Multiple sequence alignment - TraesCS7A01G448700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G448700 chr7A 100.000 4119 0 0 1 4119 642937891 642942009 0.000000e+00 7607
1 TraesCS7A01G448700 chr7A 87.699 943 105 9 951 1888 642899135 642900071 0.000000e+00 1088
2 TraesCS7A01G448700 chr7A 86.567 603 74 3 2634 3230 642900751 642901352 0.000000e+00 658
3 TraesCS7A01G448700 chr7A 90.251 359 24 6 1921 2279 642900075 642900422 3.750000e-125 459
4 TraesCS7A01G448700 chr7A 92.188 256 20 0 1 256 437074634 437074379 3.030000e-96 363
5 TraesCS7A01G448700 chr7A 87.500 120 14 1 759 877 595072417 595072536 2.000000e-28 137
6 TraesCS7A01G448700 chr7A 90.123 81 6 1 3762 3840 642900720 642900800 2.030000e-18 104
7 TraesCS7A01G448700 chr7B 96.957 2760 80 2 873 3628 605420134 605422893 0.000000e+00 4628
8 TraesCS7A01G448700 chr7B 84.764 1037 112 16 2011 3042 605424374 605425369 0.000000e+00 998
9 TraesCS7A01G448700 chr7B 91.278 493 26 6 3628 4119 605424844 605425320 0.000000e+00 656
10 TraesCS7A01G448700 chr7B 87.963 540 65 0 1022 1561 605098430 605098969 4.490000e-179 638
11 TraesCS7A01G448700 chr7B 81.620 778 99 20 2579 3339 605102685 605103435 4.550000e-169 604
12 TraesCS7A01G448700 chr7B 91.136 361 30 1 1921 2279 605102036 605102396 4.790000e-134 488
13 TraesCS7A01G448700 chr7B 86.427 361 49 0 2339 2699 605102490 605102850 2.980000e-106 396
14 TraesCS7A01G448700 chr7B 79.461 594 76 23 3075 3626 605425369 605425958 3.010000e-101 379
15 TraesCS7A01G448700 chr7B 92.188 256 20 0 1 256 721070810 721071065 3.030000e-96 363
16 TraesCS7A01G448700 chr7B 85.886 333 41 6 1557 1888 605101705 605102032 2.360000e-92 350
17 TraesCS7A01G448700 chr7B 87.220 313 23 6 918 1224 605089299 605089600 1.420000e-89 340
18 TraesCS7A01G448700 chr7B 80.285 421 45 14 312 712 605419678 605420080 2.420000e-72 283
19 TraesCS7A01G448700 chr7B 84.689 209 20 6 3629 3826 605102643 605102850 9.030000e-47 198
20 TraesCS7A01G448700 chr7B 91.549 142 9 1 888 1029 605089926 605090064 4.200000e-45 193
21 TraesCS7A01G448700 chr7B 89.916 119 12 0 760 878 383736244 383736126 1.980000e-33 154
22 TraesCS7A01G448700 chr7D 94.595 2775 91 15 898 3629 557397347 557400105 0.000000e+00 4239
23 TraesCS7A01G448700 chr7D 82.658 1678 172 44 2014 3624 557400502 557402127 0.000000e+00 1376
24 TraesCS7A01G448700 chr7D 83.300 1479 186 31 1930 3389 557782514 557781078 0.000000e+00 1306
25 TraesCS7A01G448700 chr7D 87.160 919 107 5 958 1870 557783433 557782520 0.000000e+00 1033
26 TraesCS7A01G448700 chr7D 82.571 1027 122 26 2579 3560 557346102 557347116 0.000000e+00 852
27 TraesCS7A01G448700 chr7D 84.606 799 99 14 1921 2699 557345473 557346267 0.000000e+00 773
28 TraesCS7A01G448700 chr7D 84.772 637 87 7 1253 1888 557344842 557345469 7.510000e-177 630
29 TraesCS7A01G448700 chr7D 87.205 508 33 9 3628 4119 557400962 557401453 2.160000e-152 549
30 TraesCS7A01G448700 chr7D 81.325 498 59 12 3629 4117 557346060 557346532 1.400000e-99 374
31 TraesCS7A01G448700 chr7D 94.512 164 6 1 888 1051 557380715 557380875 2.460000e-62 250
32 TraesCS7A01G448700 chr7D 87.500 120 14 1 760 878 388700127 388700008 2.000000e-28 137
33 TraesCS7A01G448700 chrUn 88.209 899 85 14 991 1888 86730134 86731012 0.000000e+00 1053
34 TraesCS7A01G448700 chrUn 84.615 546 69 3 2579 3109 86731665 86732210 2.820000e-146 529
35 TraesCS7A01G448700 chrUn 89.888 356 34 1 1926 2279 86731021 86731376 1.350000e-124 457
36 TraesCS7A01G448700 chrUn 86.150 361 50 0 2339 2699 86731470 86731830 1.390000e-104 390
37 TraesCS7A01G448700 chrUn 84.615 208 22 4 3629 3826 86731623 86731830 9.030000e-47 198
38 TraesCS7A01G448700 chr5A 74.307 1226 240 58 1078 2279 442276749 442277923 2.260000e-122 449
39 TraesCS7A01G448700 chr5A 88.696 115 13 0 760 874 446022570 446022456 1.540000e-29 141
40 TraesCS7A01G448700 chr3D 92.424 264 19 1 1 263 93478504 93478241 3.890000e-100 375
41 TraesCS7A01G448700 chr6D 93.227 251 16 1 1 251 303445842 303445593 6.500000e-98 368
42 TraesCS7A01G448700 chr2A 92.549 255 19 0 2 256 98897674 98897420 2.340000e-97 366
43 TraesCS7A01G448700 chr2A 86.777 121 16 0 762 882 747602421 747602301 7.180000e-28 135
44 TraesCS7A01G448700 chr4A 92.188 256 20 0 1 256 6819171 6819426 3.030000e-96 363
45 TraesCS7A01G448700 chr4A 92.218 257 18 2 1 256 16983818 16984073 3.030000e-96 363
46 TraesCS7A01G448700 chr2D 92.188 256 20 0 1 256 68920414 68920669 3.030000e-96 363
47 TraesCS7A01G448700 chr5B 92.218 257 17 3 1 256 671201358 671201612 1.090000e-95 361
48 TraesCS7A01G448700 chr3A 89.565 115 12 0 760 874 602271374 602271260 3.320000e-31 147
49 TraesCS7A01G448700 chr3A 87.500 120 15 0 760 879 607108068 607108187 5.550000e-29 139
50 TraesCS7A01G448700 chr5D 87.200 125 15 1 760 883 9494962 9494838 1.540000e-29 141
51 TraesCS7A01G448700 chr3B 86.885 122 16 0 762 883 545185447 545185568 2.000000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G448700 chr7A 642937891 642942009 4118 False 7607.000000 7607 100.000000 1 4119 1 chr7A.!!$F2 4118
1 TraesCS7A01G448700 chr7A 642899135 642901352 2217 False 577.250000 1088 88.660000 951 3840 4 chr7A.!!$F3 2889
2 TraesCS7A01G448700 chr7B 605419678 605425958 6280 False 1388.800000 4628 86.549000 312 4119 5 chr7B.!!$F4 3807
3 TraesCS7A01G448700 chr7B 605098430 605103435 5005 False 445.666667 638 86.286833 1022 3826 6 chr7B.!!$F3 2804
4 TraesCS7A01G448700 chr7B 605089299 605090064 765 False 266.500000 340 89.384500 888 1224 2 chr7B.!!$F2 336
5 TraesCS7A01G448700 chr7D 557397347 557402127 4780 False 2054.666667 4239 88.152667 898 4119 3 chr7D.!!$F3 3221
6 TraesCS7A01G448700 chr7D 557781078 557783433 2355 True 1169.500000 1306 85.230000 958 3389 2 chr7D.!!$R2 2431
7 TraesCS7A01G448700 chr7D 557344842 557347116 2274 False 657.250000 852 83.318500 1253 4117 4 chr7D.!!$F2 2864
8 TraesCS7A01G448700 chrUn 86730134 86732210 2076 False 525.400000 1053 86.695400 991 3826 5 chrUn.!!$F1 2835
9 TraesCS7A01G448700 chr5A 442276749 442277923 1174 False 449.000000 449 74.307000 1078 2279 1 chr5A.!!$F1 1201

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 300 0.031857 CTTGGAAAACATGCCACGCA 59.968 50.0 0.00 0.00 44.86 5.24 F
406 407 0.389025 TGCATGTCATCCTCGCGTAT 59.611 50.0 5.77 0.00 0.00 3.06 F
773 828 0.404426 TGAGTTCCCTCCGTCTGAGA 59.596 55.0 0.00 0.00 44.42 3.27 F
2401 5289 0.385029 ATTGTTGCTTGCGCTTGACA 59.615 45.0 9.73 3.72 36.97 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1538 1614 2.202676 CCTCGAGAGCGGTGAAGC 60.203 66.667 15.71 0.0 38.28 3.86 R
1785 4603 2.766229 TAGGCGGGCATGTAGGCA 60.766 61.111 3.78 0.0 46.44 4.75 R
2550 5447 1.337260 ACAAGTCGTCATCCAGCTCAC 60.337 52.381 0.00 0.0 0.00 3.51 R
3805 10728 0.260230 CCCTCTGACAGCTCCCTCTA 59.740 60.000 0.00 0.0 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.953669 CTTCATCTGCGGCAATTGC 58.046 52.632 22.47 22.47 41.14 3.56
19 20 0.454600 CTTCATCTGCGGCAATTGCT 59.545 50.000 28.42 6.07 41.70 3.91
27 28 3.287482 CGGCAATTGCTGTTTTGGT 57.713 47.368 27.82 0.00 42.29 3.67
28 29 0.860533 CGGCAATTGCTGTTTTGGTG 59.139 50.000 27.82 5.66 42.29 4.17
29 30 0.587768 GGCAATTGCTGTTTTGGTGC 59.412 50.000 28.42 5.36 41.70 5.01
30 31 0.232816 GCAATTGCTGTTTTGGTGCG 59.767 50.000 23.21 0.00 38.21 5.34
31 32 1.569708 CAATTGCTGTTTTGGTGCGT 58.430 45.000 0.00 0.00 0.00 5.24
32 33 1.932511 CAATTGCTGTTTTGGTGCGTT 59.067 42.857 0.00 0.00 0.00 4.84
33 34 1.569708 ATTGCTGTTTTGGTGCGTTG 58.430 45.000 0.00 0.00 0.00 4.10
34 35 0.459237 TTGCTGTTTTGGTGCGTTGG 60.459 50.000 0.00 0.00 0.00 3.77
35 36 1.140804 GCTGTTTTGGTGCGTTGGT 59.859 52.632 0.00 0.00 0.00 3.67
36 37 0.459411 GCTGTTTTGGTGCGTTGGTT 60.459 50.000 0.00 0.00 0.00 3.67
37 38 1.555477 CTGTTTTGGTGCGTTGGTTC 58.445 50.000 0.00 0.00 0.00 3.62
38 39 1.134175 CTGTTTTGGTGCGTTGGTTCT 59.866 47.619 0.00 0.00 0.00 3.01
39 40 2.356382 CTGTTTTGGTGCGTTGGTTCTA 59.644 45.455 0.00 0.00 0.00 2.10
40 41 2.952978 TGTTTTGGTGCGTTGGTTCTAT 59.047 40.909 0.00 0.00 0.00 1.98
41 42 3.243234 TGTTTTGGTGCGTTGGTTCTATG 60.243 43.478 0.00 0.00 0.00 2.23
42 43 1.529226 TTGGTGCGTTGGTTCTATGG 58.471 50.000 0.00 0.00 0.00 2.74
43 44 0.322098 TGGTGCGTTGGTTCTATGGG 60.322 55.000 0.00 0.00 0.00 4.00
44 45 1.029947 GGTGCGTTGGTTCTATGGGG 61.030 60.000 0.00 0.00 0.00 4.96
45 46 1.377987 TGCGTTGGTTCTATGGGGC 60.378 57.895 0.00 0.00 0.00 5.80
