Multiple sequence alignment - TraesCS7A01G450000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G450000 chr7A 100.000 5301 0 0 1 5301 643835844 643841144 0.000000e+00 9790.0
1 TraesCS7A01G450000 chr7A 96.618 207 7 0 4299 4505 643855475 643855681 1.410000e-90 344.0
2 TraesCS7A01G450000 chr7B 87.961 2168 148 48 492 2606 606555653 606557760 0.000000e+00 2453.0
3 TraesCS7A01G450000 chr7B 91.048 849 57 11 3433 4280 606562613 606563443 0.000000e+00 1129.0
4 TraesCS7A01G450000 chr7B 86.381 771 66 15 4299 5037 161606392 161607155 0.000000e+00 806.0
5 TraesCS7A01G450000 chr7B 87.805 451 41 9 4299 4747 674977687 674978125 2.830000e-142 516.0
6 TraesCS7A01G450000 chr7B 90.845 142 10 3 723 862 646691591 646691731 2.520000e-43 187.0
7 TraesCS7A01G450000 chr7B 89.423 104 10 1 90 192 606554601 606554704 4.310000e-26 130.0
8 TraesCS7A01G450000 chr7B 93.333 60 2 1 3191 3250 606561317 606561374 2.630000e-13 87.9
9 TraesCS7A01G450000 chr7B 88.732 71 8 0 3245 3315 606562508 606562578 2.630000e-13 87.9
10 TraesCS7A01G450000 chr7B 97.778 45 1 0 3059 3103 606561256 606561300 1.580000e-10 78.7
11 TraesCS7A01G450000 chr7D 92.489 1145 63 14 397 1530 558953953 558955085 0.000000e+00 1616.0
12 TraesCS7A01G450000 chr7D 91.945 807 43 13 3498 4302 558956340 558957126 0.000000e+00 1110.0
13 TraesCS7A01G450000 chr7D 88.991 436 39 5 4315 4747 395201683 395202112 1.010000e-146 531.0
14 TraesCS7A01G450000 chr7D 93.833 227 13 1 90 316 558953704 558953929 1.830000e-89 340.0
15 TraesCS7A01G450000 chr7D 92.754 207 14 1 4300 4505 395220109 395220315 1.120000e-76 298.0
16 TraesCS7A01G450000 chr5D 88.304 1026 79 21 4298 5290 548952005 548950988 0.000000e+00 1192.0
17 TraesCS7A01G450000 chr5D 90.338 207 20 0 4299 4505 548946365 548946159 6.760000e-69 272.0
18 TraesCS7A01G450000 chr5D 92.857 42 2 1 3395 3435 552962671 552962712 5.730000e-05 60.2
19 TraesCS7A01G450000 chr2D 87.926 1027 89 18 4299 5293 190568217 190567194 0.000000e+00 1177.0
20 TraesCS7A01G450000 chr2D 85.304 871 83 28 4455 5293 469927288 469926431 0.000000e+00 857.0
21 TraesCS7A01G450000 chr2D 91.324 219 19 0 4299 4517 190550962 190550744 3.100000e-77 300.0
22 TraesCS7A01G450000 chr2D 100.000 29 0 0 3407 3435 534635657 534635629 3.000000e-03 54.7
23 TraesCS7A01G450000 chr2D 100.000 28 0 0 2792 2819 626279014 626278987 1.000000e-02 52.8
24 TraesCS7A01G450000 chr3B 86.777 847 71 24 4470 5286 792766584 792765749 0.000000e+00 905.0
25 TraesCS7A01G450000 chr3B 89.583 48 3 2 3395 3441 173371515 173371469 5.730000e-05 60.2
26 TraesCS7A01G450000 chr3B 92.683 41 2 1 3395 3434 173375725 173375685 2.060000e-04 58.4
27 TraesCS7A01G450000 chr6A 85.911 873 84 17 4449 5290 97601773 97600909 0.000000e+00 894.0
28 TraesCS7A01G450000 chr6A 100.000 28 0 0 3408 3435 611296575 611296602 1.000000e-02 52.8
29 TraesCS7A01G450000 chr6B 86.675 833 69 27 4490 5290 658766690 658765868 0.000000e+00 885.0
30 TraesCS7A01G450000 chr6B 94.737 38 2 0 3398 3435 176653669 176653706 5.730000e-05 60.2
31 TraesCS7A01G450000 chr6B 92.857 42 2 1 3395 3435 510402485 510402444 5.730000e-05 60.2
32 TraesCS7A01G450000 chr5A 85.963 862 77 21 4472 5299 584448093 584447242 0.000000e+00 881.0
33 TraesCS7A01G450000 chr5A 77.620 916 146 36 4412 5301 523280725 523281607 7.930000e-138 501.0
34 TraesCS7A01G450000 chr5A 89.333 150 13 3 721 868 685307149 685307001 9.070000e-43 185.0
35 TraesCS7A01G450000 chr5A 89.706 68 5 2 27 94 255342153 255342088 9.460000e-13 86.1
36 TraesCS7A01G450000 chr5A 89.796 49 3 2 3395 3441 584277330 584277378 1.590000e-05 62.1
37 TraesCS7A01G450000 chr6D 85.930 860 77 27 4467 5293 464710551 464709703 0.000000e+00 878.0
38 TraesCS7A01G450000 chr6D 90.476 42 3 1 3397 3438 448907115 448907155 3.000000e-03 54.7
39 TraesCS7A01G450000 chr3A 85.563 852 85 23 4476 5296 545282976 545283820 0.000000e+00 857.0
40 TraesCS7A01G450000 chr3A 84.862 218 22 7 721 936 149210052 149209844 5.380000e-50 209.0
41 TraesCS7A01G450000 chr3A 85.930 199 17 7 723 919 665687753 665687942 9.000000e-48 202.0
42 TraesCS7A01G450000 chr3A 83.482 224 26 7 715 936 92259616 92259830 1.160000e-46 198.0
43 TraesCS7A01G450000 chr3A 83.036 224 28 6 715 936 219226174 219226389 1.510000e-45 195.0
44 TraesCS7A01G450000 chr3A 86.585 82 9 2 8 88 235835182 235835102 7.310000e-14 89.8
45 TraesCS7A01G450000 chr3A 94.737 38 2 0 3398 3435 131282616 131282653 5.730000e-05 60.2
46 TraesCS7A01G450000 chr3D 91.239 331 24 3 4417 4747 584421747 584421422 3.770000e-121 446.0
47 TraesCS7A01G450000 chr3D 92.308 78 6 0 4299 4376 584421834 584421757 1.560000e-20 111.0
48 TraesCS7A01G450000 chr3D 86.517 89 8 4 8 94 60517487 60517401 1.570000e-15 95.3
49 TraesCS7A01G450000 chr3D 82.828 99 10 4 7 98 568872107 568872205 1.220000e-11 82.4
50 TraesCS7A01G450000 chr3D 92.105 38 3 0 3398 3435 81940695 81940658 3.000000e-03 54.7
51 TraesCS7A01G450000 chr3D 100.000 28 0 0 3408 3435 460192212 460192185 1.000000e-02 52.8
52 TraesCS7A01G450000 chr2B 84.906 424 51 11 4330 4747 401299167 401298751 2.950000e-112 416.0
53 TraesCS7A01G450000 chr2B 92.857 42 2 1 3395 3435 375608710 375608669 5.730000e-05 60.2
54 TraesCS7A01G450000 chr2B 94.444 36 2 0 3400 3435 148519041 148519076 7.420000e-04 56.5
55 TraesCS7A01G450000 chr5B 81.007 437 62 18 4320 4747 602953138 602953562 1.420000e-85 327.0
56 TraesCS7A01G450000 chr5B 94.872 39 2 0 3398 3436 468837179 468837217 1.590000e-05 62.1
57 TraesCS7A01G450000 chr5B 94.737 38 2 0 3398 3435 270867581 270867544 5.730000e-05 60.2
58 TraesCS7A01G450000 chr1A 83.482 224 26 7 715 936 270719566 270719780 1.160000e-46 198.0
59 TraesCS7A01G450000 chr1A 85.542 83 11 1 7 88 565736165 565736083 9.460000e-13 86.1
60 TraesCS7A01G450000 chr1A 82.653 98 14 3 8 103 162652457 162652553 3.400000e-12 84.2
61 TraesCS7A01G450000 chrUn 87.179 78 8 2 9 85 310106844 310106768 2.630000e-13 87.9
62 TraesCS7A01G450000 chr1D 87.179 78 8 2 9 85 316188552 316188628 2.630000e-13 87.9
63 TraesCS7A01G450000 chr1B 86.420 81 10 1 7 86 469195068 469194988 2.630000e-13 87.9
64 TraesCS7A01G450000 chr4B 94.286 35 2 0 3400 3434 658205939 658205905 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G450000 chr7A 643835844 643841144 5300 False 9790.000000 9790 100.000000 1 5301 1 chr7A.!!$F1 5300
1 TraesCS7A01G450000 chr7B 161606392 161607155 763 False 806.000000 806 86.381000 4299 5037 1 chr7B.!!$F1 738
2 TraesCS7A01G450000 chr7B 606554601 606563443 8842 False 661.083333 2453 91.379167 90 4280 6 chr7B.!!$F4 4190
3 TraesCS7A01G450000 chr7D 558953704 558957126 3422 False 1022.000000 1616 92.755667 90 4302 3 chr7D.!!$F3 4212
4 TraesCS7A01G450000 chr5D 548950988 548952005 1017 True 1192.000000 1192 88.304000 4298 5290 1 chr5D.!!$R2 992
5 TraesCS7A01G450000 chr2D 190567194 190568217 1023 True 1177.000000 1177 87.926000 4299 5293 1 chr2D.!!$R2 994
6 TraesCS7A01G450000 chr2D 469926431 469927288 857 True 857.000000 857 85.304000 4455 5293 1 chr2D.!!$R3 838
7 TraesCS7A01G450000 chr3B 792765749 792766584 835 True 905.000000 905 86.777000 4470 5286 1 chr3B.!!$R3 816
8 TraesCS7A01G450000 chr6A 97600909 97601773 864 True 894.000000 894 85.911000 4449 5290 1 chr6A.!!$R1 841
9 TraesCS7A01G450000 chr6B 658765868 658766690 822 True 885.000000 885 86.675000 4490 5290 1 chr6B.!!$R2 800
10 TraesCS7A01G450000 chr5A 584447242 584448093 851 True 881.000000 881 85.963000 4472 5299 1 chr5A.!!$R2 827
11 TraesCS7A01G450000 chr5A 523280725 523281607 882 False 501.000000 501 77.620000 4412 5301 1 chr5A.!!$F1 889
12 TraesCS7A01G450000 chr6D 464709703 464710551 848 True 878.000000 878 85.930000 4467 5293 1 chr6D.!!$R1 826
13 TraesCS7A01G450000 chr3A 545282976 545283820 844 False 857.000000 857 85.563000 4476 5296 1 chr3A.!!$F4 820

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.304705 AATGCCGCGACGATGAATTC 59.695 50.0 8.23 0.0 0.00 2.17 F
71 72 0.318762 GAGAGACTCAACCCGTGCTT 59.681 55.0 5.02 0.0 0.00 3.91 F
72 73 0.759346 AGAGACTCAACCCGTGCTTT 59.241 50.0 5.02 0.0 0.00 3.51 F
1668 2366 1.151777 TAGCGAGCTATTTGTGGCGC 61.152 55.0 0.00 0.0 44.22 6.53 F
3382 9262 0.098728 GCGACGCTGTAATGCCAAAT 59.901 50.0 13.73 0.0 0.00 2.32 F
