Multiple sequence alignment - TraesCS7A01G445700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G445700 chr7A 100.000 5687 0 0 1 5687 640575923 640581609 0.000000e+00 10503.0
1 TraesCS7A01G445700 chr7A 95.357 280 9 4 5127 5403 534834573 534834851 5.230000e-120 442.0
2 TraesCS7A01G445700 chr7A 100.000 50 0 0 5638 5687 640597915 640597964 6.070000e-15 93.5
3 TraesCS7A01G445700 chr7A 93.878 49 3 0 5639 5687 640666558 640666606 2.200000e-09 75.0
4 TraesCS7A01G445700 chr7B 95.278 2139 84 8 2392 4519 600990699 600992831 0.000000e+00 3374.0
5 TraesCS7A01G445700 chr7B 85.824 2208 154 71 297 2400 600988395 600990547 0.000000e+00 2196.0
6 TraesCS7A01G445700 chr7B 98.361 305 5 0 1 305 15796000 15796304 2.330000e-148 536.0
7 TraesCS7A01G445700 chr7B 95.502 289 9 3 4832 5117 600993148 600993435 5.190000e-125 459.0
8 TraesCS7A01G445700 chr7B 94.052 269 10 3 4517 4782 600992874 600993139 2.470000e-108 403.0
9 TraesCS7A01G445700 chr7B 98.182 55 1 0 5633 5687 601118787 601118841 4.690000e-16 97.1
10 TraesCS7A01G445700 chr7D 93.324 2142 109 18 2392 4519 553817330 553815209 0.000000e+00 3133.0
11 TraesCS7A01G445700 chr7D 87.675 2069 146 50 297 2285 553819387 553817348 0.000000e+00 2307.0
12 TraesCS7A01G445700 chr7D 88.380 611 43 15 4517 5121 553815166 553814578 0.000000e+00 710.0
13 TraesCS7A01G445700 chr7D 80.255 157 6 12 5530 5686 553814424 553814293 1.690000e-15 95.3
14 TraesCS7A01G445700 chr7D 98.148 54 1 0 5633 5686 555189160 555189107 1.690000e-15 95.3
15 TraesCS7A01G445700 chr7D 96.364 55 2 0 5633 5687 555192485 555192431 2.180000e-14 91.6
16 TraesCS7A01G445700 chr2B 99.340 303 2 0 1 303 762806472 762806170 3.000000e-152 549.0
17 TraesCS7A01G445700 chr2B 99.010 303 3 0 1 303 714030046 714030348 1.390000e-150 544.0
18 TraesCS7A01G445700 chr2B 82.236 653 66 26 881 1496 49266024 49265385 8.450000e-143 518.0
19 TraesCS7A01G445700 chr2B 88.350 103 9 3 3329 3429 600931745 600931846 2.780000e-23 121.0
20 TraesCS7A01G445700 chr1A 99.340 303 2 0 1 303 578030585 578030283 3.000000e-152 549.0
21 TraesCS7A01G445700 chr1A 95.053 283 12 2 5127 5407 547888783 547888501 1.450000e-120 444.0
22 TraesCS7A01G445700 chr1B 98.689 305 4 0 1 305 681101009 681100705 5.010000e-150 542.0
23 TraesCS7A01G445700 chr6A 98.680 303 4 0 1 303 218756977 218757279 6.480000e-149 538.0
24 TraesCS7A01G445700 chr6A 95.341 279 11 2 5127 5403 364945179 364945457 5.230000e-120 442.0
25 TraesCS7A01G445700 chr5B 98.680 303 4 0 1 303 609148651 609148349 6.480000e-149 538.0
26 TraesCS7A01G445700 chr4A 98.680 303 4 0 1 303 220053965 220054267 6.480000e-149 538.0
27 TraesCS7A01G445700 chr4A 95.357 280 9 4 5127 5403 119307280 119307558 5.230000e-120 442.0
28 TraesCS7A01G445700 chr3A 98.680 303 4 0 1 303 691645737 691646039 6.480000e-149 538.0
29 TraesCS7A01G445700 chr3A 95.714 280 9 3 5127 5403 564766544 564766265 1.120000e-121 448.0
30 TraesCS7A01G445700 chr3A 95.341 279 11 2 5127 5403 234941731 234942009 5.230000e-120 442.0
31 TraesCS7A01G445700 chr3A 94.406 286 13 3 5127 5410 316668327 316668043 2.430000e-118 436.0
32 TraesCS7A01G445700 chr2A 95.699 279 10 2 5127 5403 270701226 270701504 1.120000e-121 448.0
33 TraesCS7A01G445700 chr5A 95.341 279 11 2 5127 5403 13350457 13350179 5.230000e-120 442.0
34 TraesCS7A01G445700 chr6B 88.991 109 11 1 3321 3428 705233415 705233523 3.570000e-27 134.0
35 TraesCS7A01G445700 chr6B 88.073 109 12 1 3321 3428 705215918 705216026 1.660000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G445700 chr7A 640575923 640581609 5686 False 10503.000 10503 100.0000 1 5687 1 chr7A.!!$F2 5686
1 TraesCS7A01G445700 chr7B 600988395 600993435 5040 False 1608.000 3374 92.6640 297 5117 4 chr7B.!!$F3 4820
2 TraesCS7A01G445700 chr7D 553814293 553819387 5094 True 1561.325 3133 87.4085 297 5686 4 chr7D.!!$R1 5389
3 TraesCS7A01G445700 chr2B 49265385 49266024 639 True 518.000 518 82.2360 881 1496 1 chr2B.!!$R1 615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
180 181 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.0 17.81 0.00 0.00 4.35 F
1173 1276 0.037697 TTCGAGTCCAATCCGGTGTG 60.038 55.0 0.00 0.00 35.57 3.82 F
1360 1473 0.100503 AAAAATATCCTGTGCCGCGC 59.899 50.0 0.00 0.00 0.00 6.86 F
2144 2303 0.191064 AACTCTCTCAGTGGGACCCA 59.809 55.0 9.95 9.95 34.56 4.51 F
2857 3204 0.535335 TAAGCTGCCTCGTAGGGTTG 59.465 55.0 0.00 0.00 35.37 3.77 F
3501 3848 0.696501 ATGGCCTACCGAAACAAGGT 59.303 50.0 3.32 0.00 45.28 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1418 1532 0.380378 CAACACCACACCAAACGGAG 59.620 55.000 0.00 0.0 0.00 4.63 R
2841 3188 0.459759 GTACAACCCTACGAGGCAGC 60.460 60.000 0.00 0.0 32.73 5.25 R
3147 3494 1.926511 GCACTGCCGGTTCATCCTTG 61.927 60.000 1.90 0.0 0.00 3.61 R
3858 4205 0.383590 CATTTTGCACCGTGTGTCCA 59.616 50.000 0.00 0.0 35.75 4.02 R
4536 4940 1.143838 CGGGCTGACGGATTCATGA 59.856 57.895 0.00 0.0 32.17 3.07 R
5385 5795 0.472471 TGAGGCCTTCTTTGGTTCGT 59.528 50.000 6.77 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.669569 GGTTGAGCAGAGCCGCAA 60.670 61.111 0.00 0.00 0.00 4.85
18 19 2.684843 GGTTGAGCAGAGCCGCAAG 61.685 63.158 0.00 0.00 0.00 4.01
19 20 1.669115 GTTGAGCAGAGCCGCAAGA 60.669 57.895 0.00 0.00 43.02 3.02
20 21 1.375140 TTGAGCAGAGCCGCAAGAG 60.375 57.895 0.00 0.00 43.02 2.85
21 22 1.820010 TTGAGCAGAGCCGCAAGAGA 61.820 55.000 0.00 0.00 43.02 3.10
22 23 1.519013 GAGCAGAGCCGCAAGAGAG 60.519 63.158 0.00 0.00 43.02 3.20
23 24 2.511145 GCAGAGCCGCAAGAGAGG 60.511 66.667 0.00 0.00 43.02 3.69
30 31 4.521062 CGCAAGAGAGGCCGGGAG 62.521 72.222 2.18 0.00 43.02 4.30
54 55 4.988598 CGCAGCAGTGGAACCGGT 62.989 66.667 0.00 0.00 37.80 5.28
55 56 3.357079 GCAGCAGTGGAACCGGTG 61.357 66.667 8.52 0.00 37.80 4.94
56 57 2.669569 CAGCAGTGGAACCGGTGG 60.670 66.667 8.52 0.00 37.80 4.61
57 58 3.168528 AGCAGTGGAACCGGTGGT 61.169 61.111 8.52 0.00 37.80 4.16
58 59 2.978010 GCAGTGGAACCGGTGGTG 60.978 66.667 8.52 2.41 37.80 4.17
59 60 2.281484 CAGTGGAACCGGTGGTGG 60.281 66.667 8.52 0.00 37.80 4.61
60 61 4.265056 AGTGGAACCGGTGGTGGC 62.265 66.667 8.52 0.00 37.80 5.01
145 146 3.795342 CGGCGGTGCGGGTTTTAG 61.795 66.667 0.00 0.00 0.00 1.85
146 147 3.436924 GGCGGTGCGGGTTTTAGG 61.437 66.667 0.00 0.00 0.00 2.69
147 148 3.436924 GCGGTGCGGGTTTTAGGG 61.437 66.667 0.00 0.00 0.00 3.53
148 149 2.032987 CGGTGCGGGTTTTAGGGT 59.967 61.111 0.00 0.00 0.00 4.34
149 150 1.601477 CGGTGCGGGTTTTAGGGTT 60.601 57.895 0.00 0.00 0.00 4.11
150 151 1.174078 CGGTGCGGGTTTTAGGGTTT 61.174 55.000 0.00 0.00 0.00 3.27
151 152 1.881498 CGGTGCGGGTTTTAGGGTTTA 60.881 52.381 0.00 0.00 0.00 2.01
152 153 1.814394 GGTGCGGGTTTTAGGGTTTAG 59.186 52.381 0.00 0.00 0.00 1.85
153 154 2.552809 GGTGCGGGTTTTAGGGTTTAGA 60.553 50.000 0.00 0.00 0.00 2.10
154 155 3.148412 GTGCGGGTTTTAGGGTTTAGAA 58.852 45.455 0.00 0.00 0.00 2.10
155 156 3.189910 GTGCGGGTTTTAGGGTTTAGAAG 59.810 47.826 0.00 0.00 0.00 2.85
156 157 2.163010 GCGGGTTTTAGGGTTTAGAAGC 59.837 50.000 0.00 0.00 0.00 3.86
157 158 2.417586 CGGGTTTTAGGGTTTAGAAGCG 59.582 50.000 0.00 0.00 0.00 4.68
158 159 2.751259 GGGTTTTAGGGTTTAGAAGCGG 59.249 50.000 0.00 0.00 0.00 5.52
159 160 3.559811 GGGTTTTAGGGTTTAGAAGCGGA 60.560 47.826 0.00 0.00 0.00 5.54
160 161 4.074259 GGTTTTAGGGTTTAGAAGCGGAA 58.926 43.478 0.00 0.00 0.00 4.30
161 162 4.155462 GGTTTTAGGGTTTAGAAGCGGAAG 59.845 45.833 0.00 0.00 0.00 3.46
175 176 2.033793 CGGAAGCGATCGTAACCTAG 57.966 55.000 17.81 2.69 0.00 3.02
176 177 1.768510 GGAAGCGATCGTAACCTAGC 58.231 55.000 17.81 0.00 0.00 3.42
177 178 1.396644 GAAGCGATCGTAACCTAGCG 58.603 55.000 17.81 0.00 0.00 4.26
178 179 0.737219 AAGCGATCGTAACCTAGCGT 59.263 50.000 17.81 0.00 0.00 5.07
179 180 0.029035 AGCGATCGTAACCTAGCGTG 59.971 55.000 17.81 0.00 0.00 5.34
180 181 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.000 17.81 0.00 0.00 4.35
181 182 1.334779 GCGATCGTAACCTAGCGTGAT 60.335 52.381 17.81 0.00 0.00 3.06
182 183 2.096069 GCGATCGTAACCTAGCGTGATA 60.096 50.000 17.81 0.00 0.00 2.15
183 184 3.477122 CGATCGTAACCTAGCGTGATAC 58.523 50.000 7.03 0.00 0.00 2.24
184 185 3.666374 CGATCGTAACCTAGCGTGATACC 60.666 52.174 7.03 0.00 0.00 2.73
185 186 2.642427 TCGTAACCTAGCGTGATACCA 58.358 47.619 0.00 0.00 0.00 3.25
186 187 3.216800 TCGTAACCTAGCGTGATACCAT 58.783 45.455 0.00 0.00 0.00 3.55
187 188 3.004002 TCGTAACCTAGCGTGATACCATG 59.996 47.826 0.00 0.00 0.00 3.66
188 189 3.243301 CGTAACCTAGCGTGATACCATGT 60.243 47.826 0.00 0.00 0.00 3.21
189 190 4.023792 CGTAACCTAGCGTGATACCATGTA 60.024 45.833 0.00 0.00 0.00 2.29
190 191 5.506151 CGTAACCTAGCGTGATACCATGTAA 60.506 44.000 0.00 0.00 0.00 2.41
191 192 4.585955 ACCTAGCGTGATACCATGTAAG 57.414 45.455 0.00 0.00 0.00 2.34
192 193 4.212716 ACCTAGCGTGATACCATGTAAGA 58.787 43.478 0.00 0.00 0.00 2.10
193 194 4.037684 ACCTAGCGTGATACCATGTAAGAC 59.962 45.833 0.00 0.00 0.00 3.01
194 195 4.037565 CCTAGCGTGATACCATGTAAGACA 59.962 45.833 0.00 0.00 0.00 3.41
195 196 4.465632 AGCGTGATACCATGTAAGACAA 57.534 40.909 0.00 0.00 0.00 3.18
