Multiple sequence alignment - TraesCS7A01G455800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G455800 chr7A 100.000 4621 0 0 1 4621 652285389 652290009 0.000000e+00 8534.0
1 TraesCS7A01G455800 chr7A 82.362 2489 389 29 1020 3494 652356885 652359337 0.000000e+00 2119.0
2 TraesCS7A01G455800 chr7A 81.387 2509 391 48 1020 3494 652337945 652340411 0.000000e+00 1977.0
3 TraesCS7A01G455800 chr7A 81.636 2445 369 46 1063 3489 652195211 652197593 0.000000e+00 1954.0
4 TraesCS7A01G455800 chr7A 81.338 2422 395 37 1063 3474 652538582 652540956 0.000000e+00 1916.0
5 TraesCS7A01G455800 chr7A 80.737 1438 241 24 1493 2919 652232233 652233645 0.000000e+00 1088.0
6 TraesCS7A01G455800 chr7A 90.762 433 36 4 179 609 672740200 672739770 4.010000e-160 575.0
7 TraesCS7A01G455800 chr7A 82.778 180 4 12 1 179 128002854 128003007 8.060000e-28 135.0
8 TraesCS7A01G455800 chr7D 94.016 2674 136 13 894 3557 566013810 566016469 0.000000e+00 4030.0
9 TraesCS7A01G455800 chr7D 83.240 2494 371 35 1021 3494 565643614 565646080 0.000000e+00 2246.0
10 TraesCS7A01G455800 chr7D 83.286 2489 367 34 1023 3494 566037433 566039889 0.000000e+00 2246.0
11 TraesCS7A01G455800 chr7D 82.379 2480 394 26 1028 3493 565617368 565619818 0.000000e+00 2119.0
12 TraesCS7A01G455800 chr7D 81.412 2437 400 34 1045 3474 566252971 566255361 0.000000e+00 1941.0
13 TraesCS7A01G455800 chr7D 83.590 390 25 18 4210 4587 566016653 566017015 3.450000e-86 329.0
14 TraesCS7A01G455800 chr7B 92.179 2698 170 10 855 3535 617558135 617555462 0.000000e+00 3775.0
15 TraesCS7A01G455800 chr7B 83.133 2490 362 38 1023 3496 616749934 616747487 0.000000e+00 2218.0
16 TraesCS7A01G455800 chr7B 82.706 2498 368 37 1018 3494 616903066 616905520 0.000000e+00 2161.0
17 TraesCS7A01G455800 chr7B 82.617 2491 385 35 1023 3493 617485804 617488266 0.000000e+00 2158.0
18 TraesCS7A01G455800 chr7B 82.310 2442 393 27 1064 3493 616836259 616838673 0.000000e+00 2080.0
19 TraesCS7A01G455800 chr7B 94.021 669 27 5 176 844 720218505 720219160 0.000000e+00 1002.0
20 TraesCS7A01G455800 chr7B 93.403 667 25 7 179 844 20891709 20891061 0.000000e+00 970.0
21 TraesCS7A01G455800 chr7B 84.118 510 46 16 3568 4050 617555394 617554893 1.170000e-125 460.0
22 TraesCS7A01G455800 chr7B 85.294 170 24 1 4453 4621 617558924 617559093 1.710000e-39 174.0
23 TraesCS7A01G455800 chr7B 83.333 108 13 5 4026 4129 381858818 381858924 1.370000e-15 95.3
24 TraesCS7A01G455800 chr3A 95.352 667 29 2 179 844 684771182 684770517 0.000000e+00 1059.0
25 TraesCS7A01G455800 chr3A 90.618 437 37 4 175 609 735410574 735411008 1.110000e-160 577.0
26 TraesCS7A01G455800 chr3A 81.982 111 18 2 4022 4130 20292650 20292760 4.920000e-15 93.5
27 TraesCS7A01G455800 chr4A 94.925 670 33 1 175 844 619720436 619719768 0.000000e+00 1048.0
28 TraesCS7A01G455800 chr4A 96.111 180 6 1 1 179 519605498 519605319 4.520000e-75 292.0
29 TraesCS7A01G455800 chr4A 83.654 104 16 1 4026 4128 550475796 550475899 3.810000e-16 97.1
30 TraesCS7A01G455800 chr6B 93.520 679 30 5 179 844 33382598 33383275 0.000000e+00 998.0
31 TraesCS7A01G455800 chr6B 80.870 115 18 4 4019 4129 9084736 9084622 2.290000e-13 87.9
32 TraesCS7A01G455800 chr1B 93.572 669 24 3 176 844 14567881 14568530 0.000000e+00 979.0
33 TraesCS7A01G455800 chr6A 97.087 412 11 1 176 587 17374573 17374983 0.000000e+00 693.0
34 TraesCS7A01G455800 chr6A 96.538 260 6 2 585 844 17376436 17376692 1.190000e-115 427.0
35 TraesCS7A01G455800 chr2B 96.715 274 6 2 571 844 774611002 774611272 1.960000e-123 453.0
36 TraesCS7A01G455800 chr2B 96.350 274 7 2 571 844 774635940 774636210 9.120000e-122 448.0
37 TraesCS7A01G455800 chr6D 84.071 113 13 5 4026 4134 337847183 337847294 2.270000e-18 104.0
38 TraesCS7A01G455800 chr5D 85.294 102 14 1 4031 4131 383227929 383228030 2.270000e-18 104.0
39 TraesCS7A01G455800 chr4D 84.112 107 12 5 4031 4133 417812777 417812882 1.060000e-16 99.0
40 TraesCS7A01G455800 chrUn 83.333 102 16 1 4031 4131 94809435 94809334 4.920000e-15 93.5
41 TraesCS7A01G455800 chr4B 82.407 108 15 4 4026 4130 601746146 601746040 1.770000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G455800 chr7A 652285389 652290009 4620 False 8534.0 8534 100.0000 1 4621 1 chr7A.!!$F4 4620
1 TraesCS7A01G455800 chr7A 652356885 652359337 2452 False 2119.0 2119 82.3620 1020 3494 1 chr7A.!!$F6 2474
2 TraesCS7A01G455800 chr7A 652337945 652340411 2466 False 1977.0 1977 81.3870 1020 3494 1 chr7A.!!$F5 2474
3 TraesCS7A01G455800 chr7A 652195211 652197593 2382 False 1954.0 1954 81.6360 1063 3489 1 chr7A.!!$F2 2426
4 TraesCS7A01G455800 chr7A 652538582 652540956 2374 False 1916.0 1916 81.3380 1063 3474 1 chr7A.!!$F7 2411
5 TraesCS7A01G455800 chr7A 652232233 652233645 1412 False 1088.0 1088 80.7370 1493 2919 1 chr7A.!!$F3 1426
6 TraesCS7A01G455800 chr7D 565643614 565646080 2466 False 2246.0 2246 83.2400 1021 3494 1 chr7D.!!$F2 2473
7 TraesCS7A01G455800 chr7D 566037433 566039889 2456 False 2246.0 2246 83.2860 1023 3494 1 chr7D.!!$F3 2471
8 TraesCS7A01G455800 chr7D 566013810 566017015 3205 False 2179.5 4030 88.8030 894 4587 2 chr7D.!!$F5 3693
9 TraesCS7A01G455800 chr7D 565617368 565619818 2450 False 2119.0 2119 82.3790 1028 3493 1 chr7D.!!$F1 2465
10 TraesCS7A01G455800 chr7D 566252971 566255361 2390 False 1941.0 1941 81.4120 1045 3474 1 chr7D.!!$F4 2429
11 TraesCS7A01G455800 chr7B 616747487 616749934 2447 True 2218.0 2218 83.1330 1023 3496 1 chr7B.!!$R2 2473
12 TraesCS7A01G455800 chr7B 616903066 616905520 2454 False 2161.0 2161 82.7060 1018 3494 1 chr7B.!!$F3 2476
13 TraesCS7A01G455800 chr7B 617485804 617488266 2462 False 2158.0 2158 82.6170 1023 3493 1 chr7B.!!$F4 2470
14 TraesCS7A01G455800 chr7B 617554893 617558135 3242 True 2117.5 3775 88.1485 855 4050 2 chr7B.!!$R3 3195
15 TraesCS7A01G455800 chr7B 616836259 616838673 2414 False 2080.0 2080 82.3100 1064 3493 1 chr7B.!!$F2 2429
16 TraesCS7A01G455800 chr7B 720218505 720219160 655 False 1002.0 1002 94.0210 176 844 1 chr7B.!!$F6 668
17 TraesCS7A01G455800 chr7B 20891061 20891709 648 True 970.0 970 93.4030 179 844 1 chr7B.!!$R1 665
18 TraesCS7A01G455800 chr3A 684770517 684771182 665 True 1059.0 1059 95.3520 179 844 1 chr3A.!!$R1 665
19 TraesCS7A01G455800 chr4A 619719768 619720436 668 True 1048.0 1048 94.9250 175 844 1 chr4A.!!$R2 669
20 TraesCS7A01G455800 chr6B 33382598 33383275 677 False 998.0 998 93.5200 179 844 1 chr6B.!!$F1 665
21 TraesCS7A01G455800 chr1B 14567881 14568530 649 False 979.0 979 93.5720 176 844 1 chr1B.!!$F1 668
22 TraesCS7A01G455800 chr6A 17374573 17376692 2119 False 560.0 693 96.8125 176 844 2 chr6A.!!$F1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.106708 TTGATATCAGCGGACAGGGC 59.893 55.000 5.39 0.0 0.00 5.19 F
28 29 0.106708 GATATCAGCGGACAGGGCAA 59.893 55.000 0.00 0.0 0.00 4.52 F
98 99 0.179108 GGTGCACGGTCAGGATAGAC 60.179 60.000 11.45 0.0 37.80 2.59 F
99 100 0.530744 GTGCACGGTCAGGATAGACA 59.469 55.000 0.00 0.0 40.29 3.41 F
1246 2754 0.753262 CCTCGGGATCTGGTACAAGG 59.247 60.000 0.00 0.0 38.70 3.61 F
1785 3309 1.069668 ACCAACCTCTACAACACGACC 59.930 52.381 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 3066 2.125512 CTTGTTCTCCCCGAGCCG 60.126 66.667 0.00 0.00 0.00 5.52 R
2278 3808 1.810030 GGTTGCCGATGTCTCCGTC 60.810 63.158 0.00 0.00 0.00 4.79 R
2290 3820 0.892814 AAGAGCTGCTCAAGGTTGCC 60.893 55.000 29.49 1.72 36.52 4.52 R
2410 3955 0.899720 ATGCCAAAGACAAGCCATGG 59.100 50.000 7.63 7.63 0.00 3.66 R