3456 9336 0.538287 ACTTGAACCCTTGCAGCTCC 60.538 55.0 0.00 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1977 2695 0.166814 GGCGTCATGTGCTTTGACTC 59.833 55.000 11.43 4.82 41.05 3.36 R
1981 2699 0.726827 ATACGGCGTCATGTGCTTTG 59.273 50.000 19.21 5.90 0.00 2.77 R
1982 2700 2.303163 TATACGGCGTCATGTGCTTT 57.697 45.000 19.21 0.00 0.00 3.51 R
3416 9296 0.187851 GATACTCCCTCCCTCCGGAA 59.812 60.000 5.23 0.00 37.86 4.30 R
4204 10084 0.035820 TGTATTCCGCCCAGGTGAAC 60.036 55.000 0.00 0.00 41.99 3.18 R
4369 10249 1.134818 TCCATTCGTTCACATCCCTCG 60.135 52.381 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.839680 ATTAAAAACACAGGGATCTCTTTGT 57.160 32.000 8.64 8.64 29.89 2.83
29 30 8.934023 ATTAAAAACACAGGGATCTCTTTGTA 57.066 30.769 14.69 0.00 28.77 2.41
30 31 8.754991 TTAAAAACACAGGGATCTCTTTGTAA 57.245 30.769 14.69 3.03 28.77 2.41
31 32 7.839680 AAAAACACAGGGATCTCTTTGTAAT 57.160 32.000 14.69 4.74 28.77 1.89
32 33 8.934023 AAAAACACAGGGATCTCTTTGTAATA 57.066 30.769 14.69 0.00 28.77 0.98
33 34 8.934023 AAAACACAGGGATCTCTTTGTAATAA 57.066 30.769 14.69 0.00 28.77 1.40
34 35 9.533831 AAAACACAGGGATCTCTTTGTAATAAT 57.466 29.630 14.69 0.00 28.77 1.28
35 36 8.511604 AACACAGGGATCTCTTTGTAATAATG 57.488 34.615 14.69 0.00 28.77 1.90
36 37 6.543831 ACACAGGGATCTCTTTGTAATAATGC 59.456 38.462 12.79 0.00 0.00 3.56
37 38 6.016777 CACAGGGATCTCTTTGTAATAATGCC 60.017 42.308 0.17 0.00 0.00 4.40
38 39 5.180117 CAGGGATCTCTTTGTAATAATGCCG 59.820 44.000 0.00 0.00 30.77 5.69
39 40 4.083271 GGGATCTCTTTGTAATAATGCCGC 60.083 45.833 0.00 0.00 0.00 6.53
40 41 4.377431 GGATCTCTTTGTAATAATGCCGCG 60.377 45.833 0.00 0.00 0.00 6.46
41 42 3.787785 TCTCTTTGTAATAATGCCGCGA 58.212 40.909 8.23 0.00 0.00 5.87
42 43 3.554324 TCTCTTTGTAATAATGCCGCGAC 59.446 43.478 8.23 0.00 0.00 5.19
43 44 2.283086 TCTTTGTAATAATGCCGCGACG 59.717 45.455 8.23 0.00 0.00 5.12
44 45 1.923899 TTGTAATAATGCCGCGACGA 58.076 45.000 8.23 0.00 0.00 4.20
45 46 2.143008 TGTAATAATGCCGCGACGAT 57.857 45.000 8.23 0.00 0.00 3.73
46 47 1.790043 TGTAATAATGCCGCGACGATG 59.210 47.619 8.23 0.00 0.00 3.84
47 48 2.055838 GTAATAATGCCGCGACGATGA 58.944 47.619 8.23 0.00 0.00 2.92
48 49 1.577468 AATAATGCCGCGACGATGAA 58.423 45.000 8.23 0.00 0.00 2.57
49 50 1.795768 ATAATGCCGCGACGATGAAT 58.204 45.000 8.23 0.00 0.00 2.57
50 51 1.577468 TAATGCCGCGACGATGAATT 58.423 45.000 8.23 0.00 0.00 2.17
51 52 0.304705 AATGCCGCGACGATGAATTC 59.695 50.000 8.23 0.00 0.00 2.17
65 66 3.594603 TGAATTCGAGAGACTCAACCC 57.405 47.619 5.02 0.00 41.84 4.11
66 67 2.094700 TGAATTCGAGAGACTCAACCCG 60.095 50.000 5.02 3.06 41.84 5.28
67 68 1.546961 ATTCGAGAGACTCAACCCGT 58.453 50.000 5.02 0.00 41.84 5.28
68 69 0.596577 TTCGAGAGACTCAACCCGTG 59.403 55.000 5.02 0.00 41.84 4.94
69 70 1.444553 CGAGAGACTCAACCCGTGC 60.445 63.158 5.02 0.00 0.00 5.34
70 71 1.867919 CGAGAGACTCAACCCGTGCT 61.868 60.000 5.02 0.00 0.00 4.40
71 72 0.318762 GAGAGACTCAACCCGTGCTT 59.681 55.000 5.02 0.00 0.00 3.91
72 73 0.759346 AGAGACTCAACCCGTGCTTT 59.241 50.000 5.02 0.00 0.00 3.51
73 74 1.968493 AGAGACTCAACCCGTGCTTTA 59.032 47.619 5.02 0.00 0.00 1.85
74 75 2.567615 AGAGACTCAACCCGTGCTTTAT 59.432 45.455 5.02 0.00 0.00 1.40
75 76 3.008049 AGAGACTCAACCCGTGCTTTATT 59.992 43.478 5.02 0.00 0.00 1.40
76 77 4.222145 AGAGACTCAACCCGTGCTTTATTA 59.778 41.667 5.02 0.00 0.00 0.98
77 78 5.099042 AGACTCAACCCGTGCTTTATTAT 57.901 39.130 0.00 0.00 0.00 1.28
78 79 5.497474 AGACTCAACCCGTGCTTTATTATT 58.503 37.500 0.00 0.00 0.00 1.40
79 80 6.646267 AGACTCAACCCGTGCTTTATTATTA 58.354 36.000 0.00 0.00 0.00 0.98
80 81 6.761714 AGACTCAACCCGTGCTTTATTATTAG 59.238 38.462 0.00 0.00 0.00 1.73
81 82 5.820947 ACTCAACCCGTGCTTTATTATTAGG 59.179 40.000 0.00 0.00 0.00 2.69
82 83 5.127491 TCAACCCGTGCTTTATTATTAGGG 58.873 41.667 0.00 0.00 43.03 3.53
83 84 5.104444 TCAACCCGTGCTTTATTATTAGGGA 60.104 40.000 4.00 0.00 39.95 4.20
84 85 5.376756 ACCCGTGCTTTATTATTAGGGAA 57.623 39.130 4.00 0.00 39.95 3.97
85 86 5.757988 ACCCGTGCTTTATTATTAGGGAAA 58.242 37.500 4.00 0.00 39.95 3.13
86 87 5.826208 ACCCGTGCTTTATTATTAGGGAAAG 59.174 40.000 4.00 0.00 39.95 2.62
87 88 6.059484 CCCGTGCTTTATTATTAGGGAAAGA 58.941 40.000 0.00 0.00 39.95 2.52
88 89 6.017357 CCCGTGCTTTATTATTAGGGAAAGAC 60.017 42.308 0.00 0.00 39.95 3.01
141 142 8.927411 TCCAGATCATCTACTCATATGAAAACA 58.073 33.333 6.90 0.00 35.82 2.83
197 198 5.175126 GCGAGTATGCAGTATGTTTTATCGT 59.825 40.000 0.00 0.00 39.31 3.73
215 696 7.941795 TTATCGTTATAAGCCTTGCTACTTC 57.058 36.000 0.00 0.00 38.25 3.01
305 788 5.939883 TGTACATCCACTCTTGATTTCCTTG 59.060 40.000 0.00 0.00 0.00 3.61
312 795 3.395941 ACTCTTGATTTCCTTGACTGGGT 59.604 43.478 0.00 0.00 0.00 4.51
316 799 3.689347 TGATTTCCTTGACTGGGTGATG 58.311 45.455 0.00 0.00 0.00 3.07
319 802 3.695830 TTCCTTGACTGGGTGATGTAC 57.304 47.619 0.00 0.00 0.00 2.90
354 837 7.361438 TCTGTTATGGGGAATTGTTATGGATT 58.639 34.615 0.00 0.00 0.00 3.01
355 838 7.287466 TCTGTTATGGGGAATTGTTATGGATTG 59.713 37.037 0.00 0.00 0.00 2.67
356 839 6.326064 TGTTATGGGGAATTGTTATGGATTGG 59.674 38.462 0.00 0.00 0.00 3.16
358 841 4.693420 TGGGGAATTGTTATGGATTGGTT 58.307 39.130 0.00 0.00 0.00 3.67
359 842 4.469227 TGGGGAATTGTTATGGATTGGTTG 59.531 41.667 0.00 0.00 0.00 3.77
360 843 4.469586 GGGGAATTGTTATGGATTGGTTGT 59.530 41.667 0.00 0.00 0.00 3.32
364 847 7.386059 GGAATTGTTATGGATTGGTTGTTTCT 58.614 34.615 0.00 0.00 0.00 2.52
381 864 6.959639 TGTTTCTTTCAAGAGGCTAATTGT 57.040 33.333 10.67 0.00 36.22 2.71
462 946 5.221986 CCATCTATGAACCCCAGATCATTGA 60.222 44.000 0.00 3.20 40.35 2.57
465 949 3.634397 TGAACCCCAGATCATTGACTC 57.366 47.619 0.00 0.00 0.00 3.36
466 950 3.184628 TGAACCCCAGATCATTGACTCT 58.815 45.455 0.00 0.00 0.00 3.24
469 953 4.762289 ACCCCAGATCATTGACTCTTAC 57.238 45.455 0.00 0.00 0.00 2.34
505 1171 8.389366 AGAGAGGCCTTGCTATTCAAATAATAT 58.611 33.333 6.77 0.00 33.65 1.28
556 1222 6.803642 ACGGGTCATCTAGTTATTCTAACAC 58.196 40.000 0.39 0.00 0.00 3.32
557 1223 6.183360 ACGGGTCATCTAGTTATTCTAACACC 60.183 42.308 0.39 0.00 0.00 4.16
570 1236 1.412453 TAACACCAGGGCCGTGTCTT 61.412 55.000 23.21 13.19 43.56 3.01
684 1350 2.673368 CGGCAATTTAGAGAAAGCGAGT 59.327 45.455 0.00 0.00 0.00 4.18
685 1351 3.863424 CGGCAATTTAGAGAAAGCGAGTA 59.137 43.478 0.00 0.00 0.00 2.59
689 1356 6.702282 GGCAATTTAGAGAAAGCGAGTAGTAT 59.298 38.462 0.00 0.00 0.00 2.12
713 1380 2.434336 CTGGTTCTAATCATCCCCGACA 59.566 50.000 0.00 0.00 0.00 4.35
727 1394 5.080969 TCCCCGACAACTAAACTAATCAG 57.919 43.478 0.00 0.00 0.00 2.90
853 1521 4.643387 GCCACGAACCACCTGGCT 62.643 66.667 3.85 0.00 43.77 4.75
893 1561 1.211949 AGTAGCAACACACACCACCTT 59.788 47.619 0.00 0.00 0.00 3.50
942 1610 3.788694 CACACACAAATAACACAACACCG 59.211 43.478 0.00 0.00 0.00 4.94
945 1619 4.035324 CACACAAATAACACAACACCGGTA 59.965 41.667 6.87 0.00 0.00 4.02
946 1620 4.639310 ACACAAATAACACAACACCGGTAA 59.361 37.500 6.87 0.00 0.00 2.85
952 1626 2.291365 ACACAACACCGGTAAAAGGTC 58.709 47.619 6.87 0.00 40.59 3.85
995 1669 4.354212 CCAAGACGTGCGTGCGTG 62.354 66.667 10.76 3.11 45.79 5.34
1017 1691 1.153309 CATGATGGCGTCCTCTGCA 60.153 57.895 3.88 0.00 0.00 4.41
1142 1819 2.511600 GATGGTGGAGGCGTTCGG 60.512 66.667 0.00 0.00 0.00 4.30
1475 2152 9.988350 CATGAACATGAATAAACTTGTACCTAC 57.012 33.333 8.89 0.00 41.20 3.18
1498 2175 6.208644 ACATTCATTGTTTCTTTGTTCTCGG 58.791 36.000 0.00 0.00 33.74 4.63
1573 2271 3.798889 GCAGCCCTTAATTAAAATCCGCC 60.799 47.826 0.00 0.00 0.00 6.13
1577 2275 4.202212 GCCCTTAATTAAAATCCGCCATGT 60.202 41.667 0.00 0.00 0.00 3.21
1579 2277 5.068460 CCCTTAATTAAAATCCGCCATGTCA 59.932 40.000 0.00 0.00 0.00 3.58
1589 2287 4.882842 TCCGCCATGTCAAAGCTATATA 57.117 40.909 0.00 0.00 0.00 0.86
1591 2289 4.994852 TCCGCCATGTCAAAGCTATATAAC 59.005 41.667 0.00 0.00 0.00 1.89
1593 2291 4.666655 CGCCATGTCAAAGCTATATAACGC 60.667 45.833 0.00 0.00 0.00 4.84
1613 2311 6.918892 ACGCTATAGCAAATGATTGTACAA 57.081 33.333 23.99 11.41 42.21 2.41
1615 2313 7.355017 ACGCTATAGCAAATGATTGTACAATG 58.645 34.615 25.42 13.22 42.21 2.82
1616 2314 7.226523 ACGCTATAGCAAATGATTGTACAATGA 59.773 33.333 25.42 17.97 42.21 2.57
1617 2315 8.232513 CGCTATAGCAAATGATTGTACAATGAT 58.767 33.333 25.42 19.48 42.21 2.45
1628 2326 8.839947 TGATTGTACAATGATTTCATTTAGCG 57.160 30.769 25.42 0.00 43.48 4.26
1629 2327 8.672815 TGATTGTACAATGATTTCATTTAGCGA 58.327 29.630 25.42 0.00 43.48 4.93