46 47 2.119029 GCGTTGGTTCTATGGGGCC 61.119 63.158 0.00 0.00 0.00 5.80
47 48 1.607612 CGTTGGTTCTATGGGGCCT 59.392 57.895 0.84 0.00 0.00 5.19
48 49 0.034477 CGTTGGTTCTATGGGGCCTT 60.034 55.000 0.84 0.00 0.00 4.35
49 50 1.210967 CGTTGGTTCTATGGGGCCTTA 59.789 52.381 0.84 0.00 0.00 2.69
50 51 2.745152 CGTTGGTTCTATGGGGCCTTAG 60.745 54.545 0.84 5.59 0.00 2.18
51 52 0.843984 TGGTTCTATGGGGCCTTAGC 59.156 55.000 0.84 0.00 38.76 3.09
52 53 0.843984 GGTTCTATGGGGCCTTAGCA 59.156 55.000 0.84 0.00 42.56 3.49
53 54 1.477014 GGTTCTATGGGGCCTTAGCAC 60.477 57.143 0.84 5.93 43.97 4.40
59 60 3.574780 GGGCCTTAGCACAACGAC 58.425 61.111 0.84 0.00 44.19 4.34
60 61 1.003718 GGGCCTTAGCACAACGACT 60.004 57.895 0.84 0.00 44.19 4.18
61 62 0.605589 GGGCCTTAGCACAACGACTT 60.606 55.000 0.84 0.00 44.19 3.01
62 63 1.235724 GGCCTTAGCACAACGACTTT 58.764 50.000 0.00 0.00 42.56 2.66
63 64 1.197036 GGCCTTAGCACAACGACTTTC 59.803 52.381 0.00 0.00 42.56 2.62
64 65 1.197036 GCCTTAGCACAACGACTTTCC 59.803 52.381 0.00 0.00 39.53 3.13
65 66 1.459592 CCTTAGCACAACGACTTTCCG 59.540 52.381 0.00 0.00 0.00 4.30
66 67 2.400399 CTTAGCACAACGACTTTCCGA 58.600 47.619 0.00 0.00 0.00 4.55
67 68 1.774639 TAGCACAACGACTTTCCGAC 58.225 50.000 0.00 0.00 0.00 4.79
68 69 0.104304 AGCACAACGACTTTCCGACT 59.896 50.000 0.00 0.00 0.00 4.18
69 70 0.232303 GCACAACGACTTTCCGACTG 59.768 55.000 0.00 0.00 0.00 3.51
70 71 1.567504 CACAACGACTTTCCGACTGT 58.432 50.000 0.00 0.00 32.53 3.55
71 72 1.521423 CACAACGACTTTCCGACTGTC 59.479 52.381 0.00 0.00 30.96 3.51
72 73 1.407979 ACAACGACTTTCCGACTGTCT 59.592 47.619 6.21 0.00 0.00 3.41
73 74 2.620115 ACAACGACTTTCCGACTGTCTA 59.380 45.455 6.21 0.00 0.00 2.59
74 75 2.978489 CAACGACTTTCCGACTGTCTAC 59.022 50.000 6.21 0.00 0.00 2.59
75 76 2.502295 ACGACTTTCCGACTGTCTACT 58.498 47.619 6.21 0.00 0.00 2.57
76 77 3.668447 ACGACTTTCCGACTGTCTACTA 58.332 45.455 6.21 0.00 0.00 1.82
77 78 3.434984 ACGACTTTCCGACTGTCTACTAC 59.565 47.826 6.21 0.00 0.00 2.73
78 79 3.434641 CGACTTTCCGACTGTCTACTACA 59.565 47.826 6.21 0.00 36.42 2.74
79 80 4.083643 CGACTTTCCGACTGTCTACTACAA 60.084 45.833 6.21 0.00 37.74 2.41
80 81 5.118642 ACTTTCCGACTGTCTACTACAAC 57.881 43.478 6.21 0.00 37.74 3.32
81 82 4.581824 ACTTTCCGACTGTCTACTACAACA 59.418 41.667 6.21 0.00 37.74 3.33
82 83 5.068198 ACTTTCCGACTGTCTACTACAACAA 59.932 40.000 6.21 0.00 37.74 2.83
83 84 4.494350 TCCGACTGTCTACTACAACAAC 57.506 45.455 6.21 0.00 37.74 3.32
84 85 3.058708 TCCGACTGTCTACTACAACAACG 60.059 47.826 6.21 0.00 37.74 4.10
85 86 3.304257 CCGACTGTCTACTACAACAACGT 60.304 47.826 6.21 0.00 37.74 3.99
86 87 4.285292 CGACTGTCTACTACAACAACGTT 58.715 43.478 6.21 0.00 37.74 3.99
87 88 4.736793 CGACTGTCTACTACAACAACGTTT 59.263 41.667 0.00 0.00 37.74 3.60
88 89 5.331309 CGACTGTCTACTACAACAACGTTTG 60.331 44.000 0.00 0.00 37.74 2.93
89 90 4.269363 ACTGTCTACTACAACAACGTTTGC 59.731 41.667 0.00 0.00 37.74 3.68
90 91 3.556775 TGTCTACTACAACAACGTTTGCC 59.443 43.478 0.00 0.00 34.29 4.52
91 92 3.059393 GTCTACTACAACAACGTTTGCCC 60.059 47.826 0.00 0.00 0.00 5.36
92 93 0.658897 ACTACAACAACGTTTGCCCG 59.341 50.000 0.00 0.00 0.00 6.13
93 94 0.938713 CTACAACAACGTTTGCCCGA 59.061 50.000 0.00 0.00 0.00 5.14
94 95 0.656785 TACAACAACGTTTGCCCGAC 59.343 50.000 0.00 0.00 0.00 4.79
95 96 1.027792 ACAACAACGTTTGCCCGACT 61.028 50.000 0.00 0.00 0.00 4.18
96 97 0.099791 CAACAACGTTTGCCCGACTT 59.900 50.000 0.00 0.00 0.00 3.01
97 98 0.379316 AACAACGTTTGCCCGACTTC 59.621 50.000 0.00 0.00 0.00 3.01
98 99 0.745128 ACAACGTTTGCCCGACTTCA 60.745 50.000 0.00 0.00 0.00 3.02
99 100 0.041312 CAACGTTTGCCCGACTTCAG 60.041 55.000 0.00 0.00 0.00 3.02
100 101 1.782028 AACGTTTGCCCGACTTCAGC 61.782 55.000 0.00 0.00 0.00 4.26
101 102 2.556287 GTTTGCCCGACTTCAGCG 59.444 61.111 0.00 0.00 0.00 5.18
102 103 1.959226 GTTTGCCCGACTTCAGCGA 60.959 57.895 0.00 0.00 0.00 4.93
103 104 1.003839 TTTGCCCGACTTCAGCGAT 60.004 52.632 0.00 0.00 0.00 4.58
104 105 1.298157 TTTGCCCGACTTCAGCGATG 61.298 55.000 0.00 0.00 0.00 3.84
105 106 2.892425 GCCCGACTTCAGCGATGG 60.892 66.667 0.00 0.00 0.00 3.51
106 107 2.892640 CCCGACTTCAGCGATGGA 59.107 61.111 0.00 0.00 0.00 3.41
107 108 1.227089 CCCGACTTCAGCGATGGAG 60.227 63.158 7.60 7.60 0.00 3.86
108 109 1.227089 CCGACTTCAGCGATGGAGG 60.227 63.158 14.62 0.00 0.00 4.30
109 110 1.227089 CGACTTCAGCGATGGAGGG 60.227 63.158 14.62 0.49 0.00 4.30
110 111 1.144936 GACTTCAGCGATGGAGGGG 59.855 63.158 14.62 0.00 0.00 4.79
111 112 2.203126 CTTCAGCGATGGAGGGGC 60.203 66.667 0.00 0.00 0.00 5.80
112 113 4.161295 TTCAGCGATGGAGGGGCG 62.161 66.667 0.00 0.00 0.00 6.13
114 115 3.933722 CAGCGATGGAGGGGCGAT 61.934 66.667 0.00 0.00 0.00 4.58
115 116 3.933722 AGCGATGGAGGGGCGATG 61.934 66.667 0.00 0.00 0.00 3.84
116 117 3.928779 GCGATGGAGGGGCGATGA 61.929 66.667 0.00 0.00 0.00 2.92
117 118 3.063526 CGATGGAGGGGCGATGAT 58.936 61.111 0.00 0.00 0.00 2.45
118 119 1.888436 GCGATGGAGGGGCGATGATA 61.888 60.000 0.00 0.00 0.00 2.15
119 120 0.174389 CGATGGAGGGGCGATGATAG 59.826 60.000 0.00 0.00 0.00 2.08
120 121 0.107945 GATGGAGGGGCGATGATAGC 60.108 60.000 0.00 0.00 0.00 2.97
121 122 1.892819 ATGGAGGGGCGATGATAGCG 61.893 60.000 0.00 0.00 35.00 4.26
122 123 2.262915 GAGGGGCGATGATAGCGG 59.737 66.667 0.00 0.00 35.00 5.52
143 144 3.191539 GCCTTCGGCTCGCTTCAG 61.192 66.667 0.00 0.00 46.69 3.02
144 145 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
145 146 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
146 147 2.734673 CTTCGGCTCGCTTCAGTGC 61.735 63.158 0.00 0.00 0.00 4.40
147 148 3.226429 TTCGGCTCGCTTCAGTGCT 62.226 57.895 0.00 0.00 0.00 4.40
148 149 2.715532 TTCGGCTCGCTTCAGTGCTT 62.716 55.000 0.00 0.00 0.00 3.91
149 150 2.866028 GGCTCGCTTCAGTGCTTG 59.134 61.111 0.00 0.00 0.00 4.01
150 151 1.963338 GGCTCGCTTCAGTGCTTGT 60.963 57.895 0.00 0.00 0.00 3.16
151 152 0.670546 GGCTCGCTTCAGTGCTTGTA 60.671 55.000 0.00 0.00 0.00 2.41
152 153 1.148310 GCTCGCTTCAGTGCTTGTAA 58.852 50.000 0.00 0.00 0.00 2.41
153 154 1.734465 GCTCGCTTCAGTGCTTGTAAT 59.266 47.619 0.00 0.00 0.00 1.89
154 155 2.222908 GCTCGCTTCAGTGCTTGTAATC 60.223 50.000 0.00 0.00 0.00 1.75
155 156 1.992667 TCGCTTCAGTGCTTGTAATCG 59.007 47.619 0.00 0.00 0.00 3.34
156 157 1.726791 CGCTTCAGTGCTTGTAATCGT 59.273 47.619 0.00 0.00 0.00 3.73
157 158 2.222596 CGCTTCAGTGCTTGTAATCGTC 60.223 50.000 0.00 0.00 0.00 4.20
158 159 2.736721 GCTTCAGTGCTTGTAATCGTCA 59.263 45.455 0.00 0.00 0.00 4.35
159 160 3.423645 GCTTCAGTGCTTGTAATCGTCAC 60.424 47.826 0.00 0.00 0.00 3.67
160 161 3.660501 TCAGTGCTTGTAATCGTCACT 57.339 42.857 0.00 0.00 38.40 3.41
161 162 4.776795 TCAGTGCTTGTAATCGTCACTA 57.223 40.909 0.00 0.00 36.37 2.74
162 163 4.733850 TCAGTGCTTGTAATCGTCACTAG 58.266 43.478 0.00 0.00 36.37 2.57
163 164 3.859961 CAGTGCTTGTAATCGTCACTAGG 59.140 47.826 0.00 0.00 36.37 3.02
164 165 3.510360 AGTGCTTGTAATCGTCACTAGGT 59.490 43.478 0.00 0.00 36.37 3.08
165 166 3.612860 GTGCTTGTAATCGTCACTAGGTG 59.387 47.826 0.00 0.00 34.45 4.00
166 167 3.187700 GCTTGTAATCGTCACTAGGTGG 58.812 50.000 0.00 0.00 33.87 4.61
167 168 3.368116 GCTTGTAATCGTCACTAGGTGGT 60.368 47.826 0.00 0.00 33.87 4.16
168 169 4.421948 CTTGTAATCGTCACTAGGTGGTC 58.578 47.826 0.00 0.00 33.87 4.02
169 170 3.693807 TGTAATCGTCACTAGGTGGTCT 58.306 45.455 0.00 0.00 33.87 3.85
170 171 4.847198 TGTAATCGTCACTAGGTGGTCTA 58.153 43.478 0.00 0.00 33.87 2.59
171 172 4.637534 TGTAATCGTCACTAGGTGGTCTAC 59.362 45.833 0.00 0.00 33.87 2.59
172 173 1.730501 TCGTCACTAGGTGGTCTACG 58.269 55.000 0.00 0.00 33.87 3.51
173 174 0.731417 CGTCACTAGGTGGTCTACGG 59.269 60.000 0.00 0.00 33.87 4.02
174 175 1.676916 CGTCACTAGGTGGTCTACGGA 60.677 57.143 0.00 0.00 33.87 4.69
175 176 2.652590 GTCACTAGGTGGTCTACGGAT 58.347 52.381 0.00 0.00 33.87 4.18
176 177 2.617774 GTCACTAGGTGGTCTACGGATC 59.382 54.545 0.00 0.00 33.87 3.36
177 178 2.508716 TCACTAGGTGGTCTACGGATCT 59.491 50.000 0.00 0.00 33.87 2.75
178 179 3.053842 TCACTAGGTGGTCTACGGATCTT 60.054 47.826 0.00 0.00 33.87 2.40
179 180 3.066900 CACTAGGTGGTCTACGGATCTTG 59.933 52.174 0.00 0.00 0.00 3.02
180 181 2.526888 AGGTGGTCTACGGATCTTGA 57.473 50.000 0.00 0.00 0.00 3.02
181 182 3.033659 AGGTGGTCTACGGATCTTGAT 57.966 47.619 0.00 0.00 0.00 2.57
182 183 2.695666 AGGTGGTCTACGGATCTTGATG 59.304 50.000 0.00 0.00 0.00 3.07
183 184 2.431057 GGTGGTCTACGGATCTTGATGT 59.569 50.000 0.00 0.00 0.00 3.06