2494 4039 0.541063 TACACAGCCGGTCTTCTCCA 60.541 55.000 1.90 0.00 0.00 3.86 R
3995 5665 0.039618 AATTGGGCTGTGGGTACTGG 59.960 55.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.759191 GCATGACTTGATATCAGCGGA 58.241 47.619 5.39 0.00 0.00 5.54
21 22 2.478134 GCATGACTTGATATCAGCGGAC 59.522 50.000 5.39 2.50 0.00 4.79
22 23 3.721035 CATGACTTGATATCAGCGGACA 58.279 45.455 5.39 7.55 0.00 4.02
23 24 3.443099 TGACTTGATATCAGCGGACAG 57.557 47.619 5.39 2.02 0.00 3.51
24 25 2.101415 TGACTTGATATCAGCGGACAGG 59.899 50.000 5.39 0.00 0.00 4.00
25 26 1.414181 ACTTGATATCAGCGGACAGGG 59.586 52.381 5.39 0.00 0.00 4.45
26 27 0.106708 TTGATATCAGCGGACAGGGC 59.893 55.000 5.39 0.00 0.00 5.19
27 28 1.048160 TGATATCAGCGGACAGGGCA 61.048 55.000 0.00 0.00 0.00 5.36
28 29 0.106708 GATATCAGCGGACAGGGCAA 59.893 55.000 0.00 0.00 0.00 4.52
29 30 0.546122 ATATCAGCGGACAGGGCAAA 59.454 50.000 0.00 0.00 0.00 3.68
30 31 0.392461 TATCAGCGGACAGGGCAAAC 60.392 55.000 0.00 0.00 0.00 2.93
31 32 2.410322 ATCAGCGGACAGGGCAAACA 62.410 55.000 0.00 0.00 0.00 2.83
32 33 1.973281 CAGCGGACAGGGCAAACAT 60.973 57.895 0.00 0.00 0.00 2.71
33 34 1.973281 AGCGGACAGGGCAAACATG 60.973 57.895 0.00 0.00 36.81 3.21
34 35 2.993471 GCGGACAGGGCAAACATGG 61.993 63.158 0.00 0.00 34.56 3.66
35 36 1.603455 CGGACAGGGCAAACATGGT 60.603 57.895 0.00 0.00 34.56 3.55
36 37 1.865788 CGGACAGGGCAAACATGGTG 61.866 60.000 0.00 0.00 34.56 4.17
37 38 0.827507 GGACAGGGCAAACATGGTGT 60.828 55.000 0.00 0.00 34.56 4.16
38 39 0.598065 GACAGGGCAAACATGGTGTC 59.402 55.000 0.00 0.00 34.56 3.67
39 40 1.172180 ACAGGGCAAACATGGTGTCG 61.172 55.000 0.00 0.00 34.56 4.35
40 41 2.258286 GGGCAAACATGGTGTCGC 59.742 61.111 0.00 0.00 0.00 5.19
41 42 2.258286 GGCAAACATGGTGTCGCC 59.742 61.111 3.56 3.56 37.90 5.54
42 43 2.126888 GCAAACATGGTGTCGCCG 60.127 61.111 0.00 0.00 41.21 6.46
43 44 2.560861 CAAACATGGTGTCGCCGG 59.439 61.111 0.00 0.00 41.21 6.13
44 45 2.671619 AAACATGGTGTCGCCGGG 60.672 61.111 2.18 0.00 41.21 5.73
78 79 2.665603 GGAGGACGAGGCAAGCTT 59.334 61.111 0.00 0.00 0.00 3.74
79 80 1.743252 GGAGGACGAGGCAAGCTTG 60.743 63.158 22.44 22.44 0.00 4.01
80 81 1.743252 GAGGACGAGGCAAGCTTGG 60.743 63.158 27.10 13.18 0.00 3.61
81 82 2.032681 GGACGAGGCAAGCTTGGT 59.967 61.111 27.10 16.33 0.00 3.67
82 83 2.328099 GGACGAGGCAAGCTTGGTG 61.328 63.158 27.10 3.82 0.00 4.17
83 84 2.970974 GACGAGGCAAGCTTGGTGC 61.971 63.158 27.10 14.39 41.45 5.01
84 85 2.979676 CGAGGCAAGCTTGGTGCA 60.980 61.111 27.10 0.00 44.07 4.57
85 86 2.647297 GAGGCAAGCTTGGTGCAC 59.353 61.111 27.10 8.80 44.07 4.57
86 87 3.259425 GAGGCAAGCTTGGTGCACG 62.259 63.158 27.10 0.66 44.07 5.34
87 88 4.347453 GGCAAGCTTGGTGCACGG 62.347 66.667 27.10 4.76 44.07 4.94
88 89 3.595758 GCAAGCTTGGTGCACGGT 61.596 61.111 27.10 0.00 45.94 4.83
89 90 2.639286 CAAGCTTGGTGCACGGTC 59.361 61.111 19.14 0.00 45.94 4.79
90 91 2.186160 CAAGCTTGGTGCACGGTCA 61.186 57.895 19.14 0.00 45.94 4.02
91 92 1.893808 AAGCTTGGTGCACGGTCAG 60.894 57.895 11.45 4.86 45.94 3.51
92 93 3.357079 GCTTGGTGCACGGTCAGG 61.357 66.667 11.45 5.05 42.31 3.86
93 94 2.425592 CTTGGTGCACGGTCAGGA 59.574 61.111 11.45 0.00 0.00 3.86
94 95 1.003355 CTTGGTGCACGGTCAGGAT 60.003 57.895 11.45 0.00 0.00 3.24
95 96 0.249120 CTTGGTGCACGGTCAGGATA 59.751 55.000 11.45 0.00 0.00 2.59
96 97 0.249120 TTGGTGCACGGTCAGGATAG 59.751 55.000 11.45 0.00 0.00 2.08
97 98 0.613572 TGGTGCACGGTCAGGATAGA 60.614 55.000 11.45 0.00 0.00 1.98
98 99 0.179108 GGTGCACGGTCAGGATAGAC 60.179 60.000 11.45 0.00 37.80 2.59
99 100 0.530744 GTGCACGGTCAGGATAGACA 59.469 55.000 0.00 0.00 40.29 3.41
100 101 1.137086 GTGCACGGTCAGGATAGACAT 59.863 52.381 0.00 0.00 40.29 3.06
101 102 1.136891 TGCACGGTCAGGATAGACATG 59.863 52.381 0.00 0.00 40.29 3.21
102 103 1.409064 GCACGGTCAGGATAGACATGA 59.591 52.381 0.00 0.00 40.29 3.07
103 104 2.036475 GCACGGTCAGGATAGACATGAT 59.964 50.000 0.00 0.00 41.30 2.45
104 105 3.858877 GCACGGTCAGGATAGACATGATC 60.859 52.174 0.00 0.00 41.30 2.92
105 106 3.571828 CACGGTCAGGATAGACATGATCT 59.428 47.826 0.00 1.10 41.30 2.75
106 107 4.038522 CACGGTCAGGATAGACATGATCTT 59.961 45.833 0.00 0.00 41.30 2.40
107 108 4.279671 ACGGTCAGGATAGACATGATCTTC 59.720 45.833 0.00 0.48 41.30 2.87
108 109 4.321601 CGGTCAGGATAGACATGATCTTCC 60.322 50.000 0.00 8.54 41.30 3.46
109 110 4.837860 GGTCAGGATAGACATGATCTTCCT 59.162 45.833 0.00 10.36 41.70 3.36
110 111 6.013379 GGTCAGGATAGACATGATCTTCCTA 58.987 44.000 17.70 0.00 40.30 2.94
111 112 6.667414 GGTCAGGATAGACATGATCTTCCTAT 59.333 42.308 17.70 0.00 40.30 2.57
112 113 7.180051 GGTCAGGATAGACATGATCTTCCTATT 59.820 40.741 17.70 5.67 40.30 1.73
113 114 8.592809 GTCAGGATAGACATGATCTTCCTATTT 58.407 37.037 17.70 5.47 40.30 1.40
114 115 8.811017 TCAGGATAGACATGATCTTCCTATTTC 58.189 37.037 17.70 0.00 40.30 2.17
115 116 8.591940 CAGGATAGACATGATCTTCCTATTTCA 58.408 37.037 17.70 0.00 40.30 2.69
116 117 9.336462 AGGATAGACATGATCTTCCTATTTCAT 57.664 33.333 17.20 0.00 40.40 2.57
117 118 9.381033 GGATAGACATGATCTTCCTATTTCATG 57.619 37.037 0.00 9.54 46.88 3.07
124 125 9.662947 CATGATCTTCCTATTTCATGTATAGCA 57.337 33.333 10.32 4.92 40.22 3.49
126 127 9.716531 TGATCTTCCTATTTCATGTATAGCAAG 57.283 33.333 11.72 11.72 28.72 4.01
127 128 7.969536 TCTTCCTATTTCATGTATAGCAAGC 57.030 36.000 12.54 0.00 28.01 4.01
128 129 7.508687 TCTTCCTATTTCATGTATAGCAAGCA 58.491 34.615 12.54 4.43 28.01 3.91
129 130 8.159447 TCTTCCTATTTCATGTATAGCAAGCAT 58.841 33.333 12.54 0.00 28.01 3.79
130 131 9.440773 CTTCCTATTTCATGTATAGCAAGCATA 57.559 33.333 10.32 0.00 0.00 3.14
131 132 9.791801 TTCCTATTTCATGTATAGCAAGCATAA 57.208 29.630 10.32 0.00 0.00 1.90
132 133 9.440773 TCCTATTTCATGTATAGCAAGCATAAG 57.559 33.333 10.32 0.00 0.00 1.73
133 134 9.224267 CCTATTTCATGTATAGCAAGCATAAGT 57.776 33.333 10.32 0.00 0.00 2.24
136 137 8.607441 TTTCATGTATAGCAAGCATAAGTAGG 57.393 34.615 0.00 0.00 0.00 3.18
137 138 6.701340 TCATGTATAGCAAGCATAAGTAGGG 58.299 40.000 0.00 0.00 0.00 3.53
138 139 6.496911 TCATGTATAGCAAGCATAAGTAGGGA 59.503 38.462 0.00 0.00 0.00 4.20
139 140 6.740944 TGTATAGCAAGCATAAGTAGGGAA 57.259 37.500 0.00 0.00 0.00 3.97
140 141 6.759272 TGTATAGCAAGCATAAGTAGGGAAG 58.241 40.000 0.00 0.00 0.00 3.46
141 142 6.553476 TGTATAGCAAGCATAAGTAGGGAAGA 59.447 38.462 0.00 0.00 0.00 2.87
142 143 4.844349 AGCAAGCATAAGTAGGGAAGAA 57.156 40.909 0.00 0.00 0.00 2.52
143 144 4.775236 AGCAAGCATAAGTAGGGAAGAAG 58.225 43.478 0.00 0.00 0.00 2.85
144 145 3.879892 GCAAGCATAAGTAGGGAAGAAGG 59.120 47.826 0.00 0.00 0.00 3.46
145 146 4.626529 GCAAGCATAAGTAGGGAAGAAGGT 60.627 45.833 0.00 0.00 0.00 3.50
146 147 4.762289 AGCATAAGTAGGGAAGAAGGTG 57.238 45.455 0.00 0.00 0.00 4.00
147 148 3.118223 AGCATAAGTAGGGAAGAAGGTGC 60.118 47.826 0.00 0.00 0.00 5.01
148 149 3.370527 GCATAAGTAGGGAAGAAGGTGCA 60.371 47.826 0.00 0.00 0.00 4.57
149 150 4.446371 CATAAGTAGGGAAGAAGGTGCAG 58.554 47.826 0.00 0.00 0.00 4.41
150 151 1.280457 AGTAGGGAAGAAGGTGCAGG 58.720 55.000 0.00 0.00 0.00 4.85
151 152 1.203313 AGTAGGGAAGAAGGTGCAGGA 60.203 52.381 0.00 0.00 0.00 3.86
152 153 1.208293 GTAGGGAAGAAGGTGCAGGAG 59.792 57.143 0.00 0.00 0.00 3.69
153 154 1.377856 GGGAAGAAGGTGCAGGAGC 60.378 63.158 0.00 0.00 42.57 4.70
154 155 1.682257 GGAAGAAGGTGCAGGAGCT 59.318 57.895 0.00 0.00 42.74 4.09
155 156 0.905357 GGAAGAAGGTGCAGGAGCTA 59.095 55.000 0.00 0.00 42.74 3.32
156 157 1.488393 GGAAGAAGGTGCAGGAGCTAT 59.512 52.381 0.00 0.00 42.74 2.97
157 158 2.700897 GGAAGAAGGTGCAGGAGCTATA 59.299 50.000 0.00 0.00 42.74 1.31
