Multiple sequence alignment - TraesCS7A01G432800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G432800 chr7A 100.000 6052 0 0 1 6052 626876226 626882277 0.000000e+00 11177.0
1 TraesCS7A01G432800 chr7A 97.959 49 1 0 5395 5443 626881571 626881619 1.080000e-12 86.1
2 TraesCS7A01G432800 chr7A 97.959 49 1 0 5346 5394 626881620 626881668 1.080000e-12 86.1
3 TraesCS7A01G432800 chr7B 92.043 2501 93 32 1899 4334 588376056 588378515 0.000000e+00 3419.0
4 TraesCS7A01G432800 chr7B 94.662 1049 39 7 830 1867 588374942 588375984 0.000000e+00 1611.0
5 TraesCS7A01G432800 chr7B 94.829 967 33 8 4428 5390 588378513 588379466 0.000000e+00 1493.0
6 TraesCS7A01G432800 chr7B 92.890 661 34 9 5395 6052 588379426 588380076 0.000000e+00 948.0
7 TraesCS7A01G432800 chr7D 94.178 1563 57 15 2793 4334 544991689 544993238 0.000000e+00 2351.0
8 TraesCS7A01G432800 chr7D 93.931 1071 37 7 821 1867 544989621 544990687 0.000000e+00 1592.0
9 TraesCS7A01G432800 chr7D 93.111 929 53 8 4447 5373 544993270 544994189 0.000000e+00 1351.0
10 TraesCS7A01G432800 chr7D 91.167 917 45 16 1899 2791 544990754 544991658 0.000000e+00 1212.0
11 TraesCS7A01G432800 chr7D 93.463 566 28 6 5395 5955 544994163 544994724 0.000000e+00 832.0
12 TraesCS7A01G432800 chr7D 91.233 365 26 5 1 363 544987019 544987379 5.450000e-135 492.0
13 TraesCS7A01G432800 chr7D 95.327 107 3 1 391 497 544988655 544988759 1.040000e-37 169.0
14 TraesCS7A01G432800 chr4A 92.476 319 24 0 495 813 613414527 613414209 1.990000e-124 457.0
15 TraesCS7A01G432800 chr4A 92.949 312 20 2 495 806 145327900 145328209 2.570000e-123 453.0
16 TraesCS7A01G432800 chr4A 92.628 312 22 1 495 806 76168531 76168841 1.200000e-121 448.0
17 TraesCS7A01G432800 chr2A 93.729 303 18 1 507 809 504225197 504225498 2.570000e-123 453.0
18 TraesCS7A01G432800 chr2A 91.509 318 26 1 495 812 57087065 57086749 2.590000e-118 436.0
19 TraesCS7A01G432800 chr2A 97.143 105 1 2 4329 4432 92494421 92494524 6.230000e-40 176.0
20 TraesCS7A01G432800 chr1A 92.453 318 23 1 495 812 189532860 189532544 2.570000e-123 453.0
21 TraesCS7A01G432800 chr1A 92.308 312 23 1 495 806 205391823 205392133 5.570000e-120 442.0
22 TraesCS7A01G432800 chr6A 91.824 318 25 1 495 812 523643090 523642774 5.570000e-120 442.0
23 TraesCS7A01G432800 chr6A 93.220 118 5 3 4317 4432 315625248 315625364 2.900000e-38 171.0
24 TraesCS7A01G432800 chr3A 92.308 312 23 1 495 806 338489990 338490300 5.570000e-120 442.0
25 TraesCS7A01G432800 chr3A 95.413 109 4 1 4325 4433 724949387 724949494 8.060000e-39 172.0
26 TraesCS7A01G432800 chr3B 96.364 110 3 1 4322 4431 5951438 5951330 4.820000e-41 180.0
27 TraesCS7A01G432800 chr3B 95.495 111 2 3 4321 4431 560117291 560117398 2.240000e-39 174.0
28 TraesCS7A01G432800 chr2B 95.536 112 2 3 4321 4431 695410842 695410951 6.230000e-40 176.0
29 TraesCS7A01G432800 chr2B 95.536 112 2 3 4321 4431 695437528 695437637 6.230000e-40 176.0
30 TraesCS7A01G432800 chr5B 94.595 111 5 1 4322 4432 180913420 180913311 2.900000e-38 171.0
31 TraesCS7A01G432800 chr4B 94.643 112 2 3 4321 4432 186741776 186741669 2.900000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G432800 chr7A 626876226 626882277 6051 False 3783.066667 11177 98.639333 1 6052 3 chr7A.!!$F1 6051
1 TraesCS7A01G432800 chr7B 588374942 588380076 5134 False 1867.750000 3419 93.606000 830 6052 4 chr7B.!!$F1 5222
2 TraesCS7A01G432800 chr7D 544987019 544994724 7705 False 1142.714286 2351 93.201429 1 5955 7 chr7D.!!$F1 5954

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.106967 GAGACAATGGGGAAGAGGGC 60.107 60.0 0.00 0.0 0.00 5.19 F
388 391 0.108138 GTAAGCAGACGCCTCCACAT 60.108 55.0 0.00 0.0 39.83 3.21 F
1548 3444 0.165944 CGGTGGTGAGTTGCGATTTC 59.834 55.0 0.00 0.0 0.00 2.17 F
1892 3845 0.039798 GTGTTGATGTGCTGTGCTGG 60.040 55.0 0.00 0.0 0.00 4.85 F
2018 3971 0.459489 TGCAGCTGGGTTGTTTTCAC 59.541 50.0 17.12 0.0 0.00 3.18 F
3718 5723 1.897560 ACTTGCCTTGTCTGTAAGCC 58.102 50.0 0.00 0.0 0.00 4.35 F
4751 6796 0.106769 TGCTTCAACAACCAGGCTGA 60.107 50.0 17.94 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1872 3825 0.949397 CAGCACAGCACATCAACACT 59.051 50.000 0.0 0.0 0.0 3.55 R
1875 3828 1.197721 GTACCAGCACAGCACATCAAC 59.802 52.381 0.0 0.0 0.0 3.18 R
3443 5448 2.343163 GATGGTCTCTCACTCCGCCG 62.343 65.000 0.0 0.0 0.0 6.46 R
3665 5670 3.181510 GCTGGTACATAAAACAGAAGGCG 60.182 47.826 0.0 0.0 38.2 5.52 R
3907 5912 4.202243 ACGTACACCTAACTAAGCAAACCA 60.202 41.667 0.0 0.0 0.0 3.67 R
4985 7030 1.204704 CAGACGAACCCTGTATCAGCA 59.795 52.381 0.0 0.0 0.0 4.41 R
5765 7814 0.323629 TCGGGTAGGCAAACTGAAGG 59.676 55.000 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 4.141688 GGGAGAACCTTCATAACTAGGGTG 60.142 50.000 0.00 0.00 35.79 4.61
77 78 6.158598 AGCACATCCATTCAAATACACAAAC 58.841 36.000 0.00 0.00 0.00 2.93
84 85 5.453903 CCATTCAAATACACAAACCCAACCA 60.454 40.000 0.00 0.00 0.00 3.67
96 97 5.181748 CAAACCCAACCAATCAAAACTTGA 58.818 37.500 0.00 0.00 45.01 3.02
127 128 3.508952 AGGATACCTCAAGGGAAGGAA 57.491 47.619 0.29 0.00 40.27 3.36