196 197 5.023533 AGCGTGATACCATGTAAGACAAT 57.976 39.130 0.00 0.00 0.00 2.71
197 198 6.156748 AGCGTGATACCATGTAAGACAATA 57.843 37.500 0.00 0.00 0.00 1.90
198 199 6.578944 AGCGTGATACCATGTAAGACAATAA 58.421 36.000 0.00 0.00 0.00 1.40
199 200 6.701841 AGCGTGATACCATGTAAGACAATAAG 59.298 38.462 0.00 0.00 0.00 1.73
200 201 6.479001 GCGTGATACCATGTAAGACAATAAGT 59.521 38.462 0.00 0.00 0.00 2.24
201 202 7.011109 GCGTGATACCATGTAAGACAATAAGTT 59.989 37.037 0.00 0.00 0.00 2.66
202 203 8.879759 CGTGATACCATGTAAGACAATAAGTTT 58.120 33.333 0.00 0.00 0.00 2.66
206 207 7.227049 ACCATGTAAGACAATAAGTTTTGGG 57.773 36.000 0.00 0.00 0.00 4.12
207 208 6.210584 ACCATGTAAGACAATAAGTTTTGGGG 59.789 38.462 0.00 0.00 0.00 4.96
208 209 6.435904 CCATGTAAGACAATAAGTTTTGGGGA 59.564 38.462 0.00 0.00 0.00 4.81
209 210 7.039363 CCATGTAAGACAATAAGTTTTGGGGAA 60.039 37.037 0.00 0.00 0.00 3.97
210 211 7.279750 TGTAAGACAATAAGTTTTGGGGAAC 57.720 36.000 0.00 0.00 0.00 3.62
223 224 3.056328 GGAACCAGCGCAACCCTC 61.056 66.667 11.47 0.00 0.00 4.30
224 225 2.032681 GAACCAGCGCAACCCTCT 59.967 61.111 11.47 0.00 0.00 3.69
225 226 1.295423 GAACCAGCGCAACCCTCTA 59.705 57.895 11.47 0.00 0.00 2.43
226 227 0.741221 GAACCAGCGCAACCCTCTAG 60.741 60.000 11.47 0.00 0.00 2.43
227 228 2.185310 AACCAGCGCAACCCTCTAGG 62.185 60.000 11.47 0.00 43.78 3.02
239 240 2.407340 CCTCTAGGGGTGGCTTATCT 57.593 55.000 0.00 0.00 0.00 1.98
240 241 2.252714 CCTCTAGGGGTGGCTTATCTC 58.747 57.143 0.00 0.00 0.00 2.75
241 242 2.426414 CCTCTAGGGGTGGCTTATCTCA 60.426 54.545 0.00 0.00 0.00 3.27
242 243 3.515562 CTCTAGGGGTGGCTTATCTCAT 58.484 50.000 0.00 0.00 0.00 2.90
243 244 3.906846 CTCTAGGGGTGGCTTATCTCATT 59.093 47.826 0.00 0.00 0.00 2.57
244 245 5.087323 CTCTAGGGGTGGCTTATCTCATTA 58.913 45.833 0.00 0.00 0.00 1.90
245 246 5.665701 TCTAGGGGTGGCTTATCTCATTAT 58.334 41.667 0.00 0.00 0.00 1.28
246 247 6.811574 TCTAGGGGTGGCTTATCTCATTATA 58.188 40.000 0.00 0.00 0.00 0.98
247 248 7.430844 TCTAGGGGTGGCTTATCTCATTATAT 58.569 38.462 0.00 0.00 0.00 0.86
248 249 8.574853 TCTAGGGGTGGCTTATCTCATTATATA 58.425 37.037 0.00 0.00 0.00 0.86
249 250 9.386122 CTAGGGGTGGCTTATCTCATTATATAT 57.614 37.037 0.00 0.00 0.00 0.86
251 252 9.744125 AGGGGTGGCTTATCTCATTATATATAA 57.256 33.333 7.62 7.62 0.00 0.98
273 274 8.774890 ATAATGGTTGTGTTACAATACGTACA 57.225 30.769 0.00 0.00 40.59 2.90
274 275 7.675962 AATGGTTGTGTTACAATACGTACAT 57.324 32.000 0.00 0.00 40.59 2.29
275 276 8.774890 AATGGTTGTGTTACAATACGTACATA 57.225 30.769 0.00 0.00 40.59 2.29
276 277 8.774890 ATGGTTGTGTTACAATACGTACATAA 57.225 30.769 0.00 0.00 40.59 1.90
277 278 8.242085 TGGTTGTGTTACAATACGTACATAAG 57.758 34.615 0.00 0.00 40.59 1.73
278 279 7.871973 TGGTTGTGTTACAATACGTACATAAGT 59.128 33.333 0.00 0.00 40.59 2.24
279 280 9.352784 GGTTGTGTTACAATACGTACATAAGTA 57.647 33.333 0.00 0.00 40.59 2.24
281 282 9.905171 TTGTGTTACAATACGTACATAAGTACA 57.095 29.630 8.82 3.51 40.77 2.90
302 303 9.848710 AGTACAGAAGCTATACATAGTCTAACA 57.151 33.333 0.00 0.00 32.96 2.41
333 335 9.000018 CGCAGAAAGAACAAGCTAAATTAATAC 58.000 33.333 0.00 0.00 0.00 1.89
420 427 8.072567 ACATATTTCTTCGCTATGCTTGAATTC 58.927 33.333 0.00 0.00 0.00 2.17
421 428 4.882671 TTCTTCGCTATGCTTGAATTCC 57.117 40.909 2.27 0.00 0.00 3.01
482 491 8.511604 AGTGACATTTGATATAGGGAACAAAG 57.488 34.615 0.00 0.00 36.07 2.77
483 492 8.328758 AGTGACATTTGATATAGGGAACAAAGA 58.671 33.333 0.00 0.00 36.07 2.52
484 493 9.125026 GTGACATTTGATATAGGGAACAAAGAT 57.875 33.333 0.00 0.00 36.07 2.40
485 494 9.342308 TGACATTTGATATAGGGAACAAAGATC 57.658 33.333 0.00 0.00 36.07 2.75
487 496 9.699410 ACATTTGATATAGGGAACAAAGATCAA 57.301 29.630 0.00 0.00 35.64 2.57
489 498 9.927081 ATTTGATATAGGGAACAAAGATCAACT 57.073 29.630 0.00 0.00 36.53 3.16
492 501 9.213777 TGATATAGGGAACAAAGATCAACTAGT 57.786 33.333 0.00 0.00 0.00 2.57
511 520 0.179094 TAATACTCTGCAACGGGCCG 60.179 55.000 27.06 27.06 43.89 6.13
517 526 2.823593 TGCAACGGGCCGATGATG 60.824 61.111 36.01 25.40 43.89 3.07
553 562 4.681074 TCCCAAATTTCAAAACCCAGTC 57.319 40.909 0.00 0.00 0.00 3.51
558 567 5.879777 CCAAATTTCAAAACCCAGTCTGTTT 59.120 36.000 0.00 0.00 37.52 2.83
559 568 6.037062 CCAAATTTCAAAACCCAGTCTGTTTC 59.963 38.462 0.00 0.00 34.97 2.78
589 598 1.301009 GGGAGCGAGCTTTATCCCG 60.301 63.158 13.48 0.97 41.98 5.14
590 599 1.956678 GGAGCGAGCTTTATCCCGC 60.957 63.158 7.10 7.10 47.00 6.13
618 628 4.933064 CGATCCTCCGCCTCGCAC 62.933 72.222 0.00 0.00 0.00 5.34
637 647 4.235762 CGATCCCCGCCGTCCATT 62.236 66.667 0.00 0.00 0.00 3.16
754 771 2.322830 GCACCGAGTTTCCGTTCCC 61.323 63.158 0.00 0.00 0.00 3.97
756 773 0.250166 CACCGAGTTTCCGTTCCCTT 60.250 55.000 0.00 0.00 0.00 3.95
813 837 2.531942 ACCTCCACCTCCCCCAAC 60.532 66.667 0.00 0.00 0.00 3.77
815 839 3.717294 CTCCACCTCCCCCAACCG 61.717 72.222 0.00 0.00 0.00 4.44
847 873 2.713770 CTCGCGCGGTAGCTTCTA 59.286 61.111 31.69 5.83 42.32 2.10
967 1028 2.042025 AGGGAGCAGAGGAGGAGC 60.042 66.667 0.00 0.00 0.00 4.70
968 1029 3.535962 GGGAGCAGAGGAGGAGCG 61.536 72.222 0.00 0.00 0.00 5.03
1063 1164 1.880340 GGGACGAGATTCGCTGCTG 60.880 63.158 0.00 0.00 45.12 4.41
1141 1244 3.258228 TTGCTGCTCAGATGGGCGT 62.258 57.895 0.00 0.00 0.00 5.68
1151 1254 0.899720 AGATGGGCGTTTCCTTCGTA 59.100 50.000 0.00 0.00 36.45 3.43
1162 1265 4.201561 CGTTTCCTTCGTATTTTCGAGTCC 60.202 45.833 0.00 0.00 40.86 3.85
1173 1276 0.037697 TTCGAGTCCAATCCGGTGTG 60.038 55.000 0.00 0.00 35.57 3.82
1265 1378 0.662374 TTCGTGCTTCCGAACTCGTC 60.662 55.000 0.00 0.00 41.54 4.20
1360 1473 0.100503 AAAAATATCCTGTGCCGCGC 59.899 50.000 0.00 0.00 0.00 6.86
1384 1498 4.625324 CGAATTTGGGTTCCATCTCCAGTA 60.625 45.833 0.00 0.00 31.53 2.74
1394 1508 2.158900 CCATCTCCAGTAGCATTTCCGT 60.159 50.000 0.00 0.00 0.00 4.69
1435 1567 1.822186 GCTCCGTTTGGTGTGGTGT 60.822 57.895 0.00 0.00 36.30 4.16
1442 1574 2.619177 CGTTTGGTGTGGTGTTGGATTA 59.381 45.455 0.00 0.00 0.00 1.75
1450 1582 3.007398 TGTGGTGTTGGATTAATTTGGCC 59.993 43.478 0.00 0.00 0.00 5.36
1457 1589 4.799564 TGGATTAATTTGGCCAACTGAC 57.200 40.909 20.35 7.79 0.00 3.51
1462 1594 1.708341 ATTTGGCCAACTGACTGCTT 58.292 45.000 20.35 0.00 0.00 3.91
1554 1686 1.895707 GAAGCAGGCCATGATCGGG 60.896 63.158 5.01 0.00 0.00 5.14
1586 1718 3.518998 CGTCGCCGACCTCCTCAT 61.519 66.667 12.26 0.00 35.63 2.90
1695 1828 2.380084 TGCTCAGGATTGGTACGAAC 57.620 50.000 0.00 0.00 0.00 3.95
1696 1829 1.899814 TGCTCAGGATTGGTACGAACT 59.100 47.619 0.00 0.00 0.00 3.01
1697 1830 3.093814 TGCTCAGGATTGGTACGAACTA 58.906 45.455 0.00 0.00 0.00 2.24
1698 1831 3.119245 TGCTCAGGATTGGTACGAACTAC 60.119 47.826 0.00 0.00 0.00 2.73
1700 1833 3.346315 TCAGGATTGGTACGAACTACGA 58.654 45.455 0.00 0.00 45.77 3.43
1701 1834 3.758023 TCAGGATTGGTACGAACTACGAA 59.242 43.478 0.00 0.00 45.77 3.85
1702 1835 4.400251 TCAGGATTGGTACGAACTACGAAT 59.600 41.667 0.00 0.00 45.77 3.34
1703 1836 4.503007 CAGGATTGGTACGAACTACGAATG 59.497 45.833 0.00 0.00 45.77 2.67
1704 1837 3.244579 GGATTGGTACGAACTACGAATGC 59.755 47.826 0.00 0.00 45.77 3.56
1705 1838 3.581024 TTGGTACGAACTACGAATGCT 57.419 42.857 0.00 0.00 45.77 3.79
1706 1839 3.581024 TGGTACGAACTACGAATGCTT 57.419 42.857 0.00 0.00 45.77 3.91
1713 1846 3.060895 CGAACTACGAATGCTTCTGGTTC 59.939 47.826 0.00 0.00 45.77 3.62
1715 1848 3.589988 ACTACGAATGCTTCTGGTTCAG 58.410 45.455 0.00 0.00 0.00 3.02
1791 1926 4.278170 TGGCAAAAGTTCTACTGATTGGTG 59.722 41.667 0.00 0.00 30.81 4.17
1807 1942 4.336889 TTGGTGGTCAAGTTCTAGTCAG 57.663 45.455 0.00 0.00 0.00 3.51
1810 1945 4.163458 TGGTGGTCAAGTTCTAGTCAGTTT 59.837 41.667 0.00 0.00 0.00 2.66
1845 2002 5.936187 ATCTGAGACTGTGATGACTGAAT 57.064 39.130 0.00 0.00 0.00 2.57
1846 2003 5.069501 TCTGAGACTGTGATGACTGAATG 57.930 43.478 0.00 0.00 0.00 2.67
1919 2076 1.438651 TGAACCATGCTTCGTGCTAC 58.561 50.000 5.00 0.00 43.37 3.58
1936 2093 3.679502 TGCTACGACATGATTGAACAGTG 59.320 43.478 0.00 0.00 0.00 3.66
1988 2145 4.901849 AGCCTGCAGAAACAGAGGTATATA 59.098 41.667 17.39 0.00 40.25 0.86
2019 2176 3.409026 ACTCAACTCTGCACCCTTAAG 57.591 47.619 0.00 0.00 0.00 1.85
2097 2256 4.036567 ACGGGAAGCAAAGTTTGTTAAC 57.963 40.909 16.70 8.75 34.36 2.01
2133 2292 4.207891 TGCATCCCAACTAAACTCTCTC 57.792 45.455 0.00 0.00 0.00 3.20
2144 2303 0.191064 AACTCTCTCAGTGGGACCCA 59.809 55.000 9.95 9.95 34.56 4.51
2180 2340 9.621629 TTTTATTAAGGAATCGATTTAGCAGGA 57.378 29.630 12.81 0.00 0.00 3.86
2200 2360 3.510360 GGACTGTAGCATCCACGGTATAT 59.490 47.826 0.00 0.00 35.64 0.86
2230 2390 6.433847 TCTGATGGTCTAGTTTTTCTTGGA 57.566 37.500 0.00 0.00 0.00 3.53
2250 2410 9.706691 TCTTGGATAATAATGGAAGATTACGTC 57.293 33.333 0.00 0.00 0.00 4.34
2251 2411 9.712305 CTTGGATAATAATGGAAGATTACGTCT 57.288 33.333 0.00 0.00 39.43 4.18
2252 2412 9.706691 TTGGATAATAATGGAAGATTACGTCTC 57.293 33.333 0.00 0.00 35.67 3.36
2256 2416 4.471904 AATGGAAGATTACGTCTCAGCA 57.528 40.909 0.00 0.00 35.67 4.41
2271 2431 2.609916 CTCAGCATCTGCATCAAGTGAG 59.390 50.000 4.79 4.00 45.16 3.51
2304 2464 7.349412 CCAGCTTATGGTCTAGTTTAGTAGT 57.651 40.000 0.00 0.00 44.91 2.73
2306 2466 7.427214 CAGCTTATGGTCTAGTTTAGTAGTCC 58.573 42.308 0.00 2.18 0.00 3.85