158 159 3.244044 GGAAGAAGGTGCAGGAGCTATAG 60.244 52.174 0.00 0.00 42.74 1.31
159 160 3.320610 AGAAGGTGCAGGAGCTATAGA 57.679 47.619 3.21 0.00 42.74 1.98
160 161 3.647636 AGAAGGTGCAGGAGCTATAGAA 58.352 45.455 3.21 0.00 42.74 2.10
161 162 4.033709 AGAAGGTGCAGGAGCTATAGAAA 58.966 43.478 3.21 0.00 42.74 2.52
162 163 4.100808 AGAAGGTGCAGGAGCTATAGAAAG 59.899 45.833 3.21 0.00 42.74 2.62
163 164 2.703007 AGGTGCAGGAGCTATAGAAAGG 59.297 50.000 3.21 0.00 42.74 3.11
164 165 2.700897 GGTGCAGGAGCTATAGAAAGGA 59.299 50.000 3.21 0.00 42.74 3.36
165 166 3.326297 GGTGCAGGAGCTATAGAAAGGAT 59.674 47.826 3.21 0.00 42.74 3.24
166 167 4.562552 GGTGCAGGAGCTATAGAAAGGATC 60.563 50.000 3.21 0.00 42.74 3.36
167 168 4.039730 GTGCAGGAGCTATAGAAAGGATCA 59.960 45.833 3.21 0.00 42.74 2.92
168 169 4.282957 TGCAGGAGCTATAGAAAGGATCAG 59.717 45.833 3.21 0.00 42.74 2.90
169 170 4.322650 GCAGGAGCTATAGAAAGGATCAGG 60.323 50.000 3.21 0.00 37.91 3.86
170 171 4.222588 CAGGAGCTATAGAAAGGATCAGGG 59.777 50.000 3.21 0.00 0.00 4.45
171 172 3.517500 GGAGCTATAGAAAGGATCAGGGG 59.482 52.174 3.21 0.00 0.00 4.79
172 173 4.421131 GAGCTATAGAAAGGATCAGGGGA 58.579 47.826 3.21 0.00 0.00 4.81
173 174 4.832492 AGCTATAGAAAGGATCAGGGGAA 58.168 43.478 3.21 0.00 0.00 3.97
432 437 7.552459 TGTTCATCGGAATCAAGTACTCAATA 58.448 34.615 0.00 0.00 35.05 1.90
477 482 2.093394 GCAAGAGGTAGAAGAAGACCCC 60.093 54.545 0.00 0.00 36.27 4.95
590 2059 1.377725 CATGACTTGCCCCTCGCTT 60.378 57.895 0.00 0.00 38.78 4.68
693 2165 7.198390 TCCTTTTATTCAACGGAGTAGATACG 58.802 38.462 0.00 0.00 45.00 3.06
718 2190 4.487714 AGAACGAGAAATATGGGCTCAA 57.512 40.909 0.00 0.00 0.00 3.02
844 2316 1.963515 AGGCTAGCCCACAAAAACTTG 59.036 47.619 30.42 0.00 36.58 3.16
845 2317 1.960689 GGCTAGCCCACAAAAACTTGA 59.039 47.619 24.19 0.00 0.00 3.02
846 2318 2.562738 GGCTAGCCCACAAAAACTTGAT 59.437 45.455 24.19 0.00 0.00 2.57
847 2319 3.367395 GGCTAGCCCACAAAAACTTGATC 60.367 47.826 24.19 0.00 0.00 2.92
848 2320 3.367395 GCTAGCCCACAAAAACTTGATCC 60.367 47.826 2.29 0.00 0.00 3.36
849 2321 2.676748 AGCCCACAAAAACTTGATCCA 58.323 42.857 0.00 0.00 0.00 3.41
850 2322 2.365293 AGCCCACAAAAACTTGATCCAC 59.635 45.455 0.00 0.00 0.00 4.02
851 2323 2.365293 GCCCACAAAAACTTGATCCACT 59.635 45.455 0.00 0.00 0.00 4.00
852 2324 3.572255 GCCCACAAAAACTTGATCCACTA 59.428 43.478 0.00 0.00 0.00 2.74
853 2325 4.038642 GCCCACAAAAACTTGATCCACTAA 59.961 41.667 0.00 0.00 0.00 2.24
860 2332 5.472301 AAACTTGATCCACTAATCCCCAT 57.528 39.130 0.00 0.00 0.00 4.00
878 2350 3.503748 CCCATTTCTCGCTCTCAAACTTT 59.496 43.478 0.00 0.00 0.00 2.66
890 2362 5.352846 GCTCTCAAACTTTCTATCTGGAACC 59.647 44.000 0.00 0.00 0.00 3.62
897 2369 5.665459 ACTTTCTATCTGGAACCATTCTCG 58.335 41.667 0.00 0.00 0.00 4.04
904 2376 1.001974 TGGAACCATTCTCGTGTCCTG 59.998 52.381 0.00 0.00 0.00 3.86
920 2392 0.978146 CCTGTCTTGACGGAGGGGAT 60.978 60.000 10.85 0.00 0.00 3.85
952 2424 3.245990 GCACAACTTGACCAGAAAAATGC 59.754 43.478 0.00 0.00 0.00 3.56
953 2425 3.486841 CACAACTTGACCAGAAAAATGCG 59.513 43.478 0.00 0.00 0.00 4.73
954 2426 2.422276 ACTTGACCAGAAAAATGCGC 57.578 45.000 0.00 0.00 0.00 6.09
955 2427 1.000274 ACTTGACCAGAAAAATGCGCC 60.000 47.619 4.18 0.00 0.00 6.53
1060 2547 0.942252 CATCACCATGCCACTCATCG 59.058 55.000 0.00 0.00 31.79 3.84
1246 2754 0.753262 CCTCGGGATCTGGTACAAGG 59.247 60.000 0.00 0.00 38.70 3.61
1260 2768 3.728373 AAGGACATCCCCGGCCAC 61.728 66.667 2.24 0.00 36.42 5.01
1429 2937 2.032528 CTTCCTTGTCGCCAGGCA 59.967 61.111 13.30 0.00 0.00 4.75
1593 3110 2.184579 GAGTACCAGGCGCTGACC 59.815 66.667 7.64 0.00 32.44 4.02
1785 3309 1.069668 ACCAACCTCTACAACACGACC 59.930 52.381 0.00 0.00 0.00 4.79
1899 3423 2.738521 CAGTTCGTCTGGGTGCCG 60.739 66.667 3.26 0.00 40.23 5.69
2278 3808 4.410400 GGGGTTGCTCCGTCTGGG 62.410 72.222 0.00 0.00 37.00 4.45
2290 3820 3.920031 TCTGGGACGGAGACATCG 58.080 61.111 0.00 0.00 39.80 3.84
2410 3955 3.422796 GGGAAGAAAGGAGGGAGAAAAC 58.577 50.000 0.00 0.00 0.00 2.43
2482 4027 2.363795 TCGTACTGGCCTGGAGGG 60.364 66.667 14.82 0.44 35.18 4.30
2494 4039 0.695347 CTGGAGGGTTCTTCTTGCCT 59.305 55.000 0.00 0.00 0.00 4.75
2524 4081 1.337728 CGGCTGTGTACATGGAGAACA 60.338 52.381 0.00 0.00 0.00 3.18
2679 4236 3.901797 GACCCAAGTCCAGGTGGCG 62.902 68.421 0.00 0.00 36.17 5.69
2795 4365 1.878656 CTCCTCGGGTTCTGCTCGTT 61.879 60.000 0.00 0.00 42.76 3.85
2910 4480 0.460284 GGTACTGTGTCATGCTCGGG 60.460 60.000 0.00 0.00 0.00 5.14
3090 4660 2.512286 ACGATGCGAGGCACCATG 60.512 61.111 0.00 0.00 43.04 3.66
3155 4725 1.246056 AAGGCGGACGTGTACAGCTA 61.246 55.000 0.00 0.00 0.00 3.32
3295 4871 2.459934 CGCAAAAGGTTGTGAAAGGAC 58.540 47.619 0.00 0.00 46.27 3.85
3423 4999 3.751246 CCAACCATGGCGCAGGTG 61.751 66.667 13.04 7.94 40.58 4.00
3505 5081 2.536365 GCCTCGTCATGTAATTCACGA 58.464 47.619 5.16 5.16 0.00 4.35
3506 5082 2.535984 GCCTCGTCATGTAATTCACGAG 59.464 50.000 19.82 19.82 44.31 4.18
3511 5087 3.000041 GTCATGTAATTCACGAGCCACA 59.000 45.455 0.00 0.00 0.00 4.17
3512 5088 3.435327 GTCATGTAATTCACGAGCCACAA 59.565 43.478 0.00 0.00 0.00 3.33
3515 5091 2.063266 GTAATTCACGAGCCACAACGA 58.937 47.619 0.00 0.00 0.00 3.85
3561 5137 7.413000 CCAAGGACGACATGATTAAGTAGTTTG 60.413 40.741 0.00 0.00 0.00 2.93
3602 5245 2.027561 CGGGGAGTGTCATTTCCTGTTA 60.028 50.000 6.37 0.00 33.85 2.41
3605 5248 4.567747 GGGGAGTGTCATTTCCTGTTACAT 60.568 45.833 6.37 0.00 33.85 2.29
3607 5250 6.177610 GGGAGTGTCATTTCCTGTTACATTA 58.822 40.000 6.37 0.00 33.85 1.90
3608 5251 6.093633 GGGAGTGTCATTTCCTGTTACATTAC 59.906 42.308 6.37 0.00 33.85 1.89
3609 5252 6.653320 GGAGTGTCATTTCCTGTTACATTACA 59.347 38.462 0.00 0.00 0.00 2.41
3610 5253 7.148407 GGAGTGTCATTTCCTGTTACATTACAG 60.148 40.741 0.00 0.00 44.07 2.74
3611 5254 7.224297 AGTGTCATTTCCTGTTACATTACAGT 58.776 34.615 0.00 0.00 43.17 3.55
3612 5255 7.387948 AGTGTCATTTCCTGTTACATTACAGTC 59.612 37.037 0.00 0.00 43.17 3.51
3613 5256 6.367695 TGTCATTTCCTGTTACATTACAGTCG 59.632 38.462 0.00 0.00 43.17 4.18
3618 5261 4.097437 TCCTGTTACATTACAGTCGGCTAG 59.903 45.833 0.00 0.00 43.17 3.42
3621 5264 6.028146 TGTTACATTACAGTCGGCTAGAAA 57.972 37.500 0.00 0.00 0.00 2.52
3636 5279 7.857885 GTCGGCTAGAAATAAATTGGATTTCAG 59.142 37.037 20.21 16.68 43.03 3.02
3652 5295 6.720748 TGGATTTCAGTCAGAATTTTCATCCA 59.279 34.615 4.88 4.88 42.30 3.41
3658 5301 7.223584 TCAGTCAGAATTTTCATCCAGTAACA 58.776 34.615 0.00 0.00 0.00 2.41
3661 5304 7.502226 AGTCAGAATTTTCATCCAGTAACAACA 59.498 33.333 0.00 0.00 0.00 3.33
3675 5318 5.899696 CAGTAACAACATGACACACGTTTAC 59.100 40.000 0.00 0.00 0.00 2.01
3694 5337 7.532091 CGTTTACGTATGTTTGTTTGACAAAG 58.468 34.615 0.00 0.00 40.37 2.77
3705 5348 5.122512 TGTTTGACAAAGAAACAACGGAA 57.877 34.783 0.00 0.00 39.71 4.30
3716 5359 8.427012 CAAAGAAACAACGGAATAATGAATGTG 58.573 33.333 0.00 0.00 0.00 3.21
3719 5362 2.755836 ACGGAATAATGAATGTGCGC 57.244 45.000 0.00 0.00 0.00 6.09
3720 5363 1.003972 ACGGAATAATGAATGTGCGCG 60.004 47.619 0.00 0.00 0.00 6.86
3728 5372 2.067414 TGAATGTGCGCGTGTACTTA 57.933 45.000 17.98 0.00 0.00 2.24
3744 5388 6.286941 GTGTACTTATGTCACGAAACGAAAG 58.713 40.000 0.00 0.00 0.00 2.62
3752 5398 3.952021 GTCACGAAACGAAAGAAAAGACG 59.048 43.478 0.00 0.00 0.00 4.18
3771 5417 9.981114 AAAAGACGGAAATCAAAATAGTTTCAT 57.019 25.926 0.00 0.00 34.40 2.57
3834 5484 5.479375 ACGTTTCAGAGATTTAGGGACTGTA 59.521 40.000 0.00 0.00 41.52 2.74
3861 5511 3.731652 TCAAAAATCAGTTGGGCACAG 57.268 42.857 0.00 0.00 0.00 3.66