162 163 2.480073 CCATGAACAAATGCCACCGATC 60.480 50.000 0.00 0.00 0.00 3.69
187 188 6.426587 TGGAAGGATTTAAAGGAGGATTGAG 58.573 40.000 0.00 0.00 0.00 3.02
190 191 6.642733 AGGATTTAAAGGAGGATTGAGTGA 57.357 37.500 0.00 0.00 0.00 3.41
212 213 0.106967 GAGACAATGGGGAAGAGGGC 60.107 60.000 0.00 0.00 0.00 5.19
231 232 0.745845 CTTGAACTCGGGATGGCCAG 60.746 60.000 13.05 0.00 35.15 4.85
236 237 3.083349 TCGGGATGGCCAGTGAGG 61.083 66.667 13.05 0.00 41.84 3.86
241 242 1.274703 GGATGGCCAGTGAGGAGGAA 61.275 60.000 13.05 0.00 41.22 3.36
242 243 0.179936 GATGGCCAGTGAGGAGGAAG 59.820 60.000 13.05 0.00 41.22 3.46
243 244 1.277580 ATGGCCAGTGAGGAGGAAGG 61.278 60.000 13.05 0.00 41.22 3.46
244 245 1.613630 GGCCAGTGAGGAGGAAGGA 60.614 63.158 0.00 0.00 41.22 3.36
268 269 2.750350 GGTGAGTGGTCAGTGGGG 59.250 66.667 0.00 0.00 31.53 4.96
322 324 2.354188 GCAAAAACGCCACGGTCC 60.354 61.111 0.00 0.00 0.00 4.46
339 342 1.010125 CCTTGGCGTGTGTGAAACG 60.010 57.895 0.00 0.00 42.39 3.60
353 356 2.812542 GAAACGCCCGATGGTTTGGC 62.813 60.000 0.00 0.00 41.85 4.52
371 374 0.388907 GCGTTTCTAGCCACCACGTA 60.389 55.000 0.00 0.00 33.36 3.57
372 375 1.936203 GCGTTTCTAGCCACCACGTAA 60.936 52.381 0.00 0.00 33.36 3.18
374 377 1.730612 GTTTCTAGCCACCACGTAAGC 59.269 52.381 0.00 0.00 45.62 3.09
375 378 0.970640 TTCTAGCCACCACGTAAGCA 59.029 50.000 0.00 0.00 45.62 3.91
376 379 0.530744 TCTAGCCACCACGTAAGCAG 59.469 55.000 0.00 0.00 45.62 4.24
377 380 0.530744 CTAGCCACCACGTAAGCAGA 59.469 55.000 0.00 0.00 45.62 4.26
380 383 2.380410 CCACCACGTAAGCAGACGC 61.380 63.158 10.00 0.00 46.87 5.19
381 384 2.048503 ACCACGTAAGCAGACGCC 60.049 61.111 10.00 0.00 46.87 5.68
382 385 2.261671 CCACGTAAGCAGACGCCT 59.738 61.111 10.00 0.00 46.87 5.52
383 386 1.805945 CCACGTAAGCAGACGCCTC 60.806 63.158 10.00 0.00 46.87 4.70
384 387 1.805945 CACGTAAGCAGACGCCTCC 60.806 63.158 10.00 0.00 46.87 4.30
386 389 1.805945 CGTAAGCAGACGCCTCCAC 60.806 63.158 0.00 0.00 39.83 4.02
387 390 1.292223 GTAAGCAGACGCCTCCACA 59.708 57.895 0.00 0.00 39.83 4.17
388 391 0.108138 GTAAGCAGACGCCTCCACAT 60.108 55.000 0.00 0.00 39.83 3.21
478 1729 9.319143 CGTGAAATAATTTCTAAGAGAGGTCAT 57.681 33.333 0.00 0.00 40.32 3.06
504 1755 9.528489 TTTTTGGTACTAAAGATTTATGAGCCT 57.472 29.630 4.49 0.00 0.00 4.58
512 1763 9.700831 ACTAAAGATTTATGAGCCTATTTGGTT 57.299 29.630 0.00 0.00 38.35 3.67
514 1765 7.588497 AAGATTTATGAGCCTATTTGGTTCC 57.412 36.000 0.00 0.00 44.30 3.62
515 1766 6.672593 AGATTTATGAGCCTATTTGGTTCCA 58.327 36.000 0.00 0.00 44.30 3.53
516 1767 7.125391 AGATTTATGAGCCTATTTGGTTCCAA 58.875 34.615 0.00 0.00 44.30 3.53
517 1768 7.786464 AGATTTATGAGCCTATTTGGTTCCAAT 59.214 33.333 5.06 0.00 44.30 3.16
518 1769 9.077885 GATTTATGAGCCTATTTGGTTCCAATA 57.922 33.333 5.06 0.00 44.30 1.90
519 1770 8.830915 TTTATGAGCCTATTTGGTTCCAATAA 57.169 30.769 5.06 0.00 44.30 1.40
520 1771 6.966534 ATGAGCCTATTTGGTTCCAATAAG 57.033 37.500 5.06 6.04 44.30 1.73
521 1772 5.826643 TGAGCCTATTTGGTTCCAATAAGT 58.173 37.500 5.06 0.00 44.30 2.24
524 1775 5.652452 AGCCTATTTGGTTCCAATAAGTCAC 59.348 40.000 5.06 0.02 38.35 3.67
526 1777 6.187682 CCTATTTGGTTCCAATAAGTCACCT 58.812 40.000 5.06 0.00 0.00 4.00
528 1779 4.715534 TTGGTTCCAATAAGTCACCTGA 57.284 40.909 0.00 0.00 0.00 3.86
559 1810 6.229561 GTCAGGTGACTTAAAATCAGTGAC 57.770 41.667 0.00 12.02 41.65 3.67
562 1813 7.656137 GTCAGGTGACTTAAAATCAGTGACTTA 59.344 37.037 16.19 0.00 41.65 2.24
563 1814 8.375506 TCAGGTGACTTAAAATCAGTGACTTAT 58.624 33.333 0.00 0.00 40.21 1.73
564 1815 9.653287 CAGGTGACTTAAAATCAGTGACTTATA 57.347 33.333 0.00 0.00 40.21 0.98
581 1832 5.985911 ACTTATAAGTCACGCCTATTTGGT 58.014 37.500 12.50 0.00 32.86 3.67
582 1833 6.412214 ACTTATAAGTCACGCCTATTTGGTT 58.588 36.000 12.50 0.00 32.86 3.67
583 1834 6.315393 ACTTATAAGTCACGCCTATTTGGTTG 59.685 38.462 12.50 0.00 32.86 3.77
584 1835 2.561478 AGTCACGCCTATTTGGTTGT 57.439 45.000 0.00 0.00 38.35 3.32
587 1838 2.747446 GTCACGCCTATTTGGTTGTCAT 59.253 45.455 0.00 0.00 38.35 3.06
589 1840 3.009723 CACGCCTATTTGGTTGTCATCT 58.990 45.455 0.00 0.00 38.35 2.90
590 1841 4.081365 TCACGCCTATTTGGTTGTCATCTA 60.081 41.667 0.00 0.00 38.35 1.98
591 1842 4.634004 CACGCCTATTTGGTTGTCATCTAA 59.366 41.667 0.00 0.00 38.35 2.10
592 1843 4.634443 ACGCCTATTTGGTTGTCATCTAAC 59.366 41.667 0.00 0.00 38.35 2.34
593 1844 4.876107 CGCCTATTTGGTTGTCATCTAACT 59.124 41.667 0.00 0.00 38.35 2.24
594 1845 5.354234 CGCCTATTTGGTTGTCATCTAACTT 59.646 40.000 0.00 0.00 38.35 2.66
595 1846 6.537301 CGCCTATTTGGTTGTCATCTAACTTA 59.463 38.462 0.00 0.00 38.35 2.24
596 1847 7.226720 CGCCTATTTGGTTGTCATCTAACTTAT 59.773 37.037 0.00 0.00 38.35 1.73
597 1848 9.555727 GCCTATTTGGTTGTCATCTAACTTATA 57.444 33.333 0.00 0.00 38.35 0.98
603 1854 8.997621 TGGTTGTCATCTAACTTATAAGTCAC 57.002 34.615 18.28 8.99 38.57 3.67
605 1856 8.258708 GGTTGTCATCTAACTTATAAGTCACCT 58.741 37.037 18.28 5.74 38.57 4.00
607 1858 8.589701 TGTCATCTAACTTATAAGTCACCTGA 57.410 34.615 18.28 15.03 38.57 3.86
608 1859 8.467598 TGTCATCTAACTTATAAGTCACCTGAC 58.532 37.037 25.70 25.70 45.08 3.51
609 1860 7.921745 GTCATCTAACTTATAAGTCACCTGACC 59.078 40.741 24.00 14.80 45.85 4.02