1630 2328 9.162793 GATTGTACAATGATTTCATTTAGCGAG 57.837 33.333 25.42 0.00 43.48 5.03
1631 2329 7.841915 TGTACAATGATTTCATTTAGCGAGA 57.158 32.000 3.06 0.00 43.48 4.04
1632 2330 7.909267 TGTACAATGATTTCATTTAGCGAGAG 58.091 34.615 3.06 0.00 43.48 3.20
1633 2331 7.763985 TGTACAATGATTTCATTTAGCGAGAGA 59.236 33.333 3.06 0.00 43.48 3.10
1634 2332 7.798596 ACAATGATTTCATTTAGCGAGAGAT 57.201 32.000 3.06 0.00 43.48 2.75
1635 2333 8.218338 ACAATGATTTCATTTAGCGAGAGATT 57.782 30.769 3.06 0.00 43.48 2.40
1636 2334 8.127327 ACAATGATTTCATTTAGCGAGAGATTG 58.873 33.333 3.06 0.00 43.48 2.67
1637 2335 6.052840 TGATTTCATTTAGCGAGAGATTGC 57.947 37.500 0.00 0.00 0.00 3.56
1638 2336 5.819379 TGATTTCATTTAGCGAGAGATTGCT 59.181 36.000 0.00 0.00 45.04 3.91
1639 2337 5.725110 TTTCATTTAGCGAGAGATTGCTC 57.275 39.130 0.00 0.00 42.48 4.26
1640 2338 4.391405 TCATTTAGCGAGAGATTGCTCA 57.609 40.909 0.00 0.00 43.81 4.26
1643 2341 4.456280 TTTAGCGAGAGATTGCTCAGAA 57.544 40.909 0.00 0.00 43.81 3.02
1649 2347 3.549827 CGAGAGATTGCTCAGAACGCTAT 60.550 47.826 0.00 0.00 43.81 2.97
1667 2365 1.502231 ATAGCGAGCTATTTGTGGCG 58.498 50.000 11.48 0.00 35.92 5.69
1668 2366 1.151777 TAGCGAGCTATTTGTGGCGC 61.152 55.000 0.00 0.00 44.22 6.53
1671 2369 1.502231 CGAGCTATTTGTGGCGCTAT 58.498 50.000 7.64 0.00 31.96 2.97
1673 2371 2.663602 CGAGCTATTTGTGGCGCTATAG 59.336 50.000 7.64 13.09 31.96 1.31
1733 2431 2.287728 TGTTGTGTCATCATGCTGTTGC 60.288 45.455 0.00 0.00 40.20 4.17
1750 2448 5.106277 GCTGTTGCATATGATGATACTGCAT 60.106 40.000 6.97 0.00 41.95 3.96
1754 2452 6.045072 TGCATATGATGATACTGCATCTCA 57.955 37.500 6.97 0.00 43.89 3.27
1757 2455 6.594547 GCATATGATGATACTGCATCTCAAGT 59.405 38.462 6.97 0.00 43.89 3.16
1758 2456 7.119407 GCATATGATGATACTGCATCTCAAGTT 59.881 37.037 6.97 0.00 43.89 2.66
1759 2457 9.000486 CATATGATGATACTGCATCTCAAGTTT 58.000 33.333 0.00 0.00 43.89 2.66
1760 2458 7.876936 ATGATGATACTGCATCTCAAGTTTT 57.123 32.000 0.00 0.00 43.89 2.43
1761 2459 7.080353 TGATGATACTGCATCTCAAGTTTTG 57.920 36.000 0.00 0.00 43.89 2.44
1762 2460 5.885230 TGATACTGCATCTCAAGTTTTGG 57.115 39.130 0.00 0.00 34.46 3.28
1763 2461 5.559770 TGATACTGCATCTCAAGTTTTGGA 58.440 37.500 0.00 0.00 34.46 3.53
1764 2462 5.645067 TGATACTGCATCTCAAGTTTTGGAG 59.355 40.000 0.00 0.00 34.46 3.86
1765 2463 4.090761 ACTGCATCTCAAGTTTTGGAGA 57.909 40.909 0.00 0.00 43.71 3.71
1767 2465 4.699257 ACTGCATCTCAAGTTTTGGAGATC 59.301 41.667 0.00 0.00 45.30 2.75
1768 2466 4.914983 TGCATCTCAAGTTTTGGAGATCT 58.085 39.130 0.00 0.00 45.30 2.75
1769 2467 5.319453 TGCATCTCAAGTTTTGGAGATCTT 58.681 37.500 0.00 0.00 45.30 2.40
1770 2468 5.413833 TGCATCTCAAGTTTTGGAGATCTTC 59.586 40.000 0.00 0.00 45.30 2.87
1771 2469 5.413833 GCATCTCAAGTTTTGGAGATCTTCA 59.586 40.000 0.00 0.00 45.30 3.02
1772 2470 6.095160 GCATCTCAAGTTTTGGAGATCTTCAT 59.905 38.462 4.02 0.00 45.30 2.57
1809 2507 6.470278 TCACCATATCTTAATCTCTGCATGG 58.530 40.000 0.00 0.00 38.11 3.66
1812 2510 6.214208 ACCATATCTTAATCTCTGCATGGCTA 59.786 38.462 0.00 0.00 36.05 3.93
1830 2528 2.419574 GCTAAGCGAAATACCACCTCCA 60.420 50.000 0.00 0.00 0.00 3.86
1831 2529 3.744530 GCTAAGCGAAATACCACCTCCAT 60.745 47.826 0.00 0.00 0.00 3.41
1841 2539 7.362920 CGAAATACCACCTCCATTTTCAGAAAT 60.363 37.037 0.00 0.00 35.90 2.17
1856 2554 8.958119 TTTTCAGAAATGACTTACTGTGTAGT 57.042 30.769 0.00 0.00 40.99 2.73
1857 2555 8.589335 TTTCAGAAATGACTTACTGTGTAGTC 57.411 34.615 14.35 14.35 40.89 2.59
1866 2564 6.914215 TGACTTACTGTGTAGTCAAACTTACG 59.086 38.462 18.98 0.00 45.60 3.18
1868 2566 6.914757 ACTTACTGTGTAGTCAAACTTACGAC 59.085 38.462 0.00 0.00 38.36 4.34
1934 2651 8.526218 AGAATAATAGCATTAGACATGTCGTG 57.474 34.615 19.85 19.09 34.09 4.35
1997 2718 1.154413 GTCAAAGCACATGACGCCG 60.154 57.895 0.00 0.00 37.98 6.46
1999 2720 0.319986 TCAAAGCACATGACGCCGTA 60.320 50.000 0.00 0.00 0.00 4.02
2001 2722 1.930503 CAAAGCACATGACGCCGTATA 59.069 47.619 0.00 0.00 0.00 1.47
2028 2749 5.941733 TCTAAAACATCAGCTACGTACGAA 58.058 37.500 24.41 0.01 0.00 3.85
2029 2750 6.558009 TCTAAAACATCAGCTACGTACGAAT 58.442 36.000 24.41 2.35 0.00 3.34
2030 2751 7.696755 TCTAAAACATCAGCTACGTACGAATA 58.303 34.615 24.41 3.62 0.00 1.75
2031 2752 6.807708 AAAACATCAGCTACGTACGAATAG 57.192 37.500 24.41 15.00 0.00 1.73
2036 2757 8.041829 ACATCAGCTACGTACGAATAGATAAT 57.958 34.615 24.41 1.36 0.00 1.28
2109 2830 3.189606 AGAATTCTCATGGTGGGTGGTA 58.810 45.455 0.88 0.00 0.00 3.25
2196 2917 7.241376 GTGTTTTGTATGACCTACAATAGCAC 58.759 38.462 4.44 9.27 46.88 4.40
2209 2930 7.499232 ACCTACAATAGCACCTTATTTCATGAC 59.501 37.037 0.00 0.00 0.00 3.06
2216 2937 7.502120 AGCACCTTATTTCATGACATGATAC 57.498 36.000 18.62 1.41 39.39 2.24
2244 2965 8.341892 ACATCCTCTCTTTTTCCTCAATTAAC 57.658 34.615 0.00 0.00 0.00 2.01
2251 2972 9.231297 TCTCTTTTTCCTCAATTAACAGTATGG 57.769 33.333 0.00 0.00 43.62 2.74
2253 2974 5.811399 TTTCCTCAATTAACAGTATGGCG 57.189 39.130 0.00 0.00 43.62 5.69
2280 3001 5.128663 TGAGCACTATGCCTAGTTGACATTA 59.871 40.000 0.00 0.00 46.52 1.90
2281 3002 5.605534 AGCACTATGCCTAGTTGACATTAG 58.394 41.667 0.00 0.00 46.52 1.73
2284 3005 6.146837 GCACTATGCCTAGTTGACATTAGATG 59.853 42.308 0.00 0.00 35.99 2.90
2320 3043 3.186283 ACAGTTGTCATACCCATACCCA 58.814 45.455 0.00 0.00 0.00 4.51
2321 3044 3.054655 ACAGTTGTCATACCCATACCCAC 60.055 47.826 0.00 0.00 0.00 4.61
2322 3045 3.199946 CAGTTGTCATACCCATACCCACT 59.800 47.826 0.00 0.00 0.00 4.00
2323 3046 3.199946 AGTTGTCATACCCATACCCACTG 59.800 47.826 0.00 0.00 0.00 3.66
2324 3047 3.123392 TGTCATACCCATACCCACTGA 57.877 47.619 0.00 0.00 0.00 3.41
2325 3048 3.038280 TGTCATACCCATACCCACTGAG 58.962 50.000 0.00 0.00 0.00 3.35
2326 3049 3.039011 GTCATACCCATACCCACTGAGT 58.961 50.000 0.00 0.00 0.00 3.41
2389 3113 9.631452 TTAATGCGTGATTTTCATCATGTTTAA 57.369 25.926 6.35 7.82 45.19 1.52
2390 3114 8.706492 AATGCGTGATTTTCATCATGTTTAAT 57.294 26.923 6.35 0.00 45.19 1.40
2411 3137 6.754702 AATTCATGAATCACAGGAGTTCAG 57.245 37.500 20.95 0.00 40.37 3.02
2453 3179 0.616371 TAACCTACATGGCGCCAAGT 59.384 50.000 36.22 36.22 40.22 3.16
2470 3196 2.052104 GTTGATTGGGGGAAGGGCG 61.052 63.158 0.00 0.00 0.00 6.13
2486 3212 0.598942 GGCGCCATTTTTCCGTGTTT 60.599 50.000 24.80 0.00 0.00 2.83
2488 3214 1.866063 GCGCCATTTTTCCGTGTTTGA 60.866 47.619 0.00 0.00 0.00 2.69
2498 3224 3.646611 TCCGTGTTTGATACGTTCTGA 57.353 42.857 0.00 0.00 39.76 3.27
2516 3242 9.659830 ACGTTCTGAAACATTTTATCAAAGTAC 57.340 29.630 0.00 0.00 34.93 2.73
2517 3243 9.878599 CGTTCTGAAACATTTTATCAAAGTACT 57.121 29.630 0.00 0.00 34.93 2.73
2606 3332 8.424274 AAATTCAAAGGACACAATTGTTTCTC 57.576 30.769 20.90 12.80 35.47 2.87
2607 3333 5.514274 TCAAAGGACACAATTGTTTCTCC 57.486 39.130 20.90 17.72 35.47 3.71
2609 3335 5.299279 TCAAAGGACACAATTGTTTCTCCTC 59.701 40.000 21.59 9.17 35.47 3.71
2611 3337 3.138283 AGGACACAATTGTTTCTCCTCCA 59.862 43.478 20.90 0.00 35.47 3.86
2615 3341 6.127897 GGACACAATTGTTTCTCCTCCAATAG 60.128 42.308 20.90 3.49 35.47 1.73
2617 3343 6.207417 ACACAATTGTTTCTCCTCCAATAGTG 59.793 38.462 8.77 0.00 28.43 2.74
2624 6423 4.207891 TCTCCTCCAATAGTGCTTTGTC 57.792 45.455 0.00 0.00 0.00 3.18
2636 6435 0.598419 GCTTTGTCCAGTTGCCTTGC 60.598 55.000 0.00 0.00 0.00 4.01
2639 6438 1.165907 TTGTCCAGTTGCCTTGCTCG 61.166 55.000 0.00 0.00 0.00 5.03
2645 6444 2.110835 TTGCCTTGCTCGCTCACA 59.889 55.556 0.00 0.00 0.00 3.58
2649 6448 2.091112 CCTTGCTCGCTCACACTCG 61.091 63.158 0.00 0.00 0.00 4.18
2660 6459 0.107410 TCACACTCGTTGGCTGGTTT 60.107 50.000 0.00 0.00 0.00 3.27
2679 6478 2.258591 GTCGCCTTGACTCGCTCA 59.741 61.111 0.00 0.00 44.58 4.26
2688 6487 1.079750 GACTCGCTCACTTGGTCCC 60.080 63.158 0.00 0.00 0.00 4.46
2690 6489 3.316573 CTCGCTCACTTGGTCCCCC 62.317 68.421 0.00 0.00 0.00 5.40
2726 6525 3.375699 ACCAACCTCTACTAGTCCATGG 58.624 50.000 4.97 4.97 0.00 3.66
2731 6530 5.941555 ACCTCTACTAGTCCATGGAAAAG 57.058 43.478 18.20 18.54 0.00 2.27
2733 6532 4.443598 CCTCTACTAGTCCATGGAAAAGCC 60.444 50.000 18.20 3.21 37.10 4.35
2819 6618 9.974750 TTTAAAACGTTCATGGATTTGAAAAAC 57.025 25.926 0.00 0.00 37.36 2.43
2825 6624 8.356657 ACGTTCATGGATTTGAAAAACTATTCA 58.643 29.630 0.00 0.00 37.36 2.57
2833 6633 9.134734 GGATTTGAAAAACTATTCACGCATTTA 57.865 29.630 0.00 0.00 38.95 1.40
2928 6728 8.530269 AACGTCCAGTAGTCTTTAAAATGTAG 57.470 34.615 0.00 0.00 0.00 2.74
2931 6731 7.331193 CGTCCAGTAGTCTTTAAAATGTAGCTT 59.669 37.037 0.00 0.00 0.00 3.74