2317 2495 5.855045 AGTTTAGTAGTCCACCTTCAGTTG 58.145 41.667 0.00 0.00 0.00 3.16
2381 2560 4.864704 TCAAGAAAGGCCAATTAACCAC 57.135 40.909 5.01 0.00 0.00 4.16
2384 2563 5.475564 TCAAGAAAGGCCAATTAACCACTAC 59.524 40.000 5.01 0.00 0.00 2.73
2529 2874 9.032420 GGTCTATAGTTTAGTGTTATCACAAGC 57.968 37.037 6.70 2.08 46.01 4.01
2562 2908 4.201990 GCTGGGAGCTTCAGTTAATGAATG 60.202 45.833 16.11 0.00 46.71 2.67
2568 2914 6.374333 GGAGCTTCAGTTAATGAATGTAACCA 59.626 38.462 0.00 0.00 46.71 3.67
2569 2915 7.145932 AGCTTCAGTTAATGAATGTAACCAC 57.854 36.000 0.00 0.00 46.71 4.16
2576 2922 7.962918 CAGTTAATGAATGTAACCACTAACAGC 59.037 37.037 0.00 0.00 32.83 4.40
2644 2990 4.093514 GCAATTCATCATGACACTCGTTG 58.906 43.478 0.00 0.49 0.00 4.10
2841 3188 9.950680 ATGCTCCAATAATTTATTGTCGTTAAG 57.049 29.630 21.74 12.65 43.05 1.85
2846 3193 7.167468 CCAATAATTTATTGTCGTTAAGCTGCC 59.833 37.037 21.74 0.00 43.05 4.85
2849 3196 1.359848 ATTGTCGTTAAGCTGCCTCG 58.640 50.000 0.00 0.00 0.00 4.63
2857 3204 0.535335 TAAGCTGCCTCGTAGGGTTG 59.465 55.000 0.00 0.00 35.37 3.77
2898 3245 3.423539 TCTTGTGCCTGCAGTTTATCT 57.576 42.857 13.81 0.00 0.00 1.98
2918 3265 6.814506 ATCTGGAAACTTGAGTCTGAATTG 57.185 37.500 0.00 0.00 0.00 2.32
2927 3274 8.911247 AACTTGAGTCTGAATTGTTTACAAAC 57.089 30.769 0.00 0.00 39.55 2.93
2949 3296 6.313744 ACGAGGAAAAGTTTCAAGTAATGG 57.686 37.500 6.15 0.00 38.92 3.16
3029 3376 2.125753 GCTGCACGGGAGTCTGAG 60.126 66.667 0.00 0.00 44.67 3.35
3129 3476 8.884124 TGGATTTTGTATTTCAGGATCTTCTT 57.116 30.769 0.00 0.00 0.00 2.52
3147 3494 9.351570 GATCTTCTTGAAAAGGATTCAATGAAC 57.648 33.333 0.00 0.00 46.24 3.18
3501 3848 0.696501 ATGGCCTACCGAAACAAGGT 59.303 50.000 3.32 0.00 45.28 3.50
3509 3856 2.730382 ACCGAAACAAGGTTCTGGTTT 58.270 42.857 8.04 0.49 39.96 3.27
3584 3931 6.701340 AGCCAAAAGAAACAAAGAAAGAACT 58.299 32.000 0.00 0.00 0.00 3.01
3725 4072 5.186797 AGAATCAAGGACCTACTTCACTGAG 59.813 44.000 0.00 0.00 0.00 3.35
3730 4077 3.965694 GGACCTACTTCACTGAGTCCTA 58.034 50.000 7.02 0.00 40.51 2.94
3757 4104 3.117436 TGGTAAAACTACAAACAGGCCCT 60.117 43.478 0.00 0.00 0.00 5.19
3858 4205 4.137543 GACCACAACACTTGGAAGATCTT 58.862 43.478 7.95 7.95 37.58 2.40
4008 4355 4.937620 TGCAATATGAGTGAAAGGACAGAC 59.062 41.667 0.00 0.00 0.00 3.51
4404 4760 1.267574 ATGTGCACGGTGGAGATCCT 61.268 55.000 13.13 0.00 36.82 3.24
4435 4791 3.522750 AGAGAGGATGATGGACAAGCTTT 59.477 43.478 0.00 0.00 0.00 3.51
4536 4940 1.099689 GAAGAGCAGTCTCGCTACCT 58.900 55.000 0.00 0.00 44.01 3.08
4546 4950 1.609072 TCTCGCTACCTCATGAATCCG 59.391 52.381 0.00 0.00 0.00 4.18
4715 5119 9.205513 AGGAGGCACAAAGATTGAATATATTTT 57.794 29.630 0.00 0.00 0.00 1.82
4759 5163 4.526970 TGGAGCTTTCTGACAGTTTCTTT 58.473 39.130 1.59 0.00 0.00 2.52
4804 5208 6.179040 CCCTTTCTGAATTCTGAGACTGAAT 58.821 40.000 13.85 0.00 34.38 2.57
4805 5209 6.093771 CCCTTTCTGAATTCTGAGACTGAATG 59.906 42.308 13.85 4.34 33.51 2.67
4810 5214 6.058553 TGAATTCTGAGACTGAATGGATGT 57.941 37.500 7.05 0.00 33.51 3.06
4830 5234 2.627863 TATGTGCATGTGTTTTCGCC 57.372 45.000 0.00 0.00 0.00 5.54
4932 5337 2.620627 GGGAATTGGTACAGGGGTCAAG 60.621 54.545 0.00 0.00 42.39 3.02
5112 5522 8.985315 ATTTTGATTATGAAGCCACAGAGATA 57.015 30.769 0.00 0.00 0.00 1.98
5118 5528 9.282569 GATTATGAAGCCACAGAGATATTCTTT 57.717 33.333 0.00 0.00 32.41 2.52
5122 5532 8.862325 TGAAGCCACAGAGATATTCTTTTTAA 57.138 30.769 0.00 0.00 32.41 1.52
5123 5533 9.295825 TGAAGCCACAGAGATATTCTTTTTAAA 57.704 29.630 0.00 0.00 32.41 1.52
5126 5536 9.466497 AGCCACAGAGATATTCTTTTTAAATGA 57.534 29.630 0.00 0.00 32.41 2.57
5127 5537 9.727627 GCCACAGAGATATTCTTTTTAAATGAG 57.272 33.333 0.00 0.00 32.41 2.90
5149 5559 9.853177 ATGAGGTTTTTGTAGGAATTCTATAGG 57.147 33.333 5.23 0.00 0.00 2.57
5150 5560 9.053472 TGAGGTTTTTGTAGGAATTCTATAGGA 57.947 33.333 5.23 0.00 0.00 2.94
5160 5570 9.825109 GTAGGAATTCTATAGGATAGGATTTGC 57.175 37.037 5.23 0.00 0.00 3.68
5161 5571 8.454859 AGGAATTCTATAGGATAGGATTTGCA 57.545 34.615 5.23 0.00 0.00 4.08
5162 5572 8.894592 AGGAATTCTATAGGATAGGATTTGCAA 58.105 33.333 5.23 0.00 0.00 4.08
5163 5573 9.520515 GGAATTCTATAGGATAGGATTTGCAAA 57.479 33.333 15.44 15.44 0.00 3.68
5165 5575 9.525826 AATTCTATAGGATAGGATTTGCAAAGG 57.474 33.333 18.19 0.00 0.00 3.11
5166 5576 7.872061 TCTATAGGATAGGATTTGCAAAGGA 57.128 36.000 18.19 2.96 0.00 3.36
5167 5577 8.275187 TCTATAGGATAGGATTTGCAAAGGAA 57.725 34.615 18.19 3.55 0.00 3.36
5168 5578 8.723365 TCTATAGGATAGGATTTGCAAAGGAAA 58.277 33.333 18.19 3.91 0.00 3.13
5169 5579 9.354673 CTATAGGATAGGATTTGCAAAGGAAAA 57.645 33.333 18.19 2.48 0.00 2.29
5170 5580 6.933514 AGGATAGGATTTGCAAAGGAAAAA 57.066 33.333 18.19 1.42 0.00 1.94
5171 5581 7.500629 AGGATAGGATTTGCAAAGGAAAAAT 57.499 32.000 18.19 6.18 0.00 1.82
5172 5582 7.921304 AGGATAGGATTTGCAAAGGAAAAATT 58.079 30.769 18.19 0.00 0.00 1.82
5173 5583 8.043113 AGGATAGGATTTGCAAAGGAAAAATTC 58.957 33.333 18.19 7.27 0.00 2.17
5174 5584 8.043113 GGATAGGATTTGCAAAGGAAAAATTCT 58.957 33.333 18.19 5.44 34.31 2.40
5175 5585 9.440773 GATAGGATTTGCAAAGGAAAAATTCTT 57.559 29.630 18.19 6.53 32.57 2.52
5176 5586 9.797642 ATAGGATTTGCAAAGGAAAAATTCTTT 57.202 25.926 18.19 0.00 32.57 2.52
5184 5594 5.894298 AAGGAAAAATTCTTTGAAGCCCT 57.106 34.783 0.00 0.00 0.00 5.19
5185 5595 5.894298 AGGAAAAATTCTTTGAAGCCCTT 57.106 34.783 0.00 0.00 0.00 3.95
5186 5596 6.252599 AGGAAAAATTCTTTGAAGCCCTTT 57.747 33.333 0.00 0.00 0.00 3.11
5187 5597 6.057533 AGGAAAAATTCTTTGAAGCCCTTTG 58.942 36.000 0.00 0.00 0.00 2.77
5188 5598 5.239306 GGAAAAATTCTTTGAAGCCCTTTGG 59.761 40.000 0.00 0.00 0.00 3.28
5189 5599 5.372343 AAAATTCTTTGAAGCCCTTTGGT 57.628 34.783 0.00 0.00 0.00 3.67
5190 5600 5.372343 AAATTCTTTGAAGCCCTTTGGTT 57.628 34.783 0.00 0.00 37.39 3.67
5191 5601 5.372343 AATTCTTTGAAGCCCTTTGGTTT 57.628 34.783 0.00 0.00 37.85 3.27
5192 5602 3.817709 TCTTTGAAGCCCTTTGGTTTG 57.182 42.857 0.00 0.00 34.87 2.93
5193 5603 3.103742 TCTTTGAAGCCCTTTGGTTTGT 58.896 40.909 0.00 0.00 34.87 2.83
5194 5604 4.282496 TCTTTGAAGCCCTTTGGTTTGTA 58.718 39.130 0.00 0.00 34.87 2.41
5195 5605 4.340950 TCTTTGAAGCCCTTTGGTTTGTAG 59.659 41.667 0.00 0.00 34.87 2.74
5196 5606 2.593026 TGAAGCCCTTTGGTTTGTAGG 58.407 47.619 0.00 0.00 34.87 3.18
5197 5607 2.175931 TGAAGCCCTTTGGTTTGTAGGA 59.824 45.455 0.00 0.00 34.87 2.94
5198 5608 3.227614 GAAGCCCTTTGGTTTGTAGGAA 58.772 45.455 0.00 0.00 34.87 3.36
5199 5609 3.542969 AGCCCTTTGGTTTGTAGGAAT 57.457 42.857 0.00 0.00 0.00 3.01
5200 5610 3.165071 AGCCCTTTGGTTTGTAGGAATG 58.835 45.455 0.00 0.00 0.00 2.67
5201 5611 2.233676 GCCCTTTGGTTTGTAGGAATGG 59.766 50.000 0.00 0.00 0.00 3.16
5202 5612 3.773560 CCCTTTGGTTTGTAGGAATGGA 58.226 45.455 0.00 0.00 0.00 3.41
5203 5613 4.352893 CCCTTTGGTTTGTAGGAATGGAT 58.647 43.478 0.00 0.00 0.00 3.41
5204 5614 4.777366 CCCTTTGGTTTGTAGGAATGGATT 59.223 41.667 0.00 0.00 0.00 3.01
5205 5615 5.105351 CCCTTTGGTTTGTAGGAATGGATTC 60.105 44.000 0.00 0.00 36.08 2.52
5221 5631 7.574021 AATGGATTCCTATTCCTATGTAGCA 57.426 36.000 3.95 0.00 34.17 3.49
5222 5632 7.761981 ATGGATTCCTATTCCTATGTAGCAT 57.238 36.000 3.95 0.00 34.17 3.79
5223 5633 8.860517 ATGGATTCCTATTCCTATGTAGCATA 57.139 34.615 3.95 0.00 34.17 3.14
5224 5634 8.311395 TGGATTCCTATTCCTATGTAGCATAG 57.689 38.462 3.95 8.69 34.17 2.23
5225 5635 7.345653 TGGATTCCTATTCCTATGTAGCATAGG 59.654 40.741 22.61 22.61 41.90 2.57
5226 5636 7.565398 GGATTCCTATTCCTATGTAGCATAGGA 59.435 40.741 25.58 25.58 46.07 2.94
5234 5644 7.187824 TCCTATGTAGCATAGGAATCAATCC 57.812 40.000 26.59 0.00 45.11 3.01
5247 5657 6.284891 GGAATCAATCCTTCATGTTTTGGA 57.715 37.500 0.00 0.00 45.56 3.53
5248 5658 6.335777 GGAATCAATCCTTCATGTTTTGGAG 58.664 40.000 0.00 0.00 45.56 3.86
5278 5688 8.635765 AAAAACATTAGCCTAGACTCAATGAA 57.364 30.769 12.01 0.00 32.29 2.57
5279 5689 8.635765 AAAACATTAGCCTAGACTCAATGAAA 57.364 30.769 12.01 0.00 32.29 2.69
5280 5690 8.635765 AAACATTAGCCTAGACTCAATGAAAA 57.364 30.769 12.01 0.00 32.29 2.29
5281 5691 8.635765 AACATTAGCCTAGACTCAATGAAAAA 57.364 30.769 12.01 0.00 32.29 1.94
5310 5720 9.552695 TCCTATCCTATACATCAAATGACATCT 57.447 33.333 0.00 0.00 0.00 2.90
5311 5721 9.814899 CCTATCCTATACATCAAATGACATCTC 57.185 37.037 0.00 0.00 0.00 2.75
5315 5725 9.770097 TCCTATACATCAAATGACATCTCTTTC 57.230 33.333 0.00 0.00 0.00 2.62
5316 5726 9.775854 CCTATACATCAAATGACATCTCTTTCT 57.224 33.333 0.00 0.00 0.00 2.52
5334 5744 9.113838 TCTCTTTCTTTATAGGAATTGACATGC 57.886 33.333 0.00 0.00 0.00 4.06
5335 5745 8.806429 TCTTTCTTTATAGGAATTGACATGCA 57.194 30.769 0.00 0.00 0.00 3.96
5336 5746 9.412460 TCTTTCTTTATAGGAATTGACATGCAT 57.588 29.630 0.00 0.00 0.00 3.96
5337 5747 9.459640 CTTTCTTTATAGGAATTGACATGCATG 57.540 33.333 25.09 25.09 0.00 4.06
5338 5748 8.523915 TTCTTTATAGGAATTGACATGCATGT 57.476 30.769 31.82 31.82 45.16 3.21
5339 5749 8.523915 TCTTTATAGGAATTGACATGCATGTT 57.476 30.769 31.82 17.28 41.95 2.71
5340 5750 9.625747 TCTTTATAGGAATTGACATGCATGTTA 57.374 29.630 31.82 25.68 41.95 2.41
5343 5753 9.797642 TTATAGGAATTGACATGCATGTTATCT 57.202 29.630 31.82 22.59 41.95 1.98