3892 5552 8.936864 ACAGCAAATAAGTTATACAGTGACTTC 58.063 33.333 0.00 0.00 37.73 3.01
3907 5567 7.907389 ACAGTGACTTCCAAGTAGAAATCATA 58.093 34.615 0.00 0.00 39.88 2.15
3940 5600 8.941977 ACAAAAAGAAAACATTTAAACTCCACC 58.058 29.630 0.00 0.00 0.00 4.61
3949 5609 5.990996 ACATTTAAACTCCACCATTTTGCTG 59.009 36.000 0.00 0.00 0.00 4.41
3954 5614 1.342174 CTCCACCATTTTGCTGCTGTT 59.658 47.619 0.00 0.00 0.00 3.16
3957 5627 3.577848 TCCACCATTTTGCTGCTGTTATT 59.422 39.130 0.00 0.00 0.00 1.40
3976 5646 1.205820 GGTAGTTGTTGGCGTTCGC 59.794 57.895 8.75 8.75 0.00 4.70
3989 5659 2.480759 GGCGTTCGCATAGAAGGTAGAA 60.481 50.000 18.46 0.00 44.21 2.10
3993 5663 4.181578 GTTCGCATAGAAGGTAGAAAGCA 58.818 43.478 0.00 0.00 39.95 3.91
3995 5665 2.541762 CGCATAGAAGGTAGAAAGCAGC 59.458 50.000 0.00 0.00 0.00 5.25
3998 5668 2.777832 AGAAGGTAGAAAGCAGCCAG 57.222 50.000 0.00 0.00 0.00 4.85
4002 5672 1.555533 AGGTAGAAAGCAGCCAGTACC 59.444 52.381 0.00 0.00 0.00 3.34
4007 5677 0.250901 AAAGCAGCCAGTACCCACAG 60.251 55.000 0.00 0.00 0.00 3.66
4029 5699 3.498082 CCCAATTTACGTTAGCAGTTGC 58.502 45.455 0.00 0.00 42.49 4.17
4041 5711 1.847890 GCAGTTGCTCGGCGGTTTTA 61.848 55.000 7.21 0.00 38.21 1.52
4050 5720 2.669434 CTCGGCGGTTTTAAAATCTCGA 59.331 45.455 18.59 18.59 0.00 4.04
4052 5722 3.062909 TCGGCGGTTTTAAAATCTCGATG 59.937 43.478 16.90 11.44 0.00 3.84
4053 5723 3.181514 CGGCGGTTTTAAAATCTCGATGT 60.182 43.478 18.60 0.00 0.00 3.06
4054 5724 4.033129 CGGCGGTTTTAAAATCTCGATGTA 59.967 41.667 18.60 0.00 0.00 2.29
4055 5725 5.446206 CGGCGGTTTTAAAATCTCGATGTAA 60.446 40.000 18.60 0.00 0.00 2.41
4058 5728 7.019418 GCGGTTTTAAAATCTCGATGTAACTT 58.981 34.615 18.60 0.00 0.00 2.66
4087 5757 6.734104 ATGTTTGAGATGCTTTGTACTCTC 57.266 37.500 0.00 0.00 35.72 3.20
4088 5758 4.686091 TGTTTGAGATGCTTTGTACTCTCG 59.314 41.667 0.00 0.00 37.53 4.04
4089 5759 4.521130 TTGAGATGCTTTGTACTCTCGT 57.479 40.909 0.00 0.00 37.53 4.18
4091 5761 4.237724 TGAGATGCTTTGTACTCTCGTTG 58.762 43.478 0.00 0.00 37.53 4.10
4093 5763 4.883083 AGATGCTTTGTACTCTCGTTGAA 58.117 39.130 0.00 0.00 0.00 2.69
4094 5764 5.482908 AGATGCTTTGTACTCTCGTTGAAT 58.517 37.500 0.00 0.00 0.00 2.57
4095 5765 5.934625 AGATGCTTTGTACTCTCGTTGAATT 59.065 36.000 0.00 0.00 0.00 2.17
4096 5766 6.428159 AGATGCTTTGTACTCTCGTTGAATTT 59.572 34.615 0.00 0.00 0.00 1.82
4097 5767 6.371809 TGCTTTGTACTCTCGTTGAATTTT 57.628 33.333 0.00 0.00 0.00 1.82
4098 5768 6.791303 TGCTTTGTACTCTCGTTGAATTTTT 58.209 32.000 0.00 0.00 0.00 1.94
4100 5770 8.564574 TGCTTTGTACTCTCGTTGAATTTTTAT 58.435 29.630 0.00 0.00 0.00 1.40
4149 5819 8.693542 AAAAATCATTTTAATCTCTCAAGCGG 57.306 30.769 0.00 0.00 36.99 5.52
4150 5820 7.396540 AAATCATTTTAATCTCTCAAGCGGT 57.603 32.000 0.00 0.00 0.00 5.68
4151 5821 5.801350 TCATTTTAATCTCTCAAGCGGTG 57.199 39.130 0.00 0.00 0.00 4.94
4152 5822 5.245531 TCATTTTAATCTCTCAAGCGGTGT 58.754 37.500 0.00 0.00 0.00 4.16
4153 5823 5.705441 TCATTTTAATCTCTCAAGCGGTGTT 59.295 36.000 0.00 0.00 0.00 3.32
4154 5824 6.206634 TCATTTTAATCTCTCAAGCGGTGTTT 59.793 34.615 0.00 0.00 0.00 2.83
4155 5825 6.385649 TTTTAATCTCTCAAGCGGTGTTTT 57.614 33.333 0.00 0.00 0.00 2.43
4156 5826 6.385649 TTTAATCTCTCAAGCGGTGTTTTT 57.614 33.333 0.00 0.00 0.00 1.94
4180 5850 7.532682 TTATTTTGACTTGAACTTTTGTGGC 57.467 32.000 0.00 0.00 0.00 5.01
4181 5851 4.527509 TTTGACTTGAACTTTTGTGGCA 57.472 36.364 0.00 0.00 0.00 4.92
4182 5852 3.781079 TGACTTGAACTTTTGTGGCAG 57.219 42.857 0.00 0.00 0.00 4.85
4183 5853 2.426738 TGACTTGAACTTTTGTGGCAGG 59.573 45.455 0.00 0.00 0.00 4.85
4184 5854 2.427095 GACTTGAACTTTTGTGGCAGGT 59.573 45.455 0.00 0.00 33.12 4.00
4185 5855 3.626930 ACTTGAACTTTTGTGGCAGGTA 58.373 40.909 0.00 0.00 30.32 3.08
4186 5856 3.632145 ACTTGAACTTTTGTGGCAGGTAG 59.368 43.478 0.00 0.00 30.32 3.18
4187 5857 3.569194 TGAACTTTTGTGGCAGGTAGA 57.431 42.857 0.00 0.00 0.00 2.59
4188 5858 4.098914 TGAACTTTTGTGGCAGGTAGAT 57.901 40.909 0.00 0.00 0.00 1.98
4189 5859 5.235850 TGAACTTTTGTGGCAGGTAGATA 57.764 39.130 0.00 0.00 0.00 1.98
4190 5860 5.815581 TGAACTTTTGTGGCAGGTAGATAT 58.184 37.500 0.00 0.00 0.00 1.63
4191 5861 6.953101 TGAACTTTTGTGGCAGGTAGATATA 58.047 36.000 0.00 0.00 0.00 0.86
4192 5862 6.821665 TGAACTTTTGTGGCAGGTAGATATAC 59.178 38.462 0.00 0.00 0.00 1.47
4193 5863 6.308015 ACTTTTGTGGCAGGTAGATATACA 57.692 37.500 0.00 0.00 0.00 2.29
4194 5864 6.900194 ACTTTTGTGGCAGGTAGATATACAT 58.100 36.000 0.00 0.00 0.00 2.29
4195 5865 7.346471 ACTTTTGTGGCAGGTAGATATACATT 58.654 34.615 0.00 0.00 0.00 2.71
4196 5866 7.834181 ACTTTTGTGGCAGGTAGATATACATTT 59.166 33.333 0.00 0.00 0.00 2.32
4197 5867 8.588290 TTTTGTGGCAGGTAGATATACATTTT 57.412 30.769 0.00 0.00 0.00 1.82
4198 5868 7.566760 TTGTGGCAGGTAGATATACATTTTG 57.433 36.000 0.00 0.00 0.00 2.44
4199 5869 6.658849 TGTGGCAGGTAGATATACATTTTGT 58.341 36.000 0.00 0.00 0.00 2.83
4200 5870 6.765989 TGTGGCAGGTAGATATACATTTTGTC 59.234 38.462 0.00 0.00 0.00 3.18
4201 5871 6.992715 GTGGCAGGTAGATATACATTTTGTCT 59.007 38.462 0.00 0.00 0.00 3.41
4202 5872 6.992123 TGGCAGGTAGATATACATTTTGTCTG 59.008 38.462 0.00 0.00 0.00 3.51
4203 5873 6.073003 GGCAGGTAGATATACATTTTGTCTGC 60.073 42.308 11.75 11.75 41.08 4.26
4204 5874 6.346919 GCAGGTAGATATACATTTTGTCTGCG 60.347 42.308 0.00 0.00 34.46 5.18
4205 5875 5.696724 AGGTAGATATACATTTTGTCTGCGC 59.303 40.000 0.00 0.00 0.00 6.09
4206 5876 4.715520 AGATATACATTTTGTCTGCGCG 57.284 40.909 0.00 0.00 0.00 6.86
4207 5877 4.119862 AGATATACATTTTGTCTGCGCGT 58.880 39.130 8.43 0.00 0.00 6.01
4208 5878 4.570772 AGATATACATTTTGTCTGCGCGTT 59.429 37.500 8.43 0.00 0.00 4.84
4219 5889 3.181538 TGTCTGCGCGTTAACTTTTATCG 60.182 43.478 8.43 0.00 0.00 2.92
4236 5906 2.026879 GGCAACTTCGCCGCAAAA 59.973 55.556 0.00 0.00 43.52 2.44
4237 5907 1.590259 GGCAACTTCGCCGCAAAAA 60.590 52.632 0.00 0.00 43.52 1.94
4271 5941 9.853921 GAAATTTTTATCAGCAACTTTTGACTG 57.146 29.630 0.00 0.00 36.67 3.51
4272 5942 7.951530 ATTTTTATCAGCAACTTTTGACTGG 57.048 32.000 9.14 0.00 36.29 4.00
4286 5956 0.108756 GACTGGTAGACGAAGGTGCC 60.109 60.000 0.00 0.00 0.00 5.01
4287 5957 0.830444 ACTGGTAGACGAAGGTGCCA 60.830 55.000 0.00 0.00 0.00 4.92
4308 5978 3.521534 CAAGAATGCTCGGCGAATG 57.478 52.632 12.13 0.48 0.00 2.67
4309 5979 0.729116 CAAGAATGCTCGGCGAATGT 59.271 50.000 12.13 0.00 0.00 2.71
4310 5980 1.009829 AAGAATGCTCGGCGAATGTC 58.990 50.000 12.13 6.25 0.00 3.06
4311 5981 1.148157 AGAATGCTCGGCGAATGTCG 61.148 55.000 12.13 0.00 46.81 4.35
4312 5982 1.421410 GAATGCTCGGCGAATGTCGT 61.421 55.000 12.13 0.00 45.30 4.34
4313 5983 1.421410 AATGCTCGGCGAATGTCGTC 61.421 55.000 12.13 0.00 45.30 4.20
4322 5992 1.126846 GCGAATGTCGTCCTCAAACAG 59.873 52.381 0.00 0.00 42.81 3.16
4351 6021 6.176975 GTTTGACAAACATCGATGGATACA 57.823 37.500 28.09 17.45 46.39 2.29
4396 6066 2.920912 ACCGCCGGTCTCCTCAAA 60.921 61.111 1.02 0.00 0.00 2.69
4421 6093 5.394224 ACCTTTGTTCTGACTAGAGCTAC 57.606 43.478 0.00 0.00 35.42 3.58
4438 6110 2.480224 TACATACCGTAGAGCGCAAC 57.520 50.000 11.47 2.78 39.71 4.17
4439 6111 0.524816 ACATACCGTAGAGCGCAACG 60.525 55.000 19.10 19.10 39.71 4.10
4441 6113 0.248377 ATACCGTAGAGCGCAACGTC 60.248 55.000 22.51 7.62 39.71 4.34
4442 6114 2.257286 TACCGTAGAGCGCAACGTCC 62.257 60.000 22.51 1.37 39.71 4.79
4443 6115 3.238241 CGTAGAGCGCAACGTCCG 61.238 66.667 11.47 0.00 34.48 4.79
4444 6116 2.879462 GTAGAGCGCAACGTCCGG 60.879 66.667 11.47 0.00 0.00 5.14
4445 6117 3.367743 TAGAGCGCAACGTCCGGT 61.368 61.111 11.47 12.14 39.33 5.28