2966 6766 7.708051 TCCAAATTTTGAATGAAGTACGAACA 58.292 30.769 10.72 0.00 0.00 3.18
3058 6926 4.705337 AAAACCAAGTGAAAACTACGCA 57.295 36.364 0.00 0.00 0.00 5.24
3071 6939 9.601971 GTGAAAACTACGCATAGAATACAAAAA 57.398 29.630 0.00 0.00 32.23 1.94
3121 6989 8.494016 AACCTTATAGAAGATTCTCAAAACCG 57.506 34.615 0.00 0.00 38.70 4.44
3122 6990 7.848128 ACCTTATAGAAGATTCTCAAAACCGA 58.152 34.615 0.00 0.00 38.70 4.69
3123 6991 8.319146 ACCTTATAGAAGATTCTCAAAACCGAA 58.681 33.333 0.00 0.00 38.70 4.30
3124 6992 9.162764 CCTTATAGAAGATTCTCAAAACCGAAA 57.837 33.333 0.00 0.00 38.70 3.46
3126 6994 7.979444 ATAGAAGATTCTCAAAACCGAAACA 57.021 32.000 0.00 0.00 38.70 2.83
3127 6995 6.061231 AGAAGATTCTCAAAACCGAAACAC 57.939 37.500 0.00 0.00 29.94 3.32
3129 6997 3.568430 AGATTCTCAAAACCGAAACACCC 59.432 43.478 0.00 0.00 0.00 4.61
3130 6998 1.682740 TCTCAAAACCGAAACACCCC 58.317 50.000 0.00 0.00 0.00 4.95
3131 6999 1.064611 TCTCAAAACCGAAACACCCCA 60.065 47.619 0.00 0.00 0.00 4.96
3132 7000 1.751924 CTCAAAACCGAAACACCCCAA 59.248 47.619 0.00 0.00 0.00 4.12
3133 7001 2.364002 CTCAAAACCGAAACACCCCAAT 59.636 45.455 0.00 0.00 0.00 3.16
3134 7002 3.563223 TCAAAACCGAAACACCCCAATA 58.437 40.909 0.00 0.00 0.00 1.90
3135 7003 3.318557 TCAAAACCGAAACACCCCAATAC 59.681 43.478 0.00 0.00 0.00 1.89
3136 7004 2.660670 AACCGAAACACCCCAATACA 57.339 45.000 0.00 0.00 0.00 2.29
3137 7005 2.891191 ACCGAAACACCCCAATACAT 57.109 45.000 0.00 0.00 0.00 2.29
3138 7006 3.163616 ACCGAAACACCCCAATACATT 57.836 42.857 0.00 0.00 0.00 2.71
3150 7891 5.012239 CCCCAATACATTCATATGGACTGG 58.988 45.833 2.13 0.00 36.01 4.00
3152 7893 4.460382 CCAATACATTCATATGGACTGGCC 59.540 45.833 2.13 0.00 36.01 5.36
3154 7895 3.219176 ACATTCATATGGACTGGCCTG 57.781 47.619 8.29 8.29 36.01 4.85
3155 7896 2.511218 ACATTCATATGGACTGGCCTGT 59.489 45.455 16.10 16.10 36.01 4.00
3156 7897 3.053395 ACATTCATATGGACTGGCCTGTT 60.053 43.478 17.25 3.65 36.01 3.16
3157 7898 3.281727 TTCATATGGACTGGCCTGTTC 57.718 47.619 17.25 15.61 37.63 3.18
3159 7900 1.134401 CATATGGACTGGCCTGTTCGT 60.134 52.381 18.86 18.86 37.63 3.85
3160 7901 0.981183 TATGGACTGGCCTGTTCGTT 59.019 50.000 19.93 10.67 37.63 3.85
3161 7902 0.321653 ATGGACTGGCCTGTTCGTTC 60.322 55.000 17.25 3.31 37.63 3.95
3162 7903 1.671379 GGACTGGCCTGTTCGTTCC 60.671 63.158 17.25 9.10 0.00 3.62
3163 7904 1.070786 GACTGGCCTGTTCGTTCCA 59.929 57.895 17.25 0.00 0.00 3.53
3164 7905 0.534203 GACTGGCCTGTTCGTTCCAA 60.534 55.000 17.25 0.00 0.00 3.53
3165 7906 0.535102 ACTGGCCTGTTCGTTCCAAG 60.535 55.000 9.88 0.00 0.00 3.61
3168 7909 1.072505 GCCTGTTCGTTCCAAGGGA 59.927 57.895 0.00 0.00 0.00 4.20
3169 7910 1.235281 GCCTGTTCGTTCCAAGGGAC 61.235 60.000 0.00 0.00 0.00 4.46
3172 7913 0.107831 TGTTCGTTCCAAGGGACTGG 59.892 55.000 0.00 0.00 40.86 4.00
3174 7915 2.725203 TTCGTTCCAAGGGACTGGCG 62.725 60.000 0.00 0.00 40.86 5.69
3175 7916 3.056328 GTTCCAAGGGACTGGCGC 61.056 66.667 0.00 0.00 40.86 6.53
3176 7917 4.344865 TTCCAAGGGACTGGCGCC 62.345 66.667 22.73 22.73 40.86 6.53
3178 7919 4.659172 CCAAGGGACTGGCGCCAA 62.659 66.667 32.09 14.57 40.86 4.52
3181 7922 0.679640 CAAGGGACTGGCGCCAAATA 60.680 55.000 32.09 7.42 40.86 1.40
3182 7923 0.394352 AAGGGACTGGCGCCAAATAG 60.394 55.000 32.09 21.22 40.86 1.73
3184 7925 1.823899 GGACTGGCGCCAAATAGGG 60.824 63.158 32.09 20.02 38.09 3.53
3212 7953 1.087771 GCCGTCCCCACAGTAATTCG 61.088 60.000 0.00 0.00 0.00 3.34
3252 9132 0.630478 AATGGGGGAGGCTTATGGGT 60.630 55.000 0.00 0.00 0.00 4.51
3253 9133 1.068352 ATGGGGGAGGCTTATGGGTC 61.068 60.000 0.00 0.00 0.00 4.46
3282 9162 7.169158 TGAGAAGCCCAAATAAATTAGGTTG 57.831 36.000 0.00 0.00 0.00 3.77
3310 9190 4.670765 AGAGGTCTTACGGGAGAAGTTTA 58.329 43.478 0.00 0.00 0.00 2.01
3315 9195 5.279657 GGTCTTACGGGAGAAGTTTAGGAAA 60.280 44.000 0.00 0.00 0.00 3.13
3316 9196 6.226052 GTCTTACGGGAGAAGTTTAGGAAAA 58.774 40.000 0.00 0.00 0.00 2.29
3319 9199 4.895961 ACGGGAGAAGTTTAGGAAAAGAG 58.104 43.478 0.00 0.00 0.00 2.85
3320 9200 4.591924 ACGGGAGAAGTTTAGGAAAAGAGA 59.408 41.667 0.00 0.00 0.00 3.10
3322 9202 6.174049 CGGGAGAAGTTTAGGAAAAGAGAAT 58.826 40.000 0.00 0.00 0.00 2.40
3323 9203 6.314152 CGGGAGAAGTTTAGGAAAAGAGAATC 59.686 42.308 0.00 0.00 0.00 2.52
3324 9204 6.600032 GGGAGAAGTTTAGGAAAAGAGAATCC 59.400 42.308 0.00 0.00 33.66 3.01
3326 9206 7.551262 GGAGAAGTTTAGGAAAAGAGAATCCTC 59.449 40.741 0.00 0.00 42.44 3.71
3327 9207 7.398829 AGAAGTTTAGGAAAAGAGAATCCTCC 58.601 38.462 0.00 0.00 42.44 4.30
3328 9208 6.068461 AGTTTAGGAAAAGAGAATCCTCCC 57.932 41.667 0.00 0.00 42.44 4.30
3329 9209 5.793237 AGTTTAGGAAAAGAGAATCCTCCCT 59.207 40.000 0.00 0.00 42.44 4.20
3330 9210 5.959583 TTAGGAAAAGAGAATCCTCCCTC 57.040 43.478 0.00 0.00 42.44 4.30
3331 9211 2.769095 AGGAAAAGAGAATCCTCCCTCG 59.231 50.000 0.00 0.00 42.44 4.63
3332 9212 2.766828 GGAAAAGAGAATCCTCCCTCGA 59.233 50.000 0.00 0.00 40.30 4.04
3333 9213 3.197983 GGAAAAGAGAATCCTCCCTCGAA 59.802 47.826 0.00 0.00 40.30 3.71
3334 9214 4.438148 GAAAAGAGAATCCTCCCTCGAAG 58.562 47.826 0.00 0.00 40.30 3.79
3335 9215 3.390175 AAGAGAATCCTCCCTCGAAGA 57.610 47.619 0.00 0.00 40.30 2.87
3336 9216 3.390175 AGAGAATCCTCCCTCGAAGAA 57.610 47.619 0.00 0.00 40.30 2.52
3337 9217 3.714144 AGAGAATCCTCCCTCGAAGAAA 58.286 45.455 0.00 0.00 40.30 2.52
3338 9218 4.097418 AGAGAATCCTCCCTCGAAGAAAA 58.903 43.478 0.00 0.00 40.30 2.29
3339 9219 4.532521 AGAGAATCCTCCCTCGAAGAAAAA 59.467 41.667 0.00 0.00 40.30 1.94
3365 9245 4.092821 TCAAAAGAAGAATCCGTACATGCG 59.907 41.667 0.00 0.00 0.00 4.73
3382 9262 0.098728 GCGACGCTGTAATGCCAAAT 59.901 50.000 13.73 0.00 0.00 2.32
3383 9263 1.329292 GCGACGCTGTAATGCCAAATA 59.671 47.619 13.73 0.00 0.00 1.40
3384 9264 2.849502 GCGACGCTGTAATGCCAAATAC 60.850 50.000 13.73 0.00 0.00 1.89
3385 9265 2.607635 CGACGCTGTAATGCCAAATACT 59.392 45.455 0.00 0.00 0.00 2.12
3386 9266 3.302480 CGACGCTGTAATGCCAAATACTC 60.302 47.826 0.00 0.00 0.00 2.59
3387 9267 2.943033 ACGCTGTAATGCCAAATACTCC 59.057 45.455 0.00 0.00 0.00 3.85
3388 9268 2.290641 CGCTGTAATGCCAAATACTCCC 59.709 50.000 0.00 0.00 0.00 4.30
3389 9269 3.287222 GCTGTAATGCCAAATACTCCCA 58.713 45.455 0.00 0.00 0.00 4.37
3390 9270 3.699038 GCTGTAATGCCAAATACTCCCAA 59.301 43.478 0.00 0.00 0.00 4.12
3391 9271 4.159506 GCTGTAATGCCAAATACTCCCAAA 59.840 41.667 0.00 0.00 0.00 3.28
3392 9272 5.163416 GCTGTAATGCCAAATACTCCCAAAT 60.163 40.000 0.00 0.00 0.00 2.32
3393 9273 6.219417 TGTAATGCCAAATACTCCCAAATG 57.781 37.500 0.00 0.00 0.00 2.32
3394 9274 5.719085 TGTAATGCCAAATACTCCCAAATGT 59.281 36.000 0.00 0.00 0.00 2.71
3395 9275 5.760484 AATGCCAAATACTCCCAAATGTT 57.240 34.783 0.00 0.00 0.00 2.71
3396 9276 6.865834 AATGCCAAATACTCCCAAATGTTA 57.134 33.333 0.00 0.00 0.00 2.41
3397 9277 5.652994 TGCCAAATACTCCCAAATGTTAC 57.347 39.130 0.00 0.00 0.00 2.50
3398 9278 4.464597 TGCCAAATACTCCCAAATGTTACC 59.535 41.667 0.00 0.00 0.00 2.85
3399 9279 4.464597 GCCAAATACTCCCAAATGTTACCA 59.535 41.667 0.00 0.00 0.00 3.25
3400 9280 5.128663 GCCAAATACTCCCAAATGTTACCAT 59.871 40.000 0.00 0.00 0.00 3.55
3401 9281 6.351796 GCCAAATACTCCCAAATGTTACCATT 60.352 38.462 0.00 0.00 43.14 3.16
3412 9292 5.982890 AATGTTACCATTTGGAGGACAAG 57.017 39.130 3.01 0.00 38.10 3.16
3413 9293 4.447138 TGTTACCATTTGGAGGACAAGT 57.553 40.909 3.01 0.00 40.82 3.16
3414 9294 5.570205 TGTTACCATTTGGAGGACAAGTA 57.430 39.130 3.01 0.00 40.82 2.24
3415 9295 6.134535 TGTTACCATTTGGAGGACAAGTAT 57.865 37.500 3.01 0.00 40.82 2.12
3416 9296 6.548321 TGTTACCATTTGGAGGACAAGTATT 58.452 36.000 3.01 0.00 40.82 1.89
3417 9297 7.007723 TGTTACCATTTGGAGGACAAGTATTT 58.992 34.615 3.01 0.00 40.82 1.40
3418 9298 7.175990 TGTTACCATTTGGAGGACAAGTATTTC 59.824 37.037 3.01 0.00 40.82 2.17
3419 9299 5.016831 ACCATTTGGAGGACAAGTATTTCC 58.983 41.667 3.01 0.00 40.82 3.13
3420 9300 4.096382 CCATTTGGAGGACAAGTATTTCCG 59.904 45.833 0.00 0.00 40.82 4.30
3421 9301 3.343941 TTGGAGGACAAGTATTTCCGG 57.656 47.619 0.00 0.00 36.95 5.14
3422 9302 2.542550 TGGAGGACAAGTATTTCCGGA 58.457 47.619 0.00 0.00 36.95 5.14
3423 9303 2.500098 TGGAGGACAAGTATTTCCGGAG 59.500 50.000 3.34 0.00 36.95 4.63
3424 9304 6.143986 TTGGAGGACAAGTATTTCCGGAGG 62.144 50.000 3.34 0.00 41.88 4.30
3456 9336 0.538287 ACTTGAACCCTTGCAGCTCC 60.538 55.000 0.00 0.00 0.00 4.70