5344 5754 6.630444 AGGAATTGACATGCATGTTATCTC 57.370 37.500 31.82 23.60 41.95 2.75
5345 5755 6.124340 AGGAATTGACATGCATGTTATCTCA 58.876 36.000 31.82 21.61 41.95 3.27
5346 5756 6.039047 AGGAATTGACATGCATGTTATCTCAC 59.961 38.462 31.82 17.95 41.95 3.51
5347 5757 6.039047 GGAATTGACATGCATGTTATCTCACT 59.961 38.462 31.82 16.36 41.95 3.41
5348 5758 7.400599 AATTGACATGCATGTTATCTCACTT 57.599 32.000 31.82 20.60 41.95 3.16
5349 5759 6.426980 TTGACATGCATGTTATCTCACTTC 57.573 37.500 31.82 15.88 41.95 3.01
5350 5760 4.877823 TGACATGCATGTTATCTCACTTCC 59.122 41.667 31.82 15.40 41.95 3.46
5351 5761 5.108187 ACATGCATGTTATCTCACTTCCT 57.892 39.130 26.61 0.00 37.90 3.36
5352 5762 6.127083 TGACATGCATGTTATCTCACTTCCTA 60.127 38.462 31.82 4.71 41.95 2.94
5353 5763 6.835174 ACATGCATGTTATCTCACTTCCTAT 58.165 36.000 26.61 0.00 37.90 2.57
5354 5764 6.709397 ACATGCATGTTATCTCACTTCCTATG 59.291 38.462 26.61 0.00 37.90 2.23
5355 5765 6.484364 TGCATGTTATCTCACTTCCTATGA 57.516 37.500 0.00 0.00 0.00 2.15
5356 5766 7.071069 TGCATGTTATCTCACTTCCTATGAT 57.929 36.000 0.00 0.00 0.00 2.45
5357 5767 7.512130 TGCATGTTATCTCACTTCCTATGATT 58.488 34.615 0.00 0.00 0.00 2.57
5358 5768 7.443272 TGCATGTTATCTCACTTCCTATGATTG 59.557 37.037 0.00 0.00 0.00 2.67
5359 5769 7.443575 GCATGTTATCTCACTTCCTATGATTGT 59.556 37.037 0.00 0.00 0.00 2.71
5360 5770 9.334947 CATGTTATCTCACTTCCTATGATTGTT 57.665 33.333 0.00 0.00 0.00 2.83
5361 5771 8.948631 TGTTATCTCACTTCCTATGATTGTTC 57.051 34.615 0.00 0.00 0.00 3.18
5362 5772 8.762645 TGTTATCTCACTTCCTATGATTGTTCT 58.237 33.333 0.00 0.00 0.00 3.01
5366 5776 9.995003 ATCTCACTTCCTATGATTGTTCTATTC 57.005 33.333 0.00 0.00 0.00 1.75
5367 5777 8.424918 TCTCACTTCCTATGATTGTTCTATTCC 58.575 37.037 0.00 0.00 0.00 3.01
5368 5778 8.324191 TCACTTCCTATGATTGTTCTATTCCT 57.676 34.615 0.00 0.00 0.00 3.36
5369 5779 9.434275 TCACTTCCTATGATTGTTCTATTCCTA 57.566 33.333 0.00 0.00 0.00 2.94
5391 5801 8.810041 TCCTATAAAATTCCTATCCTACGAACC 58.190 37.037 0.00 0.00 0.00 3.62
5392 5802 8.591072 CCTATAAAATTCCTATCCTACGAACCA 58.409 37.037 0.00 0.00 0.00 3.67
5393 5803 9.991906 CTATAAAATTCCTATCCTACGAACCAA 57.008 33.333 0.00 0.00 0.00 3.67
5395 5805 7.625828 AAAATTCCTATCCTACGAACCAAAG 57.374 36.000 0.00 0.00 0.00 2.77
5396 5806 6.555463 AATTCCTATCCTACGAACCAAAGA 57.445 37.500 0.00 0.00 0.00 2.52
5397 5807 6.555463 ATTCCTATCCTACGAACCAAAGAA 57.445 37.500 0.00 0.00 0.00 2.52
5398 5808 5.593679 TCCTATCCTACGAACCAAAGAAG 57.406 43.478 0.00 0.00 0.00 2.85
5399 5809 4.404715 TCCTATCCTACGAACCAAAGAAGG 59.595 45.833 0.00 0.00 0.00 3.46
5400 5810 2.467566 TCCTACGAACCAAAGAAGGC 57.532 50.000 0.00 0.00 0.00 4.35
5401 5811 1.002773 TCCTACGAACCAAAGAAGGCC 59.997 52.381 0.00 0.00 0.00 5.19
5402 5812 1.003233 CCTACGAACCAAAGAAGGCCT 59.997 52.381 0.00 0.00 0.00 5.19
5403 5813 2.347731 CTACGAACCAAAGAAGGCCTC 58.652 52.381 5.23 0.00 0.00 4.70
5407 5817 2.155279 GAACCAAAGAAGGCCTCAGTC 58.845 52.381 5.23 0.00 0.00 3.51
5417 5827 1.415659 AGGCCTCAGTCTGTATCATGC 59.584 52.381 0.00 0.00 0.00 4.06
5421 5831 3.944015 GCCTCAGTCTGTATCATGCTTTT 59.056 43.478 0.00 0.00 0.00 2.27
5422 5832 4.397417 GCCTCAGTCTGTATCATGCTTTTT 59.603 41.667 0.00 0.00 0.00 1.94
5425 5835 7.362056 GCCTCAGTCTGTATCATGCTTTTTAAA 60.362 37.037 0.00 0.00 0.00 1.52
5427 5837 9.499585 CTCAGTCTGTATCATGCTTTTTAAATG 57.500 33.333 0.00 0.00 0.00 2.32
5428 5838 7.970061 TCAGTCTGTATCATGCTTTTTAAATGC 59.030 33.333 8.37 8.37 0.00 3.56
5429 5839 7.221452 CAGTCTGTATCATGCTTTTTAAATGCC 59.779 37.037 12.01 0.00 0.00 4.40
5437 5847 4.431809 TGCTTTTTAAATGCCGATCATGG 58.568 39.130 12.01 0.00 35.13 3.66
5455 5865 3.762407 TGGGAACAGAACATTCTCGAA 57.238 42.857 0.00 0.00 34.74 3.71
5456 5866 4.079980 TGGGAACAGAACATTCTCGAAA 57.920 40.909 0.00 0.00 34.74 3.46
5457 5867 4.651778 TGGGAACAGAACATTCTCGAAAT 58.348 39.130 0.00 0.00 34.74 2.17
5458 5868 5.070001 TGGGAACAGAACATTCTCGAAATT 58.930 37.500 0.00 0.00 34.74 1.82
5459 5869 5.181245 TGGGAACAGAACATTCTCGAAATTC 59.819 40.000 0.00 0.00 34.74 2.17
5460 5870 5.392057 GGGAACAGAACATTCTCGAAATTCC 60.392 44.000 0.00 0.00 34.74 3.01
5462 5872 4.566004 ACAGAACATTCTCGAAATTCCGA 58.434 39.130 0.00 0.00 34.74 4.55
5463 5873 4.994852 ACAGAACATTCTCGAAATTCCGAA 59.005 37.500 0.00 0.00 38.17 4.30
5466 5876 5.701290 AGAACATTCTCGAAATTCCGAACTT 59.299 36.000 0.00 0.00 38.17 2.66
5467 5877 5.941948 ACATTCTCGAAATTCCGAACTTT 57.058 34.783 0.00 0.00 38.17 2.66
5468 5878 5.928153 ACATTCTCGAAATTCCGAACTTTC 58.072 37.500 0.00 0.00 38.17 2.62
5492 5907 4.322424 GGTTTTCAATCCGGCCAAATAACT 60.322 41.667 2.24 0.00 0.00 2.24
5501 5916 4.524714 TCCGGCCAAATAACTGAATTTCAA 59.475 37.500 2.24 0.00 0.00 2.69
5502 5917 4.625311 CCGGCCAAATAACTGAATTTCAAC 59.375 41.667 2.24 0.00 0.00 3.18
5507 5922 7.370383 GCCAAATAACTGAATTTCAACTCAGA 58.630 34.615 5.06 0.00 41.38 3.27
5508 5923 7.327032 GCCAAATAACTGAATTTCAACTCAGAC 59.673 37.037 5.06 0.00 41.38 3.51
5510 5925 6.727824 ATAACTGAATTTCAACTCAGACCG 57.272 37.500 5.06 0.00 41.38 4.79
5511 5926 4.073293 ACTGAATTTCAACTCAGACCGT 57.927 40.909 5.06 0.00 41.38 4.83
5513 5928 3.057019 TGAATTTCAACTCAGACCGTCG 58.943 45.455 0.00 0.00 0.00 5.12
5514 5929 3.243602 TGAATTTCAACTCAGACCGTCGA 60.244 43.478 0.00 0.00 0.00 4.20
5515 5930 2.129823 TTTCAACTCAGACCGTCGAC 57.870 50.000 5.18 5.18 0.00 4.20
5516 5931 1.315690 TTCAACTCAGACCGTCGACT 58.684 50.000 14.70 0.00 0.00 4.18
5517 5932 1.315690 TCAACTCAGACCGTCGACTT 58.684 50.000 14.70 0.00 0.00 3.01
5518 5933 1.001706 TCAACTCAGACCGTCGACTTG 60.002 52.381 14.70 8.64 0.00 3.16
5519 5934 1.001706 CAACTCAGACCGTCGACTTGA 60.002 52.381 14.70 10.67 0.00 3.02
5520 5935 1.315690 ACTCAGACCGTCGACTTGAA 58.684 50.000 14.70 0.00 0.00 2.69
5521 5936 1.679680 ACTCAGACCGTCGACTTGAAA 59.320 47.619 14.70 0.00 0.00 2.69
5522 5937 2.296471 ACTCAGACCGTCGACTTGAAAT 59.704 45.455 14.70 1.45 0.00 2.17
5524 5939 1.649171 CAGACCGTCGACTTGAAATCG 59.351 52.381 14.70 0.00 41.00 3.34
5525 5940 1.538512 AGACCGTCGACTTGAAATCGA 59.461 47.619 14.70 0.00 45.90 3.59
5545 5961 1.482593 ACCCTACTTTGATCAGCTCGG 59.517 52.381 0.00 0.00 0.00 4.63
5568 5984 4.499023 CGCACGCATACACGGCAC 62.499 66.667 0.00 0.00 37.37 5.01
5582 5998 1.292223 GGCACGCTGAGAACCTACA 59.708 57.895 0.00 0.00 0.00 2.74
5586 6002 2.755650 CACGCTGAGAACCTACAAACT 58.244 47.619 0.00 0.00 0.00 2.66
5603 6019 4.649705 TGGGGGTGGAGAGCGGAA 62.650 66.667 0.00 0.00 0.00 4.30
5623 6039 4.489771 CCACCGGGCCCAGATCAC 62.490 72.222 24.92 0.00 0.00 3.06
5624 6040 3.716195 CACCGGGCCCAGATCACA 61.716 66.667 24.92 0.00 0.00 3.58
5625 6041 3.402681 ACCGGGCCCAGATCACAG 61.403 66.667 24.92 1.64 0.00 3.66
5626 6042 3.402681 CCGGGCCCAGATCACAGT 61.403 66.667 24.92 0.00 0.00 3.55
5627 6043 2.124983 CGGGCCCAGATCACAGTG 60.125 66.667 24.92 0.00 0.00 3.66
5628 6044 2.959484 CGGGCCCAGATCACAGTGT 61.959 63.158 24.92 0.00 0.00 3.55
5629 6045 1.377725 GGGCCCAGATCACAGTGTG 60.378 63.158 19.95 17.53 34.45 3.82
5630 6046 1.377725 GGCCCAGATCACAGTGTGG 60.378 63.158 22.79 7.06 33.87 4.17
5635 6051 1.539869 AGATCACAGTGTGGGGGCT 60.540 57.895 22.79 11.84 33.87 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.669569 TTGCGGCTCTGCTCAACC 60.670 61.111 0.00 0.00 35.36 3.77
1 2 1.633852 CTCTTGCGGCTCTGCTCAAC 61.634 60.000 0.00 0.00 35.36 3.18
2 3 1.375140 CTCTTGCGGCTCTGCTCAA 60.375 57.895 0.00 0.00 35.36 3.02
3 4 2.223200 CTCTCTTGCGGCTCTGCTCA 62.223 60.000 0.00 0.00 35.36 4.26
4 5 1.519013 CTCTCTTGCGGCTCTGCTC 60.519 63.158 0.00 0.00 35.36 4.26
5 6 2.578128 CTCTCTTGCGGCTCTGCT 59.422 61.111 0.00 0.00 35.36 4.24
6 7 2.511145 CCTCTCTTGCGGCTCTGC 60.511 66.667 0.00 0.00 0.00 4.26
7 8 2.511145 GCCTCTCTTGCGGCTCTG 60.511 66.667 0.00 0.00 40.68 3.35
8 9 3.780173 GGCCTCTCTTGCGGCTCT 61.780 66.667 0.00 0.00 43.22 4.09
13 14 4.521062 CTCCCGGCCTCTCTTGCG 62.521 72.222 0.00 0.00 0.00 4.85
14 15 4.168291 CCTCCCGGCCTCTCTTGC 62.168 72.222 0.00 0.00 0.00 4.01
15 16 1.965754 CTTCCTCCCGGCCTCTCTTG 61.966 65.000 0.00 0.00 0.00 3.02
16 17 1.687493 CTTCCTCCCGGCCTCTCTT 60.687 63.158 0.00 0.00 0.00 2.85
17 18 2.042435 CTTCCTCCCGGCCTCTCT 60.042 66.667 0.00 0.00 0.00 3.10
18 19 3.855853 GCTTCCTCCCGGCCTCTC 61.856 72.222 0.00 0.00 0.00 3.20
28 29 4.400961 ACTGCTGCGGGCTTCCTC 62.401 66.667 13.87 0.00 42.39 3.71
29 30 4.711949 CACTGCTGCGGGCTTCCT 62.712 66.667 13.87 0.00 42.39 3.36
31 32 4.704833 TCCACTGCTGCGGGCTTC 62.705 66.667 13.87 0.00 42.39 3.86
32 33 4.269523 TTCCACTGCTGCGGGCTT 62.270 61.111 13.87 0.00 42.39 4.35
37 38 4.988598 ACCGGTTCCACTGCTGCG 62.989 66.667 0.00 0.00 0.00 5.18
38 39 3.357079 CACCGGTTCCACTGCTGC 61.357 66.667 2.97 0.00 0.00 5.25
39 40 2.669569 CCACCGGTTCCACTGCTG 60.670 66.667 2.97 0.00 0.00 4.41
40 41 3.168528 ACCACCGGTTCCACTGCT 61.169 61.111 2.97 0.00 27.29 4.24
41 42 2.978010 CACCACCGGTTCCACTGC 60.978 66.667 2.97 0.00 31.02 4.40
42 43 2.281484 CCACCACCGGTTCCACTG 60.281 66.667 2.97 0.00 31.02 3.66
43 44 4.265056 GCCACCACCGGTTCCACT 62.265 66.667 2.97 0.00 31.02 4.00
128 129 3.795342 CTAAAACCCGCACCGCCG 61.795 66.667 0.00 0.00 0.00 6.46
129 130 3.436924 CCTAAAACCCGCACCGCC 61.437 66.667 0.00 0.00 0.00 6.13