4446 6118 2.039974 TAGAGCGCAACGTCCGGTA 61.040 57.895 11.47 0.00 36.46 4.02
4447 6119 1.985447 TAGAGCGCAACGTCCGGTAG 61.985 60.000 11.47 0.00 36.46 3.18
4450 6122 2.735478 CGCAACGTCCGGTAGCAA 60.735 61.111 0.00 0.00 0.00 3.91
4451 6123 2.726691 CGCAACGTCCGGTAGCAAG 61.727 63.158 0.00 0.00 0.00 4.01
4468 6145 4.377021 AGCAAGACTTTTCACACACGATA 58.623 39.130 0.00 0.00 0.00 2.92
4479 6156 4.377021 TCACACACGATAGCAAGACTTTT 58.623 39.130 0.00 0.00 42.67 2.27
4480 6157 4.447724 TCACACACGATAGCAAGACTTTTC 59.552 41.667 0.00 0.00 42.67 2.29
4481 6158 3.428870 ACACACGATAGCAAGACTTTTCG 59.571 43.478 0.00 5.52 38.24 3.46
4482 6159 3.673338 CACACGATAGCAAGACTTTTCGA 59.327 43.478 11.42 0.00 36.70 3.71
4483 6160 3.921021 ACACGATAGCAAGACTTTTCGAG 59.079 43.478 11.42 7.57 36.70 4.04
4484 6161 4.166523 CACGATAGCAAGACTTTTCGAGA 58.833 43.478 11.42 0.00 36.70 4.04
4485 6162 4.030753 CACGATAGCAAGACTTTTCGAGAC 59.969 45.833 11.42 0.00 36.70 3.36
4486 6163 3.238570 CGATAGCAAGACTTTTCGAGACG 59.761 47.826 0.00 0.00 35.80 4.18
4487 6164 2.795175 AGCAAGACTTTTCGAGACGA 57.205 45.000 0.00 0.00 0.00 4.20
4488 6165 3.305398 AGCAAGACTTTTCGAGACGAT 57.695 42.857 0.00 0.00 35.23 3.73
4489 6166 3.654414 AGCAAGACTTTTCGAGACGATT 58.346 40.909 0.00 0.00 35.23 3.34
4490 6167 4.058817 AGCAAGACTTTTCGAGACGATTT 58.941 39.130 0.00 0.00 35.23 2.17
4493 6170 3.991367 AGACTTTTCGAGACGATTTGGT 58.009 40.909 0.00 0.00 35.23 3.67
4497 6174 4.152402 ACTTTTCGAGACGATTTGGTGATG 59.848 41.667 0.00 0.00 35.23 3.07
4501 6178 2.555199 GAGACGATTTGGTGATGAGGG 58.445 52.381 0.00 0.00 0.00 4.30
4530 6207 0.250295 ACCGGTCCATGTCAACACAG 60.250 55.000 0.00 0.00 35.41 3.66
4548 6225 4.981674 ACACAGGCAACATTTATTCGTTTG 59.018 37.500 0.00 0.00 41.41 2.93
4561 6238 8.625651 CATTTATTCGTTTGGATATGGGTACAA 58.374 33.333 0.00 0.00 0.00 2.41
4587 6267 5.761003 TCTCGTGACGTGATTAAACTAACA 58.239 37.500 4.40 0.00 0.00 2.41
4588 6268 5.854866 TCTCGTGACGTGATTAAACTAACAG 59.145 40.000 4.40 0.00 0.00 3.16
4589 6269 4.383649 TCGTGACGTGATTAAACTAACAGC 59.616 41.667 4.40 0.00 0.00 4.40
4590 6270 4.625135 GTGACGTGATTAAACTAACAGCG 58.375 43.478 0.00 0.00 0.00 5.18
4591 6271 3.676172 TGACGTGATTAAACTAACAGCGG 59.324 43.478 0.00 0.00 0.00 5.52
4592 6272 3.656559 ACGTGATTAAACTAACAGCGGT 58.343 40.909 0.00 0.00 0.00 5.68
4593 6273 3.430895 ACGTGATTAAACTAACAGCGGTG 59.569 43.478 14.13 14.13 0.00 4.94
4594 6274 3.676172 CGTGATTAAACTAACAGCGGTGA 59.324 43.478 23.44 0.00 0.00 4.02
4595 6275 4.433805 CGTGATTAAACTAACAGCGGTGAC 60.434 45.833 23.44 3.05 0.00 3.67
4596 6276 3.998341 TGATTAAACTAACAGCGGTGACC 59.002 43.478 23.44 0.00 0.00 4.02
4609 6289 2.656007 TGACCGTTCGTCACACGC 60.656 61.111 0.00 0.00 46.80 5.34
4610 6290 2.354305 GACCGTTCGTCACACGCT 60.354 61.111 0.00 0.00 42.21 5.07
4611 6291 2.645510 GACCGTTCGTCACACGCTG 61.646 63.158 0.00 0.00 42.21 5.18
4612 6292 4.059459 CCGTTCGTCACACGCTGC 62.059 66.667 0.00 0.00 42.21 5.25
4613 6293 4.059459 CGTTCGTCACACGCTGCC 62.059 66.667 0.00 0.00 42.21 4.85
4614 6294 4.059459 GTTCGTCACACGCTGCCG 62.059 66.667 0.00 0.00 42.21 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.478134 GTCCGCTGATATCAAGTCATGC 59.522 50.000 6.90 4.68 0.00 4.06
1 2 3.721035 TGTCCGCTGATATCAAGTCATG 58.279 45.455 6.90 0.00 0.00 3.07
2 3 3.244009 CCTGTCCGCTGATATCAAGTCAT 60.244 47.826 6.90 0.00 0.00 3.06
3 4 2.101415 CCTGTCCGCTGATATCAAGTCA 59.899 50.000 6.90 2.55 0.00 3.41
4 5 2.546795 CCCTGTCCGCTGATATCAAGTC 60.547 54.545 6.90 0.00 0.00 3.01
6 7 1.875576 GCCCTGTCCGCTGATATCAAG 60.876 57.143 6.90 4.02 0.00 3.02
7 8 0.106708 GCCCTGTCCGCTGATATCAA 59.893 55.000 6.90 0.00 0.00 2.57
8 9 1.048160 TGCCCTGTCCGCTGATATCA 61.048 55.000 5.07 5.07 0.00 2.15
9 10 0.106708 TTGCCCTGTCCGCTGATATC 59.893 55.000 0.00 0.00 0.00 1.63
10 11 0.546122 TTTGCCCTGTCCGCTGATAT 59.454 50.000 0.00 0.00 0.00 1.63
11 12 0.392461 GTTTGCCCTGTCCGCTGATA 60.392 55.000 0.00 0.00 0.00 2.15
12 13 1.675641 GTTTGCCCTGTCCGCTGAT 60.676 57.895 0.00 0.00 0.00 2.90
13 14 2.281484 GTTTGCCCTGTCCGCTGA 60.281 61.111 0.00 0.00 0.00 4.26
14 15 1.973281 ATGTTTGCCCTGTCCGCTG 60.973 57.895 0.00 0.00 0.00 5.18
15 16 1.973281 CATGTTTGCCCTGTCCGCT 60.973 57.895 0.00 0.00 0.00 5.52
16 17 2.568090 CATGTTTGCCCTGTCCGC 59.432 61.111 0.00 0.00 0.00 5.54
17 18 1.603455 ACCATGTTTGCCCTGTCCG 60.603 57.895 0.00 0.00 0.00 4.79
18 19 0.827507 ACACCATGTTTGCCCTGTCC 60.828 55.000 0.00 0.00 0.00 4.02
19 20 0.598065 GACACCATGTTTGCCCTGTC 59.402 55.000 0.00 0.00 0.00 3.51
20 21 1.172180 CGACACCATGTTTGCCCTGT 61.172 55.000 0.00 0.00 0.00 4.00
21 22 1.580942 CGACACCATGTTTGCCCTG 59.419 57.895 0.00 0.00 0.00 4.45
22 23 2.268076 GCGACACCATGTTTGCCCT 61.268 57.895 0.00 0.00 0.00 5.19
23 24 2.258286 GCGACACCATGTTTGCCC 59.742 61.111 0.00 0.00 0.00 5.36
24 25 2.258286 GGCGACACCATGTTTGCC 59.742 61.111 9.50 9.50 42.22 4.52
25 26 2.126888 CGGCGACACCATGTTTGC 60.127 61.111 0.00 0.09 39.03 3.68
26 27 2.560861 CCGGCGACACCATGTTTG 59.439 61.111 9.30 0.00 39.03 2.93
27 28 2.671619 CCCGGCGACACCATGTTT 60.672 61.111 9.30 0.00 39.03 2.83
48 49 4.135153 CCTCCGGAGTCACTGCCG 62.135 72.222 29.25 8.19 46.80 5.69
49 50 2.680352 TCCTCCGGAGTCACTGCC 60.680 66.667 29.25 0.00 0.00 4.85
50 51 2.574399 GTCCTCCGGAGTCACTGC 59.426 66.667 29.25 9.20 29.39 4.40
51 52 1.649390 CTCGTCCTCCGGAGTCACTG 61.649 65.000 29.25 19.02 37.11 3.66
52 53 1.377463 CTCGTCCTCCGGAGTCACT 60.377 63.158 29.25 0.00 37.11 3.41
53 54 2.408241 CCTCGTCCTCCGGAGTCAC 61.408 68.421 29.25 22.63 37.11 3.67
54 55 2.045242 CCTCGTCCTCCGGAGTCA 60.045 66.667 29.25 13.38 37.11 3.41
55 56 3.519930 GCCTCGTCCTCCGGAGTC 61.520 72.222 29.25 19.89 37.11 3.36
56 57 3.881019 TTGCCTCGTCCTCCGGAGT 62.881 63.158 29.25 0.00 37.11 3.85
57 58 3.068691 TTGCCTCGTCCTCCGGAG 61.069 66.667 25.36 25.36 37.11 4.63
58 59 3.068691 CTTGCCTCGTCCTCCGGA 61.069 66.667 2.93 2.93 37.11 5.14
59 60 4.821589 GCTTGCCTCGTCCTCCGG 62.822 72.222 0.00 0.00 37.11 5.14
60 61 3.302347 AAGCTTGCCTCGTCCTCCG 62.302 63.158 0.00 0.00 38.13 4.63
61 62 1.743252 CAAGCTTGCCTCGTCCTCC 60.743 63.158 14.65 0.00 0.00 4.30
62 63 1.743252 CCAAGCTTGCCTCGTCCTC 60.743 63.158 21.43 0.00 0.00 3.71
63 64 2.348998 CCAAGCTTGCCTCGTCCT 59.651 61.111 21.43 0.00 0.00 3.85
64 65 2.032681 ACCAAGCTTGCCTCGTCC 59.967 61.111 21.43 0.00 0.00 4.79
65 66 2.970974 GCACCAAGCTTGCCTCGTC 61.971 63.158 21.43 4.53 41.15 4.20
66 67 2.980233 GCACCAAGCTTGCCTCGT 60.980 61.111 21.43 10.49 41.15 4.18
67 68 2.979676 TGCACCAAGCTTGCCTCG 60.980 61.111 21.43 9.81 45.94 4.63
68 69 2.647297 GTGCACCAAGCTTGCCTC 59.353 61.111 21.43 11.37 45.94 4.70
69 70 3.289834 CGTGCACCAAGCTTGCCT 61.290 61.111 21.43 4.96 45.94 4.75
70 71 4.347453 CCGTGCACCAAGCTTGCC 62.347 66.667 21.43 11.41 45.94 4.52
71 72 3.542629 GACCGTGCACCAAGCTTGC 62.543 63.158 21.43 11.59 45.94 4.01
72 73 2.121564 CTGACCGTGCACCAAGCTTG 62.122 60.000 19.93 19.93 45.94 4.01
73 74 1.893808 CTGACCGTGCACCAAGCTT 60.894 57.895 12.15 0.00 45.94 3.74
74 75 2.281070 CTGACCGTGCACCAAGCT 60.281 61.111 12.15 0.00 45.94 3.74
75 76 3.357079 CCTGACCGTGCACCAAGC 61.357 66.667 12.15 0.00 45.96 4.01
76 77 0.249120 TATCCTGACCGTGCACCAAG 59.751 55.000 12.15 2.71 0.00 3.61
77 78 0.249120 CTATCCTGACCGTGCACCAA 59.751 55.000 12.15 0.00 0.00 3.67
78 79 0.613572 TCTATCCTGACCGTGCACCA 60.614 55.000 12.15 2.38 0.00 4.17
79 80 0.179108 GTCTATCCTGACCGTGCACC 60.179 60.000 12.15 0.00 0.00 5.01
80 81 0.530744 TGTCTATCCTGACCGTGCAC 59.469 55.000 6.82 6.82 36.21 4.57