3475 9355 1.871676 CCATCGTCTCAATGCATGGAG 59.128 52.381 23.22 23.22 36.84 3.86
3505 9385 5.941948 AAACAGTGAAGCATGTACCTTAC 57.058 39.130 0.00 0.00 0.00 2.34
3536 9416 5.885352 TCCTGTGACAGAAAAACAATCTCAA 59.115 36.000 15.33 0.00 32.44 3.02
3538 9418 7.068593 TCCTGTGACAGAAAAACAATCTCAAAT 59.931 33.333 15.33 0.00 32.44 2.32
3540 9420 9.734620 CTGTGACAGAAAAACAATCTCAAATAA 57.265 29.630 6.79 0.00 32.44 1.40
3541 9421 9.515020 TGTGACAGAAAAACAATCTCAAATAAC 57.485 29.630 0.00 0.00 0.00 1.89
3542 9422 9.736023 GTGACAGAAAAACAATCTCAAATAACT 57.264 29.630 0.00 0.00 0.00 2.24
3565 9445 1.128809 TTTTCCCCAGTGAGGCGGTA 61.129 55.000 0.00 0.00 35.39 4.02
3607 9487 3.094062 GCACCTCGCCTGCCAGATA 62.094 63.158 0.00 0.00 32.94 1.98
3619 9499 1.065926 TGCCAGATACTTGACCTGCTG 60.066 52.381 0.00 0.00 0.00 4.41
3808 9688 3.706373 AGCGTCCTCCGTGCCAAT 61.706 61.111 0.00 0.00 39.32 3.16
3811 9691 1.153369 CGTCCTCCGTGCCAATGAT 60.153 57.895 0.00 0.00 0.00 2.45
3939 9819 1.134965 GGTGACCAGCAGTGCTAGTAG 60.135 57.143 19.26 9.57 36.40 2.57
3998 9878 6.944234 GCAGTTAAAGCCAGATTATAAGGT 57.056 37.500 0.00 0.00 0.00 3.50
3999 9879 7.334844 GCAGTTAAAGCCAGATTATAAGGTT 57.665 36.000 0.00 0.00 0.00 3.50
4000 9880 8.446599 GCAGTTAAAGCCAGATTATAAGGTTA 57.553 34.615 0.00 0.00 0.00 2.85
4016 9896 3.722147 AGGTTATATGTTGAGCTGAGCG 58.278 45.455 0.00 0.00 0.00 5.03
4029 9909 1.129437 GCTGAGCGTGAATTGTTCTCC 59.871 52.381 0.00 0.00 0.00 3.71
4032 9912 2.003301 GAGCGTGAATTGTTCTCCCTC 58.997 52.381 0.00 0.00 0.00 4.30
4151 10031 4.354212 CGGCGTTGCACGAGTGTG 62.354 66.667 11.94 0.00 46.05 3.82
4292 10172 1.616865 TCAAAGTCGTCGGTGAAGGAT 59.383 47.619 0.00 0.00 0.00 3.24
4333 10213 9.956640 ACAAGAAAGACAAATGAATCTCTATCT 57.043 29.630 0.00 0.00 0.00 1.98
4378 10258 7.962995 ACATTATATATCACTCGAGGGATGT 57.037 36.000 35.16 31.05 0.00 3.06
4426 10306 3.800863 GCGAGGAGAGACGCGACA 61.801 66.667 15.93 0.00 44.91 4.35
4608 10495 8.306313 TGAGGAGATATACGTAATATGCCATT 57.694 34.615 0.00 0.00 30.53 3.16
4654 10541 6.211384 CCAGTGGGAAAATAAGGAGAAAATGT 59.789 38.462 0.00 0.00 35.59 2.71
4717 10605 7.138054 ACCTTCTATAAGAAACCATGTAGGG 57.862 40.000 0.00 0.00 36.89 3.53
4718 10606 6.906901 ACCTTCTATAAGAAACCATGTAGGGA 59.093 38.462 0.00 0.00 36.89 4.20
4719 10607 7.404980 ACCTTCTATAAGAAACCATGTAGGGAA 59.595 37.037 0.00 0.00 36.89 3.97
4789 10705 2.314549 TCCCCCTGAACCTTGCAAATAT 59.685 45.455 0.00 0.00 0.00 1.28
4806 10722 8.969260 TGCAAATATCAAAGTCATCTCATACT 57.031 30.769 0.00 0.00 0.00 2.12
4814 10730 8.948631 TCAAAGTCATCTCATACTAATTCCAC 57.051 34.615 0.00 0.00 0.00 4.02
4842 10759 8.463930 ACTTATTTGTGGAATGAAGAACTTGA 57.536 30.769 0.00 0.00 0.00 3.02
4949 10870 8.924303 GGGGAATAAAATACTTTTAGAGCCATT 58.076 33.333 0.00 0.00 38.40 3.16
4957 10878 7.751768 ATACTTTTAGAGCCATTCATAAGCC 57.248 36.000 0.00 0.00 0.00 4.35
5033 10959 7.815383 TCTTCATAGATAATGATGGGTGGTTT 58.185 34.615 0.00 0.00 44.13 3.27
5039 10965 6.467677 AGATAATGATGGGTGGTTTCTATCG 58.532 40.000 0.00 0.00 0.00 2.92
5047 10973 3.118371 GGGTGGTTTCTATCGACCAATCT 60.118 47.826 0.00 0.00 46.73 2.40
5176 11104 4.657436 ATATGTCTTCTCGACTTCCCAC 57.343 45.455 0.00 0.00 43.25 4.61
5178 11106 2.036387 TGTCTTCTCGACTTCCCACAA 58.964 47.619 0.00 0.00 43.25 3.33
5181 11109 3.875134 GTCTTCTCGACTTCCCACAAAAA 59.125 43.478 0.00 0.00 39.61 1.94
5239 11167 5.668991 CCATGATCTAGGATTATGGGGATCA 59.331 44.000 17.96 0.00 42.01 2.92
5242 11170 7.020827 TGATCTAGGATTATGGGGATCAAAC 57.979 40.000 0.00 0.00 37.30 2.93
5290 11218 8.694540 CCAACCATGGTCATATCTTGATTTTTA 58.305 33.333 20.07 0.00 42.18 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.934023 ACAAAGAGATCCCTGTGTTTTTAATA 57.066 30.769 0.00 0.00 30.74 0.98
4 5 7.839680 ACAAAGAGATCCCTGTGTTTTTAAT 57.160 32.000 0.00 0.00 30.74 1.40
6 7 8.934023 ATTACAAAGAGATCCCTGTGTTTTTA 57.066 30.769 5.25 0.00 36.17 1.52
7 8 7.839680 ATTACAAAGAGATCCCTGTGTTTTT 57.160 32.000 5.25 0.00 36.17 1.94
8 9 8.934023 TTATTACAAAGAGATCCCTGTGTTTT 57.066 30.769 5.25 0.00 36.17 2.43
9 10 8.960591 CATTATTACAAAGAGATCCCTGTGTTT 58.039 33.333 5.25 0.00 36.17 2.83
10 11 7.067494 GCATTATTACAAAGAGATCCCTGTGTT 59.933 37.037 5.25 0.00 36.17 3.32
11 12 6.543831 GCATTATTACAAAGAGATCCCTGTGT 59.456 38.462 5.29 5.29 38.17 3.72
12 13 6.016777 GGCATTATTACAAAGAGATCCCTGTG 60.017 42.308 0.00 0.00 0.00 3.66
13 14 6.064717 GGCATTATTACAAAGAGATCCCTGT 58.935 40.000 0.00 0.00 0.00 4.00
14 15 5.180117 CGGCATTATTACAAAGAGATCCCTG 59.820 44.000 0.00 0.00 0.00 4.45
15 16 5.308825 CGGCATTATTACAAAGAGATCCCT 58.691 41.667 0.00 0.00 0.00 4.20
16 17 4.083271 GCGGCATTATTACAAAGAGATCCC 60.083 45.833 0.00 0.00 0.00 3.85
17 18 4.377431 CGCGGCATTATTACAAAGAGATCC 60.377 45.833 0.00 0.00 0.00 3.36
18 19 4.447724 TCGCGGCATTATTACAAAGAGATC 59.552 41.667 6.13 0.00 0.00 2.75
19 20 4.211374 GTCGCGGCATTATTACAAAGAGAT 59.789 41.667 5.47 0.00 0.00 2.75
20 21 3.554324 GTCGCGGCATTATTACAAAGAGA 59.446 43.478 5.47 0.00 0.00 3.10
21 22 3.601586 CGTCGCGGCATTATTACAAAGAG 60.602 47.826 12.89 0.00 0.00 2.85
22 23 2.283086 CGTCGCGGCATTATTACAAAGA 59.717 45.455 12.89 0.00 0.00 2.52
23 24 2.283086 TCGTCGCGGCATTATTACAAAG 59.717 45.455 12.89 0.00 0.00 2.77
24 25 2.269172 TCGTCGCGGCATTATTACAAA 58.731 42.857 12.89 0.00 0.00 2.83
25 26 1.923899 TCGTCGCGGCATTATTACAA 58.076 45.000 12.89 0.00 0.00 2.41
26 27 1.790043 CATCGTCGCGGCATTATTACA 59.210 47.619 12.89 0.00 0.00 2.41
27 28 2.055838 TCATCGTCGCGGCATTATTAC 58.944 47.619 12.89 0.00 0.00 1.89
28 29 2.425578 TCATCGTCGCGGCATTATTA 57.574 45.000 12.89 0.00 0.00 0.98
29 30 1.577468 TTCATCGTCGCGGCATTATT 58.423 45.000 12.89 0.00 0.00 1.40
30 31 1.795768 ATTCATCGTCGCGGCATTAT 58.204 45.000 12.89 0.00 0.00 1.28
31 32 1.525197 GAATTCATCGTCGCGGCATTA 59.475 47.619 12.89 0.00 0.00 1.90
32 33 0.304705 GAATTCATCGTCGCGGCATT 59.695 50.000 12.89 1.41 0.00 3.56
33 34 1.821241 CGAATTCATCGTCGCGGCAT 61.821 55.000 12.89 0.00 46.52 4.40
34 35 2.513157 CGAATTCATCGTCGCGGCA 61.513 57.895 12.89 0.00 46.52 5.69
35 36 2.242670 CGAATTCATCGTCGCGGC 59.757 61.111 6.13 1.93 46.52 6.53
43 44 4.116238 GGGTTGAGTCTCTCGAATTCATC 58.884 47.826 6.22 0.00 32.35 2.92
44 45 3.429547 CGGGTTGAGTCTCTCGAATTCAT 60.430 47.826 6.22 0.00 32.35 2.57
45 46 2.094700 CGGGTTGAGTCTCTCGAATTCA 60.095 50.000 6.22 0.00 32.35 2.57
46 47 2.094649 ACGGGTTGAGTCTCTCGAATTC 60.095 50.000 13.31 0.00 32.35 2.17
47 48 1.893801 ACGGGTTGAGTCTCTCGAATT 59.106 47.619 13.31 0.00 32.35 2.17
48 49 1.202582 CACGGGTTGAGTCTCTCGAAT 59.797 52.381 13.31 0.00 32.35 3.34
49 50 0.596577 CACGGGTTGAGTCTCTCGAA 59.403 55.000 13.31 0.00 32.35 3.71
50 51 1.863662 GCACGGGTTGAGTCTCTCGA 61.864 60.000 13.31 0.00 32.35 4.04
51 52 1.444553 GCACGGGTTGAGTCTCTCG 60.445 63.158 0.65 6.62 32.35 4.04
52 53 0.318762 AAGCACGGGTTGAGTCTCTC 59.681 55.000 0.65 0.00 0.00 3.20
53 54 0.759346 AAAGCACGGGTTGAGTCTCT 59.241 50.000 0.65 0.00 0.00 3.10
54 55 2.450609 TAAAGCACGGGTTGAGTCTC 57.549 50.000 0.00 0.00 0.00 3.36
55 56 3.418684 AATAAAGCACGGGTTGAGTCT 57.581 42.857 0.00 0.00 0.00 3.24
56 57 5.813080 AATAATAAAGCACGGGTTGAGTC 57.187 39.130 0.00 0.00 0.00 3.36
57 58 5.820947 CCTAATAATAAAGCACGGGTTGAGT 59.179 40.000 0.00 0.00 0.00 3.41
58 59 5.238650 CCCTAATAATAAAGCACGGGTTGAG 59.761 44.000 0.00 0.00 0.00 3.02
59 60 5.104444 TCCCTAATAATAAAGCACGGGTTGA 60.104 40.000 0.00 0.00 0.00 3.18
60 61 5.127491 TCCCTAATAATAAAGCACGGGTTG 58.873 41.667 0.00 0.00 0.00 3.77
61 62 5.376756 TCCCTAATAATAAAGCACGGGTT 57.623 39.130 0.00 0.00 0.00 4.11
62 63 5.376756 TTCCCTAATAATAAAGCACGGGT 57.623 39.130 0.00 0.00 0.00 5.28
63 64 6.017357 GTCTTTCCCTAATAATAAAGCACGGG 60.017 42.308 0.00 0.00 0.00 5.28
64 65 6.766467 AGTCTTTCCCTAATAATAAAGCACGG 59.234 38.462 0.00 0.00 0.00 4.94
65 66 7.787725 AGTCTTTCCCTAATAATAAAGCACG 57.212 36.000 0.00 0.00 0.00 5.34
80 81 9.832445 TGTCATCATAATAACTAAGTCTTTCCC 57.168 33.333 0.00 0.00 0.00 3.97
87 88 9.784531 CCAAGGATGTCATCATAATAACTAAGT 57.215 33.333 14.72 0.00 34.06 2.24
88 89 8.725148 GCCAAGGATGTCATCATAATAACTAAG 58.275 37.037 14.72 0.00 34.06 2.18
141 142 2.703007 CAGCTAGGCAGGGTAAGAGAAT 59.297 50.000 0.00 0.00 0.00 2.40
145 146 1.273041 TGTCAGCTAGGCAGGGTAAGA 60.273 52.381 0.00 0.00 0.00 2.10
184 185 8.557029 AGCAAGGCTTATAACGATAAAACATAC 58.443 33.333 0.00 0.00 33.89 2.39
197 198 6.420913 CCTAGGAAGTAGCAAGGCTTATAA 57.579 41.667 1.05 0.00 40.44 0.98