130 131 3.436924 CCCTAAAACCCGCACCGC 61.437 66.667 0.00 0.00 0.00 5.68
131 132 1.174078 AAACCCTAAAACCCGCACCG 61.174 55.000 0.00 0.00 0.00 4.94
132 133 1.814394 CTAAACCCTAAAACCCGCACC 59.186 52.381 0.00 0.00 0.00 5.01
133 134 2.781923 TCTAAACCCTAAAACCCGCAC 58.218 47.619 0.00 0.00 0.00 5.34
134 135 3.414269 CTTCTAAACCCTAAAACCCGCA 58.586 45.455 0.00 0.00 0.00 5.69
135 136 2.163010 GCTTCTAAACCCTAAAACCCGC 59.837 50.000 0.00 0.00 0.00 6.13
136 137 2.417586 CGCTTCTAAACCCTAAAACCCG 59.582 50.000 0.00 0.00 0.00 5.28
137 138 2.751259 CCGCTTCTAAACCCTAAAACCC 59.249 50.000 0.00 0.00 0.00 4.11
138 139 3.678289 TCCGCTTCTAAACCCTAAAACC 58.322 45.455 0.00 0.00 0.00 3.27
139 140 4.379186 GCTTCCGCTTCTAAACCCTAAAAC 60.379 45.833 0.00 0.00 0.00 2.43
140 141 3.754850 GCTTCCGCTTCTAAACCCTAAAA 59.245 43.478 0.00 0.00 0.00 1.52
141 142 3.340928 GCTTCCGCTTCTAAACCCTAAA 58.659 45.455 0.00 0.00 0.00 1.85
142 143 2.675889 CGCTTCCGCTTCTAAACCCTAA 60.676 50.000 0.00 0.00 0.00 2.69
143 144 1.134907 CGCTTCCGCTTCTAAACCCTA 60.135 52.381 0.00 0.00 0.00 3.53
144 145 0.391263 CGCTTCCGCTTCTAAACCCT 60.391 55.000 0.00 0.00 0.00 4.34
145 146 0.390735 TCGCTTCCGCTTCTAAACCC 60.391 55.000 0.00 0.00 0.00 4.11
146 147 1.593469 GATCGCTTCCGCTTCTAAACC 59.407 52.381 0.00 0.00 0.00 3.27
147 148 1.255600 CGATCGCTTCCGCTTCTAAAC 59.744 52.381 0.26 0.00 0.00 2.01
148 149 1.135199 ACGATCGCTTCCGCTTCTAAA 60.135 47.619 16.60 0.00 0.00 1.85
149 150 0.454600 ACGATCGCTTCCGCTTCTAA 59.545 50.000 16.60 0.00 0.00 2.10
150 151 1.302366 TACGATCGCTTCCGCTTCTA 58.698 50.000 16.60 0.00 0.00 2.10
151 152 0.454600 TTACGATCGCTTCCGCTTCT 59.545 50.000 16.60 0.00 0.00 2.85
152 153 0.571197 GTTACGATCGCTTCCGCTTC 59.429 55.000 16.60 0.00 0.00 3.86
153 154 0.804933 GGTTACGATCGCTTCCGCTT 60.805 55.000 16.60 0.00 0.00 4.68
154 155 1.226888 GGTTACGATCGCTTCCGCT 60.227 57.895 16.60 0.00 0.00 5.52
155 156 0.029834 TAGGTTACGATCGCTTCCGC 59.970 55.000 16.60 0.00 0.00 5.54
156 157 1.925068 GCTAGGTTACGATCGCTTCCG 60.925 57.143 16.60 4.59 0.00 4.30
157 158 1.768510 GCTAGGTTACGATCGCTTCC 58.231 55.000 16.60 14.35 0.00 3.46
158 159 1.268437 ACGCTAGGTTACGATCGCTTC 60.268 52.381 16.60 5.25 0.00 3.86
159 160 0.737219 ACGCTAGGTTACGATCGCTT 59.263 50.000 16.60 0.00 0.00 4.68
160 161 0.029035 CACGCTAGGTTACGATCGCT 59.971 55.000 16.60 6.62 0.00 4.93
161 162 0.028505 TCACGCTAGGTTACGATCGC 59.971 55.000 16.60 0.00 0.00 4.58
162 163 2.682952 ATCACGCTAGGTTACGATCG 57.317 50.000 14.88 14.88 0.00 3.69
163 164 3.251729 TGGTATCACGCTAGGTTACGATC 59.748 47.826 0.00 0.00 0.00 3.69
164 165 3.216800 TGGTATCACGCTAGGTTACGAT 58.783 45.455 0.00 0.00 0.00 3.73
165 166 2.642427 TGGTATCACGCTAGGTTACGA 58.358 47.619 0.00 0.00 0.00 3.43
166 167 3.243301 ACATGGTATCACGCTAGGTTACG 60.243 47.826 0.00 0.00 0.00 3.18
167 168 4.317671 ACATGGTATCACGCTAGGTTAC 57.682 45.455 0.00 0.00 0.00 2.50
168 169 5.829391 TCTTACATGGTATCACGCTAGGTTA 59.171 40.000 0.00 0.00 0.00 2.85
169 170 4.647853 TCTTACATGGTATCACGCTAGGTT 59.352 41.667 0.00 0.00 0.00 3.50
170 171 4.037684 GTCTTACATGGTATCACGCTAGGT 59.962 45.833 0.00 0.00 0.00 3.08
171 172 4.037565 TGTCTTACATGGTATCACGCTAGG 59.962 45.833 0.00 0.00 0.00 3.02
172 173 5.183014 TGTCTTACATGGTATCACGCTAG 57.817 43.478 0.00 0.00 0.00 3.42
173 174 5.585820 TTGTCTTACATGGTATCACGCTA 57.414 39.130 0.00 0.00 0.00 4.26
174 175 4.465632 TTGTCTTACATGGTATCACGCT 57.534 40.909 0.00 0.00 0.00 5.07
175 176 6.479001 ACTTATTGTCTTACATGGTATCACGC 59.521 38.462 0.00 0.00 0.00 5.34
176 177 8.420374 AACTTATTGTCTTACATGGTATCACG 57.580 34.615 0.00 0.00 0.00 4.35
180 181 8.966868 CCCAAAACTTATTGTCTTACATGGTAT 58.033 33.333 0.00 0.00 0.00 2.73
181 182 7.394923 CCCCAAAACTTATTGTCTTACATGGTA 59.605 37.037 0.00 0.00 0.00 3.25
182 183 6.210584 CCCCAAAACTTATTGTCTTACATGGT 59.789 38.462 0.00 0.00 0.00 3.55
183 184 6.435904 TCCCCAAAACTTATTGTCTTACATGG 59.564 38.462 0.00 0.00 0.00 3.66
184 185 7.461182 TCCCCAAAACTTATTGTCTTACATG 57.539 36.000 0.00 0.00 0.00 3.21
185 186 7.039293 GGTTCCCCAAAACTTATTGTCTTACAT 60.039 37.037 0.00 0.00 0.00 2.29
186 187 6.265876 GGTTCCCCAAAACTTATTGTCTTACA 59.734 38.462 0.00 0.00 0.00 2.41
187 188 6.265876 TGGTTCCCCAAAACTTATTGTCTTAC 59.734 38.462 0.00 0.00 37.98 2.34
188 189 6.374588 TGGTTCCCCAAAACTTATTGTCTTA 58.625 36.000 0.00 0.00 37.98 2.10
189 190 5.212745 TGGTTCCCCAAAACTTATTGTCTT 58.787 37.500 0.00 0.00 37.98 3.01
190 191 4.810345 TGGTTCCCCAAAACTTATTGTCT 58.190 39.130 0.00 0.00 37.98 3.41
191 192 4.560716 GCTGGTTCCCCAAAACTTATTGTC 60.561 45.833 0.00 0.00 41.27 3.18
192 193 3.323691 GCTGGTTCCCCAAAACTTATTGT 59.676 43.478 0.00 0.00 41.27 2.71
193 194 3.613910 CGCTGGTTCCCCAAAACTTATTG 60.614 47.826 0.00 0.00 41.27 1.90
194 195 2.560981 CGCTGGTTCCCCAAAACTTATT 59.439 45.455 0.00 0.00 41.27 1.40
195 196 2.167662 CGCTGGTTCCCCAAAACTTAT 58.832 47.619 0.00 0.00 41.27 1.73
196 197 1.611519 CGCTGGTTCCCCAAAACTTA 58.388 50.000 0.00 0.00 41.27 2.24
197 198 1.744320 GCGCTGGTTCCCCAAAACTT 61.744 55.000 0.00 0.00 41.27 2.66
198 199 2.200337 GCGCTGGTTCCCCAAAACT 61.200 57.895 0.00 0.00 41.27 2.66
199 200 2.022240 TTGCGCTGGTTCCCCAAAAC 62.022 55.000 9.73 0.00 41.27 2.43
200 201 1.758514 TTGCGCTGGTTCCCCAAAA 60.759 52.632 9.73 0.00 41.27 2.44
201 202 2.123683 TTGCGCTGGTTCCCCAAA 60.124 55.556 9.73 0.00 41.27 3.28
202 203 2.909965 GTTGCGCTGGTTCCCCAA 60.910 61.111 9.73 0.00 41.27 4.12
203 204 4.966787 GGTTGCGCTGGTTCCCCA 62.967 66.667 9.73 0.00 38.87 4.96
205 206 4.660938 AGGGTTGCGCTGGTTCCC 62.661 66.667 9.73 12.86 38.50 3.97
206 207 2.180159 TAGAGGGTTGCGCTGGTTCC 62.180 60.000 9.73 3.26 0.00 3.62
207 208 0.741221 CTAGAGGGTTGCGCTGGTTC 60.741 60.000 9.73 0.00 0.00 3.62
208 209 1.296715 CTAGAGGGTTGCGCTGGTT 59.703 57.895 9.73 0.00 0.00 3.67
209 210 2.660064 CCTAGAGGGTTGCGCTGGT 61.660 63.158 9.73 0.00 0.00 4.00
210 211 2.187946 CCTAGAGGGTTGCGCTGG 59.812 66.667 9.73 0.00 0.00 4.85
220 221 2.252714 GAGATAAGCCACCCCTAGAGG 58.747 57.143 0.00 0.00 0.00 3.69
221 222 2.964209 TGAGATAAGCCACCCCTAGAG 58.036 52.381 0.00 0.00 0.00 2.43
222 223 3.637821 ATGAGATAAGCCACCCCTAGA 57.362 47.619 0.00 0.00 0.00 2.43
223 224 7.682787 ATATAATGAGATAAGCCACCCCTAG 57.317 40.000 0.00 0.00 0.00 3.02
225 226 9.744125 TTATATATAATGAGATAAGCCACCCCT 57.256 33.333 0.81 0.00 0.00 4.79
247 248 9.866798 TGTACGTATTGTAACACAACCATTATA 57.133 29.630 0.00 0.00 41.40 0.98
248 249 8.774890 TGTACGTATTGTAACACAACCATTAT 57.225 30.769 0.00 0.00 41.40 1.28
249 250 8.774890 ATGTACGTATTGTAACACAACCATTA 57.225 30.769 0.00 0.00 41.40 1.90
250 251 7.675962 ATGTACGTATTGTAACACAACCATT 57.324 32.000 0.00 0.00 41.40 3.16
251 252 8.774890 TTATGTACGTATTGTAACACAACCAT 57.225 30.769 0.00 0.00 41.40 3.55
252 253 7.871973 ACTTATGTACGTATTGTAACACAACCA 59.128 33.333 0.00 0.00 41.40 3.67
253 254 8.243289 ACTTATGTACGTATTGTAACACAACC 57.757 34.615 0.00 0.00 41.40 3.77
276 277 9.848710 TGTTAGACTATGTATAGCTTCTGTACT 57.151 33.333 0.00 0.00 33.68 2.73
282 283 9.557338 CGGTATTGTTAGACTATGTATAGCTTC 57.443 37.037 0.00 0.00 33.68 3.86
283 284 8.027771 GCGGTATTGTTAGACTATGTATAGCTT 58.972 37.037 0.00 0.00 33.68 3.74
284 285 7.176165 TGCGGTATTGTTAGACTATGTATAGCT 59.824 37.037 0.00 0.00 33.68 3.32
285 286 7.310664 TGCGGTATTGTTAGACTATGTATAGC 58.689 38.462 0.00 0.00 33.68 2.97
286 287 8.727910 TCTGCGGTATTGTTAGACTATGTATAG 58.272 37.037 0.00 0.00 36.46 1.31
287 288 8.625786 TCTGCGGTATTGTTAGACTATGTATA 57.374 34.615 0.00 0.00 0.00 1.47
288 289 7.520451 TCTGCGGTATTGTTAGACTATGTAT 57.480 36.000 0.00 0.00 0.00 2.29
289 290 6.947644 TCTGCGGTATTGTTAGACTATGTA 57.052 37.500 0.00 0.00 0.00 2.29
290 291 5.847111 TCTGCGGTATTGTTAGACTATGT 57.153 39.130 0.00 0.00 0.00 2.29
291 292 6.978659 TCTTTCTGCGGTATTGTTAGACTATG 59.021 38.462 0.00 0.00 0.00 2.23
292 293 7.108841 TCTTTCTGCGGTATTGTTAGACTAT 57.891 36.000 0.00 0.00 0.00 2.12
293 294 6.519679 TCTTTCTGCGGTATTGTTAGACTA 57.480 37.500 0.00 0.00 0.00 2.59
294 295 5.401531 TCTTTCTGCGGTATTGTTAGACT 57.598 39.130 0.00 0.00 0.00 3.24
295 296 5.407387 TGTTCTTTCTGCGGTATTGTTAGAC 59.593 40.000 0.00 0.00 0.00 2.59
302 303 3.412386 AGCTTGTTCTTTCTGCGGTATT 58.588 40.909 0.00 0.00 0.00 1.89
366 368 7.899178 TGTGTGATTTTGATAGACGTTGTAT 57.101 32.000 0.00 0.00 0.00 2.29
367 369 7.899178 ATGTGTGATTTTGATAGACGTTGTA 57.101 32.000 0.00 0.00 0.00 2.41
368 370 6.801539 ATGTGTGATTTTGATAGACGTTGT 57.198 33.333 0.00 0.00 0.00 3.32
369 371 9.051027 GTAAATGTGTGATTTTGATAGACGTTG 57.949 33.333 0.00 0.00 0.00 4.10
455 464 9.967451 TTTGTTCCCTATATCAAATGTCACTTA 57.033 29.630 0.00 0.00 0.00 2.24
472 481 9.047947 AGTATTACTAGTTGATCTTTGTTCCCT 57.952 33.333 0.00 0.00 0.00 4.20
473 482 9.315525 GAGTATTACTAGTTGATCTTTGTTCCC 57.684 37.037 0.00 0.00 0.00 3.97
476 485 9.372369 GCAGAGTATTACTAGTTGATCTTTGTT 57.628 33.333 0.00 0.00 0.00 2.83
478 487 8.932945 TGCAGAGTATTACTAGTTGATCTTTG 57.067 34.615 0.00 2.83 0.00 2.77
482 491 6.418226 CCGTTGCAGAGTATTACTAGTTGATC 59.582 42.308 0.00 0.00 0.00 2.92
483 492 6.273825 CCGTTGCAGAGTATTACTAGTTGAT 58.726 40.000 0.00 0.00 0.00 2.57