610 1861 7.618117 TCATCTAACTTATAAGTCACCTGACCA 59.382 37.037 18.28 1.88 45.85 4.02
611 1862 7.166691 TCTAACTTATAAGTCACCTGACCAC 57.833 40.000 18.28 0.00 45.85 4.16
612 1863 5.818678 AACTTATAAGTCACCTGACCACA 57.181 39.130 18.28 0.00 45.85 4.17
613 1864 5.148651 ACTTATAAGTCACCTGACCACAC 57.851 43.478 12.50 0.00 45.85 3.82
614 1865 4.020485 ACTTATAAGTCACCTGACCACACC 60.020 45.833 12.50 0.00 45.85 4.16
615 1866 2.097110 TAAGTCACCTGACCACACCT 57.903 50.000 1.66 0.00 45.85 4.00
616 1867 1.213296 AAGTCACCTGACCACACCTT 58.787 50.000 1.66 0.00 45.85 3.50
618 1869 1.141053 AGTCACCTGACCACACCTTTC 59.859 52.381 1.66 0.00 45.85 2.62
619 1870 0.472471 TCACCTGACCACACCTTTCC 59.528 55.000 0.00 0.00 0.00 3.13
621 1872 0.182775 ACCTGACCACACCTTTCCAC 59.817 55.000 0.00 0.00 0.00 4.02
622 1873 0.537371 CCTGACCACACCTTTCCACC 60.537 60.000 0.00 0.00 0.00 4.61
623 1874 0.474184 CTGACCACACCTTTCCACCT 59.526 55.000 0.00 0.00 0.00 4.00
624 1875 0.923358 TGACCACACCTTTCCACCTT 59.077 50.000 0.00 0.00 0.00 3.50
625 1876 1.318576 GACCACACCTTTCCACCTTG 58.681 55.000 0.00 0.00 0.00 3.61
630 1881 3.055458 CCACACCTTTCCACCTTGTTTTT 60.055 43.478 0.00 0.00 0.00 1.94
650 1901 5.945466 TTTTAATGTAAAGGTGACGGGAC 57.055 39.130 0.00 0.00 0.00 4.46
652 1903 0.616891 ATGTAAAGGTGACGGGACCC 59.383 55.000 0.00 0.00 36.56 4.46
653 1904 0.763604 TGTAAAGGTGACGGGACCCA 60.764 55.000 12.15 0.00 36.56 4.51
654 1905 0.321034 GTAAAGGTGACGGGACCCAC 60.321 60.000 12.15 4.46 36.56 4.61
655 1906 1.818959 TAAAGGTGACGGGACCCACG 61.819 60.000 12.15 0.00 36.56 4.94
660 1911 0.249826 GTGACGGGACCCACGTAAAA 60.250 55.000 12.15 0.00 45.68 1.52
662 1913 0.671472 GACGGGACCCACGTAAAAGG 60.671 60.000 12.15 0.00 45.68 3.11
670 1921 0.399075 CCACGTAAAAGGGGGTGACT 59.601 55.000 0.00 0.00 32.23 3.41
673 1924 1.491754 ACGTAAAAGGGGGTGACTTGT 59.508 47.619 0.00 0.00 0.00 3.16
674 1925 2.705127 ACGTAAAAGGGGGTGACTTGTA 59.295 45.455 0.00 0.00 0.00 2.41
676 1927 4.136051 CGTAAAAGGGGGTGACTTGTAAA 58.864 43.478 0.00 0.00 0.00 2.01
677 1928 4.763279 CGTAAAAGGGGGTGACTTGTAAAT 59.237 41.667 0.00 0.00 0.00 1.40
678 1929 5.242171 CGTAAAAGGGGGTGACTTGTAAATT 59.758 40.000 0.00 0.00 0.00 1.82
679 1930 6.239092 CGTAAAAGGGGGTGACTTGTAAATTT 60.239 38.462 0.00 0.00 0.00 1.82
680 1931 6.569127 AAAAGGGGGTGACTTGTAAATTTT 57.431 33.333 0.00 0.00 0.00 1.82
681 1932 7.678207 AAAAGGGGGTGACTTGTAAATTTTA 57.322 32.000 0.00 0.00 0.00 1.52
682 1933 7.678207 AAAGGGGGTGACTTGTAAATTTTAA 57.322 32.000 0.00 0.00 0.00 1.52
683 1934 6.911250 AGGGGGTGACTTGTAAATTTTAAG 57.089 37.500 0.00 4.78 0.00 1.85
684 1935 6.378745 AGGGGGTGACTTGTAAATTTTAAGT 58.621 36.000 16.02 16.02 37.36 2.24
685 1936 6.842280 AGGGGGTGACTTGTAAATTTTAAGTT 59.158 34.615 16.74 6.10 34.99 2.66
686 1937 6.926826 GGGGGTGACTTGTAAATTTTAAGTTG 59.073 38.462 16.74 0.22 34.99 3.16
687 1938 6.926826 GGGGTGACTTGTAAATTTTAAGTTGG 59.073 38.462 16.74 0.00 34.99 3.77
688 1939 6.926826 GGGTGACTTGTAAATTTTAAGTTGGG 59.073 38.462 16.74 0.00 34.99 4.12
689 1940 6.926826 GGTGACTTGTAAATTTTAAGTTGGGG 59.073 38.462 16.74 0.00 34.99 4.96
690 1941 7.418139 GGTGACTTGTAAATTTTAAGTTGGGGT 60.418 37.037 16.74 0.82 34.99 4.95
691 1942 7.436970 GTGACTTGTAAATTTTAAGTTGGGGTG 59.563 37.037 16.74 0.00 34.99 4.61
692 1943 6.822442 ACTTGTAAATTTTAAGTTGGGGTGG 58.178 36.000 12.25 0.00 30.98 4.61
693 1944 6.612049 ACTTGTAAATTTTAAGTTGGGGTGGA 59.388 34.615 12.25 0.00 30.98 4.02
694 1945 6.658188 TGTAAATTTTAAGTTGGGGTGGAG 57.342 37.500 0.00 0.00 0.00 3.86
695 1946 4.617253 AAATTTTAAGTTGGGGTGGAGC 57.383 40.909 0.00 0.00 0.00 4.70
696 1947 1.611519 TTTTAAGTTGGGGTGGAGCG 58.388 50.000 0.00 0.00 0.00 5.03
697 1948 0.766131 TTTAAGTTGGGGTGGAGCGA 59.234 50.000 0.00 0.00 0.00 4.93
698 1949 0.323629 TTAAGTTGGGGTGGAGCGAG 59.676 55.000 0.00 0.00 0.00 5.03
699 1950 0.834687 TAAGTTGGGGTGGAGCGAGT 60.835 55.000 0.00 0.00 0.00 4.18
700 1951 1.705997 AAGTTGGGGTGGAGCGAGTT 61.706 55.000 0.00 0.00 0.00 3.01
701 1952 0.834687 AGTTGGGGTGGAGCGAGTTA 60.835 55.000 0.00 0.00 0.00 2.24
702 1953 0.252197 GTTGGGGTGGAGCGAGTTAT 59.748 55.000 0.00 0.00 0.00 1.89
703 1954 0.251916 TTGGGGTGGAGCGAGTTATG 59.748 55.000 0.00 0.00 0.00 1.90
704 1955 0.616395 TGGGGTGGAGCGAGTTATGA 60.616 55.000 0.00 0.00 0.00 2.15
705 1956 0.179081 GGGGTGGAGCGAGTTATGAC 60.179 60.000 0.00 0.00 0.00 3.06
706 1957 0.824759 GGGTGGAGCGAGTTATGACT 59.175 55.000 0.00 0.00 39.32 3.41
707 1958 1.207329 GGGTGGAGCGAGTTATGACTT 59.793 52.381 0.00 0.00 35.88 3.01
708 1959 2.429610 GGGTGGAGCGAGTTATGACTTA 59.570 50.000 0.00 0.00 35.88 2.24
709 1960 3.069729 GGGTGGAGCGAGTTATGACTTAT 59.930 47.826 0.00 0.00 35.88 1.73
710 1961 4.280174 GGGTGGAGCGAGTTATGACTTATA 59.720 45.833 0.00 0.00 35.88 0.98
711 1962 5.221382 GGGTGGAGCGAGTTATGACTTATAA 60.221 44.000 0.00 0.00 35.88 0.98
712 1963 5.921408 GGTGGAGCGAGTTATGACTTATAAG 59.079 44.000 11.05 11.05 35.88 1.73
713 1964 6.461231 GGTGGAGCGAGTTATGACTTATAAGT 60.461 42.308 18.05 18.05 43.16 2.24
714 1965 6.979238 GTGGAGCGAGTTATGACTTATAAGTT 59.021 38.462 18.96 7.26 39.88 2.66