81 82 1.136891 CATGTCTATCCTGACCGTGCA 59.863 52.381 0.00 0.00 36.21 4.57
82 83 1.409064 TCATGTCTATCCTGACCGTGC 59.591 52.381 0.00 0.00 36.21 5.34
83 84 3.571828 AGATCATGTCTATCCTGACCGTG 59.428 47.826 0.00 0.00 34.69 4.94
84 85 3.838565 AGATCATGTCTATCCTGACCGT 58.161 45.455 0.00 0.00 34.69 4.83
85 86 4.321601 GGAAGATCATGTCTATCCTGACCG 60.322 50.000 0.00 0.00 35.67 4.79
86 87 4.837860 AGGAAGATCATGTCTATCCTGACC 59.162 45.833 17.57 0.00 40.19 4.02
87 88 7.716799 ATAGGAAGATCATGTCTATCCTGAC 57.283 40.000 21.86 0.00 41.01 3.51
88 89 8.733092 AAATAGGAAGATCATGTCTATCCTGA 57.267 34.615 21.86 14.31 41.01 3.86
89 90 8.591940 TGAAATAGGAAGATCATGTCTATCCTG 58.408 37.037 21.86 0.00 41.01 3.86
90 91 8.733092 TGAAATAGGAAGATCATGTCTATCCT 57.267 34.615 19.71 19.71 42.27 3.24
91 92 9.381033 CATGAAATAGGAAGATCATGTCTATCC 57.619 37.037 6.47 5.75 42.53 2.59
105 106 9.791801 TTATGCTTGCTATACATGAAATAGGAA 57.208 29.630 18.29 18.29 35.63 3.36
106 107 9.440773 CTTATGCTTGCTATACATGAAATAGGA 57.559 33.333 16.39 12.89 0.00 2.94
107 108 9.224267 ACTTATGCTTGCTATACATGAAATAGG 57.776 33.333 16.39 6.28 0.00 2.57
110 111 9.224267 CCTACTTATGCTTGCTATACATGAAAT 57.776 33.333 0.00 0.00 0.00 2.17
111 112 7.661437 CCCTACTTATGCTTGCTATACATGAAA 59.339 37.037 0.00 0.00 0.00 2.69
112 113 7.016170 TCCCTACTTATGCTTGCTATACATGAA 59.984 37.037 0.00 0.00 0.00 2.57
113 114 6.496911 TCCCTACTTATGCTTGCTATACATGA 59.503 38.462 0.00 0.00 0.00 3.07
114 115 6.701340 TCCCTACTTATGCTTGCTATACATG 58.299 40.000 0.00 0.00 0.00 3.21
115 116 6.935240 TCCCTACTTATGCTTGCTATACAT 57.065 37.500 0.00 0.00 0.00 2.29
116 117 6.553476 TCTTCCCTACTTATGCTTGCTATACA 59.447 38.462 0.00 0.00 0.00 2.29
117 118 6.994221 TCTTCCCTACTTATGCTTGCTATAC 58.006 40.000 0.00 0.00 0.00 1.47
118 119 7.256332 CCTTCTTCCCTACTTATGCTTGCTATA 60.256 40.741 0.00 0.00 0.00 1.31
119 120 6.465035 CCTTCTTCCCTACTTATGCTTGCTAT 60.465 42.308 0.00 0.00 0.00 2.97
120 121 5.163301 CCTTCTTCCCTACTTATGCTTGCTA 60.163 44.000 0.00 0.00 0.00 3.49
121 122 4.384647 CCTTCTTCCCTACTTATGCTTGCT 60.385 45.833 0.00 0.00 0.00 3.91
122 123 3.879892 CCTTCTTCCCTACTTATGCTTGC 59.120 47.826 0.00 0.00 0.00 4.01
123 124 4.878397 CACCTTCTTCCCTACTTATGCTTG 59.122 45.833 0.00 0.00 0.00 4.01
124 125 4.626529 GCACCTTCTTCCCTACTTATGCTT 60.627 45.833 0.00 0.00 0.00 3.91
125 126 3.118223 GCACCTTCTTCCCTACTTATGCT 60.118 47.826 0.00 0.00 0.00 3.79
126 127 3.206964 GCACCTTCTTCCCTACTTATGC 58.793 50.000 0.00 0.00 0.00 3.14
127 128 4.446371 CTGCACCTTCTTCCCTACTTATG 58.554 47.826 0.00 0.00 0.00 1.90
128 129 3.456277 CCTGCACCTTCTTCCCTACTTAT 59.544 47.826 0.00 0.00 0.00 1.73
129 130 2.838202 CCTGCACCTTCTTCCCTACTTA 59.162 50.000 0.00 0.00 0.00 2.24
130 131 1.630878 CCTGCACCTTCTTCCCTACTT 59.369 52.381 0.00 0.00 0.00 2.24
131 132 1.203313 TCCTGCACCTTCTTCCCTACT 60.203 52.381 0.00 0.00 0.00 2.57
132 133 1.208293 CTCCTGCACCTTCTTCCCTAC 59.792 57.143 0.00 0.00 0.00 3.18
133 134 1.573108 CTCCTGCACCTTCTTCCCTA 58.427 55.000 0.00 0.00 0.00 3.53
134 135 1.846712 GCTCCTGCACCTTCTTCCCT 61.847 60.000 0.00 0.00 39.41 4.20
135 136 1.377856 GCTCCTGCACCTTCTTCCC 60.378 63.158 0.00 0.00 39.41 3.97
136 137 0.905357 TAGCTCCTGCACCTTCTTCC 59.095 55.000 0.00 0.00 42.74 3.46
137 138 2.998316 ATAGCTCCTGCACCTTCTTC 57.002 50.000 0.00 0.00 42.74 2.87
138 139 3.647636 TCTATAGCTCCTGCACCTTCTT 58.352 45.455 0.00 0.00 42.74 2.52
139 140 3.320610 TCTATAGCTCCTGCACCTTCT 57.679 47.619 0.00 0.00 42.74 2.85
140 141 4.376146 CTTTCTATAGCTCCTGCACCTTC 58.624 47.826 0.00 0.00 42.74 3.46
141 142 3.135530 CCTTTCTATAGCTCCTGCACCTT 59.864 47.826 0.00 0.00 42.74 3.50
142 143 2.703007 CCTTTCTATAGCTCCTGCACCT 59.297 50.000 0.00 0.00 42.74 4.00
143 144 2.700897 TCCTTTCTATAGCTCCTGCACC 59.299 50.000 0.00 0.00 42.74 5.01
144 145 4.039730 TGATCCTTTCTATAGCTCCTGCAC 59.960 45.833 0.00 0.00 42.74 4.57
145 146 4.226384 TGATCCTTTCTATAGCTCCTGCA 58.774 43.478 0.00 0.00 42.74 4.41
146 147 4.322650 CCTGATCCTTTCTATAGCTCCTGC 60.323 50.000 0.00 0.00 40.05 4.85
147 148 4.222588 CCCTGATCCTTTCTATAGCTCCTG 59.777 50.000 0.00 0.00 0.00 3.86
148 149 4.424842 CCCTGATCCTTTCTATAGCTCCT 58.575 47.826 0.00 0.00 0.00 3.69
149 150 3.517500 CCCCTGATCCTTTCTATAGCTCC 59.482 52.174 0.00 0.00 0.00 4.70
150 151 4.421131 TCCCCTGATCCTTTCTATAGCTC 58.579 47.826 0.00 0.00 0.00 4.09
151 152 4.493819 TCCCCTGATCCTTTCTATAGCT 57.506 45.455 0.00 0.00 0.00 3.32
152 153 4.019771 CCTTCCCCTGATCCTTTCTATAGC 60.020 50.000 0.00 0.00 0.00 2.97
153 154 5.407049 TCCTTCCCCTGATCCTTTCTATAG 58.593 45.833 0.00 0.00 0.00 1.31
154 155 5.434003 TCCTTCCCCTGATCCTTTCTATA 57.566 43.478 0.00 0.00 0.00 1.31
155 156 4.302004 TCCTTCCCCTGATCCTTTCTAT 57.698 45.455 0.00 0.00 0.00 1.98
156 157 3.795755 TCCTTCCCCTGATCCTTTCTA 57.204 47.619 0.00 0.00 0.00 2.10
157 158 2.668850 TCCTTCCCCTGATCCTTTCT 57.331 50.000 0.00 0.00 0.00 2.52
158 159 3.203040 TGAATCCTTCCCCTGATCCTTTC 59.797 47.826 0.00 0.00 0.00 2.62
159 160 3.201363 TGAATCCTTCCCCTGATCCTTT 58.799 45.455 0.00 0.00 0.00 3.11
160 161 2.782341 CTGAATCCTTCCCCTGATCCTT 59.218 50.000 0.00 0.00 0.00 3.36
161 162 2.021639 TCTGAATCCTTCCCCTGATCCT 60.022 50.000 0.00 0.00 0.00 3.24
162 163 2.105649 GTCTGAATCCTTCCCCTGATCC 59.894 54.545 0.00 0.00 0.00 3.36
163 164 3.044894 AGTCTGAATCCTTCCCCTGATC 58.955 50.000 0.00 0.00 0.00 2.92
164 165 2.776536 CAGTCTGAATCCTTCCCCTGAT 59.223 50.000 0.00 0.00 0.00 2.90
165 166 2.191400 CAGTCTGAATCCTTCCCCTGA 58.809 52.381 0.00 0.00 0.00 3.86
166 167 1.211457 CCAGTCTGAATCCTTCCCCTG 59.789 57.143 0.00 0.00 0.00 4.45
167 168 1.081174 TCCAGTCTGAATCCTTCCCCT 59.919 52.381 0.00 0.00 0.00 4.79
168 169 1.210722 GTCCAGTCTGAATCCTTCCCC 59.789 57.143 0.00 0.00 0.00 4.81
169 170 1.134670 CGTCCAGTCTGAATCCTTCCC 60.135 57.143 0.00 0.00 0.00 3.97
170 171 1.134670 CCGTCCAGTCTGAATCCTTCC 60.135 57.143 0.00 0.00 0.00 3.46
171 172 1.825474 TCCGTCCAGTCTGAATCCTTC 59.175 52.381 0.00 0.00 0.00 3.46
172 173 1.827969 CTCCGTCCAGTCTGAATCCTT 59.172 52.381 0.00 0.00 0.00 3.36
173 174 1.479709 CTCCGTCCAGTCTGAATCCT 58.520 55.000 0.00 0.00 0.00 3.24
406 411 5.789521 TGAGTACTTGATTCCGATGAACAA 58.210 37.500 0.00 0.00 32.13 2.83
432 437 3.480470 CTGTCCCTGTGTCAATTGACTT 58.520 45.455 32.57 0.00 44.99 3.01
477 482 0.179156 AAAAAGGCAGCGCATGATCG 60.179 50.000 11.47 0.00 0.00 3.69
565 571 0.971959 GGGGCAAGTCATGAATGGCA 60.972 55.000 23.05 0.00 41.02 4.92
590 2059 4.248058 GCTACTAGTAAAAGGAAACGGCA 58.752 43.478 3.76 0.00 0.00 5.69
642 2111 3.004002 GGAAACGGTAGAAAACAACCCAG 59.996 47.826 0.00 0.00 31.68 4.45
693 2165 4.200092 AGCCCATATTTCTCGTTCTTTCC 58.800 43.478 0.00 0.00 0.00 3.13
844 2316 4.319177 CGAGAAATGGGGATTAGTGGATC 58.681 47.826 0.00 0.00 0.00 3.36
845 2317 3.496870 GCGAGAAATGGGGATTAGTGGAT 60.497 47.826 0.00 0.00 0.00 3.41
846 2318 2.158813 GCGAGAAATGGGGATTAGTGGA 60.159 50.000 0.00 0.00 0.00 4.02
847 2319 2.158755 AGCGAGAAATGGGGATTAGTGG 60.159 50.000 0.00 0.00 0.00 4.00
848 2320 3.134458 GAGCGAGAAATGGGGATTAGTG 58.866 50.000 0.00 0.00 0.00 2.74
849 2321 3.041946 AGAGCGAGAAATGGGGATTAGT 58.958 45.455 0.00 0.00 0.00 2.24
850 2322 3.070159 TGAGAGCGAGAAATGGGGATTAG 59.930 47.826 0.00 0.00 0.00 1.73
851 2323 3.038280 TGAGAGCGAGAAATGGGGATTA 58.962 45.455 0.00 0.00 0.00 1.75
852 2324 1.839994 TGAGAGCGAGAAATGGGGATT 59.160 47.619 0.00 0.00 0.00 3.01
853 2325 1.500474 TGAGAGCGAGAAATGGGGAT 58.500 50.000 0.00 0.00 0.00 3.85
860 2332 6.587990 CAGATAGAAAGTTTGAGAGCGAGAAA 59.412 38.462 0.00 0.00 0.00 2.52
878 2350 4.023980 ACACGAGAATGGTTCCAGATAGA 58.976 43.478 0.00 0.00 0.00 1.98