184 185 3.635373 GGTGGTCTACGGATCTTGATGTA 59.365 47.826 0.00 0.00 0.00 2.29
185 186 4.098960 GGTGGTCTACGGATCTTGATGTAA 59.901 45.833 0.00 0.00 0.00 2.41
186 187 5.221461 GGTGGTCTACGGATCTTGATGTAAT 60.221 44.000 0.00 0.00 0.00 1.89
187 188 6.281405 GTGGTCTACGGATCTTGATGTAATT 58.719 40.000 0.00 0.00 0.00 1.40
188 189 6.761714 GTGGTCTACGGATCTTGATGTAATTT 59.238 38.462 0.00 0.00 0.00 1.82
189 190 7.280205 GTGGTCTACGGATCTTGATGTAATTTT 59.720 37.037 0.00 0.00 0.00 1.82
190 191 7.827236 TGGTCTACGGATCTTGATGTAATTTTT 59.173 33.333 0.00 0.00 0.00 1.94
191 192 9.321562 GGTCTACGGATCTTGATGTAATTTTTA 57.678 33.333 0.00 0.00 0.00 1.52
217 218 8.970691 TTATTTCTAGTGTTCGTTGTACTACC 57.029 34.615 1.76 0.00 0.00 3.18
218 219 6.389830 TTTCTAGTGTTCGTTGTACTACCA 57.610 37.500 1.76 0.00 0.00 3.25
219 220 6.579666 TTCTAGTGTTCGTTGTACTACCAT 57.420 37.500 1.76 0.00 0.00 3.55
220 221 5.946298 TCTAGTGTTCGTTGTACTACCATG 58.054 41.667 1.76 0.00 0.00 3.66
221 222 4.859304 AGTGTTCGTTGTACTACCATGA 57.141 40.909 0.00 0.00 0.00 3.07
222 223 5.401531 AGTGTTCGTTGTACTACCATGAT 57.598 39.130 0.00 0.00 0.00 2.45
223 224 5.790593 AGTGTTCGTTGTACTACCATGATT 58.209 37.500 0.00 0.00 0.00 2.57
224 225 5.637810 AGTGTTCGTTGTACTACCATGATTG 59.362 40.000 0.00 0.00 0.00 2.67
225 226 5.636121 GTGTTCGTTGTACTACCATGATTGA 59.364 40.000 0.00 0.00 0.00 2.57
226 227 6.146510 GTGTTCGTTGTACTACCATGATTGAA 59.853 38.462 0.00 0.00 0.00 2.69
227 228 6.367695 TGTTCGTTGTACTACCATGATTGAAG 59.632 38.462 0.00 0.00 0.00 3.02
228 229 6.275494 TCGTTGTACTACCATGATTGAAGA 57.725 37.500 0.00 0.00 0.00 2.87
229 230 6.873997 TCGTTGTACTACCATGATTGAAGAT 58.126 36.000 0.00 0.00 0.00 2.40
230 231 6.756542 TCGTTGTACTACCATGATTGAAGATG 59.243 38.462 0.00 0.00 0.00 2.90
231 232 6.756542 CGTTGTACTACCATGATTGAAGATGA 59.243 38.462 0.00 0.00 0.00 2.92
232 233 7.277760 CGTTGTACTACCATGATTGAAGATGAA 59.722 37.037 0.00 0.00 0.00 2.57
233 234 9.113838 GTTGTACTACCATGATTGAAGATGAAT 57.886 33.333 0.00 0.00 0.00 2.57
235 236 9.987272 TGTACTACCATGATTGAAGATGAATAG 57.013 33.333 0.00 0.00 0.00 1.73
236 237 9.429359 GTACTACCATGATTGAAGATGAATAGG 57.571 37.037 0.00 0.00 0.00 2.57
237 238 8.038862 ACTACCATGATTGAAGATGAATAGGT 57.961 34.615 0.00 0.00 0.00 3.08
238 239 8.497745 ACTACCATGATTGAAGATGAATAGGTT 58.502 33.333 0.00 0.00 0.00 3.50
239 240 7.578310 ACCATGATTGAAGATGAATAGGTTG 57.422 36.000 0.00 0.00 0.00 3.77
240 241 7.348815 ACCATGATTGAAGATGAATAGGTTGA 58.651 34.615 0.00 0.00 0.00 3.18
241 242 7.835682 ACCATGATTGAAGATGAATAGGTTGAA 59.164 33.333 0.00 0.00 0.00 2.69
242 243 8.689061 CCATGATTGAAGATGAATAGGTTGAAA 58.311 33.333 0.00 0.00 0.00 2.69
243 244 9.731819 CATGATTGAAGATGAATAGGTTGAAAG 57.268 33.333 0.00 0.00 0.00 2.62
244 245 8.868522 TGATTGAAGATGAATAGGTTGAAAGT 57.131 30.769 0.00 0.00 0.00 2.66
245 246 9.300681 TGATTGAAGATGAATAGGTTGAAAGTT 57.699 29.630 0.00 0.00 0.00 2.66
249 250 9.965824 TGAAGATGAATAGGTTGAAAGTTTTTC 57.034 29.630 0.00 0.00 0.00 2.29
250 251 9.411801 GAAGATGAATAGGTTGAAAGTTTTTCC 57.588 33.333 0.00 0.00 0.00 3.13
251 252 8.712228 AGATGAATAGGTTGAAAGTTTTTCCT 57.288 30.769 10.47 10.47 0.00 3.36
252 253 8.579863 AGATGAATAGGTTGAAAGTTTTTCCTG 58.420 33.333 13.67 0.00 0.00 3.86
253 254 6.512297 TGAATAGGTTGAAAGTTTTTCCTGC 58.488 36.000 13.67 6.99 0.00 4.85
254 255 6.097554 TGAATAGGTTGAAAGTTTTTCCTGCA 59.902 34.615 13.67 0.00 0.00 4.41
255 256 4.817318 AGGTTGAAAGTTTTTCCTGCAA 57.183 36.364 6.44 0.00 0.00 4.08
256 257 5.357742 AGGTTGAAAGTTTTTCCTGCAAT 57.642 34.783 6.44 0.00 0.00 3.56
257 258 5.744171 AGGTTGAAAGTTTTTCCTGCAATT 58.256 33.333 6.44 0.00 0.00 2.32
258 259 6.179756 AGGTTGAAAGTTTTTCCTGCAATTT 58.820 32.000 6.44 0.00 0.00 1.82
259 260 6.658816 AGGTTGAAAGTTTTTCCTGCAATTTT 59.341 30.769 6.44 0.00 0.00 1.82
260 261 7.176515 AGGTTGAAAGTTTTTCCTGCAATTTTT 59.823 29.630 6.44 0.00 0.00 1.94
282 283 6.959639 TTTTTACTCTTGCCATGAAGTCTT 57.040 33.333 0.00 0.00 0.00 3.01
283 284 5.947228 TTTACTCTTGCCATGAAGTCTTG 57.053 39.130 0.00 0.00 0.00 3.02
284 285 2.787994 ACTCTTGCCATGAAGTCTTGG 58.212 47.619 8.52 8.52 42.28 3.61
285 286 2.373169 ACTCTTGCCATGAAGTCTTGGA 59.627 45.455 15.50 0.85 42.04 3.53
286 287 3.181440 ACTCTTGCCATGAAGTCTTGGAA 60.181 43.478 15.50 3.85 42.04 3.53
287 288 3.822735 CTCTTGCCATGAAGTCTTGGAAA 59.177 43.478 15.50 10.92 42.04 3.13
288 289 4.214310 TCTTGCCATGAAGTCTTGGAAAA 58.786 39.130 15.50 8.71 42.04 2.29
289 290 4.037923 TCTTGCCATGAAGTCTTGGAAAAC 59.962 41.667 15.50 0.91 42.04 2.43
290 291 3.295093 TGCCATGAAGTCTTGGAAAACA 58.705 40.909 15.50 3.17 42.04 2.83
291 292 3.896888 TGCCATGAAGTCTTGGAAAACAT 59.103 39.130 15.50 0.00 42.04 2.71
292 293 4.240096 GCCATGAAGTCTTGGAAAACATG 58.760 43.478 15.50 0.00 42.04 3.21
293 294 4.240096 CCATGAAGTCTTGGAAAACATGC 58.760 43.478 7.32 0.00 42.04 4.06
294 295 4.240096 CATGAAGTCTTGGAAAACATGCC 58.760 43.478 0.00 0.00 0.00 4.40
295 296 3.295093 TGAAGTCTTGGAAAACATGCCA 58.705 40.909 0.00 0.00 0.00 4.92
296 297 3.068024 TGAAGTCTTGGAAAACATGCCAC 59.932 43.478 0.00 0.00 33.01 5.01
297 298 1.608590 AGTCTTGGAAAACATGCCACG 59.391 47.619 0.00 0.00 33.01 4.94
298 299 0.313672 TCTTGGAAAACATGCCACGC 59.686 50.000 0.00 0.00 33.01 5.34
299 300 0.031857 CTTGGAAAACATGCCACGCA 59.968 50.000 0.00 0.00 44.86 5.24
300 301 0.461548 TTGGAAAACATGCCACGCAA 59.538 45.000 0.00 0.00 43.62 4.85
301 302 0.461548 TGGAAAACATGCCACGCAAA 59.538 45.000 0.00 0.00 43.62 3.68
302 303 1.069823 TGGAAAACATGCCACGCAAAT 59.930 42.857 0.00 0.00 43.62 2.32
303 304 1.726248 GGAAAACATGCCACGCAAATC 59.274 47.619 0.00 0.00 43.62 2.17
304 305 2.610232 GGAAAACATGCCACGCAAATCT 60.610 45.455 0.00 0.00 43.62 2.40
305 306 2.818130 AAACATGCCACGCAAATCTT 57.182 40.000 0.00 0.00 43.62 2.40
306 307 2.818130 AACATGCCACGCAAATCTTT 57.182 40.000 0.00 0.00 43.62 2.52
307 308 2.818130 ACATGCCACGCAAATCTTTT 57.182 40.000 0.00 0.00 43.62 2.27
308 309 2.406130 ACATGCCACGCAAATCTTTTG 58.594 42.857 0.00 0.00 43.62 2.44
309 310 2.224018 ACATGCCACGCAAATCTTTTGT 60.224 40.909 0.00 0.00 43.62 2.83
310 311 2.593346 TGCCACGCAAATCTTTTGTT 57.407 40.000 2.32 0.00 34.76 2.83
320 321 9.128107 CACGCAAATCTTTTGTTAGATGTTAAT 57.872 29.630 2.32 0.00 35.12 1.40
359 360 7.624549 TCTGTATGGATTCTAAATATGAGCCC 58.375 38.462 0.00 0.00 0.00 5.19
379 380 5.186992 AGCCCCTTTAATACATGTGTTTTCC 59.813 40.000 13.37 0.00 0.00 3.13
380 381 5.046950 GCCCCTTTAATACATGTGTTTTCCA 60.047 40.000 13.37 0.00 0.00 3.53
390 391 4.940046 ACATGTGTTTTCCAAATTTGTGCA 59.060 33.333 16.73 5.58 0.00 4.57
400 401 4.082081 TCCAAATTTGTGCATGTCATCCTC 60.082 41.667 16.73 0.00 0.00 3.71
404 405 1.811266 GTGCATGTCATCCTCGCGT 60.811 57.895 5.77 0.00 0.00 6.01
405 406 0.527600 GTGCATGTCATCCTCGCGTA 60.528 55.000 5.77 0.00 0.00 4.42
406 407 0.389025 TGCATGTCATCCTCGCGTAT 59.611 50.000 5.77 0.00 0.00 3.06
407 408 1.611491 TGCATGTCATCCTCGCGTATA 59.389 47.619 5.77 0.00 0.00 1.47
438 444 6.509418 TCAAAATATGCGCCCCTTTATATC 57.491 37.500 4.18 0.00 0.00 1.63
441 447 7.831690 TCAAAATATGCGCCCCTTTATATCATA 59.168 33.333 4.18 0.00 0.00 2.15
447 453 4.708177 CGCCCCTTTATATCATAGGATGG 58.292 47.826 0.00 0.00 34.89 3.51
448 454 4.444876 CGCCCCTTTATATCATAGGATGGG 60.445 50.000 0.00 2.05 34.12 4.00
449 455 4.726825 GCCCCTTTATATCATAGGATGGGA 59.273 45.833 11.31 0.00 34.95 4.37
450 456 5.373854 GCCCCTTTATATCATAGGATGGGAT 59.626 44.000 11.31 0.00 34.95 3.85
451 457 6.692526 GCCCCTTTATATCATAGGATGGGATG 60.693 46.154 11.31 0.00 34.95 3.51
452 458 6.391055 CCCCTTTATATCATAGGATGGGATGT 59.609 42.308 10.47 0.00 34.95 3.06
453 459 7.091811 CCCCTTTATATCATAGGATGGGATGTT 60.092 40.741 10.47 0.00 34.95 2.71
454 460 8.339247 CCCTTTATATCATAGGATGGGATGTTT 58.661 37.037 4.14 0.00 34.95 2.83
516 535 7.257003 TCCACCAATGTAAATTCATTTCGATG 58.743 34.615 0.00 0.00 36.10 3.84
613 632 2.028561 ATGCCCCCACAAACTTCATT 57.971 45.000 0.00 0.00 0.00 2.57
614 633 1.799933 TGCCCCCACAAACTTCATTT 58.200 45.000 0.00 0.00 0.00 2.32
615 634 2.122768 TGCCCCCACAAACTTCATTTT 58.877 42.857 0.00 0.00 0.00 1.82
616 635 2.507471 TGCCCCCACAAACTTCATTTTT 59.493 40.909 0.00 0.00 0.00 1.94
617 636 3.711704 TGCCCCCACAAACTTCATTTTTA 59.288 39.130 0.00 0.00 0.00 1.52
618 637 4.349342 TGCCCCCACAAACTTCATTTTTAT 59.651 37.500 0.00 0.00 0.00 1.40
619 638 5.163152 TGCCCCCACAAACTTCATTTTTATT 60.163 36.000 0.00 0.00 0.00 1.40
620 639 5.767665 GCCCCCACAAACTTCATTTTTATTT 59.232 36.000 0.00 0.00 0.00 1.40
621 640 6.264292 GCCCCCACAAACTTCATTTTTATTTT 59.736 34.615 0.00 0.00 0.00 1.82