715 1966 8.133627 GTGGAGCGAGTTATGACTTATAAGTTA 58.866 37.037 18.96 15.42 39.88 2.24
716 1967 8.350722 TGGAGCGAGTTATGACTTATAAGTTAG 58.649 37.037 18.96 4.36 39.88 2.34
717 1968 7.808856 GGAGCGAGTTATGACTTATAAGTTAGG 59.191 40.741 18.96 5.17 39.88 2.69
718 1969 7.659186 AGCGAGTTATGACTTATAAGTTAGGG 58.341 38.462 18.96 5.60 39.88 3.53
719 1970 7.287235 AGCGAGTTATGACTTATAAGTTAGGGT 59.713 37.037 18.96 3.72 39.88 4.34
720 1971 7.381678 GCGAGTTATGACTTATAAGTTAGGGTG 59.618 40.741 18.96 7.27 39.88 4.61
721 1972 8.627403 CGAGTTATGACTTATAAGTTAGGGTGA 58.373 37.037 18.96 0.00 39.88 4.02
722 1973 9.747293 GAGTTATGACTTATAAGTTAGGGTGAC 57.253 37.037 18.96 7.69 39.88 3.67
723 1974 9.490083 AGTTATGACTTATAAGTTAGGGTGACT 57.510 33.333 18.96 9.59 39.88 3.41
733 1984 6.954487 AAGTTAGGGTGACTTAAAAGTTGG 57.046 37.500 0.00 0.00 39.88 3.77
734 1985 5.382616 AGTTAGGGTGACTTAAAAGTTGGG 58.617 41.667 0.00 0.00 39.88 4.12
735 1986 3.965470 AGGGTGACTTAAAAGTTGGGT 57.035 42.857 0.00 0.00 39.88 4.51
736 1987 3.828921 AGGGTGACTTAAAAGTTGGGTC 58.171 45.455 0.00 0.00 39.88 4.46
737 1988 3.462205 AGGGTGACTTAAAAGTTGGGTCT 59.538 43.478 0.00 0.00 39.88 3.85
738 1989 3.568430 GGGTGACTTAAAAGTTGGGTCTG 59.432 47.826 0.00 0.00 39.88 3.51
739 1990 4.204799 GGTGACTTAAAAGTTGGGTCTGT 58.795 43.478 0.00 0.00 39.88 3.41
740 1991 4.643334 GGTGACTTAAAAGTTGGGTCTGTT 59.357 41.667 0.00 0.00 39.88 3.16
741 1992 5.126545 GGTGACTTAAAAGTTGGGTCTGTTT 59.873 40.000 0.00 0.00 39.88 2.83
742 1993 6.033966 GTGACTTAAAAGTTGGGTCTGTTTG 58.966 40.000 0.00 0.00 39.88 2.93
743 1994 5.946972 TGACTTAAAAGTTGGGTCTGTTTGA 59.053 36.000 0.00 0.00 39.88 2.69
744 1995 6.127842 TGACTTAAAAGTTGGGTCTGTTTGAC 60.128 38.462 0.00 0.00 41.15 3.18
745 1996 5.712917 ACTTAAAAGTTGGGTCTGTTTGACA 59.287 36.000 0.00 0.00 40.94 3.58
746 1997 6.209788 ACTTAAAAGTTGGGTCTGTTTGACAA 59.790 34.615 0.00 0.00 40.94 3.18
747 1998 7.256012 ACTTAAAAGTTGGGTCTGTTTGACAAA 60.256 33.333 0.00 0.00 40.94 2.83
804 2055 8.871686 AGTTGATGACTTATTTGAAACCAAAC 57.128 30.769 0.00 0.00 34.13 2.93
805 2056 8.474025 AGTTGATGACTTATTTGAAACCAAACA 58.526 29.630 0.00 0.00 34.13 2.83
806 2057 9.260002 GTTGATGACTTATTTGAAACCAAACAT 57.740 29.630 0.00 0.00 36.48 2.71
807 2058 8.815141 TGATGACTTATTTGAAACCAAACATG 57.185 30.769 0.00 0.00 36.48 3.21
810 2061 7.206687 TGACTTATTTGAAACCAAACATGGTC 58.793 34.615 0.20 0.00 42.20 4.02
811 2062 7.069331 TGACTTATTTGAAACCAAACATGGTCT 59.931 33.333 0.20 0.00 42.20 3.85
819 2070 8.746052 TGAAACCAAACATGGTCTATATAAGG 57.254 34.615 0.20 0.00 42.20 2.69
822 2694 7.446106 ACCAAACATGGTCTATATAAGGTCA 57.554 36.000 0.00 0.00 37.74 4.02
838 2710 5.904362 AAGGTCATAAGAGTGATTTTGGC 57.096 39.130 0.00 0.00 0.00 4.52
887 2759 2.262915 GCTCCACCTCACCACGAG 59.737 66.667 0.00 0.00 41.89 4.18
891 2763 3.991051 CACCTCACCACGAGCGGT 61.991 66.667 0.00 0.00 40.78 5.68
962 2834 2.283676 TTCCTCCTCCGAAGCCGT 60.284 61.111 0.00 0.00 0.00 5.68
1345 3233 0.388649 GTCGAGACCAGCAACGTGAT 60.389 55.000 0.00 0.00 0.00 3.06
1346 3234 0.317160 TCGAGACCAGCAACGTGATT 59.683 50.000 0.00 0.00 0.00 2.57
1520 3416 3.000819 ACGGCACCGGGAAGATCA 61.001 61.111 14.51 0.00 44.69 2.92
1548 3444 0.165944 CGGTGGTGAGTTGCGATTTC 59.834 55.000 0.00 0.00 0.00 2.17
1551 3447 2.293399 GGTGGTGAGTTGCGATTTCTTT 59.707 45.455 0.00 0.00 0.00 2.52
1629 3527 5.048991 GTGTGGTTGACGATTTTCTGGTATT 60.049 40.000 0.00 0.00 0.00 1.89
1720 3619 8.186821 GCTCTGATATGTGTTCAATTTTAGCTT 58.813 33.333 0.00 0.00 0.00 3.74
1721 3620 9.499585 CTCTGATATGTGTTCAATTTTAGCTTG 57.500 33.333 0.00 0.00 0.00 4.01
1859 3758 3.011119 CTCGATCTATCCGGTAAGGGAG 58.989 54.545 0.00 5.00 40.02 4.30
1872 3825 3.458487 GGTAAGGGAGCTGGATTCCTTTA 59.542 47.826 3.62 0.00 39.90 1.85
1875 3828 2.507471 AGGGAGCTGGATTCCTTTAGTG 59.493 50.000 3.95 0.00 35.01 2.74
1884 3837 4.458989 TGGATTCCTTTAGTGTTGATGTGC 59.541 41.667 3.95 0.00 0.00 4.57
1885 3838 4.702131 GGATTCCTTTAGTGTTGATGTGCT 59.298 41.667 0.00 0.00 0.00 4.40
1886 3839 5.392380 GGATTCCTTTAGTGTTGATGTGCTG 60.392 44.000 0.00 0.00 0.00 4.41
1887 3840 4.085357 TCCTTTAGTGTTGATGTGCTGT 57.915 40.909 0.00 0.00 0.00 4.40
1888 3841 3.814842 TCCTTTAGTGTTGATGTGCTGTG 59.185 43.478 0.00 0.00 0.00 3.66
1889 3842 3.558505 CTTTAGTGTTGATGTGCTGTGC 58.441 45.455 0.00 0.00 0.00 4.57
1890 3843 2.549064 TAGTGTTGATGTGCTGTGCT 57.451 45.000 0.00 0.00 0.00 4.40
1891 3844 0.949397 AGTGTTGATGTGCTGTGCTG 59.051 50.000 0.00 0.00 0.00 4.41
1892 3845 0.039798 GTGTTGATGTGCTGTGCTGG 60.040 55.000 0.00 0.00 0.00 4.85
1893 3846 0.466007 TGTTGATGTGCTGTGCTGGT 60.466 50.000 0.00 0.00 0.00 4.00
1894 3847 1.202746 TGTTGATGTGCTGTGCTGGTA 60.203 47.619 0.00 0.00 0.00 3.25
1895 3848 1.197721 GTTGATGTGCTGTGCTGGTAC 59.802 52.381 0.00 0.00 0.00 3.34
1896 3849 0.686789 TGATGTGCTGTGCTGGTACT 59.313 50.000 0.00 0.00 0.00 2.73
1897 3850 1.338105 TGATGTGCTGTGCTGGTACTC 60.338 52.381 0.00 0.00 0.00 2.59
1913 3866 7.042335 GCTGGTACTCATCTATTTGTTGTACT 58.958 38.462 0.00 0.00 33.09 2.73
1915 3868 9.737427 CTGGTACTCATCTATTTGTTGTACTAG 57.263 37.037 0.00 0.00 34.24 2.57