890 2362 2.989840 GTCAAGACAGGACACGAGAATG 59.010 50.000 0.00 0.00 35.36 2.67
897 2369 0.038159 CCTCCGTCAAGACAGGACAC 60.038 60.000 8.87 0.00 34.97 3.67
904 2376 1.153349 GCATCCCCTCCGTCAAGAC 60.153 63.158 0.00 0.00 0.00 3.01
955 2427 4.864334 GATGACCCCGGCAGGCAG 62.864 72.222 4.43 0.00 35.76 4.85
1246 2754 4.796495 GGTGTGGCCGGGGATGTC 62.796 72.222 2.18 0.00 0.00 3.06
1260 2768 4.415332 CCGACCCAGACGACGGTG 62.415 72.222 0.00 0.00 40.42 4.94
1429 2937 2.430382 ATCTCCGCCGTGTTGTTCGT 62.430 55.000 0.00 0.00 0.00 3.85
1453 2970 2.551912 GGACCAGGTTGCCGTTGTG 61.552 63.158 0.00 0.00 0.00 3.33
1549 3066 2.125512 CTTGTTCTCCCCGAGCCG 60.126 66.667 0.00 0.00 0.00 5.52
2278 3808 1.810030 GGTTGCCGATGTCTCCGTC 60.810 63.158 0.00 0.00 0.00 4.79
2290 3820 0.892814 AAGAGCTGCTCAAGGTTGCC 60.893 55.000 29.49 1.72 36.52 4.52
2410 3955 0.899720 ATGCCAAAGACAAGCCATGG 59.100 50.000 7.63 7.63 0.00 3.66
2467 4012 0.910088 AGAACCCTCCAGGCCAGTAC 60.910 60.000 5.01 0.00 40.58 2.73
2494 4039 0.541063 TACACAGCCGGTCTTCTCCA 60.541 55.000 1.90 0.00 0.00 3.86
2504 4052 1.337728 TGTTCTCCATGTACACAGCCG 60.338 52.381 0.00 0.00 0.00 5.52
2679 4236 1.899142 AGACTCTCCAGCTTCTTCACC 59.101 52.381 0.00 0.00 0.00 4.02
2795 4365 2.184322 GCATCTTCTCGTCGCCCA 59.816 61.111 0.00 0.00 0.00 5.36
2919 4489 3.009115 TGCAGGTAGGTCAGCCCC 61.009 66.667 0.00 0.00 34.57 5.80
3155 4725 1.603842 TCGAAGAGCACCATGCCAT 59.396 52.632 0.00 0.00 46.52 4.40
3225 4798 2.732619 CCTCGCCCCAGTCCCTAAC 61.733 68.421 0.00 0.00 0.00 2.34
3226 4799 2.365105 CCTCGCCCCAGTCCCTAA 60.365 66.667 0.00 0.00 0.00 2.69
3227 4800 4.475444 CCCTCGCCCCAGTCCCTA 62.475 72.222 0.00 0.00 0.00 3.53
3277 4853 3.447229 ACCTGTCCTTTCACAACCTTTTG 59.553 43.478 0.00 0.00 38.83 2.44
3505 5081 2.586635 TTTCGCGTCGTTGTGGCT 60.587 55.556 5.77 0.00 0.00 4.75
3506 5082 2.127758 CTTTCGCGTCGTTGTGGC 60.128 61.111 5.77 0.00 0.00 5.01
3561 5137 0.822121 AAAGAAAGACCCGCCACACC 60.822 55.000 0.00 0.00 0.00 4.16
3602 5245 8.612619 CAATTTATTTCTAGCCGACTGTAATGT 58.387 33.333 0.00 0.00 0.00 2.71
3605 5248 7.332557 TCCAATTTATTTCTAGCCGACTGTAA 58.667 34.615 0.00 0.00 0.00 2.41
3607 5250 5.741011 TCCAATTTATTTCTAGCCGACTGT 58.259 37.500 0.00 0.00 0.00 3.55
3608 5251 6.867662 ATCCAATTTATTTCTAGCCGACTG 57.132 37.500 0.00 0.00 0.00 3.51
3609 5252 7.556275 TGAAATCCAATTTATTTCTAGCCGACT 59.444 33.333 17.64 0.00 41.72 4.18
3610 5253 7.703328 TGAAATCCAATTTATTTCTAGCCGAC 58.297 34.615 17.64 0.00 41.72 4.79
3611 5254 7.556275 ACTGAAATCCAATTTATTTCTAGCCGA 59.444 33.333 17.64 3.28 41.72 5.54
3612 5255 7.707104 ACTGAAATCCAATTTATTTCTAGCCG 58.293 34.615 17.64 8.48 41.72 5.52
3613 5256 8.686334 TGACTGAAATCCAATTTATTTCTAGCC 58.314 33.333 17.64 10.34 41.72 3.93
3636 5279 7.648142 TGTTGTTACTGGATGAAAATTCTGAC 58.352 34.615 0.00 0.00 0.00 3.51
3652 5295 5.276489 CGTAAACGTGTGTCATGTTGTTACT 60.276 40.000 7.89 0.00 41.92 2.24
3675 5318 7.499438 TGTTTCTTTGTCAAACAAACATACG 57.501 32.000 21.08 0.00 42.55 3.06
3686 5329 7.708051 TCATTATTCCGTTGTTTCTTTGTCAA 58.292 30.769 0.00 0.00 0.00 3.18
3690 5333 8.427012 CACATTCATTATTCCGTTGTTTCTTTG 58.573 33.333 0.00 0.00 0.00 2.77
3694 5337 5.003402 CGCACATTCATTATTCCGTTGTTTC 59.997 40.000 0.00 0.00 0.00 2.78
3705 5348 3.194861 AGTACACGCGCACATTCATTAT 58.805 40.909 5.73 0.00 0.00 1.28
3720 5363 5.811018 TTCGTTTCGTGACATAAGTACAC 57.189 39.130 0.00 0.00 0.00 2.90
3728 5372 5.499047 GTCTTTTCTTTCGTTTCGTGACAT 58.501 37.500 0.00 0.00 0.00 3.06
3737 5381 5.744666 TGATTTCCGTCTTTTCTTTCGTT 57.255 34.783 0.00 0.00 0.00 3.85
3740 5384 9.678941 ACTATTTTGATTTCCGTCTTTTCTTTC 57.321 29.630 0.00 0.00 0.00 2.62
3744 5388 9.458374 TGAAACTATTTTGATTTCCGTCTTTTC 57.542 29.630 0.00 0.00 32.44 2.29
3785 5431 5.382303 CAGGTTTAGTGCATTTGTTACTCG 58.618 41.667 0.00 0.00 0.00 4.18
3787 5433 5.240844 GTCCAGGTTTAGTGCATTTGTTACT 59.759 40.000 0.00 0.00 0.00 2.24
3788 5434 5.458015 GTCCAGGTTTAGTGCATTTGTTAC 58.542 41.667 0.00 0.00 0.00 2.50
3789 5435 4.214545 CGTCCAGGTTTAGTGCATTTGTTA 59.785 41.667 0.00 0.00 0.00 2.41
3790 5436 3.004315 CGTCCAGGTTTAGTGCATTTGTT 59.996 43.478 0.00 0.00 0.00 2.83
3791 5437 2.552315 CGTCCAGGTTTAGTGCATTTGT 59.448 45.455 0.00 0.00 0.00 2.83
3792 5438 2.552315 ACGTCCAGGTTTAGTGCATTTG 59.448 45.455 0.00 0.00 0.00 2.32
3861 5511 6.128007 ACTGTATAACTTATTTGCTGTGGTGC 60.128 38.462 0.00 0.00 0.00 5.01
3921 5581 7.855409 GCAAAATGGTGGAGTTTAAATGTTTTC 59.145 33.333 0.00 0.00 0.00 2.29
3924 5584 6.482973 CAGCAAAATGGTGGAGTTTAAATGTT 59.517 34.615 1.73 0.00 41.77 2.71
3926 5586 5.106987 GCAGCAAAATGGTGGAGTTTAAATG 60.107 40.000 11.07 0.00 45.26 2.32
3927 5587 4.996758 GCAGCAAAATGGTGGAGTTTAAAT 59.003 37.500 11.07 0.00 45.26 1.40
3928 5588 4.100808 AGCAGCAAAATGGTGGAGTTTAAA 59.899 37.500 11.07 0.00 45.26 1.52
3940 5600 5.713025 ACTACCAATAACAGCAGCAAAATG 58.287 37.500 0.00 0.00 0.00 2.32
3949 5609 3.669557 CGCCAACAACTACCAATAACAGC 60.670 47.826 0.00 0.00 0.00 4.40
3954 5614 2.737783 CGAACGCCAACAACTACCAATA 59.262 45.455 0.00 0.00 0.00 1.90
3957 5627 1.500512 GCGAACGCCAACAACTACCA 61.501 55.000 8.03 0.00 34.56 3.25
3976 5646 4.125703 CTGGCTGCTTTCTACCTTCTATG 58.874 47.826 0.00 0.00 0.00 2.23
3989 5659 1.376466 CTGTGGGTACTGGCTGCTT 59.624 57.895 0.00 0.00 0.00 3.91
3993 5663 3.330720 GGGCTGTGGGTACTGGCT 61.331 66.667 9.86 0.00 46.19 4.75
3995 5665 0.039618 AATTGGGCTGTGGGTACTGG 59.960 55.000 0.00 0.00 0.00 4.00
3998 5668 1.741145 CGTAAATTGGGCTGTGGGTAC 59.259 52.381 0.00 0.00 0.00 3.34
4002 5672 2.159435 GCTAACGTAAATTGGGCTGTGG 60.159 50.000 0.00 0.00 0.00 4.17
4007 5677 3.498082 CAACTGCTAACGTAAATTGGGC 58.502 45.455 0.00 0.00 0.00 5.36
4029 5699 2.669434 TCGAGATTTTAAAACCGCCGAG 59.331 45.455 1.97 0.00 0.00 4.63
4034 5704 8.944212 AAAGTTACATCGAGATTTTAAAACCG 57.056 30.769 1.97 7.68 0.00 4.44
4061 5731 8.798859 AGAGTACAAAGCATCTCAAACATAAT 57.201 30.769 0.00 0.00 0.00 1.28
4062 5732 7.063426 CGAGAGTACAAAGCATCTCAAACATAA 59.937 37.037 7.94 0.00 38.46 1.90
4065 5735 4.686091 CGAGAGTACAAAGCATCTCAAACA 59.314 41.667 7.94 0.00 38.46 2.83
4066 5736 4.686554 ACGAGAGTACAAAGCATCTCAAAC 59.313 41.667 7.94 0.00 46.88 2.93
4068 5738 4.521130 ACGAGAGTACAAAGCATCTCAA 57.479 40.909 7.94 0.00 46.88 3.02
4124 5794 8.306761 ACCGCTTGAGAGATTAAAATGATTTTT 58.693 29.630 8.60 0.00 38.56 1.94
4125 5795 7.756722 CACCGCTTGAGAGATTAAAATGATTTT 59.243 33.333 8.35 8.35 36.67 1.82
4127 5797 6.375455 ACACCGCTTGAGAGATTAAAATGATT 59.625 34.615 0.00 0.00 0.00 2.57
4129 5799 5.245531 ACACCGCTTGAGAGATTAAAATGA 58.754 37.500 0.00 0.00 0.00 2.57
4130 5800 5.551760 ACACCGCTTGAGAGATTAAAATG 57.448 39.130 0.00 0.00 0.00 2.32
4131 5801 6.575162 AAACACCGCTTGAGAGATTAAAAT 57.425 33.333 0.00 0.00 0.00 1.82
4132 5802 6.385649 AAAACACCGCTTGAGAGATTAAAA 57.614 33.333 0.00 0.00 0.00 1.52
4133 5803 6.385649 AAAAACACCGCTTGAGAGATTAAA 57.614 33.333 0.00 0.00 0.00 1.52
4154 5824 8.447053 GCCACAAAAGTTCAAGTCAAAATAAAA 58.553 29.630 0.00 0.00 0.00 1.52
4155 5825 7.604164 TGCCACAAAAGTTCAAGTCAAAATAAA 59.396 29.630 0.00 0.00 0.00 1.40
4156 5826 7.099764 TGCCACAAAAGTTCAAGTCAAAATAA 58.900 30.769 0.00 0.00 0.00 1.40
4157 5827 6.634805 TGCCACAAAAGTTCAAGTCAAAATA 58.365 32.000 0.00 0.00 0.00 1.40
4159 5829 4.887748 TGCCACAAAAGTTCAAGTCAAAA 58.112 34.783 0.00 0.00 0.00 2.44
4162 5832 2.426738 CCTGCCACAAAAGTTCAAGTCA 59.573 45.455 0.00 0.00 0.00 3.41
4163 5833 2.427095 ACCTGCCACAAAAGTTCAAGTC 59.573 45.455 0.00 0.00 0.00 3.01