651 670 7.687005 TTTAGCGGTACAAACTTCATTTTTG 57.313 32.000 0.00 0.00 39.44 2.44
658 677 9.894439 CGGTACAAACTTCATTTTTGTTTTTAG 57.106 29.630 5.83 0.00 43.16 1.85
694 749 9.681839 TGAAAAATATATTATCCCCAAACCCAT 57.318 29.630 0.00 0.00 0.00 4.00
702 757 1.075374 TCCCCAAACCCATCACTTGAG 59.925 52.381 0.00 0.00 0.00 3.02
708 763 5.126061 CCCAAACCCATCACTTGAGAAATAG 59.874 44.000 0.00 0.00 0.00 1.73
712 767 6.566079 ACCCATCACTTGAGAAATAGATGA 57.434 37.500 0.00 0.00 35.98 2.92
713 768 6.352516 ACCCATCACTTGAGAAATAGATGAC 58.647 40.000 0.00 0.00 35.98 3.06
715 770 5.762218 CCATCACTTGAGAAATAGATGACCC 59.238 44.000 0.00 0.00 35.98 4.46
717 772 6.373005 TCACTTGAGAAATAGATGACCCAA 57.627 37.500 0.00 0.00 0.00 4.12
718 773 6.173339 TCACTTGAGAAATAGATGACCCAAC 58.827 40.000 0.00 0.00 0.00 3.77
719 774 5.939883 CACTTGAGAAATAGATGACCCAACA 59.060 40.000 0.00 0.00 0.00 3.33
720 775 6.600822 CACTTGAGAAATAGATGACCCAACAT 59.399 38.462 0.00 0.00 0.00 2.71
724 779 9.527157 TTGAGAAATAGATGACCCAACATTTTA 57.473 29.630 0.00 0.00 0.00 1.52
725 780 8.956426 TGAGAAATAGATGACCCAACATTTTAC 58.044 33.333 0.00 0.00 0.00 2.01
733 788 8.576442 AGATGACCCAACATTTTACTAACTTTG 58.424 33.333 0.00 0.00 0.00 2.77
734 789 7.648039 TGACCCAACATTTTACTAACTTTGT 57.352 32.000 0.00 0.00 0.00 2.83
735 790 8.749026 TGACCCAACATTTTACTAACTTTGTA 57.251 30.769 0.00 0.00 0.00 2.41
736 791 9.357161 TGACCCAACATTTTACTAACTTTGTAT 57.643 29.630 0.00 0.00 0.00 2.29
764 819 7.981102 AAATAGTACAAAGTTGAGTTCCCTC 57.019 36.000 0.00 0.00 38.27 4.30
765 820 4.353383 AGTACAAAGTTGAGTTCCCTCC 57.647 45.455 0.00 0.00 36.86 4.30
766 821 2.256117 ACAAAGTTGAGTTCCCTCCG 57.744 50.000 0.00 0.00 36.86 4.63
767 822 1.489230 ACAAAGTTGAGTTCCCTCCGT 59.511 47.619 0.00 0.00 36.86 4.69
768 823 2.143925 CAAAGTTGAGTTCCCTCCGTC 58.856 52.381 0.00 0.00 36.86 4.79
769 824 1.718280 AAGTTGAGTTCCCTCCGTCT 58.282 50.000 0.00 0.00 36.86 4.18
770 825 0.969894 AGTTGAGTTCCCTCCGTCTG 59.030 55.000 0.00 0.00 36.86 3.51
771 826 0.966920 GTTGAGTTCCCTCCGTCTGA 59.033 55.000 0.00 0.00 36.86 3.27
772 827 1.067495 GTTGAGTTCCCTCCGTCTGAG 60.067 57.143 0.00 0.00 41.07 3.35
773 828 0.404426 TGAGTTCCCTCCGTCTGAGA 59.596 55.000 0.00 0.00 44.42 3.27
774 829 1.203013 TGAGTTCCCTCCGTCTGAGAA 60.203 52.381 0.00 0.00 44.42 2.87
775 830 1.893801 GAGTTCCCTCCGTCTGAGAAA 59.106 52.381 0.00 0.00 44.42 2.52
776 831 2.299297 GAGTTCCCTCCGTCTGAGAAAA 59.701 50.000 0.00 0.00 44.42 2.29
777 832 2.907042 AGTTCCCTCCGTCTGAGAAAAT 59.093 45.455 0.00 0.00 44.42 1.82
778 833 3.328050 AGTTCCCTCCGTCTGAGAAAATT 59.672 43.478 0.00 0.00 44.42 1.82
779 834 4.072839 GTTCCCTCCGTCTGAGAAAATTT 58.927 43.478 0.00 0.00 44.42 1.82
780 835 3.674997 TCCCTCCGTCTGAGAAAATTTG 58.325 45.455 0.00 0.00 44.42 2.32
781 836 3.072476 TCCCTCCGTCTGAGAAAATTTGT 59.928 43.478 0.00 0.00 44.42 2.83
782 837 3.437049 CCCTCCGTCTGAGAAAATTTGTC 59.563 47.826 0.00 0.00 44.42 3.18
783 838 3.437049 CCTCCGTCTGAGAAAATTTGTCC 59.563 47.826 0.30 0.00 44.42 4.02
784 839 4.319177 CTCCGTCTGAGAAAATTTGTCCT 58.681 43.478 0.30 0.00 44.42 3.85
785 840 4.714632 TCCGTCTGAGAAAATTTGTCCTT 58.285 39.130 0.30 0.00 0.00 3.36
786 841 4.515191 TCCGTCTGAGAAAATTTGTCCTTG 59.485 41.667 0.30 0.00 0.00 3.61
787 842 4.515191 CCGTCTGAGAAAATTTGTCCTTGA 59.485 41.667 0.30 0.00 0.00 3.02
788 843 5.008613 CCGTCTGAGAAAATTTGTCCTTGAA 59.991 40.000 0.30 0.00 0.00 2.69
789 844 6.459573 CCGTCTGAGAAAATTTGTCCTTGAAA 60.460 38.462 0.30 0.00 0.00 2.69
790 845 7.141363 CGTCTGAGAAAATTTGTCCTTGAAAT 58.859 34.615 0.30 0.00 0.00 2.17
791 846 7.113965 CGTCTGAGAAAATTTGTCCTTGAAATG 59.886 37.037 0.30 0.00 0.00 2.32
792 847 7.383300 GTCTGAGAAAATTTGTCCTTGAAATGG 59.617 37.037 0.30 0.00 0.00 3.16
793 848 7.287466 TCTGAGAAAATTTGTCCTTGAAATGGA 59.713 33.333 0.30 0.00 37.91 3.41
794 849 7.965718 TGAGAAAATTTGTCCTTGAAATGGAT 58.034 30.769 0.30 0.00 42.67 3.41
795 850 7.874016 TGAGAAAATTTGTCCTTGAAATGGATG 59.126 33.333 0.30 0.00 42.67 3.51
796 851 7.738847 AGAAAATTTGTCCTTGAAATGGATGT 58.261 30.769 0.00 0.00 42.67 3.06
797 852 8.869109 AGAAAATTTGTCCTTGAAATGGATGTA 58.131 29.630 0.00 0.00 42.67 2.29
798 853 9.657419 GAAAATTTGTCCTTGAAATGGATGTAT 57.343 29.630 0.00 0.00 42.67 2.29
799 854 9.657419 AAAATTTGTCCTTGAAATGGATGTATC 57.343 29.630 0.00 0.00 42.67 2.24
800 855 8.599624 AATTTGTCCTTGAAATGGATGTATCT 57.400 30.769 0.00 0.00 42.67 1.98
801 856 9.699410 AATTTGTCCTTGAAATGGATGTATCTA 57.301 29.630 0.00 0.00 42.67 1.98
802 857 8.737168 TTTGTCCTTGAAATGGATGTATCTAG 57.263 34.615 0.00 0.00 42.67 2.43
803 858 7.437713 TGTCCTTGAAATGGATGTATCTAGT 57.562 36.000 0.00 0.00 42.67 2.57
804 859 8.547481 TGTCCTTGAAATGGATGTATCTAGTA 57.453 34.615 0.00 0.00 42.67 1.82
805 860 9.159254 TGTCCTTGAAATGGATGTATCTAGTAT 57.841 33.333 0.00 0.00 42.67 2.12
806 861 9.646427 GTCCTTGAAATGGATGTATCTAGTATC 57.354 37.037 0.00 0.00 42.67 2.24
807 862 9.379770 TCCTTGAAATGGATGTATCTAGTATCA 57.620 33.333 0.00 0.00 34.87 2.15
816 871 8.577296 TGGATGTATCTAGTATCAAGTTAGTGC 58.423 37.037 0.00 0.00 0.00 4.40
817 872 8.798402 GGATGTATCTAGTATCAAGTTAGTGCT 58.202 37.037 0.00 0.00 0.00 4.40
827 882 8.085296 AGTATCAAGTTAGTGCTAGATACATGC 58.915 37.037 11.52 0.00 39.94 4.06
828 883 6.220726 TCAAGTTAGTGCTAGATACATGCA 57.779 37.500 0.00 0.00 0.00 3.96
829 884 6.820335 TCAAGTTAGTGCTAGATACATGCAT 58.180 36.000 0.00 0.00 39.00 3.96
830 885 6.925718 TCAAGTTAGTGCTAGATACATGCATC 59.074 38.462 0.00 0.00 39.00 3.91
831 886 6.662865 AGTTAGTGCTAGATACATGCATCT 57.337 37.500 13.02 13.02 39.00 2.90
832 887 6.453943 AGTTAGTGCTAGATACATGCATCTG 58.546 40.000 17.29 9.15 39.00 2.90
833 888 6.266330 AGTTAGTGCTAGATACATGCATCTGA 59.734 38.462 17.29 0.30 39.00 3.27
834 889 5.541953 AGTGCTAGATACATGCATCTGAA 57.458 39.130 17.29 0.00 39.00 3.02
835 890 5.922053 AGTGCTAGATACATGCATCTGAAA 58.078 37.500 17.29 0.00 39.00 2.69
836 891 6.351711 AGTGCTAGATACATGCATCTGAAAA 58.648 36.000 17.29 0.00 39.00 2.29
837 892 6.825213 AGTGCTAGATACATGCATCTGAAAAA 59.175 34.615 17.29 0.00 39.00 1.94
838 893 7.501559 AGTGCTAGATACATGCATCTGAAAAAT 59.498 33.333 17.29 0.00 39.00 1.82
839 894 8.777413 GTGCTAGATACATGCATCTGAAAAATA 58.223 33.333 17.29 0.00 39.00 1.40
840 895 9.341078 TGCTAGATACATGCATCTGAAAAATAA 57.659 29.630 17.29 0.00 35.99 1.40
841 896 9.823098 GCTAGATACATGCATCTGAAAAATAAG 57.177 33.333 17.29 6.28 35.99 1.73
846 901 7.894376 ACATGCATCTGAAAAATAAGTTTGG 57.106 32.000 0.00 0.00 0.00 3.28
847 902 6.875195 ACATGCATCTGAAAAATAAGTTTGGG 59.125 34.615 0.00 0.00 0.00 4.12
848 903 6.662865 TGCATCTGAAAAATAAGTTTGGGA 57.337 33.333 0.00 0.00 0.00 4.37
849 904 6.454795 TGCATCTGAAAAATAAGTTTGGGAC 58.545 36.000 0.00 0.00 0.00 4.46
850 905 6.041409 TGCATCTGAAAAATAAGTTTGGGACA 59.959 34.615 0.00 0.00 0.00 4.02
880 935 2.617276 CGGACGGAGGGAGTATATGCTA 60.617 54.545 0.00 0.00 0.00 3.49
889 944 6.352308 GGAGGGAGTATATGCTAAATTCCTCC 60.352 46.154 19.45 19.45 46.40 4.30
942 997 3.348119 GAGGTTTTTGGCCCAAAACAAA 58.652 40.909 33.79 12.55 42.02 2.83
2053 4885 2.169769 TCCGGTTGATCCCAATACTCAC 59.830 50.000 0.00 0.00 34.39 3.51
2066 4898 6.034591 CCCAATACTCACTTACTGTCTTACG 58.965 44.000 0.00 0.00 0.00 3.18
2160 4995 2.462503 GCACCATGCAAATTGCTGG 58.537 52.632 24.52 24.52 45.31 4.85
2335 5223 9.665719 AACCTTTGTTGATGAACTGTTAATTTT 57.334 25.926 0.00 0.00 32.13 1.82
2336 5224 9.665719 ACCTTTGTTGATGAACTGTTAATTTTT 57.334 25.926 0.00 0.00 32.79 1.94
2371 5259 6.209192 TGACCTTGACAAATGCATTCAGTTAT 59.791 34.615 13.38 0.00 0.00 1.89
2393 5281 8.798153 GTTATTAGTCATTGTATTGTTGCTTGC 58.202 33.333 0.00 0.00 0.00 4.01
2401 5289 0.385029 ATTGTTGCTTGCGCTTGACA 59.615 45.000 9.73 3.72 36.97 3.58
2550 5447 0.682209 CAAGAGGCACATGGGGAAGG 60.682 60.000 0.00 0.00 0.00 3.46
2645 5557 0.043183 TGCCCTGGAGGAAGATGAGA 59.957 55.000 0.00 0.00 38.24 3.27
2873 5833 1.670295 TGATGAATTTCATGGGACGCG 59.330 47.619 16.41 3.53 37.20 6.01
3103 8074 2.179764 GCCGTTGCATGAGGCTTTA 58.820 52.632 17.14 0.00 46.83 1.85
3167 8138 9.784531 ATCGGATAATGTGAAATATCAGAAACT 57.215 29.630 0.00 0.00 36.68 2.66
3202 8173 7.674471 AGGTAAGACAAAGAACAAGCTAATC 57.326 36.000 0.00 0.00 0.00 1.75
3274 8245 6.115448 AGTATGTTGTCTGGGCCTTATATC 57.885 41.667 4.53 0.00 0.00 1.63
3333 8304 3.117888 CCCAGTATCTACATTGGCCTGTT 60.118 47.826 3.32 0.00 0.00 3.16
3361 8332 4.518970 TGTTGTTGGATAAGAAAGTCCTGC 59.481 41.667 0.00 0.00 35.49 4.85