1916 3869 9.470399 TGGTACTCATCTATTTGTTGTACTAGA 57.530 33.333 0.00 0.00 33.09 2.43
1943 3896 4.631377 GCTTTTGGTTGCTTCAGTTTTCTT 59.369 37.500 0.00 0.00 0.00 2.52
1951 3904 5.869753 TGCTTCAGTTTTCTTATCTGAGC 57.130 39.130 0.00 0.00 39.00 4.26
2007 3960 9.807649 AGTATTAAAATTAAAATCTGCAGCTGG 57.192 29.630 17.12 0.00 0.00 4.85
2018 3971 0.459489 TGCAGCTGGGTTGTTTTCAC 59.541 50.000 17.12 0.00 0.00 3.18
2042 3995 3.071479 TGCGATTCACTGGAACTTAACC 58.929 45.455 0.00 0.00 35.46 2.85
2047 4000 5.238650 CGATTCACTGGAACTTAACCTTTGT 59.761 40.000 0.00 0.00 35.46 2.83
2048 4001 6.238648 CGATTCACTGGAACTTAACCTTTGTT 60.239 38.462 0.00 0.00 35.46 2.83
2050 4003 6.202516 TCACTGGAACTTAACCTTTGTTTG 57.797 37.500 0.00 0.00 35.87 2.93
2059 4012 6.760291 ACTTAACCTTTGTTTGGTTGTTCAA 58.240 32.000 8.25 0.00 46.14 2.69
2061 4014 7.715686 ACTTAACCTTTGTTTGGTTGTTCAAAA 59.284 29.630 8.25 0.00 46.14 2.44
2062 4015 8.622948 TTAACCTTTGTTTGGTTGTTCAAAAT 57.377 26.923 8.25 0.00 46.14 1.82
2063 4016 7.517614 AACCTTTGTTTGGTTGTTCAAAATT 57.482 28.000 0.00 0.00 45.10 1.82
2064 4017 6.907741 ACCTTTGTTTGGTTGTTCAAAATTG 58.092 32.000 0.00 0.00 38.21 2.32
2081 4034 5.581126 AAATTGTGCTCTTGTTGTCTTCA 57.419 34.783 0.00 0.00 0.00 3.02
2175 4128 9.851686 TGGATGATATACTTAAATGCAGTTCTT 57.148 29.630 1.02 0.00 0.00 2.52
2189 4142 3.699067 CAGTTCTTGCAGAGGTTTTGTG 58.301 45.455 0.00 0.00 0.00 3.33
2190 4143 3.378112 CAGTTCTTGCAGAGGTTTTGTGA 59.622 43.478 0.00 0.00 0.00 3.58
2202 4161 7.246311 CAGAGGTTTTGTGACTATAGCATTTG 58.754 38.462 0.00 0.00 0.00 2.32
2277 4236 4.383010 GCCAATTAAACATCCTTTGAGGGG 60.383 45.833 0.00 0.00 35.59 4.79
2285 4244 3.181418 ACATCCTTTGAGGGGAAATGTGT 60.181 43.478 0.00 0.00 35.59 3.72
2296 4255 3.458189 GGGAAATGTGTGAGATACCGAG 58.542 50.000 0.00 0.00 0.00 4.63
2316 4275 5.396436 CCGAGGATAAAGGTTTACATCCTGT 60.396 44.000 10.32 0.00 34.12 4.00
2318 4277 5.193679 AGGATAAAGGTTTACATCCTGTGC 58.806 41.667 6.12 0.00 33.22 4.57
2321 4280 6.152831 GGATAAAGGTTTACATCCTGTGCTTT 59.847 38.462 0.00 0.00 35.27 3.51
2326 4285 6.775708 AGGTTTACATCCTGTGCTTTACTTA 58.224 36.000 0.00 0.00 33.62 2.24
2426 4386 6.278363 TGTGTCAGTTTGTTCTAACTAGGTC 58.722 40.000 0.00 0.00 36.24 3.85
2470 4430 8.859090 TGGATGACTTTGTTTGAAAGTATCATT 58.141 29.630 0.00 0.00 40.27 2.57
2472 4432 9.683069 GATGACTTTGTTTGAAAGTATCATTGT 57.317 29.630 0.00 0.00 40.27 2.71
2495 4464 4.625972 AAGTTACCGTTGTTTGTGGAAG 57.374 40.909 0.00 0.00 0.00 3.46
2567 4536 3.448093 TGGCTAACATGTCCATGGAAA 57.552 42.857 18.20 12.73 42.91 3.13
2606 4575 4.985538 AGGTTCACCAGTCATGTTATGTT 58.014 39.130 0.00 0.00 38.89 2.71
2607 4576 6.121776 AGGTTCACCAGTCATGTTATGTTA 57.878 37.500 0.00 0.00 38.89 2.41
2610 4579 6.183360 GGTTCACCAGTCATGTTATGTTATGG 60.183 42.308 0.00 0.00 35.69 2.74
2742 4718 6.283694 TGCAATCTGAACTACTGGACATATC 58.716 40.000 0.00 0.00 0.00 1.63
2791 4767 3.146104 ACTTGATACCTGCTTTGCTGT 57.854 42.857 0.00 0.00 0.00 4.40
2846 4851 3.753272 CCCCATGAAGTAACTGTTCTGTG 59.247 47.826 0.00 0.00 0.00 3.66
2869 4874 7.092716 GTGGACAGCTCATGATTGTAATTTTT 58.907 34.615 11.66 0.00 0.00 1.94
2929 4934 6.627087 TTTCTGTTCTGGGAGATCTTATGT 57.373 37.500 0.00 0.00 0.00 2.29
3133 5138 9.653287 TCAGTCAGTGTTCTAGTATTAATTTGG 57.347 33.333 0.00 0.00 0.00 3.28
3161 5166 7.799081 TGAGAGACACCATTAATGATCATTCT 58.201 34.615 23.95 12.56 32.50 2.40
3162 5167 7.713942 TGAGAGACACCATTAATGATCATTCTG 59.286 37.037 23.95 20.26 32.50 3.02
3168 5173 6.914215 CACCATTAATGATCATTCTGTTTCCG 59.086 38.462 23.95 11.65 32.50 4.30
3243 5248 3.010027 TCATGTGCCTTATTCTGGTGGAA 59.990 43.478 0.00 0.00 38.41 3.53
3443 5448 4.407296 ACATCTACTCATGGTCCTTTCTCC 59.593 45.833 0.00 0.00 0.00 3.71
3542 5547 8.421249 TTCAGTTTCATGAATTCCTTGGTAAT 57.579 30.769 9.40 0.00 34.31 1.89
3545 5550 6.155049 AGTTTCATGAATTCCTTGGTAATGGG 59.845 38.462 9.40 0.00 0.00 4.00
3564 5569 5.002464 TGGGAAAGCGTACTTGTCTATAC 57.998 43.478 0.00 0.00 35.85 1.47
3665 5670 5.725362 TCTTCTGTAGCCTCTTTCTTTAGC 58.275 41.667 0.00 0.00 0.00 3.09
3718 5723 1.897560 ACTTGCCTTGTCTGTAAGCC 58.102 50.000 0.00 0.00 0.00 4.35
3730 5735 4.833380 TGTCTGTAAGCCTCTTAACTGACT 59.167 41.667 11.05 0.00 39.86 3.41
3731 5736 5.164954 GTCTGTAAGCCTCTTAACTGACTG 58.835 45.833 0.00 0.00 37.64 3.51
3859 5864 6.706270 TGTAAGTTTAGTTTCTCTGCCAGAAG 59.294 38.462 0.00 0.00 42.37 2.85
3907 5912 6.769512 TGGAACTCTTAGCTTCTGTTGTAAT 58.230 36.000 0.00 0.00 0.00 1.89
4063 6068 5.183140 AGAATTGACCTTTTCATGGTAACGG 59.817 40.000 0.00 0.00 38.03 4.44
4073 6078 2.774809 TCATGGTAACGGGGAATGATCA 59.225 45.455 0.00 0.00 42.51 2.92
4074 6079 3.141398 CATGGTAACGGGGAATGATCAG 58.859 50.000 0.09 0.00 42.51 2.90
4075 6080 2.473070 TGGTAACGGGGAATGATCAGA 58.527 47.619 0.09 0.00 42.51 3.27
4081 6086 2.840651 ACGGGGAATGATCAGAAAGAGT 59.159 45.455 0.09 0.00 0.00 3.24
4083 6088 4.469945 ACGGGGAATGATCAGAAAGAGTAA 59.530 41.667 0.09 0.00 0.00 2.24
4238 6263 7.874940 ACACAAATATATCATGGAATGGTTCG 58.125 34.615 0.00 0.00 46.73 3.95
4259 6284 6.405278 TCGAAACTCCTAATCATGCATAGA 57.595 37.500 0.00 0.00 0.00 1.98
4280 6305 9.209175 CATAGAAAAACAAGAGTGCTTACTACT 57.791 33.333 0.00 0.00 31.81 2.57