215 696 4.597507 TGGTCAGGGATTTATTAGCCTAGG 59.402 45.833 3.67 3.67 0.00 3.02
266 747 6.371548 GTGGATGTACATGAGCTCTAAAACAA 59.628 38.462 14.43 0.00 0.00 2.83
316 799 4.451900 CCATAACAGAAGGGGATGTGTAC 58.548 47.826 0.00 0.00 0.00 2.90
319 802 2.936202 CCCATAACAGAAGGGGATGTG 58.064 52.381 0.00 0.00 43.57 3.21
325 808 3.981212 ACAATTCCCCATAACAGAAGGG 58.019 45.455 0.00 0.00 42.44 3.95
326 809 6.040842 CCATAACAATTCCCCATAACAGAAGG 59.959 42.308 0.00 0.00 0.00 3.46
327 810 6.833416 TCCATAACAATTCCCCATAACAGAAG 59.167 38.462 0.00 0.00 0.00 2.85
328 811 6.736581 TCCATAACAATTCCCCATAACAGAA 58.263 36.000 0.00 0.00 0.00 3.02
330 813 7.436118 CAATCCATAACAATTCCCCATAACAG 58.564 38.462 0.00 0.00 0.00 3.16
354 837 3.631250 AGCCTCTTGAAAGAAACAACCA 58.369 40.909 0.00 0.00 34.03 3.67
355 838 5.767816 TTAGCCTCTTGAAAGAAACAACC 57.232 39.130 0.00 0.00 34.03 3.77
356 839 7.203218 ACAATTAGCCTCTTGAAAGAAACAAC 58.797 34.615 0.00 0.00 34.03 3.32
358 841 6.959639 ACAATTAGCCTCTTGAAAGAAACA 57.040 33.333 0.00 0.00 34.03 2.83
359 842 8.648557 AAAACAATTAGCCTCTTGAAAGAAAC 57.351 30.769 0.00 0.00 34.03 2.78
430 914 6.792473 TCTGGGGTTCATAGATGGTATTACAT 59.208 38.462 0.00 0.00 0.00 2.29
446 930 3.922171 AGAGTCAATGATCTGGGGTTC 57.078 47.619 0.00 0.00 0.00 3.62
447 931 4.536090 TGTAAGAGTCAATGATCTGGGGTT 59.464 41.667 0.00 0.00 0.00 4.11
449 933 4.760530 TGTAAGAGTCAATGATCTGGGG 57.239 45.455 0.00 0.00 0.00 4.96
462 946 6.174049 GCCTCTCTTTTATGGTTGTAAGAGT 58.826 40.000 0.00 0.00 42.54 3.24
465 949 5.501156 AGGCCTCTCTTTTATGGTTGTAAG 58.499 41.667 0.00 0.00 0.00 2.34
466 950 5.514500 AGGCCTCTCTTTTATGGTTGTAA 57.486 39.130 0.00 0.00 0.00 2.41
469 953 3.119352 GCAAGGCCTCTCTTTTATGGTTG 60.119 47.826 5.23 0.00 0.00 3.77
534 1200 7.120923 TGGTGTTAGAATAACTAGATGACCC 57.879 40.000 0.00 0.00 32.30 4.46
556 1222 2.358737 GTGAAGACACGGCCCTGG 60.359 66.667 6.69 0.00 37.28 4.45
570 1236 5.588246 TCTGTGCTTATTTGTTGACAAGTGA 59.412 36.000 2.58 0.00 37.15 3.41
639 1305 5.156355 GCCGTCGTATATTTTCTATTCCGA 58.844 41.667 0.00 0.00 0.00 4.55
640 1306 4.325472 GGCCGTCGTATATTTTCTATTCCG 59.675 45.833 0.00 0.00 0.00 4.30
684 1350 7.177921 CGGGGATGATTAGAACCAGTTATACTA 59.822 40.741 0.00 0.00 0.00 1.82
685 1351 6.014499 CGGGGATGATTAGAACCAGTTATACT 60.014 42.308 0.00 0.00 0.00 2.12
689 1356 4.100498 GTCGGGGATGATTAGAACCAGTTA 59.900 45.833 0.00 0.00 0.00 2.24
713 1380 6.592994 GGCTAAACCGTCTGATTAGTTTAGTT 59.407 38.462 23.30 3.90 46.89 2.24
736 1404 2.024176 TGTCTTTGCTCTAATCGGGC 57.976 50.000 0.00 0.00 0.00 6.13
853 1521 2.681064 GAGCTTGCAATGGGGGCA 60.681 61.111 0.00 0.00 40.00 5.36
893 1561 2.270850 GTGCTCCAATGGCGGGTA 59.729 61.111 0.00 0.00 0.00 3.69
919 1587 4.673061 CGGTGTTGTGTTATTTGTGTGTGT 60.673 41.667 0.00 0.00 0.00 3.72
942 1610 2.093658 TGAGCTGATCGGACCTTTTACC 60.094 50.000 5.48 0.00 0.00 2.85
945 1619 1.677217 GCTGAGCTGATCGGACCTTTT 60.677 52.381 5.48 0.00 36.25 2.27
946 1620 0.107945 GCTGAGCTGATCGGACCTTT 60.108 55.000 5.48 0.00 36.25 3.11
1003 1677 3.709633 TGCTGCAGAGGACGCCAT 61.710 61.111 20.43 0.00 0.00 4.40
1142 1819 2.353435 CTTGAAGAATCCGCGCTCGC 62.353 60.000 5.56 3.90 37.85 5.03
1152 1829 1.202879 TGGTTGACCGCCTTGAAGAAT 60.203 47.619 0.00 0.00 39.43 2.40
1398 2075 4.065110 GGGCCATACCTGAATCGC 57.935 61.111 4.39 0.00 39.10 4.58
1425 2102 0.892755 AAAGGGACACTGCATGCATG 59.107 50.000 22.97 22.70 0.00 4.06
1475 2152 6.437928 TCCGAGAACAAAGAAACAATGAATG 58.562 36.000 0.00 0.00 0.00 2.67
1498 2175 2.529151 CAACCAAACAATATGCCGCTC 58.471 47.619 0.00 0.00 0.00 5.03
1550 2227 3.798889 GCGGATTTTAATTAAGGGCTGCC 60.799 47.826 11.05 11.05 0.00 4.85
1552 2229 3.383185 TGGCGGATTTTAATTAAGGGCTG 59.617 43.478 0.00 0.00 0.00 4.85
1554 2231 4.202212 ACATGGCGGATTTTAATTAAGGGC 60.202 41.667 0.00 0.00 0.00 5.19
1555 2232 5.068460 TGACATGGCGGATTTTAATTAAGGG 59.932 40.000 0.00 0.00 0.00 3.95
1556 2233 6.142818 TGACATGGCGGATTTTAATTAAGG 57.857 37.500 0.00 0.00 0.00 2.69
1557 2234 7.254084 GCTTTGACATGGCGGATTTTAATTAAG 60.254 37.037 0.00 0.00 0.00 1.85
1558 2235 6.533367 GCTTTGACATGGCGGATTTTAATTAA 59.467 34.615 0.00 0.00 0.00 1.40
1559 2236 6.039616 GCTTTGACATGGCGGATTTTAATTA 58.960 36.000 0.00 0.00 0.00 1.40
1560 2237 4.869861 GCTTTGACATGGCGGATTTTAATT 59.130 37.500 0.00 0.00 0.00 1.40
1561 2238 4.160252 AGCTTTGACATGGCGGATTTTAAT 59.840 37.500 0.00 0.00 0.00 1.40
1589 2287 6.918892 TGTACAATCATTTGCTATAGCGTT 57.081 33.333 19.55 4.26 45.83 4.84
1591 2289 7.575365 TCATTGTACAATCATTTGCTATAGCG 58.425 34.615 18.25 5.67 45.83 4.26
1603 2301 8.672815 TCGCTAAATGAAATCATTGTACAATCA 58.327 29.630 18.25 13.90 45.06 2.57
1613 2311 6.485984 AGCAATCTCTCGCTAAATGAAATCAT 59.514 34.615 0.00 0.00 36.50 2.45
1615 2313 6.018425 TGAGCAATCTCTCGCTAAATGAAATC 60.018 38.462 0.00 0.00 38.99 2.17
1616 2314 5.819379 TGAGCAATCTCTCGCTAAATGAAAT 59.181 36.000 0.00 0.00 38.99 2.17
1617 2315 5.178061 TGAGCAATCTCTCGCTAAATGAAA 58.822 37.500 0.00 0.00 38.99 2.69
1620 2318 4.366586 TCTGAGCAATCTCTCGCTAAATG 58.633 43.478 0.00 0.00 38.99 2.32
1621 2319 4.662468 TCTGAGCAATCTCTCGCTAAAT 57.338 40.909 0.00 0.00 38.99 1.40
1622 2320 4.177026 GTTCTGAGCAATCTCTCGCTAAA 58.823 43.478 0.00 0.00 38.99 1.85
1625 2323 1.468908 CGTTCTGAGCAATCTCTCGCT 60.469 52.381 0.00 0.00 42.42 4.93
1626 2324 0.919981 CGTTCTGAGCAATCTCTCGC 59.080 55.000 0.00 0.00 40.03 5.03
1627 2325 0.919981 GCGTTCTGAGCAATCTCTCG 59.080 55.000 0.00 0.00 40.03 4.04
1628 2326 2.292103 AGCGTTCTGAGCAATCTCTC 57.708 50.000 0.00 0.00 40.03 3.20
1629 2327 4.558496 GCTATAGCGTTCTGAGCAATCTCT 60.558 45.833 9.40 0.00 40.03 3.10
1630 2328 3.672867 GCTATAGCGTTCTGAGCAATCTC 59.327 47.826 9.40 0.00 39.78 2.75
1631 2329 3.648009 GCTATAGCGTTCTGAGCAATCT 58.352 45.455 9.40 0.00 34.55 2.40
1649 2347 1.151777 GCGCCACAAATAGCTCGCTA 61.152 55.000 0.00 0.53 39.51 4.26
1654 2352 2.417719 GCTATAGCGCCACAAATAGCT 58.582 47.619 20.15 0.00 42.20 3.32
1686 2384 5.269991 AGTACCAGGAGTATTAAGCACTCA 58.730 41.667 17.31 0.00 43.50 3.41
1687 2385 5.595133 AGAGTACCAGGAGTATTAAGCACTC 59.405 44.000 10.25 10.25 41.43 3.51
1696 2394 4.838986 ACACAACAAGAGTACCAGGAGTAT 59.161 41.667 0.00 0.00 32.28 2.12
1698 2396 3.039011 ACACAACAAGAGTACCAGGAGT 58.961 45.455 0.00 0.00 0.00 3.85
1733 2431 8.549338 AACTTGAGATGCAGTATCATCATATG 57.451 34.615 0.91 0.00 43.94 1.78
1734 2432 9.570468 AAAACTTGAGATGCAGTATCATCATAT 57.430 29.630 0.91 0.00 43.94 1.78
1782 2480 9.011095 CATGCAGAGATTAAGATATGGTGAAAT 57.989 33.333 0.00 0.00 0.00 2.17
1791 2489 6.169094 GCTTAGCCATGCAGAGATTAAGATA 58.831 40.000 0.00 0.00 0.00 1.98
1795 2493 3.133691 CGCTTAGCCATGCAGAGATTAA 58.866 45.455 0.00 0.00 0.00 1.40
1796 2494 2.365293 TCGCTTAGCCATGCAGAGATTA 59.635 45.455 0.00 0.00 0.00 1.75
1809 2507 2.210961 GGAGGTGGTATTTCGCTTAGC 58.789 52.381 0.00 0.00 0.00 3.09
1812 2510 3.366052 AATGGAGGTGGTATTTCGCTT 57.634 42.857 0.00 0.00 0.00 4.68
1830 2528 9.561069 ACTACACAGTAAGTCATTTCTGAAAAT 57.439 29.630 6.95 0.00 32.16 1.82
1831 2529 8.958119 ACTACACAGTAAGTCATTTCTGAAAA 57.042 30.769 6.95 0.00 31.45 2.29
1841 2539 7.201723 TCGTAAGTTTGACTACACAGTAAGTCA 60.202 37.037 12.04 12.04 43.81 3.41
1854 2552 6.980051 AAAGTTTCTGTCGTAAGTTTGACT 57.020 33.333 8.76 0.00 36.10 3.41
1855 2553 8.598075 TCTAAAAGTTTCTGTCGTAAGTTTGAC 58.402 33.333 0.00 1.98 39.48 3.18
1856 2554 8.706492 TCTAAAAGTTTCTGTCGTAAGTTTGA 57.294 30.769 0.00 0.00 39.48 2.69
1857 2555 9.207042 GTTCTAAAAGTTTCTGTCGTAAGTTTG 57.793 33.333 0.00 0.00 39.48 2.93
1858 2556 9.159364 AGTTCTAAAAGTTTCTGTCGTAAGTTT 57.841 29.630 0.00 0.00 39.48 2.66
1859 2557 8.713737 AGTTCTAAAAGTTTCTGTCGTAAGTT 57.286 30.769 0.00 0.00 39.48 2.66
1907 2624 7.539022 ACGACATGTCTAATGCTATTATTCTCG 59.461 37.037 22.95 6.80 0.00 4.04
1912 2629 9.494271 AAATCACGACATGTCTAATGCTATTAT 57.506 29.630 22.95 5.82 0.00 1.28
1974 2692 2.031682 GCGTCATGTGCTTTGACTCTTT 60.032 45.455 10.89 0.00 41.05 2.52
1975 2693 1.532868 GCGTCATGTGCTTTGACTCTT 59.467 47.619 10.89 0.00 41.05 2.85
1976 2694 1.151668 GCGTCATGTGCTTTGACTCT 58.848 50.000 10.89 0.00 41.05 3.24
1977 2695 0.166814 GGCGTCATGTGCTTTGACTC 59.833 55.000 11.43 4.82 41.05 3.36
1978 2696 1.568612 CGGCGTCATGTGCTTTGACT 61.569 55.000 0.00 0.00 41.05 3.41
1979 2697 1.154413 CGGCGTCATGTGCTTTGAC 60.154 57.895 0.00 4.73 40.06 3.18