3427 8398 3.550275 TGCTCGTCAATTCGCATTAGTAC 59.450 43.478 0.00 0.00 0.00 2.73
3429 8400 3.110358 TCGTCAATTCGCATTAGTACCG 58.890 45.455 0.00 0.00 0.00 4.02
3465 8436 3.003275 AGTTGGTACGAGTGTTGCATTTG 59.997 43.478 0.00 0.00 0.00 2.32
3479 8450 7.020010 GTGTTGCATTTGTTTTTCATTTGTCA 58.980 30.769 0.00 0.00 0.00 3.58
3520 8492 8.990163 TTACTGATTAAAGTTCTTTTCCTGGT 57.010 30.769 3.12 2.11 0.00 4.00
3531 8503 7.164803 AGTTCTTTTCCTGGTATCAAGAGAAG 58.835 38.462 0.00 0.00 30.91 2.85
3547 8519 9.725019 ATCAAGAGAAGAACATAAACATGTACA 57.275 29.630 0.00 0.00 33.81 2.90
3550 8522 9.561069 AAGAGAAGAACATAAACATGTACAGTT 57.439 29.630 0.00 2.05 33.81 3.16
3565 8537 9.162764 ACATGTACAGTTATATGGAGTTTCAAC 57.837 33.333 0.00 0.00 32.44 3.18
3572 8544 6.543831 AGTTATATGGAGTTTCAACAGGCATC 59.456 38.462 0.00 0.00 0.00 3.91
3585 8557 2.731572 CAGGCATCAATCCTGGAAACT 58.268 47.619 0.00 0.00 45.62 2.66
3586 8558 2.426024 CAGGCATCAATCCTGGAAACTG 59.574 50.000 0.00 0.00 45.62 3.16
3624 8596 5.630415 AGCTGAGGCCAAATTATGTACTA 57.370 39.130 5.01 0.00 39.73 1.82
3646 10569 5.379706 ACCTAGAATCAGAGGAAAATGGG 57.620 43.478 8.04 0.00 36.61 4.00
3665 10588 4.858850 TGGGTCAATGCAAGAGTTATCAT 58.141 39.130 0.00 0.00 0.00 2.45
3668 10591 5.471456 GGGTCAATGCAAGAGTTATCATAGG 59.529 44.000 0.00 0.00 0.00 2.57
3675 10598 5.663106 TGCAAGAGTTATCATAGGAAGAGGT 59.337 40.000 0.00 0.00 0.00 3.85
3696 10619 1.445095 CGGAGGAAGATGAGCTGGG 59.555 63.158 0.00 0.00 0.00 4.45
3717 10640 3.063485 GTGAAGACTTGTCAGAAGGAGC 58.937 50.000 3.49 0.00 0.00 4.70
3720 10643 2.603021 AGACTTGTCAGAAGGAGCAGA 58.397 47.619 3.49 0.00 0.00 4.26
3739 10662 4.440250 GCAGAACTGGAGAAAGATACGCTA 60.440 45.833 3.99 0.00 0.00 4.26
3792 10715 2.869233 GCTAGAGGAAGAGCTGACAG 57.131 55.000 0.00 0.00 35.73 3.51
3793 10716 2.374184 GCTAGAGGAAGAGCTGACAGA 58.626 52.381 6.65 0.00 35.73 3.41
3794 10717 2.358898 GCTAGAGGAAGAGCTGACAGAG 59.641 54.545 6.65 0.00 35.73 3.35
3795 10718 1.851304 AGAGGAAGAGCTGACAGAGG 58.149 55.000 6.65 0.00 0.00 3.69
3796 10719 0.823460 GAGGAAGAGCTGACAGAGGG 59.177 60.000 6.65 0.00 0.00 4.30
3797 10720 0.411452 AGGAAGAGCTGACAGAGGGA 59.589 55.000 6.65 0.00 0.00 4.20
3798 10721 0.823460 GGAAGAGCTGACAGAGGGAG 59.177 60.000 6.65 0.00 0.00 4.30
3799 10722 1.618345 GGAAGAGCTGACAGAGGGAGA 60.618 57.143 6.65 0.00 0.00 3.71
3800 10723 2.387757 GAAGAGCTGACAGAGGGAGAT 58.612 52.381 6.65 0.00 0.00 2.75
3801 10724 1.779221 AGAGCTGACAGAGGGAGATG 58.221 55.000 6.65 0.00 0.00 2.90
3802 10725 1.287442 AGAGCTGACAGAGGGAGATGA 59.713 52.381 6.65 0.00 0.00 2.92
3803 10726 2.106566 GAGCTGACAGAGGGAGATGAA 58.893 52.381 6.65 0.00 0.00 2.57
3804 10727 1.830477 AGCTGACAGAGGGAGATGAAC 59.170 52.381 6.65 0.00 0.00 3.18
3805 10728 1.830477 GCTGACAGAGGGAGATGAACT 59.170 52.381 6.65 0.00 0.00 3.01
3898 10821 2.821969 CAGAAACAGGGGTCAATGGAAG 59.178 50.000 0.00 0.00 0.00 3.46
3905 10828 3.117738 CAGGGGTCAATGGAAGAGCTATT 60.118 47.826 0.00 0.00 34.14 1.73
3910 10833 6.299141 GGGTCAATGGAAGAGCTATTTGATA 58.701 40.000 0.00 0.00 34.14 2.15
3943 10866 3.394606 AGAGGGAGAGACACTAGAGGATC 59.605 52.174 0.00 0.00 29.26 3.36
3944 10867 3.127250 AGGGAGAGACACTAGAGGATCA 58.873 50.000 0.00 0.00 37.82 2.92
3961 10884 2.839486 TCACGATGGCTTTGAGAACT 57.161 45.000 0.00 0.00 0.00 3.01
3997 10920 0.746063 GATGAATTTCATGGGGCGCA 59.254 50.000 16.41 6.74 37.20 6.09
4033 10957 4.228912 CTGTAAGCCTTGTGGTGAAAAG 57.771 45.455 0.00 0.00 35.27 2.27
4057 10981 5.395642 GTCTACTAGTCTCAAGCAACTGAC 58.604 45.833 0.00 0.00 0.00 3.51
4069 10993 6.759272 TCAAGCAACTGACACTATTTACTCT 58.241 36.000 0.00 0.00 0.00 3.24
4103 11027 3.245803 ACCTAGAAGAGCTCCAGAAGGAA 60.246 47.826 22.73 0.00 45.19 3.36
4108 11032 4.161377 AGAAGAGCTCCAGAAGGAACATAC 59.839 45.833 10.93 0.00 45.19 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.454600 AGCAATTGCCGCAGATGAAG 59.545 50.000 26.45 0.00 43.38 3.02
2 3 0.961857 ACAGCAATTGCCGCAGATGA 60.962 50.000 26.45 0.00 43.38 2.92
3 4 0.108992 AACAGCAATTGCCGCAGATG 60.109 50.000 26.45 18.54 43.38 2.90
4 5 0.604578 AAACAGCAATTGCCGCAGAT 59.395 45.000 26.45 4.14 43.38 2.90
5 6 0.388659 AAAACAGCAATTGCCGCAGA 59.611 45.000 26.45 0.00 43.38 4.26
6 7 0.509499 CAAAACAGCAATTGCCGCAG 59.491 50.000 26.45 16.04 43.38 5.18
7 8 0.879400 CCAAAACAGCAATTGCCGCA 60.879 50.000 26.45 0.00 43.38 5.69
8 9 0.879839 ACCAAAACAGCAATTGCCGC 60.880 50.000 26.45 2.03 43.38 6.53
9 10 0.860533 CACCAAAACAGCAATTGCCG 59.139 50.000 26.45 19.37 43.38 5.69
10 11 0.587768 GCACCAAAACAGCAATTGCC 59.412 50.000 26.45 9.18 43.38 4.52
11 12 0.232816 CGCACCAAAACAGCAATTGC 59.767 50.000 23.05 23.05 42.49 3.56
12 13 1.569708 ACGCACCAAAACAGCAATTG 58.430 45.000 0.00 0.00 0.00 2.32
13 14 1.932511 CAACGCACCAAAACAGCAATT 59.067 42.857 0.00 0.00 0.00 2.32
14 15 1.569708 CAACGCACCAAAACAGCAAT 58.430 45.000 0.00 0.00 0.00 3.56
15 16 0.459237 CCAACGCACCAAAACAGCAA 60.459 50.000 0.00 0.00 0.00 3.91
16 17 1.140589 CCAACGCACCAAAACAGCA 59.859 52.632 0.00 0.00 0.00 4.41
17 18 0.459411 AACCAACGCACCAAAACAGC 60.459 50.000 0.00 0.00 0.00 4.40
18 19 1.134175 AGAACCAACGCACCAAAACAG 59.866 47.619 0.00 0.00 0.00 3.16
19 20 1.178276 AGAACCAACGCACCAAAACA 58.822 45.000 0.00 0.00 0.00 2.83
20 21 3.305110 CATAGAACCAACGCACCAAAAC 58.695 45.455 0.00 0.00 0.00 2.43
21 22 2.294791 CCATAGAACCAACGCACCAAAA 59.705 45.455 0.00 0.00 0.00 2.44
22 23 1.883275 CCATAGAACCAACGCACCAAA 59.117 47.619 0.00 0.00 0.00 3.28
23 24 1.529226 CCATAGAACCAACGCACCAA 58.471 50.000 0.00 0.00 0.00 3.67
24 25 0.322098 CCCATAGAACCAACGCACCA 60.322 55.000 0.00 0.00 0.00 4.17
25 26 1.029947 CCCCATAGAACCAACGCACC 61.030 60.000 0.00 0.00 0.00 5.01
26 27 1.654023 GCCCCATAGAACCAACGCAC 61.654 60.000 0.00 0.00 0.00 5.34
27 28 1.377987 GCCCCATAGAACCAACGCA 60.378 57.895 0.00 0.00 0.00 5.24
28 29 2.119029 GGCCCCATAGAACCAACGC 61.119 63.158 0.00 0.00 0.00 4.84
29 30 0.034477 AAGGCCCCATAGAACCAACG 60.034 55.000 0.00 0.00 0.00 4.10
30 31 2.932261 CTAAGGCCCCATAGAACCAAC 58.068 52.381 0.00 0.00 0.00 3.77
31 32 1.214424 GCTAAGGCCCCATAGAACCAA 59.786 52.381 0.00 0.00 0.00 3.67
32 33 0.843984 GCTAAGGCCCCATAGAACCA 59.156 55.000 0.00 0.00 0.00 3.67
33 34 0.843984 TGCTAAGGCCCCATAGAACC 59.156 55.000 0.00 0.00 37.74 3.62
34 35 1.211949 TGTGCTAAGGCCCCATAGAAC 59.788 52.381 0.00 5.53 37.74 3.01
35 36 1.590591 TGTGCTAAGGCCCCATAGAA 58.409 50.000 0.00 0.00 37.74 2.10
36 37 1.211949 GTTGTGCTAAGGCCCCATAGA 59.788 52.381 0.00 0.00 37.74 1.98
37 38 1.680338 GTTGTGCTAAGGCCCCATAG 58.320 55.000 0.00 0.67 37.74 2.23
38 39 0.107410 CGTTGTGCTAAGGCCCCATA 60.107 55.000 0.00 0.00 37.74 2.74
39 40 1.378514 CGTTGTGCTAAGGCCCCAT 60.379 57.895 0.00 0.00 37.74 4.00
40 41 2.033448 CGTTGTGCTAAGGCCCCA 59.967 61.111 0.00 0.00 37.74 4.96
41 42 2.038837 GTCGTTGTGCTAAGGCCCC 61.039 63.158 0.00 0.00 37.74 5.80
42 43 0.605589 AAGTCGTTGTGCTAAGGCCC 60.606 55.000 0.00 0.00 37.74 5.80
43 44 1.197036 GAAAGTCGTTGTGCTAAGGCC 59.803 52.381 0.00 0.00 37.74 5.19
44 45 1.197036 GGAAAGTCGTTGTGCTAAGGC 59.803 52.381 0.00 0.00 39.26 4.35
45 46 1.459592 CGGAAAGTCGTTGTGCTAAGG 59.540 52.381 0.00 0.00 0.00 2.69
46 47 2.155155 GTCGGAAAGTCGTTGTGCTAAG 59.845 50.000 0.00 0.00 0.00 2.18
47 48 2.129607 GTCGGAAAGTCGTTGTGCTAA 58.870 47.619 0.00 0.00 0.00 3.09
48 49 1.338973 AGTCGGAAAGTCGTTGTGCTA 59.661 47.619 0.00 0.00 0.00 3.49
49 50 0.104304 AGTCGGAAAGTCGTTGTGCT 59.896 50.000 0.00 0.00 0.00 4.40
50 51 0.232303 CAGTCGGAAAGTCGTTGTGC 59.768 55.000 0.00 0.00 0.00 4.57
51 52 1.521423 GACAGTCGGAAAGTCGTTGTG 59.479 52.381 0.00 0.00 32.66 3.33
52 53 1.407979 AGACAGTCGGAAAGTCGTTGT 59.592 47.619 0.00 0.00 37.36 3.32
53 54 2.135664 AGACAGTCGGAAAGTCGTTG 57.864 50.000 0.00 0.00 37.36 4.10
54 55 2.883386 AGTAGACAGTCGGAAAGTCGTT 59.117 45.455 0.00 0.00 37.36 3.85
55 56 2.502295 AGTAGACAGTCGGAAAGTCGT 58.498 47.619 0.00 0.00 37.36 4.34
56 57 3.434641 TGTAGTAGACAGTCGGAAAGTCG 59.565 47.826 0.00 0.00 37.36 4.18
57 58 5.152804 GTTGTAGTAGACAGTCGGAAAGTC 58.847 45.833 0.00 3.60 39.88 3.01
58 59 4.581824 TGTTGTAGTAGACAGTCGGAAAGT 59.418 41.667 0.00 0.00 39.88 2.66
59 60 5.117355 TGTTGTAGTAGACAGTCGGAAAG 57.883 43.478 0.00 0.00 39.88 2.62
60 61 5.284079 GTTGTTGTAGTAGACAGTCGGAAA 58.716 41.667 0.00 0.00 39.88 3.13
61 62 4.555313 CGTTGTTGTAGTAGACAGTCGGAA 60.555 45.833 0.00 0.00 39.88 4.30
62 63 3.058708 CGTTGTTGTAGTAGACAGTCGGA 60.059 47.826 0.00 0.00 39.88 4.55