4339 6364 8.474710 ACGTTCATTATTACTATGTACTCCCT 57.525 34.615 0.00 0.00 0.00 4.20
4340 6365 8.574737 ACGTTCATTATTACTATGTACTCCCTC 58.425 37.037 0.00 0.00 0.00 4.30
4341 6366 8.027771 CGTTCATTATTACTATGTACTCCCTCC 58.972 40.741 0.00 0.00 0.00 4.30
4342 6367 7.698506 TCATTATTACTATGTACTCCCTCCG 57.301 40.000 0.00 0.00 0.00 4.63
4343 6368 7.464273 TCATTATTACTATGTACTCCCTCCGA 58.536 38.462 0.00 0.00 0.00 4.55
4344 6369 8.114102 TCATTATTACTATGTACTCCCTCCGAT 58.886 37.037 0.00 0.00 0.00 4.18
4345 6370 7.934855 TTATTACTATGTACTCCCTCCGATC 57.065 40.000 0.00 0.00 0.00 3.69
4346 6371 3.157750 ACTATGTACTCCCTCCGATCC 57.842 52.381 0.00 0.00 0.00 3.36
4347 6372 2.225066 ACTATGTACTCCCTCCGATCCC 60.225 54.545 0.00 0.00 0.00 3.85
4348 6373 0.561184 ATGTACTCCCTCCGATCCCA 59.439 55.000 0.00 0.00 0.00 4.37
4349 6374 0.337082 TGTACTCCCTCCGATCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
4350 6375 1.273381 TGTACTCCCTCCGATCCCAAA 60.273 52.381 0.00 0.00 0.00 3.28
4351 6376 1.835531 GTACTCCCTCCGATCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
4352 6377 1.596496 ACTCCCTCCGATCCCAAAAT 58.404 50.000 0.00 0.00 0.00 1.82
4353 6378 2.771688 ACTCCCTCCGATCCCAAAATA 58.228 47.619 0.00 0.00 0.00 1.40
4354 6379 3.120108 ACTCCCTCCGATCCCAAAATAA 58.880 45.455 0.00 0.00 0.00 1.40
4355 6380 3.136626 ACTCCCTCCGATCCCAAAATAAG 59.863 47.826 0.00 0.00 0.00 1.73
4356 6381 3.120108 TCCCTCCGATCCCAAAATAAGT 58.880 45.455 0.00 0.00 0.00 2.24
4357 6382 3.118038 TCCCTCCGATCCCAAAATAAGTG 60.118 47.826 0.00 0.00 0.00 3.16
4358 6383 3.371595 CCCTCCGATCCCAAAATAAGTGT 60.372 47.826 0.00 0.00 0.00 3.55
4359 6384 3.877508 CCTCCGATCCCAAAATAAGTGTC 59.122 47.826 0.00 0.00 0.00 3.67
4360 6385 4.384208 CCTCCGATCCCAAAATAAGTGTCT 60.384 45.833 0.00 0.00 0.00 3.41
4361 6386 4.766375 TCCGATCCCAAAATAAGTGTCTC 58.234 43.478 0.00 0.00 0.00 3.36
4362 6387 4.224147 TCCGATCCCAAAATAAGTGTCTCA 59.776 41.667 0.00 0.00 0.00 3.27
4363 6388 4.941263 CCGATCCCAAAATAAGTGTCTCAA 59.059 41.667 0.00 0.00 0.00 3.02
4364 6389 5.163754 CCGATCCCAAAATAAGTGTCTCAAC 60.164 44.000 0.00 0.00 0.00 3.18
4365 6390 5.643777 CGATCCCAAAATAAGTGTCTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
4366 6391 6.149474 CGATCCCAAAATAAGTGTCTCAACTT 59.851 38.462 0.00 0.00 42.89 2.66
4367 6392 7.308589 CGATCCCAAAATAAGTGTCTCAACTTT 60.309 37.037 0.00 0.00 40.77 2.66
4368 6393 7.038154 TCCCAAAATAAGTGTCTCAACTTTG 57.962 36.000 0.00 0.00 40.77 2.77
4369 6394 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4370 6395 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4371 6396 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4372 6397 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4375 6400 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
4376 6401 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
4377 6402 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
4378 6403 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
4379 6404 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
4380 6405 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
4382 6407 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
4408 6433 9.726438 ACAAATTTATACTAAGCTCAAGACACT 57.274 29.630 3.19 0.00 0.00 3.55
4416 6441 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
4417 6442 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
4418 6443 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
4419 6444 4.762251 AGCTCAAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
4420 6445 4.378459 GCTCAAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
4421 6446 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
4422 6447 4.069304 CAAGACACTTATTTTGGGACGGA 58.931 43.478 0.00 0.00 0.00 4.69
4423 6448 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
4424 6449 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4425 6450 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4426 6451 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4546 6587 2.245159 TCAAGTGACAGGTTGAGCTG 57.755 50.000 8.54 8.54 0.00 4.24
4751 6796 0.106769 TGCTTCAACAACCAGGCTGA 60.107 50.000 17.94 0.00 0.00 4.26
4903 6948 9.436957 CAAACATCATGTACTACCTCTAACTTT 57.563 33.333 0.00 0.00 0.00 2.66
4973 7018 3.525800 ATTTTGCTGTACAGGGAGGTT 57.474 42.857 23.95 0.00 0.00 3.50
4985 7030 6.499350 TGTACAGGGAGGTTATCAACTTACTT 59.501 38.462 0.00 0.00 0.00 2.24
5112 7157 7.124298 TGTGAGATCAGTTTGGCTATAGTTACT 59.876 37.037 0.84 0.00 0.00 2.24
5113 7158 8.630917 GTGAGATCAGTTTGGCTATAGTTACTA 58.369 37.037 0.84 0.00 0.00 1.82
5114 7159 8.630917 TGAGATCAGTTTGGCTATAGTTACTAC 58.369 37.037 0.84 0.00 0.00 2.73
5276 7322 7.118390 GCTGTTTTACTGGGATATACTATGCAG 59.882 40.741 0.00 0.00 0.00 4.41
5294 7340 3.058085 TGCAGTATGTTCATGCTTGTGTG 60.058 43.478 0.92 0.00 40.62 3.82
5309 7355 4.722194 CTTGTGTGCTTGCGTTATGTTAT 58.278 39.130 0.00 0.00 0.00 1.89
5352 7398 5.426689 TTTCCTGCTTATGTGACTGATCT 57.573 39.130 0.00 0.00 0.00 2.75
5373 7419 8.478877 TGATCTTATCCTTCTGTTTACCTCTTC 58.521 37.037 0.00 0.00 0.00 2.87