484 493 5.393787 CCCGTTGCAGAGTATTACTAGTTGA 60.394 44.000 0.00 0.00 0.00 3.18
485 494 4.804139 CCCGTTGCAGAGTATTACTAGTTG 59.196 45.833 0.00 0.00 0.00 3.16
487 496 3.181478 GCCCGTTGCAGAGTATTACTAGT 60.181 47.826 0.00 0.00 40.77 2.57
489 498 2.101917 GGCCCGTTGCAGAGTATTACTA 59.898 50.000 0.00 0.00 43.89 1.82
490 499 1.134491 GGCCCGTTGCAGAGTATTACT 60.134 52.381 0.00 0.00 43.89 2.24
491 500 1.296727 GGCCCGTTGCAGAGTATTAC 58.703 55.000 0.00 0.00 43.89 1.89
492 501 0.179094 CGGCCCGTTGCAGAGTATTA 60.179 55.000 0.00 0.00 43.89 0.98
511 520 1.228184 CCCCTGGCAGAGCATCATC 60.228 63.158 17.94 0.00 37.82 2.92
532 541 4.100808 CAGACTGGGTTTTGAAATTTGGGA 59.899 41.667 0.00 0.00 0.00 4.37
553 562 4.319549 GCTCCCAACGAAAAGTAGAAACAG 60.320 45.833 0.00 0.00 0.00 3.16
558 567 1.614903 TCGCTCCCAACGAAAAGTAGA 59.385 47.619 0.00 0.00 36.44 2.59
559 568 1.993370 CTCGCTCCCAACGAAAAGTAG 59.007 52.381 0.00 0.00 39.39 2.57
589 598 2.543238 CGGAGGATCGTAACTAACCTGC 60.543 54.545 0.00 0.00 36.10 4.85
590 599 2.543238 GCGGAGGATCGTAACTAACCTG 60.543 54.545 0.00 0.00 34.37 4.00
591 600 1.680207 GCGGAGGATCGTAACTAACCT 59.320 52.381 0.00 0.00 34.37 3.50
754 771 2.415857 GCTGCACAGATGACAGAAGAAG 59.584 50.000 0.81 0.00 34.03 2.85
756 773 1.338484 GGCTGCACAGATGACAGAAGA 60.338 52.381 0.50 0.00 34.03 2.87
912 950 3.036959 TCCCTCCCTCCCTCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
1063 1164 1.632948 GAACCCACGCGAAACTAGCC 61.633 60.000 15.93 0.00 0.00 3.93
1141 1244 4.885413 TGGACTCGAAAATACGAAGGAAA 58.115 39.130 0.00 0.00 41.67 3.13
1151 1254 2.290071 ACACCGGATTGGACTCGAAAAT 60.290 45.455 9.46 0.00 42.00 1.82
1173 1276 0.807496 GAACCAAGCAGCATCTGGAC 59.193 55.000 13.63 5.29 31.21 4.02
1278 1391 2.636768 CTCAAAATGCGGAGGAAACC 57.363 50.000 0.00 0.00 0.00 3.27
1294 1407 2.434331 CCGGGGAAAACAGCCTCA 59.566 61.111 0.00 0.00 0.00 3.86
1360 1473 2.024414 GGAGATGGAACCCAAATTCGG 58.976 52.381 0.00 0.00 36.95 4.30
1384 1498 2.094659 CGACTCGCACGGAAATGCT 61.095 57.895 0.00 0.00 43.80 3.79
1394 1508 0.668096 ATTAACGCAACCGACTCGCA 60.668 50.000 0.00 0.00 38.29 5.10
1418 1532 0.380378 CAACACCACACCAAACGGAG 59.620 55.000 0.00 0.00 0.00 4.63
1420 1534 1.032657 TCCAACACCACACCAAACGG 61.033 55.000 0.00 0.00 0.00 4.44
1422 1536 4.657436 TTAATCCAACACCACACCAAAC 57.343 40.909 0.00 0.00 0.00 2.93
1423 1537 5.878406 AATTAATCCAACACCACACCAAA 57.122 34.783 0.00 0.00 0.00 3.28
1435 1567 4.837860 AGTCAGTTGGCCAAATTAATCCAA 59.162 37.500 22.47 2.92 36.35 3.53
1442 1574 1.708341 AGCAGTCAGTTGGCCAAATT 58.292 45.000 22.47 9.04 0.00 1.82
1450 1582 1.027357 AGCAACCAAGCAGTCAGTTG 58.973 50.000 0.00 0.00 41.94 3.16
1454 1586 1.024271 GTTCAGCAACCAAGCAGTCA 58.976 50.000 0.00 0.00 36.85 3.41
1457 1589 2.223876 ACATTGTTCAGCAACCAAGCAG 60.224 45.455 0.00 0.00 40.28 4.24
1462 1594 1.202394 GCACACATTGTTCAGCAACCA 60.202 47.619 0.00 0.00 40.28 3.67
1585 1717 1.144057 GGATGTCGAGGCCGTTGAT 59.856 57.895 0.00 0.00 37.05 2.57
1586 1718 1.613317 ATGGATGTCGAGGCCGTTGA 61.613 55.000 0.00 0.00 37.05 3.18
1700 1833 0.962356 CGGCCTGAACCAGAAGCATT 60.962 55.000 0.00 0.00 32.44 3.56
1701 1834 1.377725 CGGCCTGAACCAGAAGCAT 60.378 57.895 0.00 0.00 32.44 3.79
1702 1835 2.032528 CGGCCTGAACCAGAAGCA 59.967 61.111 0.00 0.00 32.44 3.91
1703 1836 0.678048 ATTCGGCCTGAACCAGAAGC 60.678 55.000 11.39 0.00 40.00 3.86
1704 1837 1.339055 TGATTCGGCCTGAACCAGAAG 60.339 52.381 11.39 0.00 40.00 2.85
1705 1838 0.690192 TGATTCGGCCTGAACCAGAA 59.310 50.000 11.39 1.14 40.00 3.02
1706 1839 2.371784 TGATTCGGCCTGAACCAGA 58.628 52.632 11.39 0.00 40.00 3.86
1713 1846 2.322355 ACATTCTCTGATTCGGCCTG 57.678 50.000 0.00 0.00 0.00 4.85
1715 1848 4.168760 CAAAAACATTCTCTGATTCGGCC 58.831 43.478 0.00 0.00 0.00 6.13
1758 1892 7.169813 CAGTAGAACTTTTGCCAATTTTTCCTC 59.830 37.037 0.00 0.00 0.00 3.71
1766 1900 5.539955 ACCAATCAGTAGAACTTTTGCCAAT 59.460 36.000 0.00 0.00 0.00 3.16
1807 1942 9.145865 CAGTCTCAGATTTTTCCTCTAGTAAAC 57.854 37.037 0.00 0.00 0.00 2.01
1810 1945 7.670140 TCACAGTCTCAGATTTTTCCTCTAGTA 59.330 37.037 0.00 0.00 0.00 1.82
1820 1955 6.106648 TCAGTCATCACAGTCTCAGATTTT 57.893 37.500 0.00 0.00 0.00 1.82
1823 1958 5.187381 ACATTCAGTCATCACAGTCTCAGAT 59.813 40.000 0.00 0.00 0.00 2.90
1845 2002 6.093495 CAGAGACAGGAAACAAAACTACAACA 59.907 38.462 0.00 0.00 0.00 3.33
1846 2003 6.487103 CAGAGACAGGAAACAAAACTACAAC 58.513 40.000 0.00 0.00 0.00 3.32
1919 2076 2.726989 GCAGCACTGTTCAATCATGTCG 60.727 50.000 0.00 0.00 0.00 4.35
1936 2093 2.288152 TGTTTTCCAAGGAAATCGCAGC 60.288 45.455 14.54 0.00 42.71 5.25
1988 2145 4.223700 TGCAGAGTTGAGTTGACCAGATAT 59.776 41.667 0.00 0.00 0.00 1.63
1997 2154 1.972872 AAGGGTGCAGAGTTGAGTTG 58.027 50.000 0.00 0.00 0.00 3.16
2019 2176 5.908341 TGTTTTGACCCAAGGAATACAAAC 58.092 37.500 0.00 0.00 0.00 2.93
2097 2256 1.869767 GATGCATAACTCTCTTGGCCG 59.130 52.381 0.00 0.00 0.00 6.13
2133 2292 1.303561 CCACACATGGGTCCCACTG 60.304 63.158 14.57 14.12 43.04 3.66
2144 2303 7.068103 TCGATTCCTTAATAAAATGCCACACAT 59.932 33.333 0.00 0.00 42.30 3.21
2180 2340 4.149598 TCATATACCGTGGATGCTACAGT 58.850 43.478 0.00 0.00 0.00 3.55
2200 2360 8.378565 AGAAAAACTAGACCATCAGAAGAATCA 58.621 33.333 0.00 0.00 0.00 2.57
2230 2390 8.367911 TGCTGAGACGTAATCTTCCATTATTAT 58.632 33.333 0.00 0.00 38.00 1.28
2235 2395 4.471904 TGCTGAGACGTAATCTTCCATT 57.528 40.909 0.00 0.00 38.00 3.16
2236 2396 4.343526 AGATGCTGAGACGTAATCTTCCAT 59.656 41.667 0.00 0.00 38.00 3.41
2237 2397 3.701542 AGATGCTGAGACGTAATCTTCCA 59.298 43.478 0.00 0.00 38.00 3.53
2238 2398 4.047822 CAGATGCTGAGACGTAATCTTCC 58.952 47.826 0.00 0.00 38.00 3.46
2241 2401 2.428530 TGCAGATGCTGAGACGTAATCT 59.571 45.455 6.35 0.00 40.63 2.40
2242 2402 2.814269 TGCAGATGCTGAGACGTAATC 58.186 47.619 6.35 0.00 42.66 1.75
2243 2403 2.967599 TGCAGATGCTGAGACGTAAT 57.032 45.000 6.35 0.00 42.66 1.89
2245 2405 1.750778 TGATGCAGATGCTGAGACGTA 59.249 47.619 6.35 0.00 42.66 3.57
2246 2406 0.533951 TGATGCAGATGCTGAGACGT 59.466 50.000 6.35 0.00 42.66 4.34
2247 2407 1.593469 CTTGATGCAGATGCTGAGACG 59.407 52.381 6.35 0.00 42.66 4.18
2248 2408 2.352034 CACTTGATGCAGATGCTGAGAC 59.648 50.000 6.35 0.00 42.66 3.36
2249 2409 2.235402 TCACTTGATGCAGATGCTGAGA 59.765 45.455 6.35 0.00 42.66 3.27
2250 2410 2.609916 CTCACTTGATGCAGATGCTGAG 59.390 50.000 6.35 5.83 42.66 3.35
2251 2411 2.629051 CTCACTTGATGCAGATGCTGA 58.371 47.619 6.35 0.00 42.66 4.26
2252 2412 1.671328 CCTCACTTGATGCAGATGCTG 59.329 52.381 6.35 0.00 42.66 4.41
2256 2416 1.003928 TGTGCCTCACTTGATGCAGAT 59.996 47.619 9.17 0.00 44.21 2.90
2356 2534 6.710295 GTGGTTAATTGGCCTTTCTTGAAAAT 59.290 34.615 3.32 0.00 0.00 1.82
2381 2560 5.207110 AGCAATCACAGGCATACTAGTAG 57.793 43.478 8.85 0.00 0.00 2.57
2384 2563 5.468072 CCTAAAGCAATCACAGGCATACTAG 59.532 44.000 0.00 0.00 0.00 2.57
2504 2849 9.582431 TGCTTGTGATAACACTAAACTATAGAC 57.418 33.333 6.78 0.00 46.07 2.59
2537 2883 2.479566 TTAACTGAAGCTCCCAGCAG 57.520 50.000 13.98 7.28 45.56 4.24
2539 2885 2.991250 TCATTAACTGAAGCTCCCAGC 58.009 47.619 13.98 0.00 42.84 4.85
2540 2886 4.946157 ACATTCATTAACTGAAGCTCCCAG 59.054 41.667 12.84 12.84 46.71 4.45
2541 2887 4.922206 ACATTCATTAACTGAAGCTCCCA 58.078 39.130 0.00 0.00 46.71 4.37
2542 2888 6.183360 GGTTACATTCATTAACTGAAGCTCCC 60.183 42.308 0.00 0.00 46.71 4.30
2562 2908 5.116882 CCCTAAGATGCTGTTAGTGGTTAC 58.883 45.833 0.00 0.00 0.00 2.50
2568 2914 2.092914 GCACCCCTAAGATGCTGTTAGT 60.093 50.000 0.00 0.00 36.40 2.24
2569 2915 2.092968 TGCACCCCTAAGATGCTGTTAG 60.093 50.000 0.00 0.00 40.13 2.34
2576 2922 1.838112 TTGCTTGCACCCCTAAGATG 58.162 50.000 0.00 0.00 0.00 2.90
2610 2956 5.925506 TGATGAATTGCACCATGAAGATT 57.074 34.783 0.00 0.00 0.00 2.40
2644 2990 4.093850 GCAATCCCTGTTGATGCAAAAATC 59.906 41.667 0.00 0.00 0.00 2.17
2677 3023 2.220586 TTGACACGGCCTCCATGGA 61.221 57.895 15.27 15.27 38.35 3.41
2841 3188 0.459759 GTACAACCCTACGAGGCAGC 60.460 60.000 0.00 0.00 32.73 5.25
2868 3215 4.808558 TGCAGGCACAAGAAACATTAATC 58.191 39.130 0.00 0.00 0.00 1.75
2884 3231 3.084786 AGTTTCCAGATAAACTGCAGGC 58.915 45.455 19.93 1.69 45.60 4.85
2898 3245 6.773976 AAACAATTCAGACTCAAGTTTCCA 57.226 33.333 0.00 0.00 0.00 3.53
2918 3265 7.539710 ACTTGAAACTTTTCCTCGTTTGTAAAC 59.460 33.333 0.00 0.00 36.36 2.01
2927 3274 6.554334 TCCATTACTTGAAACTTTTCCTCG 57.446 37.500 0.00 0.00 36.36 4.63
2949 3296 6.597280 ACTGAGGATTCTTCAGCAATACTTTC 59.403 38.462 21.86 0.00 35.08 2.62
3029 3376 5.965334 CGCAAGTTCATGTAAACATACATCC 59.035 40.000 0.00 0.00 38.51 3.51
3098 3445 8.599624 ATCCTGAAATACAAAATCCAAGATGT 57.400 30.769 0.00 0.00 0.00 3.06
3129 3476 6.975196 TCCTTGTTCATTGAATCCTTTTCA 57.025 33.333 1.78 0.00 0.00 2.69
3147 3494 1.926511 GCACTGCCGGTTCATCCTTG 61.927 60.000 1.90 0.00 0.00 3.61
3227 3574 9.872684 ATTGTTCCTTACCATGAGATTTATCAT 57.127 29.630 0.00 0.00 40.59 2.45
3294 3641 7.807977 TCTGGTATTATCATCTTTTTGAGCC 57.192 36.000 0.00 0.00 0.00 4.70
3342 3689 5.414454 TGATTTCTCCAAATGTTCCTTACCG 59.586 40.000 0.00 0.00 31.94 4.02
3433 3780 2.496817 CTTCTCGGAAGGGCGGAG 59.503 66.667 5.92 0.00 43.26 4.63