63 64 3.231965 CGTTGTTGTAGTAGACAGTCGG 58.768 50.000 0.00 0.00 39.88 4.79
64 65 3.881795 ACGTTGTTGTAGTAGACAGTCG 58.118 45.455 0.00 0.00 39.88 4.18
65 66 5.555818 GCAAACGTTGTTGTAGTAGACAGTC 60.556 44.000 0.00 0.00 39.88 3.51
66 67 4.269363 GCAAACGTTGTTGTAGTAGACAGT 59.731 41.667 0.00 0.00 39.88 3.55
67 68 4.318546 GGCAAACGTTGTTGTAGTAGACAG 60.319 45.833 0.00 0.00 39.88 3.51
68 69 3.556775 GGCAAACGTTGTTGTAGTAGACA 59.443 43.478 0.00 0.00 35.78 3.41
69 70 3.059393 GGGCAAACGTTGTTGTAGTAGAC 60.059 47.826 0.00 0.00 0.00 2.59
70 71 3.132925 GGGCAAACGTTGTTGTAGTAGA 58.867 45.455 0.00 0.00 0.00 2.59
71 72 2.096614 CGGGCAAACGTTGTTGTAGTAG 60.097 50.000 0.00 0.00 0.00 2.57
72 73 1.865970 CGGGCAAACGTTGTTGTAGTA 59.134 47.619 0.00 0.00 0.00 1.82
73 74 0.658897 CGGGCAAACGTTGTTGTAGT 59.341 50.000 0.00 0.00 0.00 2.73
74 75 0.938713 TCGGGCAAACGTTGTTGTAG 59.061 50.000 0.00 0.00 34.94 2.74
75 76 0.656785 GTCGGGCAAACGTTGTTGTA 59.343 50.000 0.00 0.00 34.94 2.41
76 77 1.027792 AGTCGGGCAAACGTTGTTGT 61.028 50.000 0.00 0.00 34.94 3.32
77 78 0.099791 AAGTCGGGCAAACGTTGTTG 59.900 50.000 0.00 0.00 34.94 3.33
78 79 0.379316 GAAGTCGGGCAAACGTTGTT 59.621 50.000 0.00 0.00 34.94 2.83
79 80 0.745128 TGAAGTCGGGCAAACGTTGT 60.745 50.000 0.00 0.00 34.94 3.32
80 81 0.041312 CTGAAGTCGGGCAAACGTTG 60.041 55.000 0.00 0.00 34.94 4.10
81 82 1.782028 GCTGAAGTCGGGCAAACGTT 61.782 55.000 0.00 0.00 34.94 3.99
82 83 2.251642 GCTGAAGTCGGGCAAACGT 61.252 57.895 0.00 0.00 34.94 3.99
83 84 2.556287 GCTGAAGTCGGGCAAACG 59.444 61.111 0.00 0.00 0.00 3.60
84 85 1.298859 ATCGCTGAAGTCGGGCAAAC 61.299 55.000 0.00 0.00 0.00 2.93
85 86 1.003839 ATCGCTGAAGTCGGGCAAA 60.004 52.632 0.00 0.00 0.00 3.68
86 87 1.741401 CATCGCTGAAGTCGGGCAA 60.741 57.895 0.00 0.00 0.00 4.52
87 88 2.125552 CATCGCTGAAGTCGGGCA 60.126 61.111 0.00 0.00 0.00 5.36
88 89 2.892425 CCATCGCTGAAGTCGGGC 60.892 66.667 0.00 0.00 0.00 6.13
89 90 1.227089 CTCCATCGCTGAAGTCGGG 60.227 63.158 0.00 0.00 0.00 5.14
90 91 1.227089 CCTCCATCGCTGAAGTCGG 60.227 63.158 0.00 0.00 0.00 4.79
91 92 1.227089 CCCTCCATCGCTGAAGTCG 60.227 63.158 0.00 0.00 0.00 4.18
92 93 1.144936 CCCCTCCATCGCTGAAGTC 59.855 63.158 0.00 0.00 0.00 3.01
93 94 3.036429 GCCCCTCCATCGCTGAAGT 62.036 63.158 0.00 0.00 0.00 3.01
94 95 2.203126 GCCCCTCCATCGCTGAAG 60.203 66.667 0.00 0.00 0.00 3.02
95 96 4.161295 CGCCCCTCCATCGCTGAA 62.161 66.667 0.00 0.00 0.00 3.02
97 98 3.933722 ATCGCCCCTCCATCGCTG 61.934 66.667 0.00 0.00 0.00 5.18
98 99 3.933722 CATCGCCCCTCCATCGCT 61.934 66.667 0.00 0.00 0.00 4.93
99 100 1.888436 TATCATCGCCCCTCCATCGC 61.888 60.000 0.00 0.00 0.00 4.58
100 101 0.174389 CTATCATCGCCCCTCCATCG 59.826 60.000 0.00 0.00 0.00 3.84
101 102 0.107945 GCTATCATCGCCCCTCCATC 60.108 60.000 0.00 0.00 0.00 3.51
102 103 1.892819 CGCTATCATCGCCCCTCCAT 61.893 60.000 0.00 0.00 0.00 3.41
103 104 2.574018 CGCTATCATCGCCCCTCCA 61.574 63.158 0.00 0.00 0.00 3.86
104 105 2.262915 CGCTATCATCGCCCCTCC 59.737 66.667 0.00 0.00 0.00 4.30
105 106 2.262915 CCGCTATCATCGCCCCTC 59.737 66.667 0.00 0.00 0.00 4.30
106 107 4.008933 GCCGCTATCATCGCCCCT 62.009 66.667 0.00 0.00 0.00 4.79
128 129 2.734673 GCACTGAAGCGAGCCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
129 130 2.715532 AAGCACTGAAGCGAGCCGAA 62.716 55.000 0.00 0.00 40.15 4.30
130 131 3.226429 AAGCACTGAAGCGAGCCGA 62.226 57.895 0.00 0.00 40.15 5.54
131 132 2.740055 AAGCACTGAAGCGAGCCG 60.740 61.111 0.00 0.00 40.15 5.52
132 133 0.670546 TACAAGCACTGAAGCGAGCC 60.671 55.000 0.00 0.00 40.15 4.70
133 134 1.148310 TTACAAGCACTGAAGCGAGC 58.852 50.000 0.00 0.00 40.15 5.03
134 135 2.028523 CGATTACAAGCACTGAAGCGAG 59.971 50.000 0.00 0.00 40.15 5.03
135 136 1.992667 CGATTACAAGCACTGAAGCGA 59.007 47.619 0.00 0.00 40.15 4.93
136 137 1.726791 ACGATTACAAGCACTGAAGCG 59.273 47.619 0.00 0.00 40.15 4.68
137 138 2.736721 TGACGATTACAAGCACTGAAGC 59.263 45.455 0.00 0.00 0.00 3.86
138 139 3.990469 AGTGACGATTACAAGCACTGAAG 59.010 43.478 0.00 0.00 38.30 3.02
139 140 3.990092 AGTGACGATTACAAGCACTGAA 58.010 40.909 0.00 0.00 38.30 3.02
140 141 3.660501 AGTGACGATTACAAGCACTGA 57.339 42.857 0.00 0.00 38.30 3.41
141 142 3.859961 CCTAGTGACGATTACAAGCACTG 59.140 47.826 0.00 0.00 39.84 3.66
142 143 3.510360 ACCTAGTGACGATTACAAGCACT 59.490 43.478 0.00 0.00 42.04 4.40
143 144 3.612860 CACCTAGTGACGATTACAAGCAC 59.387 47.826 0.00 0.00 35.23 4.40
144 145 3.368013 CCACCTAGTGACGATTACAAGCA 60.368 47.826 0.00 0.00 35.23 3.91
145 146 3.187700 CCACCTAGTGACGATTACAAGC 58.812 50.000 0.00 0.00 35.23 4.01
146 147 4.158025 AGACCACCTAGTGACGATTACAAG 59.842 45.833 0.00 0.00 35.23 3.16
147 148 4.084287 AGACCACCTAGTGACGATTACAA 58.916 43.478 0.00 0.00 35.23 2.41
148 149 3.693807 AGACCACCTAGTGACGATTACA 58.306 45.455 0.00 0.00 35.23 2.41
149 150 4.260538 CGTAGACCACCTAGTGACGATTAC 60.261 50.000 0.00 0.00 33.83 1.89
150 151 3.873361 CGTAGACCACCTAGTGACGATTA 59.127 47.826 0.00 0.00 33.83 1.75
151 152 2.681848 CGTAGACCACCTAGTGACGATT 59.318 50.000 0.00 0.00 33.83 3.34
152 153 2.286872 CGTAGACCACCTAGTGACGAT 58.713 52.381 0.00 0.00 33.83 3.73
153 154 1.676916 CCGTAGACCACCTAGTGACGA 60.677 57.143 7.89 0.00 33.83 4.20
154 155 0.731417 CCGTAGACCACCTAGTGACG 59.269 60.000 0.00 0.00 35.23 4.35
155 156 2.119801 TCCGTAGACCACCTAGTGAC 57.880 55.000 0.00 0.00 35.23 3.67
156 157 2.508716 AGATCCGTAGACCACCTAGTGA 59.491 50.000 0.00 0.00 35.23 3.41
157 158 2.933573 AGATCCGTAGACCACCTAGTG 58.066 52.381 0.00 0.00 0.00 2.74
158 159 3.053842 TCAAGATCCGTAGACCACCTAGT 60.054 47.826 0.00 0.00 0.00 2.57
159 160 3.552875 TCAAGATCCGTAGACCACCTAG 58.447 50.000 0.00 0.00 0.00 3.02
160 161 3.657398 TCAAGATCCGTAGACCACCTA 57.343 47.619 0.00 0.00 0.00 3.08
161 162 2.526888 TCAAGATCCGTAGACCACCT 57.473 50.000 0.00 0.00 0.00 4.00
162 163 2.431057 ACATCAAGATCCGTAGACCACC 59.569 50.000 0.00 0.00 0.00 4.61
163 164 3.802948 ACATCAAGATCCGTAGACCAC 57.197 47.619 0.00 0.00 0.00 4.16
164 165 6.479972 AATTACATCAAGATCCGTAGACCA 57.520 37.500 0.00 0.00 0.00 4.02
165 166 7.787725 AAAATTACATCAAGATCCGTAGACC 57.212 36.000 0.00 0.00 0.00 3.85
191 192 9.578439 GGTAGTACAACGAACACTAGAAATAAT 57.422 33.333 2.06 0.00 0.00 1.28
192 193 8.575589 TGGTAGTACAACGAACACTAGAAATAA 58.424 33.333 2.06 0.00 0.00 1.40
193 194 8.109705 TGGTAGTACAACGAACACTAGAAATA 57.890 34.615 2.06 0.00 0.00 1.40
194 195 6.985117 TGGTAGTACAACGAACACTAGAAAT 58.015 36.000 2.06 0.00 0.00 2.17
195 196 6.389830 TGGTAGTACAACGAACACTAGAAA 57.610 37.500 2.06 0.00 0.00 2.52
196 197 6.207221 TCATGGTAGTACAACGAACACTAGAA 59.793 38.462 2.06 0.00 0.00 2.10
197 198 5.706833 TCATGGTAGTACAACGAACACTAGA 59.293 40.000 2.06 0.00 0.00 2.43
198 199 5.946298 TCATGGTAGTACAACGAACACTAG 58.054 41.667 2.06 0.00 0.00 2.57
199 200 5.963176 TCATGGTAGTACAACGAACACTA 57.037 39.130 2.06 0.00 0.00 2.74
200 201 4.859304 TCATGGTAGTACAACGAACACT 57.141 40.909 2.06 0.00 0.00 3.55
201 202 5.636121 TCAATCATGGTAGTACAACGAACAC 59.364 40.000 2.06 0.00 0.00 3.32
202 203 5.785243 TCAATCATGGTAGTACAACGAACA 58.215 37.500 2.06 0.00 0.00 3.18
203 204 6.588756 TCTTCAATCATGGTAGTACAACGAAC 59.411 38.462 2.06 0.00 0.00 3.95
204 205 6.693466 TCTTCAATCATGGTAGTACAACGAA 58.307 36.000 2.06 0.00 0.00 3.85
205 206 6.275494 TCTTCAATCATGGTAGTACAACGA 57.725 37.500 2.06 0.00 0.00 3.85
206 207 6.756542 TCATCTTCAATCATGGTAGTACAACG 59.243 38.462 2.06 0.00 0.00 4.10
207 208 8.492673 TTCATCTTCAATCATGGTAGTACAAC 57.507 34.615 2.06 0.00 0.00 3.32
209 210 9.987272 CTATTCATCTTCAATCATGGTAGTACA 57.013 33.333 2.06 0.00 0.00 2.90
210 211 9.429359 CCTATTCATCTTCAATCATGGTAGTAC 57.571 37.037 0.00 0.00 0.00 2.73
211 212 9.159254 ACCTATTCATCTTCAATCATGGTAGTA 57.841 33.333 0.00 0.00 0.00 1.82
212 213 8.038862 ACCTATTCATCTTCAATCATGGTAGT 57.961 34.615 0.00 0.00 0.00 2.73
213 214 8.781196 CAACCTATTCATCTTCAATCATGGTAG 58.219 37.037 0.00 0.00 0.00 3.18
214 215 8.493607 TCAACCTATTCATCTTCAATCATGGTA 58.506 33.333 0.00 0.00 0.00 3.25
215 216 7.348815 TCAACCTATTCATCTTCAATCATGGT 58.651 34.615 0.00 0.00 0.00 3.55
216 217 7.812690 TCAACCTATTCATCTTCAATCATGG 57.187 36.000 0.00 0.00 0.00 3.66
217 218 9.731819 CTTTCAACCTATTCATCTTCAATCATG 57.268 33.333 0.00 0.00 0.00 3.07
218 219 9.471702 ACTTTCAACCTATTCATCTTCAATCAT 57.528 29.630 0.00 0.00 0.00 2.45
219 220 8.868522 ACTTTCAACCTATTCATCTTCAATCA 57.131 30.769 0.00 0.00 0.00 2.57
223 224 9.965824 GAAAAACTTTCAACCTATTCATCTTCA 57.034 29.630 0.00 0.00 0.00 3.02