5375 7421 8.437274 TCTTATCCTTCTGTTTACCTCTTCTT 57.563 34.615 0.00 0.00 0.00 2.52
5376 7422 8.881262 TCTTATCCTTCTGTTTACCTCTTCTTT 58.119 33.333 0.00 0.00 0.00 2.52
5379 7425 6.465084 TCCTTCTGTTTACCTCTTCTTTAGC 58.535 40.000 0.00 0.00 0.00 3.09
5380 7426 5.644206 CCTTCTGTTTACCTCTTCTTTAGCC 59.356 44.000 0.00 0.00 0.00 3.93
5382 7428 6.038997 TCTGTTTACCTCTTCTTTAGCCTC 57.961 41.667 0.00 0.00 0.00 4.70
5383 7429 5.780793 TCTGTTTACCTCTTCTTTAGCCTCT 59.219 40.000 0.00 0.00 0.00 3.69
5384 7430 5.794894 TGTTTACCTCTTCTTTAGCCTCTG 58.205 41.667 0.00 0.00 0.00 3.35
5385 7431 4.473477 TTACCTCTTCTTTAGCCTCTGC 57.527 45.455 0.00 0.00 37.95 4.26
5396 7442 3.027419 GCCTCTGCTGTTTCCAACT 57.973 52.632 0.00 0.00 33.53 3.16
5397 7443 0.595095 GCCTCTGCTGTTTCCAACTG 59.405 55.000 0.00 0.00 33.53 3.16
5398 7444 1.815408 GCCTCTGCTGTTTCCAACTGA 60.815 52.381 0.00 0.00 32.71 3.41
5399 7445 2.787994 CCTCTGCTGTTTCCAACTGAT 58.212 47.619 0.00 0.00 32.71 2.90
5400 7446 3.152341 CCTCTGCTGTTTCCAACTGATT 58.848 45.455 0.00 0.00 32.71 2.57
5401 7447 3.571401 CCTCTGCTGTTTCCAACTGATTT 59.429 43.478 0.00 0.00 32.71 2.17
5402 7448 4.038402 CCTCTGCTGTTTCCAACTGATTTT 59.962 41.667 0.00 0.00 32.71 1.82
5403 7449 5.241506 CCTCTGCTGTTTCCAACTGATTTTA 59.758 40.000 0.00 0.00 32.71 1.52
5404 7450 6.071728 CCTCTGCTGTTTCCAACTGATTTTAT 60.072 38.462 0.00 0.00 32.71 1.40
5405 7451 6.913170 TCTGCTGTTTCCAACTGATTTTATC 58.087 36.000 0.00 0.00 32.71 1.75
5406 7452 6.024552 TGCTGTTTCCAACTGATTTTATCC 57.975 37.500 0.00 0.00 32.71 2.59
5407 7453 5.774690 TGCTGTTTCCAACTGATTTTATCCT 59.225 36.000 0.00 0.00 32.71 3.24
5408 7454 6.267471 TGCTGTTTCCAACTGATTTTATCCTT 59.733 34.615 0.00 0.00 32.71 3.36
5409 7455 6.808704 GCTGTTTCCAACTGATTTTATCCTTC 59.191 38.462 0.00 0.00 32.71 3.46
5410 7456 7.309438 GCTGTTTCCAACTGATTTTATCCTTCT 60.309 37.037 0.00 0.00 32.71 2.85
5411 7457 7.885297 TGTTTCCAACTGATTTTATCCTTCTG 58.115 34.615 0.00 0.00 0.00 3.02
5412 7458 7.505585 TGTTTCCAACTGATTTTATCCTTCTGT 59.494 33.333 0.00 0.00 0.00 3.41
5413 7459 8.360390 GTTTCCAACTGATTTTATCCTTCTGTT 58.640 33.333 0.00 0.00 33.51 3.16
5414 7460 8.477419 TTCCAACTGATTTTATCCTTCTGTTT 57.523 30.769 0.00 0.00 31.69 2.83
5415 7461 9.581289 TTCCAACTGATTTTATCCTTCTGTTTA 57.419 29.630 0.00 0.00 31.69 2.01
5416 7462 9.010029 TCCAACTGATTTTATCCTTCTGTTTAC 57.990 33.333 0.00 0.00 31.69 2.01
5417 7463 8.244113 CCAACTGATTTTATCCTTCTGTTTACC 58.756 37.037 0.00 0.00 31.69 2.85
5418 7464 9.014297 CAACTGATTTTATCCTTCTGTTTACCT 57.986 33.333 0.00 0.00 31.69 3.08
5419 7465 8.794335 ACTGATTTTATCCTTCTGTTTACCTC 57.206 34.615 0.00 0.00 0.00 3.85
5420 7466 8.606830 ACTGATTTTATCCTTCTGTTTACCTCT 58.393 33.333 0.00 0.00 0.00 3.69
5421 7467 9.454859 CTGATTTTATCCTTCTGTTTACCTCTT 57.545 33.333 0.00 0.00 0.00 2.85
5422 7468 9.449719 TGATTTTATCCTTCTGTTTACCTCTTC 57.550 33.333 0.00 0.00 0.00 2.87
5423 7469 9.674068 GATTTTATCCTTCTGTTTACCTCTTCT 57.326 33.333 0.00 0.00 0.00 2.85
5425 7471 9.862149 TTTTATCCTTCTGTTTACCTCTTCTTT 57.138 29.630 0.00 0.00 0.00 2.52
5428 7474 6.465084 TCCTTCTGTTTACCTCTTCTTTAGC 58.535 40.000 0.00 0.00 0.00 3.09
5454 7500 4.529897 TGCTGTTTCCATGAGCATAGATT 58.470 39.130 2.10 0.00 37.81 2.40
5565 7614 1.335810 CCGATTCATTGCACCATGGAG 59.664 52.381 21.47 12.70 0.00 3.86
5663 7712 3.073356 TGGTTTTACTGGTTAGGGTCCTG 59.927 47.826 0.00 0.00 0.00 3.86
5711 7760 9.888878 GTTTAGCTTATCGTTTCTTTTAGGTTT 57.111 29.630 0.00 0.00 0.00 3.27
5743 7792 7.080724 CCAAAAGAAGTCTTATCTGCTTTGAC 58.919 38.462 1.14 0.00 41.03 3.18
5755 7804 6.594788 ATCTGCTTTGACCAATAATTGTGT 57.405 33.333 0.00 0.00 0.00 3.72
5765 7814 6.371548 TGACCAATAATTGTGTACAAGAGCTC 59.628 38.462 5.27 5.27 39.47 4.09
5770 7819 4.623932 ATTGTGTACAAGAGCTCCTTCA 57.376 40.909 10.93 0.32 39.47 3.02
5785 7834 1.065418 CCTTCAGTTTGCCTACCCGAT 60.065 52.381 0.00 0.00 0.00 4.18
5798 7847 1.742761 ACCCGATGTGCATTTCTCAG 58.257 50.000 0.00 0.00 0.00 3.35
5883 7932 5.632034 AATCCTCCTATCCAACTAACACC 57.368 43.478 0.00 0.00 0.00 4.16
5910 7959 3.134458 GCTAGTGCATGGATTAGTGTCC 58.866 50.000 16.29 0.00 39.41 4.02
5966 8015 6.051179 AGTATACTTTTTCTGGAGGTCACC 57.949 41.667 0.00 0.00 0.00 4.02
5974 8023 9.004231 ACTTTTTCTGGAGGTCACCTATAATAT 57.996 33.333 0.00 0.00 31.76 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.560903 AGGTTCTCCCTCAAATAATATGAAGTT 58.439 33.333 0.00 0.00 40.71 2.66
41 42 1.490574 GATGTGCTCCTCACCCTAGT 58.509 55.000 0.00 0.00 45.03 2.57
43 44 0.042581 TGGATGTGCTCCTCACCCTA 59.957 55.000 0.00 0.00 45.21 3.53
49 50 4.883585 TGTATTTGAATGGATGTGCTCCTC 59.116 41.667 0.00 0.00 45.21 3.71
77 78 4.584325 TCTCTCAAGTTTTGATTGGTTGGG 59.416 41.667 0.00 0.00 39.30 4.12
84 85 6.658391 CCTCCTTCATCTCTCAAGTTTTGATT 59.342 38.462 0.00 0.00 39.30 2.57
143 144 2.424601 CAGATCGGTGGCATTTGTTCAT 59.575 45.455 0.00 0.00 0.00 2.57
146 147 1.176527 CCAGATCGGTGGCATTTGTT 58.823 50.000 0.00 0.00 0.00 2.83
162 163 6.426587 TCAATCCTCCTTTAAATCCTTCCAG 58.573 40.000 0.00 0.00 0.00 3.86
187 188 2.305927 TCTTCCCCATTGTCTCCTTCAC 59.694 50.000 0.00 0.00 0.00 3.18