3501 3848 4.959210 TCAGGAAATTTCACCAAACCAGAA 59.041 37.500 19.49 0.00 0.00 3.02
3509 3856 4.705110 TCTGTCTCAGGAAATTTCACCA 57.295 40.909 19.49 5.73 31.51 4.17
3584 3931 6.017440 CCTGTTATTCTCTTTTTCGACACCAA 60.017 38.462 0.00 0.00 0.00 3.67
3725 4072 7.280652 TGTTTGTAGTTTTACCACTTGTAGGAC 59.719 37.037 0.00 0.00 0.00 3.85
3730 4077 5.163591 GCCTGTTTGTAGTTTTACCACTTGT 60.164 40.000 0.00 0.00 0.00 3.16
3757 4104 3.609853 CATTCGGATTGGAAACAGGAGA 58.390 45.455 0.00 0.00 44.54 3.71
3763 4110 1.064060 CGCTCCATTCGGATTGGAAAC 59.936 52.381 19.09 14.06 42.56 2.78
3843 4190 3.136443 TGTGTCCAAGATCTTCCAAGTGT 59.864 43.478 4.57 0.00 0.00 3.55
3858 4205 0.383590 CATTTTGCACCGTGTGTCCA 59.616 50.000 0.00 0.00 35.75 4.02
4008 4355 1.608590 ACATCTTTGTCAACCAAGCGG 59.391 47.619 0.00 0.00 33.75 5.52
4016 4363 1.266718 GCCGAAGCACATCTTTGTCAA 59.733 47.619 0.00 0.00 39.53 3.18
4404 4760 3.902467 CCATCATCCTCTCTTCCTCATCA 59.098 47.826 0.00 0.00 0.00 3.07
4413 4769 2.761809 AGCTTGTCCATCATCCTCTCT 58.238 47.619 0.00 0.00 0.00 3.10
4435 4791 7.122501 TGAACCTTTCTTGCTATAATGCATCAA 59.877 33.333 0.00 0.00 42.96 2.57
4536 4940 1.143838 CGGGCTGACGGATTCATGA 59.856 57.895 0.00 0.00 32.17 3.07
4546 4950 4.021925 AGCTTCACCCGGGCTGAC 62.022 66.667 24.08 12.30 34.82 3.51
4715 5119 5.647658 CCAATTCTGAAAGTATACACAGGCA 59.352 40.000 17.91 10.15 33.76 4.75
4759 5163 1.903404 TGAGCTCTGACTCACGGCA 60.903 57.895 16.19 0.00 41.72 5.69
4804 5208 5.465532 AAAACACATGCACATAACATCCA 57.534 34.783 0.00 0.00 0.00 3.41
4805 5209 4.558470 CGAAAACACATGCACATAACATCC 59.442 41.667 0.00 0.00 0.00 3.51
4810 5214 2.556189 AGGCGAAAACACATGCACATAA 59.444 40.909 0.00 0.00 0.00 1.90
4874 5279 2.513204 CCCACTCCAGCAGCGATG 60.513 66.667 0.00 0.00 0.00 3.84
4878 5283 3.958860 ACCACCCACTCCAGCAGC 61.959 66.667 0.00 0.00 0.00 5.25
4932 5337 5.336849 CCGAAATCCTATCACCTGTATCCTC 60.337 48.000 0.00 0.00 0.00 3.71
5046 5454 8.879342 AATTCTGAAGTACTAGTACATGATGC 57.121 34.615 29.87 12.32 38.48 3.91
5123 5533 9.853177 CCTATAGAATTCCTACAAAAACCTCAT 57.147 33.333 0.00 0.00 0.00 2.90
5124 5534 9.053472 TCCTATAGAATTCCTACAAAAACCTCA 57.947 33.333 0.00 0.00 0.00 3.86
5135 5545 9.560860 TGCAAATCCTATCCTATAGAATTCCTA 57.439 33.333 0.00 0.00 0.00 2.94
5136 5546 8.454859 TGCAAATCCTATCCTATAGAATTCCT 57.545 34.615 0.00 0.00 0.00 3.36
5137 5547 9.520515 TTTGCAAATCCTATCCTATAGAATTCC 57.479 33.333 8.05 0.00 0.00 3.01
5139 5549 9.525826 CCTTTGCAAATCCTATCCTATAGAATT 57.474 33.333 13.23 0.00 0.00 2.17
5140 5550 8.894592 TCCTTTGCAAATCCTATCCTATAGAAT 58.105 33.333 13.23 0.00 0.00 2.40
5141 5551 8.275187 TCCTTTGCAAATCCTATCCTATAGAA 57.725 34.615 13.23 0.00 0.00 2.10
5143 5553 8.924511 TTTCCTTTGCAAATCCTATCCTATAG 57.075 34.615 13.23 0.00 0.00 1.31
5144 5554 9.707957 TTTTTCCTTTGCAAATCCTATCCTATA 57.292 29.630 13.23 0.00 0.00 1.31
5145 5555 8.608185 TTTTTCCTTTGCAAATCCTATCCTAT 57.392 30.769 13.23 0.00 0.00 2.57
5146 5556 8.608185 ATTTTTCCTTTGCAAATCCTATCCTA 57.392 30.769 13.23 0.00 0.00 2.94
5147 5557 6.933514 TTTTTCCTTTGCAAATCCTATCCT 57.066 33.333 13.23 0.00 0.00 3.24
5148 5558 8.043113 AGAATTTTTCCTTTGCAAATCCTATCC 58.957 33.333 13.23 0.00 0.00 2.59
5149 5559 9.440773 AAGAATTTTTCCTTTGCAAATCCTATC 57.559 29.630 13.23 4.58 0.00 2.08
5150 5560 9.797642 AAAGAATTTTTCCTTTGCAAATCCTAT 57.202 25.926 13.23 0.00 31.62 2.57
5151 5561 9.054922 CAAAGAATTTTTCCTTTGCAAATCCTA 57.945 29.630 13.23 0.00 41.56 2.94
5152 5562 7.774625 TCAAAGAATTTTTCCTTTGCAAATCCT 59.225 29.630 13.23 0.00 45.22 3.24
5153 5563 7.929159 TCAAAGAATTTTTCCTTTGCAAATCC 58.071 30.769 13.23 0.00 45.22 3.01
5154 5564 9.442033 CTTCAAAGAATTTTTCCTTTGCAAATC 57.558 29.630 13.23 4.69 45.22 2.17
5155 5565 7.916977 GCTTCAAAGAATTTTTCCTTTGCAAAT 59.083 29.630 13.23 0.00 45.22 2.32
5156 5566 7.249858 GCTTCAAAGAATTTTTCCTTTGCAAA 58.750 30.769 12.14 12.14 45.22 3.68
5157 5567 6.183360 GGCTTCAAAGAATTTTTCCTTTGCAA 60.183 34.615 10.86 0.00 45.22 4.08
5158 5568 5.296531 GGCTTCAAAGAATTTTTCCTTTGCA 59.703 36.000 10.86 2.37 45.22 4.08
5159 5569 5.277974 GGGCTTCAAAGAATTTTTCCTTTGC 60.278 40.000 10.86 2.60 45.22 3.68
5160 5570 6.057533 AGGGCTTCAAAGAATTTTTCCTTTG 58.942 36.000 9.85 9.85 46.30 2.77
5161 5571 6.252599 AGGGCTTCAAAGAATTTTTCCTTT 57.747 33.333 0.00 0.00 35.03 3.11
5162 5572 5.894298 AGGGCTTCAAAGAATTTTTCCTT 57.106 34.783 0.00 0.00 35.03 3.36
5163 5573 5.894298 AAGGGCTTCAAAGAATTTTTCCT 57.106 34.783 0.00 0.00 35.03 3.36
5164 5574 5.239306 CCAAAGGGCTTCAAAGAATTTTTCC 59.761 40.000 0.00 0.00 35.03 3.13
5165 5575 5.822519 ACCAAAGGGCTTCAAAGAATTTTTC 59.177 36.000 0.00 0.00 34.29 2.29
5166 5576 5.754782 ACCAAAGGGCTTCAAAGAATTTTT 58.245 33.333 0.00 0.00 34.29 1.94
5167 5577 5.372343 ACCAAAGGGCTTCAAAGAATTTT 57.628 34.783 0.00 0.00 34.29 1.82
5168 5578 5.372343 AACCAAAGGGCTTCAAAGAATTT 57.628 34.783 0.00 0.00 36.61 1.82
5169 5579 5.125356 CAAACCAAAGGGCTTCAAAGAATT 58.875 37.500 0.00 0.00 37.90 2.17
5170 5580 4.164030 ACAAACCAAAGGGCTTCAAAGAAT 59.836 37.500 0.00 0.00 37.90 2.40
5171 5581 3.517500 ACAAACCAAAGGGCTTCAAAGAA 59.482 39.130 0.00 0.00 37.90 2.52
5172 5582 3.103742 ACAAACCAAAGGGCTTCAAAGA 58.896 40.909 0.00 0.00 37.90 2.52
5173 5583 3.541996 ACAAACCAAAGGGCTTCAAAG 57.458 42.857 0.00 0.00 37.90 2.77
5174 5584 3.386402 CCTACAAACCAAAGGGCTTCAAA 59.614 43.478 0.00 0.00 37.90 2.69
5175 5585 2.962421 CCTACAAACCAAAGGGCTTCAA 59.038 45.455 0.00 0.00 37.90 2.69
5176 5586 2.175931 TCCTACAAACCAAAGGGCTTCA 59.824 45.455 0.00 0.00 37.90 3.02
5177 5587 2.871453 TCCTACAAACCAAAGGGCTTC 58.129 47.619 0.00 0.00 37.90 3.86
5178 5588 3.322191 TTCCTACAAACCAAAGGGCTT 57.678 42.857 0.00 0.00 37.90 4.35
5179 5589 3.165071 CATTCCTACAAACCAAAGGGCT 58.835 45.455 0.00 0.00 37.90 5.19
5180 5590 2.233676 CCATTCCTACAAACCAAAGGGC 59.766 50.000 0.00 0.00 37.90 5.19
5181 5591 3.773560 TCCATTCCTACAAACCAAAGGG 58.226 45.455 0.00 0.00 41.29 3.95
5182 5592 5.965922 GAATCCATTCCTACAAACCAAAGG 58.034 41.667 0.00 0.00 0.00 3.11
5196 5606 7.624549 TGCTACATAGGAATAGGAATCCATTC 58.375 38.462 0.61 8.71 39.55 2.67
5197 5607 7.574021 TGCTACATAGGAATAGGAATCCATT 57.426 36.000 0.61 0.00 39.55 3.16
5198 5608 7.761981 ATGCTACATAGGAATAGGAATCCAT 57.238 36.000 0.61 0.00 39.55 3.41
5199 5609 7.345653 CCTATGCTACATAGGAATAGGAATCCA 59.654 40.741 23.51 0.00 42.90 3.41
5200 5610 7.565398 TCCTATGCTACATAGGAATAGGAATCC 59.435 40.741 26.57 0.00 45.11 3.01
5201 5611 8.540507 TCCTATGCTACATAGGAATAGGAATC 57.459 38.462 26.57 0.00 45.11 2.52
5210 5620 7.187824 GGATTGATTCCTATGCTACATAGGA 57.812 40.000 25.51 25.51 46.07 2.94
5224 5634 6.284891 TCCAAAACATGAAGGATTGATTCC 57.715 37.500 0.00 0.00 45.85 3.01
5225 5635 6.153340 TCCTCCAAAACATGAAGGATTGATTC 59.847 38.462 0.00 0.00 31.25 2.52
5226 5636 6.018469 TCCTCCAAAACATGAAGGATTGATT 58.982 36.000 0.00 0.00 31.25 2.57
5227 5637 5.582953 TCCTCCAAAACATGAAGGATTGAT 58.417 37.500 0.00 0.00 31.25 2.57
5228 5638 4.996793 TCCTCCAAAACATGAAGGATTGA 58.003 39.130 0.00 0.00 31.25 2.57
5229 5639 5.726980 TTCCTCCAAAACATGAAGGATTG 57.273 39.130 0.00 0.00 36.09 2.67
5230 5640 6.745794 TTTTCCTCCAAAACATGAAGGATT 57.254 33.333 0.00 0.00 36.09 3.01
5231 5641 6.745794 TTTTTCCTCCAAAACATGAAGGAT 57.254 33.333 0.00 0.00 36.09 3.24
5253 5663 8.635765 TTCATTGAGTCTAGGCTAATGTTTTT 57.364 30.769 18.08 0.00 32.22 1.94
5254 5664 8.635765 TTTCATTGAGTCTAGGCTAATGTTTT 57.364 30.769 18.08 0.00 32.22 2.43
5255 5665 8.635765 TTTTCATTGAGTCTAGGCTAATGTTT 57.364 30.769 18.08 0.00 32.22 2.83
5256 5666 8.635765 TTTTTCATTGAGTCTAGGCTAATGTT 57.364 30.769 18.08 0.00 32.22 2.71
5284 5694 9.552695 AGATGTCATTTGATGTATAGGATAGGA 57.447 33.333 0.00 0.00 0.00 2.94
5285 5695 9.814899 GAGATGTCATTTGATGTATAGGATAGG 57.185 37.037 0.00 0.00 0.00 2.57
5289 5699 9.770097 GAAAGAGATGTCATTTGATGTATAGGA 57.230 33.333 0.00 0.00 0.00 2.94
5290 5700 9.775854 AGAAAGAGATGTCATTTGATGTATAGG 57.224 33.333 0.00 0.00 0.00 2.57
5308 5718 9.113838 GCATGTCAATTCCTATAAAGAAAGAGA 57.886 33.333 0.00 0.00 0.00 3.10
5309 5719 8.896744 TGCATGTCAATTCCTATAAAGAAAGAG 58.103 33.333 0.00 0.00 0.00 2.85
5310 5720 8.806429 TGCATGTCAATTCCTATAAAGAAAGA 57.194 30.769 0.00 0.00 0.00 2.52
5311 5721 9.459640 CATGCATGTCAATTCCTATAAAGAAAG 57.540 33.333 18.91 0.00 0.00 2.62
5312 5722 8.970020 ACATGCATGTCAATTCCTATAAAGAAA 58.030 29.630 26.61 0.00 35.87 2.52
5313 5723 8.523915 ACATGCATGTCAATTCCTATAAAGAA 57.476 30.769 26.61 0.00 35.87 2.52
5314 5724 8.523915 AACATGCATGTCAATTCCTATAAAGA 57.476 30.769 31.45 0.00 40.80 2.52
5317 5727 9.797642 AGATAACATGCATGTCAATTCCTATAA 57.202 29.630 31.45 1.39 40.80 0.98
5318 5728 9.440773 GAGATAACATGCATGTCAATTCCTATA 57.559 33.333 31.45 17.10 40.80 1.31
5319 5729 7.940688 TGAGATAACATGCATGTCAATTCCTAT 59.059 33.333 31.45 22.01 40.80 2.57
5320 5730 7.227314 GTGAGATAACATGCATGTCAATTCCTA 59.773 37.037 31.45 18.48 40.80 2.94
5321 5731 6.039047 GTGAGATAACATGCATGTCAATTCCT 59.961 38.462 31.45 19.97 40.80 3.36
5322 5732 6.039047 AGTGAGATAACATGCATGTCAATTCC 59.961 38.462 31.45 20.42 40.80 3.01
5323 5733 7.024340 AGTGAGATAACATGCATGTCAATTC 57.976 36.000 31.45 24.09 40.80 2.17