1981 2699 0.726827 ATACGGCGTCATGTGCTTTG 59.273 50.000 19.21 5.90 0.00 2.77
1982 2700 2.303163 TATACGGCGTCATGTGCTTT 57.697 45.000 19.21 0.00 0.00 3.51
1983 2701 2.303163 TTATACGGCGTCATGTGCTT 57.697 45.000 19.21 0.00 0.00 3.91
1984 2702 2.303163 TTTATACGGCGTCATGTGCT 57.697 45.000 19.21 0.00 0.00 4.40
1985 2703 3.247648 AGATTTTATACGGCGTCATGTGC 59.752 43.478 19.21 1.84 0.00 4.57
2001 2722 7.543172 TCGTACGTAGCTGATGTTTTAGATTTT 59.457 33.333 16.05 0.00 0.00 1.82
2069 2790 9.337396 AGAATTCTTATTGGCATTATCGTACAA 57.663 29.630 0.88 0.00 0.00 2.41
2070 2791 8.902540 AGAATTCTTATTGGCATTATCGTACA 57.097 30.769 0.88 0.00 0.00 2.90
2071 2792 8.988934 TGAGAATTCTTATTGGCATTATCGTAC 58.011 33.333 9.87 0.00 0.00 3.67
2081 2802 4.038402 CCCACCATGAGAATTCTTATTGGC 59.962 45.833 22.42 7.22 0.00 4.52
2091 2812 3.122480 TGATACCACCCACCATGAGAAT 58.878 45.455 0.00 0.00 0.00 2.40
2196 2917 8.224389 TGTTGGTATCATGTCATGAAATAAGG 57.776 34.615 19.17 0.00 43.50 2.69
2209 2930 7.201767 GGAAAAAGAGAGGATGTTGGTATCATG 60.202 40.741 0.00 0.00 0.00 3.07
2216 2937 4.655963 TGAGGAAAAAGAGAGGATGTTGG 58.344 43.478 0.00 0.00 0.00 3.77
2244 2965 2.081526 GTGCTCACACGCCATACTG 58.918 57.895 0.00 0.00 36.98 2.74
2280 3001 6.491714 ACTGTTTATGATGTAGCCTCATCT 57.508 37.500 16.15 7.59 43.03 2.90
2281 3002 6.540189 ACAACTGTTTATGATGTAGCCTCATC 59.460 38.462 10.57 10.57 42.95 2.92
2284 3005 5.874810 TGACAACTGTTTATGATGTAGCCTC 59.125 40.000 0.00 0.00 0.00 4.70
2320 3043 4.411927 ACATGACTTAGACCTCACTCAGT 58.588 43.478 0.00 0.00 0.00 3.41
2321 3044 6.707440 ATACATGACTTAGACCTCACTCAG 57.293 41.667 0.00 0.00 0.00 3.35
2389 3113 5.813383 ACTGAACTCCTGTGATTCATGAAT 58.187 37.500 20.85 20.85 32.16 2.57
2390 3114 5.233083 ACTGAACTCCTGTGATTCATGAA 57.767 39.130 11.26 11.26 32.16 2.57
2400 3124 9.739276 TTGAATCATAAAATACTGAACTCCTGT 57.261 29.630 0.00 0.00 0.00 4.00
2433 3159 1.003812 ACTTGGCGCCATGTAGGTTAA 59.996 47.619 38.14 17.79 40.61 2.01
2453 3179 2.358619 CGCCCTTCCCCCAATCAA 59.641 61.111 0.00 0.00 0.00 2.57
2470 3196 3.606346 CGTATCAAACACGGAAAAATGGC 59.394 43.478 0.00 0.00 35.78 4.40
2541 3267 8.904099 AGTTTGCAGTAATTAGAACACTAAGT 57.096 30.769 0.00 0.00 31.05 2.24
2579 3305 9.230122 AGAAACAATTGTGTCCTTTGAATTTTT 57.770 25.926 22.62 3.85 36.80 1.94
2606 3332 3.012518 CTGGACAAAGCACTATTGGAGG 58.987 50.000 0.00 0.00 32.02 4.30
2607 3333 3.679389 ACTGGACAAAGCACTATTGGAG 58.321 45.455 0.00 0.00 32.02 3.86
2609 3335 3.612479 GCAACTGGACAAAGCACTATTGG 60.612 47.826 0.00 0.00 32.02 3.16
2611 3337 2.558359 GGCAACTGGACAAAGCACTATT 59.442 45.455 0.00 0.00 0.00 1.73
2636 6435 2.375766 GCCAACGAGTGTGAGCGAG 61.376 63.158 0.00 0.00 0.00 5.03
2639 6438 2.320587 CCAGCCAACGAGTGTGAGC 61.321 63.158 0.00 0.00 0.00 4.26
2645 6444 0.818040 GACCAAACCAGCCAACGAGT 60.818 55.000 0.00 0.00 0.00 4.18
2649 6448 2.335011 GCGACCAAACCAGCCAAC 59.665 61.111 0.00 0.00 0.00 3.77
2660 6459 3.282745 GAGCGAGTCAAGGCGACCA 62.283 63.158 0.00 0.00 46.69 4.02
2701 6500 5.899631 TGGACTAGTAGAGGTTGGTTTTT 57.100 39.130 3.59 0.00 0.00 1.94
2753 6552 9.979578 TTTTAGAATGTGCACATTATTCTTTGT 57.020 25.926 37.90 20.39 45.72 2.83
2767 6566 8.970691 ATATGTGAACAGTTTTTAGAATGTGC 57.029 30.769 0.00 0.00 0.00 4.57
2795 6594 8.934507 AGTTTTTCAAATCCATGAACGTTTTA 57.065 26.923 0.46 0.00 38.95 1.52
2800 6599 8.638565 GTGAATAGTTTTTCAAATCCATGAACG 58.361 33.333 0.00 0.00 38.95 3.95
2905 6705 6.812160 AGCTACATTTTAAAGACTACTGGACG 59.188 38.462 0.00 0.00 0.00 4.79
3037 6905 4.705337 TGCGTAGTTTTCACTTGGTTTT 57.295 36.364 0.00 0.00 34.06 2.43
3039 6907 5.302360 TCTATGCGTAGTTTTCACTTGGTT 58.698 37.500 12.66 0.00 34.06 3.67
3045 6913 9.601971 TTTTTGTATTCTATGCGTAGTTTTCAC 57.398 29.630 12.66 6.07 0.00 3.18
3054 6922 8.732746 ACCTTATCTTTTTGTATTCTATGCGT 57.267 30.769 0.00 0.00 0.00 5.24
3071 6939 6.030082 TCCCTGGTTTTTCTCTACCTTATCT 58.970 40.000 0.00 0.00 35.41 1.98
3103 6971 6.204108 GGTGTTTCGGTTTTGAGAATCTTCTA 59.796 38.462 0.00 0.00 37.73 2.10
3104 6972 5.008712 GGTGTTTCGGTTTTGAGAATCTTCT 59.991 40.000 0.00 0.00 41.00 2.85
3105 6973 5.212934 GGTGTTTCGGTTTTGAGAATCTTC 58.787 41.667 0.00 0.00 34.92 2.87
3106 6974 4.037565 GGGTGTTTCGGTTTTGAGAATCTT 59.962 41.667 0.00 0.00 34.92 2.40
3107 6975 3.568430 GGGTGTTTCGGTTTTGAGAATCT 59.432 43.478 0.00 0.00 34.92 2.40
3109 6977 2.626266 GGGGTGTTTCGGTTTTGAGAAT 59.374 45.455 0.00 0.00 0.00 2.40
3110 6978 2.025898 GGGGTGTTTCGGTTTTGAGAA 58.974 47.619 0.00 0.00 0.00 2.87
3111 6979 1.064611 TGGGGTGTTTCGGTTTTGAGA 60.065 47.619 0.00 0.00 0.00 3.27
3112 6980 1.394618 TGGGGTGTTTCGGTTTTGAG 58.605 50.000 0.00 0.00 0.00 3.02
3116 6984 2.946785 TGTATTGGGGTGTTTCGGTTT 58.053 42.857 0.00 0.00 0.00 3.27
3120 6988 4.981806 ATGAATGTATTGGGGTGTTTCG 57.018 40.909 0.00 0.00 0.00 3.46
3121 6989 6.549364 TCCATATGAATGTATTGGGGTGTTTC 59.451 38.462 3.65 0.00 0.00 2.78
3122 6990 6.323739 GTCCATATGAATGTATTGGGGTGTTT 59.676 38.462 3.65 0.00 0.00 2.83
3123 6991 5.833131 GTCCATATGAATGTATTGGGGTGTT 59.167 40.000 3.65 0.00 0.00 3.32
3124 6992 5.134339 AGTCCATATGAATGTATTGGGGTGT 59.866 40.000 3.65 0.00 0.00 4.16
3126 6994 5.458069 CCAGTCCATATGAATGTATTGGGGT 60.458 44.000 3.65 0.00 37.36 4.95
3127 6995 5.012239 CCAGTCCATATGAATGTATTGGGG 58.988 45.833 3.65 0.00 37.36 4.96
3129 6997 4.460382 GGCCAGTCCATATGAATGTATTGG 59.540 45.833 3.65 3.57 37.36 3.16
3130 6998 5.182570 CAGGCCAGTCCATATGAATGTATTG 59.817 44.000 5.01 0.00 37.36 1.90
3131 6999 5.163055 ACAGGCCAGTCCATATGAATGTATT 60.163 40.000 5.01 0.00 37.36 1.89
3132 7000 4.352001 ACAGGCCAGTCCATATGAATGTAT 59.648 41.667 5.01 0.00 37.36 2.29
3133 7001 3.716353 ACAGGCCAGTCCATATGAATGTA 59.284 43.478 5.01 0.00 37.36 2.29
3134 7002 2.511218 ACAGGCCAGTCCATATGAATGT 59.489 45.455 5.01 0.00 37.36 2.71
3135 7003 3.219176 ACAGGCCAGTCCATATGAATG 57.781 47.619 5.01 0.23 38.77 2.67
3136 7004 3.745480 CGAACAGGCCAGTCCATATGAAT 60.745 47.826 5.01 0.00 37.29 2.57
3137 7005 2.419990 CGAACAGGCCAGTCCATATGAA 60.420 50.000 5.01 0.00 37.29 2.57
3138 7006 1.138859 CGAACAGGCCAGTCCATATGA 59.861 52.381 5.01 0.00 37.29 2.15
3150 7891 1.072505 TCCCTTGGAACGAACAGGC 59.927 57.895 0.00 0.00 0.00 4.85
3152 7893 1.512926 CAGTCCCTTGGAACGAACAG 58.487 55.000 0.00 0.00 31.38 3.16
3154 7895 1.235281 GCCAGTCCCTTGGAACGAAC 61.235 60.000 0.00 0.00 40.87 3.95
3155 7896 1.072505 GCCAGTCCCTTGGAACGAA 59.927 57.895 0.00 0.00 40.87 3.85
3156 7897 2.747686 GCCAGTCCCTTGGAACGA 59.252 61.111 0.00 0.00 40.87 3.85
3157 7898 2.742372 CGCCAGTCCCTTGGAACG 60.742 66.667 0.00 0.00 40.87 3.95
3159 7900 4.344865 GGCGCCAGTCCCTTGGAA 62.345 66.667 24.80 0.00 40.87 3.53
3161 7902 4.659172 TTGGCGCCAGTCCCTTGG 62.659 66.667 30.75 0.00 41.35 3.61
3162 7903 0.679640 TATTTGGCGCCAGTCCCTTG 60.680 55.000 30.75 0.00 0.00 3.61
3163 7904 0.394352 CTATTTGGCGCCAGTCCCTT 60.394 55.000 30.75 13.84 0.00 3.95
3164 7905 1.224592 CTATTTGGCGCCAGTCCCT 59.775 57.895 30.75 15.45 0.00 4.20
3165 7906 1.823899 CCTATTTGGCGCCAGTCCC 60.824 63.158 30.75 0.00 0.00 4.46
3168 7909 2.440247 GCCCTATTTGGCGCCAGT 60.440 61.111 30.75 23.86 42.54 4.00
3175 7916 2.793831 CCACGAAGGCCCTATTTGG 58.206 57.895 0.00 0.00 0.00 3.28
3204 7945 2.029380 GCCAAAGCCCAAACGAATTACT 60.029 45.455 0.00 0.00 0.00 2.24
3205 7946 2.333926 GCCAAAGCCCAAACGAATTAC 58.666 47.619 0.00 0.00 0.00 1.89
3253 9133 9.971922 CCTAATTTATTTGGGCTTCTCAATTAG 57.028 33.333 0.00 0.00 34.70 1.73
3286 9166 2.025898 CTTCTCCCGTAAGACCTCTCC 58.974 57.143 0.00 0.00 43.02 3.71
3291 9171 3.766051 TCCTAAACTTCTCCCGTAAGACC 59.234 47.826 0.00 0.00 43.02 3.85
3293 9173 6.268387 TCTTTTCCTAAACTTCTCCCGTAAGA 59.732 38.462 0.00 0.00 43.02 2.10
3298 9178 5.148651 TCTCTTTTCCTAAACTTCTCCCG 57.851 43.478 0.00 0.00 0.00 5.14
3310 9190 2.769095 CGAGGGAGGATTCTCTTTTCCT 59.231 50.000 0.00 0.00 45.12 3.36
3315 9195 3.390175 TCTTCGAGGGAGGATTCTCTT 57.610 47.619 0.00 0.00 39.86 2.85
3316 9196 3.390175 TTCTTCGAGGGAGGATTCTCT 57.610 47.619 0.00 0.00 39.86 3.10
3336 9216 7.992008 TGTACGGATTCTTCTTTTGACTTTTT 58.008 30.769 0.00 0.00 0.00 1.94
3337 9217 7.562454 TGTACGGATTCTTCTTTTGACTTTT 57.438 32.000 0.00 0.00 0.00 2.27
3338 9218 7.584987 CATGTACGGATTCTTCTTTTGACTTT 58.415 34.615 0.00 0.00 0.00 2.66
3339 9219 6.348540 GCATGTACGGATTCTTCTTTTGACTT 60.349 38.462 0.00 0.00 0.00 3.01
3340 9220 5.122396 GCATGTACGGATTCTTCTTTTGACT 59.878 40.000 0.00 0.00 0.00 3.41