4165 5835 3.882888 TCTACCTGCCACAAAAGTTCAAG 59.117 43.478 0.00 0.00 0.00 3.02
4168 5838 6.821665 TGTATATCTACCTGCCACAAAAGTTC 59.178 38.462 0.00 0.00 0.00 3.01
4171 5841 7.807977 AATGTATATCTACCTGCCACAAAAG 57.192 36.000 0.00 0.00 0.00 2.27
4172 5842 8.465999 CAAAATGTATATCTACCTGCCACAAAA 58.534 33.333 0.00 0.00 0.00 2.44
4173 5843 7.613801 ACAAAATGTATATCTACCTGCCACAAA 59.386 33.333 0.00 0.00 0.00 2.83
4174 5844 7.116075 ACAAAATGTATATCTACCTGCCACAA 58.884 34.615 0.00 0.00 0.00 3.33
4175 5845 6.658849 ACAAAATGTATATCTACCTGCCACA 58.341 36.000 0.00 0.00 0.00 4.17
4176 5846 6.992715 AGACAAAATGTATATCTACCTGCCAC 59.007 38.462 0.00 0.00 0.00 5.01
4177 5847 6.992123 CAGACAAAATGTATATCTACCTGCCA 59.008 38.462 0.00 0.00 0.00 4.92
4178 5848 6.073003 GCAGACAAAATGTATATCTACCTGCC 60.073 42.308 0.00 0.00 36.94 4.85
4179 5849 6.346919 CGCAGACAAAATGTATATCTACCTGC 60.347 42.308 0.00 0.00 38.82 4.85
4180 5850 6.346919 GCGCAGACAAAATGTATATCTACCTG 60.347 42.308 0.30 0.00 0.00 4.00
4181 5851 5.696724 GCGCAGACAAAATGTATATCTACCT 59.303 40.000 0.30 0.00 0.00 3.08
4182 5852 5.388475 CGCGCAGACAAAATGTATATCTACC 60.388 44.000 8.75 0.00 0.00 3.18
4183 5853 5.175126 ACGCGCAGACAAAATGTATATCTAC 59.825 40.000 5.73 0.00 0.00 2.59
4184 5854 5.286438 ACGCGCAGACAAAATGTATATCTA 58.714 37.500 5.73 0.00 0.00 1.98
4185 5855 4.119862 ACGCGCAGACAAAATGTATATCT 58.880 39.130 5.73 0.00 0.00 1.98
4186 5856 4.452890 ACGCGCAGACAAAATGTATATC 57.547 40.909 5.73 0.00 0.00 1.63
4187 5857 4.875544 AACGCGCAGACAAAATGTATAT 57.124 36.364 5.73 0.00 0.00 0.86
4188 5858 5.349270 AGTTAACGCGCAGACAAAATGTATA 59.651 36.000 5.73 0.00 0.00 1.47
4189 5859 4.153475 AGTTAACGCGCAGACAAAATGTAT 59.847 37.500 5.73 0.00 0.00 2.29
4190 5860 3.495377 AGTTAACGCGCAGACAAAATGTA 59.505 39.130 5.73 0.00 0.00 2.29
4191 5861 2.289547 AGTTAACGCGCAGACAAAATGT 59.710 40.909 5.73 0.00 0.00 2.71
4192 5862 2.916111 AGTTAACGCGCAGACAAAATG 58.084 42.857 5.73 0.00 0.00 2.32
4193 5863 3.619233 AAGTTAACGCGCAGACAAAAT 57.381 38.095 5.73 0.00 0.00 1.82
4194 5864 3.408288 AAAGTTAACGCGCAGACAAAA 57.592 38.095 5.73 0.00 0.00 2.44
4195 5865 3.408288 AAAAGTTAACGCGCAGACAAA 57.592 38.095 5.73 0.00 0.00 2.83
4196 5866 4.664640 CGATAAAAGTTAACGCGCAGACAA 60.665 41.667 5.73 0.00 0.00 3.18
4197 5867 3.181538 CGATAAAAGTTAACGCGCAGACA 60.182 43.478 5.73 0.00 0.00 3.41
4198 5868 3.331178 CGATAAAAGTTAACGCGCAGAC 58.669 45.455 5.73 1.44 0.00 3.51
4199 5869 2.346244 CCGATAAAAGTTAACGCGCAGA 59.654 45.455 5.73 0.00 0.00 4.26
4200 5870 2.689635 CCGATAAAAGTTAACGCGCAG 58.310 47.619 5.73 2.42 0.00 5.18
4201 5871 1.201943 GCCGATAAAAGTTAACGCGCA 60.202 47.619 5.73 0.00 0.00 6.09
4202 5872 1.201943 TGCCGATAAAAGTTAACGCGC 60.202 47.619 5.73 0.00 0.00 6.86
4203 5873 2.791417 TGCCGATAAAAGTTAACGCG 57.209 45.000 3.53 3.53 0.00 6.01
4204 5874 4.074466 AGTTGCCGATAAAAGTTAACGC 57.926 40.909 0.00 0.00 0.00 4.84
4205 5875 4.779523 CGAAGTTGCCGATAAAAGTTAACG 59.220 41.667 0.00 0.00 0.00 3.18
4206 5876 4.552276 GCGAAGTTGCCGATAAAAGTTAAC 59.448 41.667 0.00 0.00 0.00 2.01
4207 5877 4.378666 GGCGAAGTTGCCGATAAAAGTTAA 60.379 41.667 0.00 0.00 46.75 2.01
4208 5878 3.125658 GGCGAAGTTGCCGATAAAAGTTA 59.874 43.478 0.00 0.00 46.75 2.24
4245 5915 9.853921 CAGTCAAAAGTTGCTGATAAAAATTTC 57.146 29.630 0.00 0.00 37.13 2.17
4249 5919 6.872920 ACCAGTCAAAAGTTGCTGATAAAAA 58.127 32.000 11.49 0.00 37.13 1.94
4268 5938 0.830444 TGGCACCTTCGTCTACCAGT 60.830 55.000 0.00 0.00 0.00 4.00
4271 5941 1.019805 GCTTGGCACCTTCGTCTACC 61.020 60.000 0.00 0.00 0.00 3.18
4272 5942 0.320421 TGCTTGGCACCTTCGTCTAC 60.320 55.000 0.00 0.00 31.71 2.59
4301 5971 0.442699 GTTTGAGGACGACATTCGCC 59.557 55.000 0.00 0.00 45.12 5.54
4302 5972 1.126846 CTGTTTGAGGACGACATTCGC 59.873 52.381 0.00 0.00 45.12 4.70
4303 5973 1.126846 GCTGTTTGAGGACGACATTCG 59.873 52.381 0.00 0.00 46.93 3.34
4304 5974 2.417719 AGCTGTTTGAGGACGACATTC 58.582 47.619 0.00 0.00 0.00 2.67
4305 5975 2.550830 AGCTGTTTGAGGACGACATT 57.449 45.000 0.00 0.00 0.00 2.71
4306 5976 2.550830 AAGCTGTTTGAGGACGACAT 57.449 45.000 0.00 0.00 0.00 3.06
4307 5977 2.325583 AAAGCTGTTTGAGGACGACA 57.674 45.000 0.00 0.00 0.00 4.35
4308 5978 2.354821 ACAAAAGCTGTTTGAGGACGAC 59.645 45.455 20.80 0.00 32.99 4.34
4309 5979 2.639065 ACAAAAGCTGTTTGAGGACGA 58.361 42.857 20.80 0.00 32.99 4.20
4310 5980 3.420839 AACAAAAGCTGTTTGAGGACG 57.579 42.857 20.80 0.00 46.49 4.79
4340 6010 0.952280 GCTCTCCGTGTATCCATCGA 59.048 55.000 0.00 0.00 0.00 3.59
4342 6012 1.604185 GCTGCTCTCCGTGTATCCATC 60.604 57.143 0.00 0.00 0.00 3.51
4355 6025 2.031163 GTCCACAACGGCTGCTCT 59.969 61.111 0.00 0.00 33.14 4.09
4421 6093 0.524816 ACGTTGCGCTCTACGGTATG 60.525 55.000 25.46 6.68 43.76 2.39
4437 6109 0.677842 AAAGTCTTGCTACCGGACGT 59.322 50.000 9.46 0.00 35.42 4.34
4438 6110 1.725164 GAAAAGTCTTGCTACCGGACG 59.275 52.381 9.46 0.00 35.42 4.79
4439 6111 2.479275 GTGAAAAGTCTTGCTACCGGAC 59.521 50.000 9.46 0.00 0.00 4.79
4441 6113 2.223377 GTGTGAAAAGTCTTGCTACCGG 59.777 50.000 0.00 0.00 0.00 5.28
4442 6114 2.869801 TGTGTGAAAAGTCTTGCTACCG 59.130 45.455 0.00 0.00 0.00 4.02
4443 6115 3.303132 CGTGTGTGAAAAGTCTTGCTACC 60.303 47.826 0.00 0.00 0.00 3.18
4444 6116 3.554324 TCGTGTGTGAAAAGTCTTGCTAC 59.446 43.478 0.00 0.00 0.00 3.58
4445 6117 3.787785 TCGTGTGTGAAAAGTCTTGCTA 58.212 40.909 0.00 0.00 0.00 3.49
4446 6118 2.627945 TCGTGTGTGAAAAGTCTTGCT 58.372 42.857 0.00 0.00 0.00 3.91
4447 6119 3.609103 ATCGTGTGTGAAAAGTCTTGC 57.391 42.857 0.00 0.00 0.00 4.01
4448 6120 4.211164 TGCTATCGTGTGTGAAAAGTCTTG 59.789 41.667 0.00 0.00 0.00 3.02
4449 6121 4.377021 TGCTATCGTGTGTGAAAAGTCTT 58.623 39.130 0.00 0.00 0.00 3.01
4450 6122 3.990092 TGCTATCGTGTGTGAAAAGTCT 58.010 40.909 0.00 0.00 0.00 3.24
4451 6123 4.447724 TCTTGCTATCGTGTGTGAAAAGTC 59.552 41.667 0.00 0.00 0.00 3.01
4468 6145 2.795175 TCGTCTCGAAAAGTCTTGCT 57.205 45.000 0.00 0.00 31.06 3.91
4479 6156 2.159240 CCTCATCACCAAATCGTCTCGA 60.159 50.000 0.00 0.00 41.13 4.04
4480 6157 2.196749 CCTCATCACCAAATCGTCTCG 58.803 52.381 0.00 0.00 0.00 4.04
4481 6158 2.168521 TCCCTCATCACCAAATCGTCTC 59.831 50.000 0.00 0.00 0.00 3.36
4482 6159 2.187958 TCCCTCATCACCAAATCGTCT 58.812 47.619 0.00 0.00 0.00 4.18
4483 6160 2.691409 TCCCTCATCACCAAATCGTC 57.309 50.000 0.00 0.00 0.00 4.20
4484 6161 3.347216 CTTTCCCTCATCACCAAATCGT 58.653 45.455 0.00 0.00 0.00 3.73
4485 6162 2.098117 GCTTTCCCTCATCACCAAATCG 59.902 50.000 0.00 0.00 0.00 3.34
4486 6163 3.091545 TGCTTTCCCTCATCACCAAATC 58.908 45.455 0.00 0.00 0.00 2.17
4487 6164 3.173953 TGCTTTCCCTCATCACCAAAT 57.826 42.857 0.00 0.00 0.00 2.32
4488 6165 2.627699 GTTGCTTTCCCTCATCACCAAA 59.372 45.455 0.00 0.00 0.00 3.28
4489 6166 2.238521 GTTGCTTTCCCTCATCACCAA 58.761 47.619 0.00 0.00 0.00 3.67
4490 6167 1.881925 CGTTGCTTTCCCTCATCACCA 60.882 52.381 0.00 0.00 0.00 4.17
4493 6170 1.610624 GGTCGTTGCTTTCCCTCATCA 60.611 52.381 0.00 0.00 0.00 3.07
4497 6174 2.033194 CCGGTCGTTGCTTTCCCTC 61.033 63.158 0.00 0.00 0.00 4.30
4501 6178 0.953960 ATGGACCGGTCGTTGCTTTC 60.954 55.000 27.68 12.04 0.00 2.62
4530 6207 6.420604 CCATATCCAAACGAATAAATGTTGCC 59.579 38.462 0.00 0.00 0.00 4.52
4548 6225 4.098960 TCACGAGAAGTTGTACCCATATCC 59.901 45.833 0.00 0.00 0.00 2.59
4561 6238 4.868067 AGTTTAATCACGTCACGAGAAGT 58.132 39.130 2.91 0.00 36.91 3.01
4595 6275 4.059459 GCAGCGTGTGACGAACGG 62.059 66.667 0.00 0.00 46.05 4.44
4596 6276 4.059459 GGCAGCGTGTGACGAACG 62.059 66.667 0.00 0.00 46.05 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.