0.00 2.57
3327 3784 2.088423 GCCCGAACACCACAATATTCA 58.912 47.619 0.00 0.00 0.00 2.57
3328 3785 1.404035 GGCCCGAACACCACAATATTC 59.596 52.381 0.00 0.00 0.00 1.75
3329 3786 1.470051 GGCCCGAACACCACAATATT 58.530 50.000 0.00 0.00 0.00 1.28
3330 3787 0.746563 CGGCCCGAACACCACAATAT 60.747 55.000 0.00 0.00 0.00 1.28
3331 3788 1.376166 CGGCCCGAACACCACAATA 60.376 57.895 0.00 0.00 0.00 1.90
3370 3827 3.712907 TGCGGGTTAGCTGTCCCC 61.713 66.667 18.34 13.03 40.54 4.81
3402 3883 1.206115 CGTTGTGTTTTTGAGCGGCC 61.206 55.000 0.00 0.00 0.00 6.13
3453 3934 0.677288 TCTTTTCGACGGGAGCTTGA 59.323 50.000 0.00 0.00 0.00 3.02
3454 3935 1.461127 CTTCTTTTCGACGGGAGCTTG 59.539 52.381 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.