3341 9221 5.324697 GCATGTACGGATTCTTCTTTTGAC 58.675 41.667 0.00 0.00 0.00 3.18
3342 9222 4.092821 CGCATGTACGGATTCTTCTTTTGA 59.907 41.667 0.00 0.00 0.00 2.69
3343 9223 4.092821 TCGCATGTACGGATTCTTCTTTTG 59.907 41.667 0.00 0.00 0.00 2.44
3344 9224 4.092968 GTCGCATGTACGGATTCTTCTTTT 59.907 41.667 0.00 0.00 0.00 2.27
3345 9225 3.617263 GTCGCATGTACGGATTCTTCTTT 59.383 43.478 0.00 0.00 0.00 2.52
3346 9226 3.187700 GTCGCATGTACGGATTCTTCTT 58.812 45.455 0.00 0.00 0.00 2.52
3347 9227 2.794981 CGTCGCATGTACGGATTCTTCT 60.795 50.000 13.03 0.00 36.71 2.85
3348 9228 1.517276 CGTCGCATGTACGGATTCTTC 59.483 52.381 13.03 0.00 36.71 2.87
3349 9229 1.556564 CGTCGCATGTACGGATTCTT 58.443 50.000 13.03 0.00 36.71 2.52
3350 9230 0.870307 GCGTCGCATGTACGGATTCT 60.870 55.000 13.44 0.00 40.64 2.40
3351 9231 0.870307 AGCGTCGCATGTACGGATTC 60.870 55.000 21.09 7.20 40.64 2.52
3352 9232 1.141019 AGCGTCGCATGTACGGATT 59.859 52.632 21.09 0.00 40.64 3.01
3353 9233 1.588932 CAGCGTCGCATGTACGGAT 60.589 57.895 21.09 0.00 40.64 4.18
3354 9234 1.646624 TACAGCGTCGCATGTACGGA 61.647 55.000 21.09 3.33 40.64 4.69
3355 9235 0.799152 TTACAGCGTCGCATGTACGG 60.799 55.000 21.09 9.84 40.64 4.02
3356 9236 1.072154 CATTACAGCGTCGCATGTACG 60.072 52.381 21.09 15.62 43.12 3.67
3357 9237 1.332028 GCATTACAGCGTCGCATGTAC 60.332 52.381 21.09 9.36 31.83 2.90
3358 9238 0.927537 GCATTACAGCGTCGCATGTA 59.072 50.000 21.09 19.82 0.00 2.29
3365 9245 3.002348 GGAGTATTTGGCATTACAGCGTC 59.998 47.826 9.83 0.88 34.64 5.19
3393 9273 7.362660 GGAAATACTTGTCCTCCAAATGGTAAC 60.363 40.741 0.00 0.00 36.34 2.50
3394 9274 6.661805 GGAAATACTTGTCCTCCAAATGGTAA 59.338 38.462 0.00 0.00 36.34 2.85
3395 9275 6.184789 GGAAATACTTGTCCTCCAAATGGTA 58.815 40.000 0.00 0.00 36.34 3.25
3396 9276 5.016831 GGAAATACTTGTCCTCCAAATGGT 58.983 41.667 0.00 0.00 36.34 3.55
3397 9277 4.096382 CGGAAATACTTGTCCTCCAAATGG 59.904 45.833 0.00 0.00 31.20 3.16
3398 9278 4.096382 CCGGAAATACTTGTCCTCCAAATG 59.904 45.833 0.00 0.00 31.20 2.32
3399 9279 4.018779 TCCGGAAATACTTGTCCTCCAAAT 60.019 41.667 0.00 0.00 31.20 2.32
3400 9280 3.328343 TCCGGAAATACTTGTCCTCCAAA 59.672 43.478 0.00 0.00 31.20 3.28
3401 9281 2.907696 TCCGGAAATACTTGTCCTCCAA 59.092 45.455 0.00 0.00 0.00 3.53
3402 9282 2.500098 CTCCGGAAATACTTGTCCTCCA 59.500 50.000 5.23 0.00 0.00 3.86
3403 9283 2.158943 CCTCCGGAAATACTTGTCCTCC 60.159 54.545 5.23 0.00 0.00 4.30
3404 9284 2.158943 CCCTCCGGAAATACTTGTCCTC 60.159 54.545 5.23 0.00 0.00 3.71
3405 9285 1.838077 CCCTCCGGAAATACTTGTCCT 59.162 52.381 5.23 0.00 0.00 3.85
3406 9286 1.835531 TCCCTCCGGAAATACTTGTCC 59.164 52.381 5.23 0.00 34.19 4.02
3407 9287 2.158943 CCTCCCTCCGGAAATACTTGTC 60.159 54.545 5.23 0.00 37.86 3.18
3408 9288 1.838077 CCTCCCTCCGGAAATACTTGT 59.162 52.381 5.23 0.00 37.86 3.16
3409 9289 1.141053 CCCTCCCTCCGGAAATACTTG 59.859 57.143 5.23 0.00 37.86 3.16
3410 9290 1.009183 TCCCTCCCTCCGGAAATACTT 59.991 52.381 5.23 0.00 37.86 2.24
3411 9291 0.640495 TCCCTCCCTCCGGAAATACT 59.360 55.000 5.23 0.00 37.86 2.12
3412 9292 1.049402 CTCCCTCCCTCCGGAAATAC 58.951 60.000 5.23 0.00 37.86 1.89
3413 9293 0.640495 ACTCCCTCCCTCCGGAAATA 59.360 55.000 5.23 0.00 37.86 1.40
3414 9294 0.640495 TACTCCCTCCCTCCGGAAAT 59.360 55.000 5.23 0.00 37.86 2.17
3415 9295 0.640495 ATACTCCCTCCCTCCGGAAA 59.360 55.000 5.23 0.00 37.86 3.13
3416 9296 0.187851 GATACTCCCTCCCTCCGGAA 59.812 60.000 5.23 0.00 37.86 4.30
3417 9297 0.701659 AGATACTCCCTCCCTCCGGA 60.702 60.000 2.93 2.93 36.45 5.14
3418 9298 1.073931 TAGATACTCCCTCCCTCCGG 58.926 60.000 0.00 0.00 0.00 5.14
3419 9299 1.706305 AGTAGATACTCCCTCCCTCCG 59.294 57.143 0.00 0.00 0.00 4.63
3420 9300 3.140519 TCAAGTAGATACTCCCTCCCTCC 59.859 52.174 0.00 0.00 34.99 4.30
3421 9301 4.456662 TCAAGTAGATACTCCCTCCCTC 57.543 50.000 0.00 0.00 34.99 4.30
3422 9302 4.548669 GTTCAAGTAGATACTCCCTCCCT 58.451 47.826 0.00 0.00 34.99 4.20
3423 9303 3.642377 GGTTCAAGTAGATACTCCCTCCC 59.358 52.174 0.00 0.00 34.99 4.30
3424 9304 3.642377 GGGTTCAAGTAGATACTCCCTCC 59.358 52.174 7.08 3.00 35.09 4.30
3425 9305 4.548669 AGGGTTCAAGTAGATACTCCCTC 58.451 47.826 10.00 0.00 40.86 4.30
3426 9306 4.628661 AGGGTTCAAGTAGATACTCCCT 57.371 45.455 10.00 10.00 40.32 4.20
3427 9307 4.683671 GCAAGGGTTCAAGTAGATACTCCC 60.684 50.000 6.44 6.44 37.06 4.30
3428 9308 4.081087 TGCAAGGGTTCAAGTAGATACTCC 60.081 45.833 0.00 0.00 34.99 3.85
3429 9309 5.086104 TGCAAGGGTTCAAGTAGATACTC 57.914 43.478 0.00 0.00 34.99 2.59
3430 9310 4.624125 GCTGCAAGGGTTCAAGTAGATACT 60.624 45.833 0.00 0.00 38.39 2.12
3431 9311 3.623510 GCTGCAAGGGTTCAAGTAGATAC 59.376 47.826 0.00 0.00 0.00 2.24
3456 9336 2.543012 GTCTCCATGCATTGAGACGATG 59.457 50.000 32.94 9.85 45.57 3.84
3475 9355 3.082698 TGCTTCACTGTTTTGCATGTC 57.917 42.857 0.00 0.00 0.00 3.06
3505 9385 3.371102 TTTCTGTCACAGGAGACGAAG 57.629 47.619 4.57 0.00 41.41 3.79
3552 9432 0.736325 CTCGTTTACCGCCTCACTGG 60.736 60.000 0.00 0.00 36.19 4.00
3593 9473 0.461548 TCAAGTATCTGGCAGGCGAG 59.538 55.000 15.73 0.00 0.00 5.03
3595 9475 0.811616 GGTCAAGTATCTGGCAGGCG 60.812 60.000 15.73 0.00 0.00 5.52
3607 9487 2.738213 CTTCGCCCAGCAGGTCAAGT 62.738 60.000 0.00 0.00 38.26 3.16
3766 9646 3.302347 CTGTGGGTCGGAGTGCTCC 62.302 68.421 8.14 8.14 46.18 4.70
3808 9688 1.153309 CTGCAGGCCATCGACATCA 60.153 57.895 5.01 0.00 0.00 3.07
3811 9691 3.321648 ACCTGCAGGCCATCGACA 61.322 61.111 33.06 0.00 39.32 4.35
3924 9804 3.885901 TCAGATACTACTAGCACTGCTGG 59.114 47.826 14.15 13.33 42.85 4.85
3926 9806 4.339814 GGTTCAGATACTACTAGCACTGCT 59.660 45.833 8.95 8.95 43.41 4.24
3984 9864 8.669243 GCTCAACATATAACCTTATAATCTGGC 58.331 37.037 0.00 0.00 0.00 4.85
3985 9865 9.950496 AGCTCAACATATAACCTTATAATCTGG 57.050 33.333 0.00 0.00 0.00 3.86
3991 9871 7.090808 CGCTCAGCTCAACATATAACCTTATA 58.909 38.462 0.00 0.00 0.00 0.98
3992 9872 5.928839 CGCTCAGCTCAACATATAACCTTAT 59.071 40.000 0.00 0.00 0.00 1.73
3995 9875 3.133003 ACGCTCAGCTCAACATATAACCT 59.867 43.478 0.00 0.00 0.00 3.50
3996 9876 3.246226 CACGCTCAGCTCAACATATAACC 59.754 47.826 0.00 0.00 0.00 2.85
3997 9877 4.112634 TCACGCTCAGCTCAACATATAAC 58.887 43.478 0.00 0.00 0.00 1.89
3998 9878 4.385358 TCACGCTCAGCTCAACATATAA 57.615 40.909 0.00 0.00 0.00 0.98
3999 9879 4.385358 TTCACGCTCAGCTCAACATATA 57.615 40.909 0.00 0.00 0.00 0.86
4000 9880 2.967599 TCACGCTCAGCTCAACATAT 57.032 45.000 0.00 0.00 0.00 1.78
4013 9893 1.625818 AGAGGGAGAACAATTCACGCT 59.374 47.619 5.49 5.49 43.88 5.07
4016 9896 5.523369 CAAAACAGAGGGAGAACAATTCAC 58.477 41.667 0.00 0.00 0.00 3.18
4032 9912 2.582728 TGTCAAAGCCTGCAAAACAG 57.417 45.000 0.00 0.00 46.77 3.16
4151 10031 4.200283 CTCTGGGAGCGCCGAGAC 62.200 72.222 17.03 0.00 43.17 3.36
4204 10084 0.035820 TGTATTCCGCCCAGGTGAAC 60.036 55.000 0.00 0.00 41.99 3.18
4292 10172 5.417266 TCTTTCTTGTTTCACATCAACCACA 59.583 36.000 0.00 0.00 0.00 4.17
4366 10246 1.254026 TTCGTTCACATCCCTCGAGT 58.746 50.000 12.31 0.00 32.39 4.18
4369 10249 1.134818 TCCATTCGTTCACATCCCTCG 60.135 52.381 0.00 0.00 0.00 4.63
4370 10250 2.280628 GTCCATTCGTTCACATCCCTC 58.719 52.381 0.00 0.00 0.00 4.30
4608 10495 5.030820 TGGGTTTTTGGGAAGGAGTTTTTA 58.969 37.500 0.00 0.00 0.00 1.52
4789 10705 8.762645 AGTGGAATTAGTATGAGATGACTTTGA 58.237 33.333 0.00 0.00 0.00 2.69
4825 10742 7.913674 AAGTCTATCAAGTTCTTCATTCCAC 57.086 36.000 0.00 0.00 0.00 4.02
4949 10870 8.405531 GTTATAAAGAGCAACATTGGCTTATGA 58.594 33.333 7.09 0.00 42.78 2.15
4952 10873 6.889722 AGGTTATAAAGAGCAACATTGGCTTA 59.110 34.615 0.00 0.00 42.78 3.09
4954 10875 5.126061 CAGGTTATAAAGAGCAACATTGGCT 59.874 40.000 0.00 0.00 46.07 4.75
4955 10876 5.105756 ACAGGTTATAAAGAGCAACATTGGC 60.106 40.000 0.00 0.00 0.00 4.52
4957 10878 7.383102 AGACAGGTTATAAAGAGCAACATTG 57.617 36.000 0.00 0.00 0.00 2.82
5039 10965 6.183360 TGTTGAAAGTTCAAGTGAGATTGGTC 60.183 38.462 6.72 0.00 46.80 4.02
5176 11104 5.168526 TCGAATGAAGGTGTGACTTTTTG 57.831 39.130 0.00 0.00 0.00 2.44
5178 11106 3.815401 CCTCGAATGAAGGTGTGACTTTT 59.185 43.478 0.00 0.00 0.00 2.27
5181 11109 2.232452 CTCCTCGAATGAAGGTGTGACT 59.768 50.000 0.00 0.00 0.00 3.41
5239 11167 7.394359 GGATATTGTGATGCTGGGTATATGTTT 59.606 37.037 0.00 0.00 0.00 2.83
5242 11170 6.417258 TGGATATTGTGATGCTGGGTATATG 58.583 40.000 0.00 0.00 0.00 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.