224 225 9.411801 GGAAAAACTTTCAACCTATTCATCTTC 57.588 33.333 1.88 0.00 0.00 2.87
225 226 9.147732 AGGAAAAACTTTCAACCTATTCATCTT 57.852 29.630 1.88 0.00 0.00 2.40
226 227 8.579863 CAGGAAAAACTTTCAACCTATTCATCT 58.420 33.333 1.88 0.00 0.00 2.90
227 228 7.329471 GCAGGAAAAACTTTCAACCTATTCATC 59.671 37.037 1.88 0.00 0.00 2.92
228 229 7.154656 GCAGGAAAAACTTTCAACCTATTCAT 58.845 34.615 1.88 0.00 0.00 2.57
229 230 6.097554 TGCAGGAAAAACTTTCAACCTATTCA 59.902 34.615 1.88 0.00 0.00 2.57
230 231 6.512297 TGCAGGAAAAACTTTCAACCTATTC 58.488 36.000 1.88 0.00 0.00 1.75
231 232 6.478512 TGCAGGAAAAACTTTCAACCTATT 57.521 33.333 1.88 0.00 0.00 1.73
232 233 6.478512 TTGCAGGAAAAACTTTCAACCTAT 57.521 33.333 1.88 0.00 0.00 2.57
233 234 5.923733 TTGCAGGAAAAACTTTCAACCTA 57.076 34.783 1.88 0.00 0.00 3.08
234 235 4.817318 TTGCAGGAAAAACTTTCAACCT 57.183 36.364 1.88 0.00 0.00 3.50
235 236 6.435430 AAATTGCAGGAAAAACTTTCAACC 57.565 33.333 1.88 0.00 0.00 3.77
259 260 6.239008 CCAAGACTTCATGGCAAGAGTAAAAA 60.239 38.462 0.00 0.00 0.00 1.94
260 261 5.241506 CCAAGACTTCATGGCAAGAGTAAAA 59.758 40.000 0.00 0.00 0.00 1.52
261 262 4.761739 CCAAGACTTCATGGCAAGAGTAAA 59.238 41.667 0.00 0.00 0.00 2.01
262 263 4.041567 TCCAAGACTTCATGGCAAGAGTAA 59.958 41.667 0.00 0.00 34.89 2.24
263 264 3.582647 TCCAAGACTTCATGGCAAGAGTA 59.417 43.478 0.00 0.00 34.89 2.59
264 265 2.373169 TCCAAGACTTCATGGCAAGAGT 59.627 45.455 0.00 0.00 34.89 3.24
265 266 3.063510 TCCAAGACTTCATGGCAAGAG 57.936 47.619 0.00 0.00 34.89 2.85
266 267 3.507162 TTCCAAGACTTCATGGCAAGA 57.493 42.857 0.00 0.00 34.89 3.02
267 268 4.202141 TGTTTTCCAAGACTTCATGGCAAG 60.202 41.667 0.00 0.00 34.89 4.01
268 269 3.703556 TGTTTTCCAAGACTTCATGGCAA 59.296 39.130 0.00 0.00 34.89 4.52
269 270 3.295093 TGTTTTCCAAGACTTCATGGCA 58.705 40.909 0.00 0.00 34.89 4.92
270 271 4.240096 CATGTTTTCCAAGACTTCATGGC 58.760 43.478 0.00 0.00 34.89 4.40
271 272 4.240096 GCATGTTTTCCAAGACTTCATGG 58.760 43.478 11.93 0.00 36.14 3.66
272 273 4.240096 GGCATGTTTTCCAAGACTTCATG 58.760 43.478 7.57 7.57 35.69 3.07
273 274 3.896888 TGGCATGTTTTCCAAGACTTCAT 59.103 39.130 0.00 0.00 0.00 2.57
274 275 3.068024 GTGGCATGTTTTCCAAGACTTCA 59.932 43.478 0.00 0.00 33.57 3.02
275 276 3.642705 GTGGCATGTTTTCCAAGACTTC 58.357 45.455 0.00 0.00 33.57 3.01
276 277 2.034558 CGTGGCATGTTTTCCAAGACTT 59.965 45.455 0.00 0.00 34.43 3.01
277 278 1.608590 CGTGGCATGTTTTCCAAGACT 59.391 47.619 0.00 0.00 34.43 3.24
278 279 1.930371 GCGTGGCATGTTTTCCAAGAC 60.930 52.381 8.75 0.00 34.43 3.01
279 280 0.313672 GCGTGGCATGTTTTCCAAGA 59.686 50.000 8.75 0.00 34.43 3.02
280 281 0.031857 TGCGTGGCATGTTTTCCAAG 59.968 50.000 8.75 0.00 33.57 3.61
281 282 0.461548 TTGCGTGGCATGTTTTCCAA 59.538 45.000 8.75 0.68 38.76 3.53
282 283 0.461548 TTTGCGTGGCATGTTTTCCA 59.538 45.000 8.75 0.00 38.76 3.53
283 284 1.726248 GATTTGCGTGGCATGTTTTCC 59.274 47.619 8.75 0.00 38.76 3.13
284 285 2.676076 AGATTTGCGTGGCATGTTTTC 58.324 42.857 8.75 1.33 38.76 2.29
285 286 2.818130 AGATTTGCGTGGCATGTTTT 57.182 40.000 8.75 0.00 38.76 2.43
286 287 2.818130 AAGATTTGCGTGGCATGTTT 57.182 40.000 8.75 0.00 38.76 2.83
287 288 2.801679 CAAAAGATTTGCGTGGCATGTT 59.198 40.909 8.75 0.00 38.76 2.71
288 289 2.224018 ACAAAAGATTTGCGTGGCATGT 60.224 40.909 8.75 0.00 38.76 3.21
289 290 2.406130 ACAAAAGATTTGCGTGGCATG 58.594 42.857 1.31 1.31 38.76 4.06
290 291 2.818130 ACAAAAGATTTGCGTGGCAT 57.182 40.000 2.88 0.00 38.76 4.40
291 292 2.593346 AACAAAAGATTTGCGTGGCA 57.407 40.000 2.88 0.00 36.47 4.92
292 293 3.896122 TCTAACAAAAGATTTGCGTGGC 58.104 40.909 2.88 0.00 0.00 5.01
293 294 5.460646 ACATCTAACAAAAGATTTGCGTGG 58.539 37.500 2.88 0.00 33.87 4.94
294 295 6.991485 AACATCTAACAAAAGATTTGCGTG 57.009 33.333 2.88 0.00 33.87 5.34
295 296 9.691362 AATTAACATCTAACAAAAGATTTGCGT 57.309 25.926 2.88 0.00 33.87 5.24
320 321 6.419484 TCCATACAGAGAAAGACAGACAAA 57.581 37.500 0.00 0.00 0.00 2.83
331 332 9.935241 GCTCATATTTAGAATCCATACAGAGAA 57.065 33.333 0.00 0.00 0.00 2.87
356 357 5.046950 TGGAAAACACATGTATTAAAGGGGC 60.047 40.000 0.00 0.00 0.00 5.80
379 380 3.855379 CGAGGATGACATGCACAAATTTG 59.145 43.478 16.67 16.67 0.00 2.32
380 381 3.674138 GCGAGGATGACATGCACAAATTT 60.674 43.478 9.80 0.00 0.00 1.82
390 391 4.887655 TCCATATATACGCGAGGATGACAT 59.112 41.667 15.93 0.00 35.28 3.06
400 401 7.527183 CGCATATTTTGAATCCATATATACGCG 59.473 37.037 3.53 3.53 0.00 6.01
404 405 7.230510 GGGGCGCATATTTTGAATCCATATATA 59.769 37.037 10.83 0.00 0.00 0.86
405 406 6.040842 GGGGCGCATATTTTGAATCCATATAT 59.959 38.462 10.83 0.00 0.00 0.86
406 407 5.359576 GGGGCGCATATTTTGAATCCATATA 59.640 40.000 10.83 0.00 0.00 0.86
407 408 4.160252 GGGGCGCATATTTTGAATCCATAT 59.840 41.667 10.83 0.00 0.00 1.78
438 444 3.769739 TCGGAAACATCCCATCCTATG 57.230 47.619 0.00 0.00 0.00 2.23
441 447 1.212935 CCTTCGGAAACATCCCATCCT 59.787 52.381 0.00 0.00 0.00 3.24
447 453 0.393944 GGGTCCCTTCGGAAACATCC 60.394 60.000 0.00 0.00 40.92 3.51
448 454 0.618981 AGGGTCCCTTCGGAAACATC 59.381 55.000 3.85 0.00 40.92 3.06
449 455 1.073098 AAGGGTCCCTTCGGAAACAT 58.927 50.000 18.29 0.00 40.17 2.71
450 456 0.848053 AAAGGGTCCCTTCGGAAACA 59.152 50.000 24.01 0.00 43.92 2.83
451 457 2.865119 TAAAGGGTCCCTTCGGAAAC 57.135 50.000 24.01 0.00 43.92 2.78
452 458 3.845398 TGTATAAAGGGTCCCTTCGGAAA 59.155 43.478 24.01 7.36 43.92 3.13
453 459 3.452878 TGTATAAAGGGTCCCTTCGGAA 58.547 45.455 24.01 10.15 43.92 4.30
454 460 3.119009 TGTATAAAGGGTCCCTTCGGA 57.881 47.619 24.01 12.45 43.92 4.55
595 614 1.799933 AAATGAAGTTTGTGGGGGCA 58.200 45.000 0.00 0.00 0.00 5.36
630 649 5.257082 ACAAAAATGAAGTTTGTACCGCT 57.743 34.783 0.86 0.00 45.11 5.52
675 730 7.074366 TCAAGTGATGGGTTTGGGGATAATATA 59.926 37.037 0.00 0.00 0.00 0.86
681 736 1.715931 TCAAGTGATGGGTTTGGGGAT 59.284 47.619 0.00 0.00 0.00 3.85
690 745 5.762218 GGTCATCTATTTCTCAAGTGATGGG 59.238 44.000 0.00 0.00 34.03 4.00
691 746 5.762218 GGGTCATCTATTTCTCAAGTGATGG 59.238 44.000 0.00 0.00 34.03 3.51
694 749 6.173339 GTTGGGTCATCTATTTCTCAAGTGA 58.827 40.000 0.00 0.00 0.00 3.41
708 763 8.357402 ACAAAGTTAGTAAAATGTTGGGTCATC 58.643 33.333 0.00 0.00 0.00 2.92
738 793 8.762481 AGGGAACTCAACTTTGTACTATTTTT 57.238 30.769 0.00 0.00 32.90 1.94
758 813 4.072131 CAAATTTTCTCAGACGGAGGGAA 58.928 43.478 2.63 0.00 44.19 3.97
759 814 3.072476 ACAAATTTTCTCAGACGGAGGGA 59.928 43.478 2.63 0.00 44.19 4.20
760 815 3.412386 ACAAATTTTCTCAGACGGAGGG 58.588 45.455 2.63 0.00 44.19 4.30
761 816 3.437049 GGACAAATTTTCTCAGACGGAGG 59.563 47.826 2.63 0.00 44.19 4.30
762 817 4.319177 AGGACAAATTTTCTCAGACGGAG 58.681 43.478 0.00 0.00 45.49 4.63
764 819 4.515191 TCAAGGACAAATTTTCTCAGACGG 59.485 41.667 0.00 0.00 0.00 4.79
765 820 5.673337 TCAAGGACAAATTTTCTCAGACG 57.327 39.130 0.00 0.00 0.00 4.18
766 821 7.383300 CCATTTCAAGGACAAATTTTCTCAGAC 59.617 37.037 0.00 0.00 0.00 3.51
767 822 7.287466 TCCATTTCAAGGACAAATTTTCTCAGA 59.713 33.333 0.00 0.00 0.00 3.27
768 823 7.436118 TCCATTTCAAGGACAAATTTTCTCAG 58.564 34.615 0.00 0.00 0.00 3.35
769 824 7.358770 TCCATTTCAAGGACAAATTTTCTCA 57.641 32.000 0.00 0.00 0.00 3.27
770 825 7.874528 ACATCCATTTCAAGGACAAATTTTCTC 59.125 33.333 0.00 0.00 38.13 2.87
771 826 7.738847 ACATCCATTTCAAGGACAAATTTTCT 58.261 30.769 0.00 0.00 38.13 2.52
772 827 7.967890 ACATCCATTTCAAGGACAAATTTTC 57.032 32.000 0.00 0.00 38.13 2.29
773 828 9.657419 GATACATCCATTTCAAGGACAAATTTT 57.343 29.630 0.00 0.00 38.13 1.82
774 829 9.039165 AGATACATCCATTTCAAGGACAAATTT 57.961 29.630 0.00 0.00 38.13 1.82
775 830 8.599624 AGATACATCCATTTCAAGGACAAATT 57.400 30.769 0.00 0.00 38.13 1.82
776 831 9.347240 CTAGATACATCCATTTCAAGGACAAAT 57.653 33.333 0.00 0.00 38.13 2.32
777 832 8.328758 ACTAGATACATCCATTTCAAGGACAAA 58.671 33.333 0.00 0.00 38.13 2.83
778 833 7.861629 ACTAGATACATCCATTTCAAGGACAA 58.138 34.615 0.00 0.00 38.13 3.18
779 834 7.437713 ACTAGATACATCCATTTCAAGGACA 57.562 36.000 0.00 0.00 38.13 4.02
780 835 9.646427 GATACTAGATACATCCATTTCAAGGAC 57.354 37.037 0.00 0.00 38.13 3.85
781 836 9.379770 TGATACTAGATACATCCATTTCAAGGA 57.620 33.333 0.00 0.00 39.97 3.36
790 845 8.577296 GCACTAACTTGATACTAGATACATCCA 58.423 37.037 0.00 0.00 0.00 3.41
791 846 8.798402 AGCACTAACTTGATACTAGATACATCC 58.202 37.037 0.00 0.00 0.00 3.51
801 856 8.085296 GCATGTATCTAGCACTAACTTGATACT 58.915 37.037 19.43 8.67 46.52 2.12
802 857 7.867909 TGCATGTATCTAGCACTAACTTGATAC 59.132 37.037 14.90 14.90 46.54 2.24