5324 5734 7.400599 AAGTGAGATAACATGCATGTCAATT 57.599 32.000 31.45 24.41 40.80 2.32
5325 5735 6.039047 GGAAGTGAGATAACATGCATGTCAAT 59.961 38.462 31.45 25.72 40.80 2.57
5326 5736 5.355071 GGAAGTGAGATAACATGCATGTCAA 59.645 40.000 31.45 22.45 40.80 3.18
5327 5737 4.877823 GGAAGTGAGATAACATGCATGTCA 59.122 41.667 31.45 19.75 40.80 3.58
5328 5738 5.121811 AGGAAGTGAGATAACATGCATGTC 58.878 41.667 31.45 19.41 40.80 3.06
5329 5739 5.108187 AGGAAGTGAGATAACATGCATGT 57.892 39.130 26.61 26.61 44.20 3.21
5330 5740 6.932960 TCATAGGAAGTGAGATAACATGCATG 59.067 38.462 25.09 25.09 0.00 4.06
5331 5741 7.071069 TCATAGGAAGTGAGATAACATGCAT 57.929 36.000 0.00 0.00 0.00 3.96
5332 5742 6.484364 TCATAGGAAGTGAGATAACATGCA 57.516 37.500 0.00 0.00 0.00 3.96
5333 5743 7.443575 ACAATCATAGGAAGTGAGATAACATGC 59.556 37.037 0.00 0.00 0.00 4.06
5334 5744 8.899427 ACAATCATAGGAAGTGAGATAACATG 57.101 34.615 0.00 0.00 0.00 3.21
5335 5745 9.553064 GAACAATCATAGGAAGTGAGATAACAT 57.447 33.333 0.00 0.00 0.00 2.71
5336 5746 8.762645 AGAACAATCATAGGAAGTGAGATAACA 58.237 33.333 0.00 0.00 0.00 2.41
5340 5750 9.995003 GAATAGAACAATCATAGGAAGTGAGAT 57.005 33.333 0.00 0.00 0.00 2.75
5341 5751 8.424918 GGAATAGAACAATCATAGGAAGTGAGA 58.575 37.037 0.00 0.00 0.00 3.27
5342 5752 8.428063 AGGAATAGAACAATCATAGGAAGTGAG 58.572 37.037 0.00 0.00 0.00 3.51
5343 5753 8.324191 AGGAATAGAACAATCATAGGAAGTGA 57.676 34.615 0.00 0.00 0.00 3.41
5365 5775 8.810041 GGTTCGTAGGATAGGAATTTTATAGGA 58.190 37.037 0.00 0.00 45.71 2.94
5366 5776 8.591072 TGGTTCGTAGGATAGGAATTTTATAGG 58.409 37.037 0.00 0.00 45.71 2.57
5367 5777 9.991906 TTGGTTCGTAGGATAGGAATTTTATAG 57.008 33.333 0.00 0.00 45.71 1.31
5369 5779 9.338622 CTTTGGTTCGTAGGATAGGAATTTTAT 57.661 33.333 0.00 0.00 45.71 1.40
5370 5780 8.542080 TCTTTGGTTCGTAGGATAGGAATTTTA 58.458 33.333 0.00 0.00 45.71 1.52
5371 5781 7.399634 TCTTTGGTTCGTAGGATAGGAATTTT 58.600 34.615 0.00 0.00 45.71 1.82
5372 5782 6.954232 TCTTTGGTTCGTAGGATAGGAATTT 58.046 36.000 0.00 0.00 45.71 1.82
5373 5783 6.555463 TCTTTGGTTCGTAGGATAGGAATT 57.445 37.500 0.00 0.00 45.71 2.17
5374 5784 6.408206 CCTTCTTTGGTTCGTAGGATAGGAAT 60.408 42.308 0.00 0.00 45.71 3.01
5375 5785 5.105064 CCTTCTTTGGTTCGTAGGATAGGAA 60.105 44.000 0.00 0.00 42.49 3.36
5376 5786 4.404715 CCTTCTTTGGTTCGTAGGATAGGA 59.595 45.833 0.00 0.00 33.01 2.94
5377 5787 4.694339 CCTTCTTTGGTTCGTAGGATAGG 58.306 47.826 0.00 0.00 0.00 2.57
5378 5788 4.120589 GCCTTCTTTGGTTCGTAGGATAG 58.879 47.826 0.00 0.00 0.00 2.08
5379 5789 3.118519 GGCCTTCTTTGGTTCGTAGGATA 60.119 47.826 0.00 0.00 0.00 2.59
5380 5790 2.355818 GGCCTTCTTTGGTTCGTAGGAT 60.356 50.000 0.00 0.00 0.00 3.24
5381 5791 1.002773 GGCCTTCTTTGGTTCGTAGGA 59.997 52.381 0.00 0.00 0.00 2.94
5382 5792 1.003233 AGGCCTTCTTTGGTTCGTAGG 59.997 52.381 0.00 0.00 0.00 3.18
5383 5793 2.289444 TGAGGCCTTCTTTGGTTCGTAG 60.289 50.000 6.77 0.00 0.00 3.51
5384 5794 1.695242 TGAGGCCTTCTTTGGTTCGTA 59.305 47.619 6.77 0.00 0.00 3.43
5385 5795 0.472471 TGAGGCCTTCTTTGGTTCGT 59.528 50.000 6.77 0.00 0.00 3.85
5386 5796 1.160137 CTGAGGCCTTCTTTGGTTCG 58.840 55.000 6.77 0.00 0.00 3.95
5387 5797 2.155279 GACTGAGGCCTTCTTTGGTTC 58.845 52.381 6.77 0.00 0.00 3.62
5388 5798 1.777272 AGACTGAGGCCTTCTTTGGTT 59.223 47.619 6.77 0.00 0.00 3.67
5389 5799 1.072965 CAGACTGAGGCCTTCTTTGGT 59.927 52.381 6.77 0.00 0.00 3.67
5390 5800 1.072965 ACAGACTGAGGCCTTCTTTGG 59.927 52.381 6.77 0.00 0.00 3.28
5391 5801 2.557920 ACAGACTGAGGCCTTCTTTG 57.442 50.000 6.77 5.16 0.00 2.77
5392 5802 3.840666 TGATACAGACTGAGGCCTTCTTT 59.159 43.478 6.77 1.13 0.00 2.52
5393 5803 3.445008 TGATACAGACTGAGGCCTTCTT 58.555 45.455 6.77 0.00 0.00 2.52
5394 5804 3.107402 TGATACAGACTGAGGCCTTCT 57.893 47.619 6.77 2.31 0.00 2.85
5395 5805 3.726607 CATGATACAGACTGAGGCCTTC 58.273 50.000 6.77 0.00 0.00 3.46
5396 5806 2.158842 GCATGATACAGACTGAGGCCTT 60.159 50.000 6.77 0.00 0.00 4.35
5397 5807 1.415659 GCATGATACAGACTGAGGCCT 59.584 52.381 3.86 3.86 0.00 5.19
5398 5808 1.415659 AGCATGATACAGACTGAGGCC 59.584 52.381 10.08 0.00 0.00 5.19
5399 5809 2.906691 AGCATGATACAGACTGAGGC 57.093 50.000 10.08 0.00 0.00 4.70
5400 5810 7.615582 TTAAAAAGCATGATACAGACTGAGG 57.384 36.000 10.08 0.00 0.00 3.86
5401 5811 9.499585 CATTTAAAAAGCATGATACAGACTGAG 57.500 33.333 10.08 0.00 0.00 3.35
5402 5812 7.970061 GCATTTAAAAAGCATGATACAGACTGA 59.030 33.333 10.08 0.00 0.00 3.41
5403 5813 7.221452 GGCATTTAAAAAGCATGATACAGACTG 59.779 37.037 15.23 0.00 0.00 3.51
5407 5817 6.264832 TCGGCATTTAAAAAGCATGATACAG 58.735 36.000 15.23 0.84 0.00 2.74
5417 5827 5.261209 TCCCATGATCGGCATTTAAAAAG 57.739 39.130 0.00 0.00 34.15 2.27
5421 5831 3.625853 TGTTCCCATGATCGGCATTTAA 58.374 40.909 0.00 0.00 34.15 1.52
5422 5832 3.118075 TCTGTTCCCATGATCGGCATTTA 60.118 43.478 0.00 0.00 34.15 1.40
5425 5835 0.839277 TCTGTTCCCATGATCGGCAT 59.161 50.000 0.00 0.00 37.85 4.40
5427 5837 1.017387 GTTCTGTTCCCATGATCGGC 58.983 55.000 0.00 0.00 0.00 5.54
5428 5838 2.401583 TGTTCTGTTCCCATGATCGG 57.598 50.000 0.00 0.00 0.00 4.18
5429 5839 4.194640 AGAATGTTCTGTTCCCATGATCG 58.805 43.478 0.00 0.00 35.89 3.69
5437 5847 5.631992 GGAATTTCGAGAATGTTCTGTTCC 58.368 41.667 0.00 3.30 37.73 3.62
5443 5853 5.532025 AGTTCGGAATTTCGAGAATGTTC 57.468 39.130 9.17 0.00 40.42 3.18
5444 5854 5.941948 AAGTTCGGAATTTCGAGAATGTT 57.058 34.783 9.17 0.00 40.42 2.71
5445 5855 5.928153 GAAAGTTCGGAATTTCGAGAATGT 58.072 37.500 9.17 0.00 40.42 2.71
5474 5889 3.358111 TCAGTTATTTGGCCGGATTGA 57.642 42.857 5.05 0.00 0.00 2.57
5476 5891 5.186797 TGAAATTCAGTTATTTGGCCGGATT 59.813 36.000 5.05 0.00 0.00 3.01
5477 5892 4.709397 TGAAATTCAGTTATTTGGCCGGAT 59.291 37.500 5.05 0.00 0.00 4.18
5479 5894 4.448537 TGAAATTCAGTTATTTGGCCGG 57.551 40.909 0.00 0.00 0.00 6.13
5492 5907 3.057019 CGACGGTCTGAGTTGAAATTCA 58.943 45.455 6.57 0.00 0.00 2.57
5501 5916 1.315690 TTCAAGTCGACGGTCTGAGT 58.684 50.000 10.46 5.67 0.00 3.41
5502 5917 2.417339 TTTCAAGTCGACGGTCTGAG 57.583 50.000 10.46 0.00 0.00 3.35
5511 5926 3.087031 AGTAGGGTCGATTTCAAGTCGA 58.913 45.455 0.04 0.04 44.93 4.20
5513 5928 5.235516 TCAAAGTAGGGTCGATTTCAAGTC 58.764 41.667 0.00 0.00 0.00 3.01
5514 5929 5.223449 TCAAAGTAGGGTCGATTTCAAGT 57.777 39.130 0.00 0.00 0.00 3.16
5515 5930 5.874810 TGATCAAAGTAGGGTCGATTTCAAG 59.125 40.000 0.00 0.00 0.00 3.02
5516 5931 5.800296 TGATCAAAGTAGGGTCGATTTCAA 58.200 37.500 0.00 0.00 0.00 2.69
5517 5932 5.414789 TGATCAAAGTAGGGTCGATTTCA 57.585 39.130 0.00 0.00 0.00 2.69
5518 5933 4.271291 GCTGATCAAAGTAGGGTCGATTTC 59.729 45.833 0.00 0.00 0.00 2.17
5519 5934 4.080863 AGCTGATCAAAGTAGGGTCGATTT 60.081 41.667 0.00 0.00 0.00 2.17
5520 5935 3.452627 AGCTGATCAAAGTAGGGTCGATT 59.547 43.478 0.00 0.00 0.00 3.34
5521 5936 3.034635 AGCTGATCAAAGTAGGGTCGAT 58.965 45.455 0.00 0.00 0.00 3.59
5522 5937 2.427453 GAGCTGATCAAAGTAGGGTCGA 59.573 50.000 0.00 0.00 0.00 4.20
5524 5939 2.482142 CCGAGCTGATCAAAGTAGGGTC 60.482 54.545 0.00 0.00 0.00 4.46
5525 5940 1.482593 CCGAGCTGATCAAAGTAGGGT 59.517 52.381 0.00 0.00 0.00 4.34
5526 5941 1.808133 GCCGAGCTGATCAAAGTAGGG 60.808 57.143 0.00 0.00 0.00 3.53
5528 5943 1.203928 CGCCGAGCTGATCAAAGTAG 58.796 55.000 0.00 0.00 0.00 2.57
5559 5975 1.372499 GTTCTCAGCGTGCCGTGTA 60.372 57.895 0.00 0.00 0.00 2.90
5560 5976 2.661866 GTTCTCAGCGTGCCGTGT 60.662 61.111 0.00 0.00 0.00 4.49
5561 5977 2.486636 TAGGTTCTCAGCGTGCCGTG 62.487 60.000 0.00 0.00 0.00 4.94
5562 5978 2.273179 TAGGTTCTCAGCGTGCCGT 61.273 57.895 0.00 0.00 0.00 5.68
5563 5979 1.805945 GTAGGTTCTCAGCGTGCCG 60.806 63.158 0.00 0.00 0.00 5.69
5564 5980 0.320421 TTGTAGGTTCTCAGCGTGCC 60.320 55.000 0.00 0.00 0.00 5.01
5565 5981 1.194772 GTTTGTAGGTTCTCAGCGTGC 59.805 52.381 0.00 0.00 0.00 5.34
5566 5982 2.476619 CAGTTTGTAGGTTCTCAGCGTG 59.523 50.000 0.00 0.00 0.00 5.34
5567 5983 2.548067 CCAGTTTGTAGGTTCTCAGCGT 60.548 50.000 0.00 0.00 0.00 5.07
5568 5984 2.069273 CCAGTTTGTAGGTTCTCAGCG 58.931 52.381 0.00 0.00 0.00 5.18
5569 5985 2.427506 CCCAGTTTGTAGGTTCTCAGC 58.572 52.381 0.00 0.00 0.00 4.26
5582 5998 2.895424 CGCTCTCCACCCCCAGTTT 61.895 63.158 0.00 0.00 0.00 2.66
5586 6002 4.649705 TTCCGCTCTCCACCCCCA 62.650 66.667 0.00 0.00 0.00 4.96
5608 6024 3.402681 CTGTGATCTGGGCCCGGT 61.403 66.667 30.31 17.56 0.00 5.28
5616 6032 1.377725 GCCCCCACACTGTGATCTG 60.378 63.158 15.86 2.20 35.23 2.90
5617 6033 0.252696 TAGCCCCCACACTGTGATCT 60.253 55.000 15.86 4.63 35.23 2.75
5618 6034 0.839946 ATAGCCCCCACACTGTGATC 59.160 55.000 15.86 0.00 35.23 2.92
5619 6035 0.839946 GATAGCCCCCACACTGTGAT 59.160 55.000 15.86 0.00 35.23 3.06
5620 6036 0.252696 AGATAGCCCCCACACTGTGA 60.253 55.000 15.86 0.00 35.23 3.58
5621 6037 1.414181 CTAGATAGCCCCCACACTGTG 59.586 57.143 6.19 6.19 0.00 3.66
5622 6038 1.794714 CTAGATAGCCCCCACACTGT 58.205 55.000 0.00 0.00 0.00 3.55
5623 6039 0.394565 GCTAGATAGCCCCCACACTG 59.605 60.000 0.09 0.00 43.39 3.66
5624 6040 2.841595 GCTAGATAGCCCCCACACT 58.158 57.895 0.09 0.00 43.39 3.55
5635 6051 1.959985 GTGAGCTGCCTCTGCTAGATA 59.040 52.381 0.00 0.00 38.70 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.