803 858 7.951591 TGCATGTATCTAGCACTAACTTGATA 58.048 34.615 0.00 0.00 34.60 2.15
804 859 6.820335 TGCATGTATCTAGCACTAACTTGAT 58.180 36.000 0.00 0.00 36.37 2.57
805 860 6.220726 TGCATGTATCTAGCACTAACTTGA 57.779 37.500 0.00 0.00 32.55 3.02
806 861 6.927936 AGATGCATGTATCTAGCACTAACTTG 59.072 38.462 22.99 0.00 41.60 3.16
807 862 6.927936 CAGATGCATGTATCTAGCACTAACTT 59.072 38.462 23.66 0.00 41.60 2.66
808 863 6.266330 TCAGATGCATGTATCTAGCACTAACT 59.734 38.462 23.66 0.00 41.60 2.24
809 864 6.450545 TCAGATGCATGTATCTAGCACTAAC 58.549 40.000 23.66 0.00 41.60 2.34
810 865 6.655078 TCAGATGCATGTATCTAGCACTAA 57.345 37.500 23.66 3.84 41.60 2.24
811 866 6.655078 TTCAGATGCATGTATCTAGCACTA 57.345 37.500 23.66 5.33 41.60 2.74
812 867 5.541953 TTCAGATGCATGTATCTAGCACT 57.458 39.130 23.66 0.80 41.60 4.40
813 868 6.609237 TTTTCAGATGCATGTATCTAGCAC 57.391 37.500 23.66 0.00 41.60 4.40
814 869 7.812690 ATTTTTCAGATGCATGTATCTAGCA 57.187 32.000 23.66 9.91 43.14 3.49
815 870 9.823098 CTTATTTTTCAGATGCATGTATCTAGC 57.177 33.333 23.66 0.00 35.70 3.42
820 875 9.590451 CCAAACTTATTTTTCAGATGCATGTAT 57.410 29.630 2.46 0.00 0.00 2.29
821 876 8.034215 CCCAAACTTATTTTTCAGATGCATGTA 58.966 33.333 2.46 0.00 0.00 2.29
822 877 6.875195 CCCAAACTTATTTTTCAGATGCATGT 59.125 34.615 2.46 0.00 0.00 3.21
823 878 7.063780 GTCCCAAACTTATTTTTCAGATGCATG 59.936 37.037 2.46 0.00 0.00 4.06
824 879 7.099120 GTCCCAAACTTATTTTTCAGATGCAT 58.901 34.615 0.00 0.00 0.00 3.96
825 880 6.041409 TGTCCCAAACTTATTTTTCAGATGCA 59.959 34.615 0.00 0.00 0.00 3.96
826 881 6.454795 TGTCCCAAACTTATTTTTCAGATGC 58.545 36.000 0.00 0.00 0.00 3.91
827 882 8.143835 ACTTGTCCCAAACTTATTTTTCAGATG 58.856 33.333 0.00 0.00 0.00 2.90
828 883 8.250143 ACTTGTCCCAAACTTATTTTTCAGAT 57.750 30.769 0.00 0.00 0.00 2.90
829 884 7.654022 ACTTGTCCCAAACTTATTTTTCAGA 57.346 32.000 0.00 0.00 0.00 3.27
830 885 8.716646 AAACTTGTCCCAAACTTATTTTTCAG 57.283 30.769 0.00 0.00 0.00 3.02
831 886 9.508642 AAAAACTTGTCCCAAACTTATTTTTCA 57.491 25.926 0.00 0.00 0.00 2.69
854 909 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
855 910 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
856 911 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
857 912 2.511659 CATATACTCCCTCCGTCCGAA 58.488 52.381 0.00 0.00 0.00 4.30
858 913 1.885359 GCATATACTCCCTCCGTCCGA 60.885 57.143 0.00 0.00 0.00 4.55
859 914 0.526662 GCATATACTCCCTCCGTCCG 59.473 60.000 0.00 0.00 0.00 4.79
860 915 1.926108 AGCATATACTCCCTCCGTCC 58.074 55.000 0.00 0.00 0.00 4.79
861 916 5.662674 ATTTAGCATATACTCCCTCCGTC 57.337 43.478 0.00 0.00 0.00 4.79
862 917 5.046520 GGAATTTAGCATATACTCCCTCCGT 60.047 44.000 0.00 0.00 0.00 4.69
863 918 5.187967 AGGAATTTAGCATATACTCCCTCCG 59.812 44.000 0.00 0.00 0.00 4.63
864 919 6.352308 GGAGGAATTTAGCATATACTCCCTCC 60.352 46.154 0.00 0.00 46.15 4.30
865 920 6.442244 AGGAGGAATTTAGCATATACTCCCTC 59.558 42.308 0.00 0.00 43.21 4.30
866 921 6.335115 AGGAGGAATTTAGCATATACTCCCT 58.665 40.000 0.00 0.00 43.21 4.20
867 922 6.628644 AGGAGGAATTTAGCATATACTCCC 57.371 41.667 0.00 0.00 43.21 4.30
868 923 7.557724 GGTAGGAGGAATTTAGCATATACTCC 58.442 42.308 0.00 0.00 42.68 3.85
869 924 7.259161 CGGTAGGAGGAATTTAGCATATACTC 58.741 42.308 0.00 0.00 0.00 2.59
870 925 6.351117 GCGGTAGGAGGAATTTAGCATATACT 60.351 42.308 0.00 0.00 0.00 2.12
871 926 5.811100 GCGGTAGGAGGAATTTAGCATATAC 59.189 44.000 0.00 0.00 0.00 1.47
880 935 2.599216 TCCGCGGTAGGAGGAATTT 58.401 52.632 27.15 0.00 42.12 1.82
889 944 0.515564 CCAAAACACTTCCGCGGTAG 59.484 55.000 27.86 27.86 0.00 3.18
942 997 0.611340 ACCTCCGGTTAACGCTCTCT 60.611 55.000 0.00 0.00 42.52 3.10
1538 1614 2.202676 CCTCGAGAGCGGTGAAGC 60.203 66.667 15.71 0.00 38.28 3.86
1785 4603 2.766229 TAGGCGGGCATGTAGGCA 60.766 61.111 3.78 0.00 46.44 4.75
2053 4885 7.098074 AGAAGGTTATCCGTAAGACAGTAAG 57.902 40.000 0.00 0.00 43.02 2.34
2066 4898 5.767168 AGCATAGCAATGAAGAAGGTTATCC 59.233 40.000 0.00 0.00 34.84 2.59
2335 5223 5.713792 TTGTCAAGGTCACAAGACAAAAA 57.286 34.783 6.50 0.00 45.01 1.94
2371 5259 5.389778 CGCAAGCAACAATACAATGACTAA 58.610 37.500 0.00 0.00 0.00 2.24
2393 5281 8.948853 TTCAAAATAAGTAAGAATGTCAAGCG 57.051 30.769 0.00 0.00 0.00 4.68
2550 5447 1.337260 ACAAGTCGTCATCCAGCTCAC 60.337 52.381 0.00 0.00 0.00 3.51
2585 5482 3.037549 CCTCTAGCCCATCTTTCTCTGT 58.962 50.000 0.00 0.00 0.00 3.41
2645 5557 4.017037 TCCCTCTGACAACTCTTCCTCTAT 60.017 45.833 0.00 0.00 0.00 1.98
2873 5833 4.210955 GCTTACTAGCTGCATCTCATTGTC 59.789 45.833 1.02 0.00 44.27 3.18
3167 8138 7.011499 TCTTTGTCTTACCTAATGGTTGCTA 57.989 36.000 0.00 0.00 46.05 3.49
3333 8304 4.892934 ACTTTCTTATCCAACAACAAGGCA 59.107 37.500 0.00 0.00 0.00 4.75
3361 8332 6.037610 AGTCTCAGCTTTCTACAGTGTTTTTG 59.962 38.462 0.00 0.00 0.00 2.44
3427 8398 2.416547 CCAACTGATTGAACTACTGCGG 59.583 50.000 0.00 0.00 38.15 5.69
3429 8400 4.091509 CGTACCAACTGATTGAACTACTGC 59.908 45.833 0.00 0.00 38.15 4.40
3547 8519 5.815581 TGCCTGTTGAAACTCCATATAACT 58.184 37.500 0.00 0.00 0.00 2.24
3550 8522 6.000246 TGATGCCTGTTGAAACTCCATATA 58.000 37.500 0.00 0.00 0.00 0.86
3572 8544 3.721087 AGGGTACAGTTTCCAGGATTG 57.279 47.619 0.00 0.00 0.00 2.67
3586 8558 7.928235 GCCTCAGCTAACACCATTAGGGTAC 62.928 52.000 0.00 0.00 42.03 3.34
3600 8572 6.001449 AGTACATAATTTGGCCTCAGCTAA 57.999 37.500 3.32 0.00 37.75 3.09
3624 8596 4.790790 ACCCATTTTCCTCTGATTCTAGGT 59.209 41.667 5.79 0.00 34.30 3.08
3646 10569 7.712639 TCTTCCTATGATAACTCTTGCATTGAC 59.287 37.037 0.00 0.00 0.00 3.18
3665 10588 1.600058 TCCTCCGGTACCTCTTCCTA 58.400 55.000 10.90 0.00 0.00 2.94
3668 10591 2.140839 TCTTCCTCCGGTACCTCTTC 57.859 55.000 10.90 0.00 0.00 2.87
3675 10598 1.403814 CAGCTCATCTTCCTCCGGTA 58.596 55.000 0.00 0.00 0.00 4.02
3696 10619 3.063485 GCTCCTTCTGACAAGTCTTCAC 58.937 50.000 1.53 0.00 0.00 3.18
3717 10640 4.116747 AGCGTATCTTTCTCCAGTTCTG 57.883 45.455 0.00 0.00 0.00 3.02
3720 10643 4.339814 CCTCTAGCGTATCTTTCTCCAGTT 59.660 45.833 0.00 0.00 0.00 3.16
3739 10662 1.143620 GCATCTGCGCTCTTCCTCT 59.856 57.895 9.73 0.00 0.00 3.69
3787 10710 4.531854 CTCTAGTTCATCTCCCTCTGTCA 58.468 47.826 0.00 0.00 0.00 3.58
3791 10714 3.135279 TCCCTCTAGTTCATCTCCCTCT 58.865 50.000 0.00 0.00 0.00 3.69
3792 10715 3.496331 CTCCCTCTAGTTCATCTCCCTC 58.504 54.545 0.00 0.00 0.00 4.30
3793 10716 2.425683 GCTCCCTCTAGTTCATCTCCCT 60.426 54.545 0.00 0.00 0.00 4.20
3794 10717 1.967779 GCTCCCTCTAGTTCATCTCCC 59.032 57.143 0.00 0.00 0.00 4.30
3795 10718 2.627699 CAGCTCCCTCTAGTTCATCTCC 59.372 54.545 0.00 0.00 0.00 3.71
3796 10719 3.295973 ACAGCTCCCTCTAGTTCATCTC 58.704 50.000 0.00 0.00 0.00 2.75
3797 10720 3.295973 GACAGCTCCCTCTAGTTCATCT 58.704 50.000 0.00 0.00 0.00 2.90
3798 10721 3.027412 TGACAGCTCCCTCTAGTTCATC 58.973 50.000 0.00 0.00 0.00 2.92
3799 10722 3.030291 CTGACAGCTCCCTCTAGTTCAT 58.970 50.000 0.00 0.00 0.00 2.57
3800 10723 2.041755 TCTGACAGCTCCCTCTAGTTCA 59.958 50.000 0.00 0.00 0.00 3.18
3801 10724 2.687935 CTCTGACAGCTCCCTCTAGTTC 59.312 54.545 0.00 0.00 0.00 3.01
3802 10725 2.622977 CCTCTGACAGCTCCCTCTAGTT 60.623 54.545 0.00 0.00 0.00 2.24
3803 10726 1.064017 CCTCTGACAGCTCCCTCTAGT 60.064 57.143 0.00 0.00 0.00 2.57
3804 10727 1.691196 CCTCTGACAGCTCCCTCTAG 58.309 60.000 0.00 0.00 0.00 2.43
3805 10728 0.260230 CCCTCTGACAGCTCCCTCTA 59.740 60.000 0.00 0.00 0.00 2.43
3858 10781 5.241403 TCTGTAATTGCTTTTCCTCAGGA 57.759 39.130 0.00 0.00 0.00 3.86
3873 10796 4.044065 TCCATTGACCCCTGTTTCTGTAAT 59.956 41.667 0.00 0.00 0.00 1.89
3875 10798 2.983192 TCCATTGACCCCTGTTTCTGTA 59.017 45.455 0.00 0.00 0.00 2.74
3898 10821 5.555017 TGATTGCCCTCTATCAAATAGCTC 58.445 41.667 0.00 0.00 32.87 4.09
3905 10828 2.707791 CCCTCTGATTGCCCTCTATCAA 59.292 50.000 0.00 0.00 34.85 2.57
3910 10833 0.341258 TCTCCCTCTGATTGCCCTCT 59.659 55.000 0.00 0.00 0.00 3.69
3943 10866 3.904136 AAAGTTCTCAAAGCCATCGTG 57.096 42.857 0.00 0.00 0.00 4.35
3944 10867 5.003804 ACATAAAGTTCTCAAAGCCATCGT 58.996 37.500 0.00 0.00 0.00 3.73
3997 10920 3.128242 GCTTACAGCTGCATCTCATTGTT 59.872 43.478 15.27 0.00 38.45 2.83
4031 10955 5.047660 CAGTTGCTTGAGACTAGTAGACCTT 60.048 44.000 3.59 0.00 0.00 3.50
4033 10957 4.459685 TCAGTTGCTTGAGACTAGTAGACC 59.540 45.833 3.59 0.00 0.00 3.85
4069 10993 7.201956 GGAGCTCTTCTAGGTGATTAATCTTGA 60.202 40.741 14.64 0.81 35.60 3.02
4080 11004 2.430332 CCTTCTGGAGCTCTTCTAGGTG 59.570 54.545 14.64 4.48 35.60 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.