190 191 1.918957 CCTCTTCCCCATTGTCTCCTT 59.081 52.381 0.00 0.00 0.00 3.36
212 213 0.745845 CTGGCCATCCCGAGTTCAAG 60.746 60.000 5.51 0.00 35.87 3.02
231 232 0.689412 CCCCTCTCCTTCCTCCTCAC 60.689 65.000 0.00 0.00 0.00 3.51
307 308 1.730451 CCAAGGACCGTGGCGTTTTT 61.730 55.000 13.90 0.00 0.00 1.94
322 324 4.588084 CGTTTCACACACGCCAAG 57.412 55.556 0.00 0.00 0.00 3.61
327 329 2.314647 ATCGGGCGTTTCACACACG 61.315 57.895 0.00 0.00 40.75 4.49
339 342 2.812542 GAAACGCCAAACCATCGGGC 62.813 60.000 0.00 0.00 44.27 6.13
345 348 2.636299 GGCTAGAAACGCCAAACCA 58.364 52.632 0.00 0.00 46.77 3.67
353 356 1.990563 CTTACGTGGTGGCTAGAAACG 59.009 52.381 0.00 0.00 40.00 3.60
363 366 2.380410 GGCGTCTGCTTACGTGGTG 61.380 63.158 0.00 0.00 44.64 4.17
364 367 2.048503 GGCGTCTGCTTACGTGGT 60.049 61.111 0.00 0.00 44.64 4.16
368 371 1.805945 GTGGAGGCGTCTGCTTACG 60.806 63.158 10.69 6.99 45.58 3.18
371 374 0.613260 TAATGTGGAGGCGTCTGCTT 59.387 50.000 10.69 0.00 42.25 3.91
372 375 0.176680 CTAATGTGGAGGCGTCTGCT 59.823 55.000 10.69 0.00 42.25 4.24
373 376 1.432270 GCTAATGTGGAGGCGTCTGC 61.432 60.000 0.00 0.00 41.71 4.26
374 377 0.811616 GGCTAATGTGGAGGCGTCTG 60.812 60.000 0.00 0.00 0.00 3.51
375 378 0.978146 AGGCTAATGTGGAGGCGTCT 60.978 55.000 6.34 0.00 43.94 4.18
376 379 0.811616 CAGGCTAATGTGGAGGCGTC 60.812 60.000 0.00 0.00 43.94 5.19
377 380 1.221840 CAGGCTAATGTGGAGGCGT 59.778 57.895 0.00 0.00 43.94 5.68
379 382 1.673168 CTTCAGGCTAATGTGGAGGC 58.327 55.000 0.00 0.00 39.71 4.70
380 383 1.561542 ACCTTCAGGCTAATGTGGAGG 59.438 52.381 0.00 0.00 39.32 4.30
381 384 2.636830 CACCTTCAGGCTAATGTGGAG 58.363 52.381 0.00 0.00 39.32 3.86
382 385 1.281867 CCACCTTCAGGCTAATGTGGA 59.718 52.381 17.72 0.00 43.78 4.02
383 386 1.683011 CCCACCTTCAGGCTAATGTGG 60.683 57.143 16.61 16.61 41.92 4.17
384 387 1.755179 CCCACCTTCAGGCTAATGTG 58.245 55.000 0.00 0.00 39.32 3.21
386 389 2.799176 GCCCACCTTCAGGCTAATG 58.201 57.895 0.00 0.00 46.14 1.90
478 1729 9.528489 AGGCTCATAAATCTTTAGTACCAAAAA 57.472 29.630 0.00 0.00 0.00 1.94
497 1748 6.435164 ACTTATTGGAACCAAATAGGCTCAT 58.565 36.000 10.36 0.00 43.14 2.90
499 1750 5.885912 TGACTTATTGGAACCAAATAGGCTC 59.114 40.000 18.22 10.87 43.14 4.70
500 1751 5.652452 GTGACTTATTGGAACCAAATAGGCT 59.348 40.000 18.22 0.00 43.14 4.58
502 1753 6.095440 CAGGTGACTTATTGGAACCAAATAGG 59.905 42.308 10.36 6.89 40.21 2.57
503 1754 6.884295 TCAGGTGACTTATTGGAACCAAATAG 59.116 38.462 10.36 12.04 40.21 1.73
504 1755 6.657541 GTCAGGTGACTTATTGGAACCAAATA 59.342 38.462 10.36 1.34 41.65 1.40
506 1757 4.825085 GTCAGGTGACTTATTGGAACCAAA 59.175 41.667 10.36 0.00 41.65 3.28
507 1758 4.394729 GTCAGGTGACTTATTGGAACCAA 58.605 43.478 8.75 8.75 41.65 3.67
536 1787 5.992217 AGTCACTGATTTTAAGTCACCTGAC 59.008 40.000 12.02 12.02 45.08 3.51
537 1788 6.174720 AGTCACTGATTTTAAGTCACCTGA 57.825 37.500 0.00 0.00 0.00 3.86
558 1809 5.985911 ACCAAATAGGCGTGACTTATAAGT 58.014 37.500 18.05 18.05 43.14 2.24
559 1810 6.315393 ACAACCAAATAGGCGTGACTTATAAG 59.685 38.462 11.05 11.05 43.14 1.73
562 1813 4.585879 ACAACCAAATAGGCGTGACTTAT 58.414 39.130 0.00 0.00 43.14 1.73
563 1814 3.998341 GACAACCAAATAGGCGTGACTTA 59.002 43.478 0.00 0.00 43.14 2.24
564 1815 2.812011 GACAACCAAATAGGCGTGACTT 59.188 45.455 0.00 0.00 43.14 3.01
565 1816 2.224426 TGACAACCAAATAGGCGTGACT 60.224 45.455 0.00 0.00 43.14 3.41
566 1817 2.147958 TGACAACCAAATAGGCGTGAC 58.852 47.619 0.00 0.00 43.14 3.67
567 1818 2.552599 TGACAACCAAATAGGCGTGA 57.447 45.000 0.00 0.00 43.14 4.35
568 1819 3.009723 AGATGACAACCAAATAGGCGTG 58.990 45.455 0.00 0.00 43.14 5.34
569 1820 3.350219 AGATGACAACCAAATAGGCGT 57.650 42.857 0.00 0.00 43.14 5.68
570 1821 4.876107 AGTTAGATGACAACCAAATAGGCG 59.124 41.667 0.00 0.00 43.14 5.52
571 1822 6.759497 AAGTTAGATGACAACCAAATAGGC 57.241 37.500 0.00 0.00 43.14 3.93
577 1828 9.431887 GTGACTTATAAGTTAGATGACAACCAA 57.568 33.333 18.96 0.00 39.88 3.67
578 1829 8.038944 GGTGACTTATAAGTTAGATGACAACCA 58.961 37.037 18.96 5.51 39.88 3.67
579 1830 8.258708 AGGTGACTTATAAGTTAGATGACAACC 58.741 37.037 18.96 13.81 39.88 3.77
581 1832 9.031537 TCAGGTGACTTATAAGTTAGATGACAA 57.968 33.333 18.96 0.13 39.88 3.18
582 1833 8.467598 GTCAGGTGACTTATAAGTTAGATGACA 58.532 37.037 28.44 17.11 39.01 3.58
583 1834 7.921745 GGTCAGGTGACTTATAAGTTAGATGAC 59.078 40.741 27.08 27.08 44.20 3.06
584 1835 7.618117 TGGTCAGGTGACTTATAAGTTAGATGA 59.382 37.037 18.96 16.71 44.20 2.92
587 1838 6.722590 TGTGGTCAGGTGACTTATAAGTTAGA 59.277 38.462 18.96 6.65 44.20 2.10
589 1840 6.295462 GGTGTGGTCAGGTGACTTATAAGTTA 60.295 42.308 18.96 12.54 44.20 2.24
590 1841 5.512576 GGTGTGGTCAGGTGACTTATAAGTT 60.513 44.000 18.96 0.63 44.20 2.66
591 1842 4.020485 GGTGTGGTCAGGTGACTTATAAGT 60.020 45.833 18.05 18.05 44.20 2.24
592 1843 4.223032 AGGTGTGGTCAGGTGACTTATAAG 59.777 45.833 11.05 11.05 44.20 1.73
593 1844 4.164981 AGGTGTGGTCAGGTGACTTATAA 58.835 43.478 9.90 0.00 44.20 0.98
594 1845 3.786553 AGGTGTGGTCAGGTGACTTATA 58.213 45.455 9.90 0.00 44.20 0.98
595 1846 2.621070 AGGTGTGGTCAGGTGACTTAT 58.379 47.619 9.90 0.00 44.20 1.73
596 1847 2.097110 AGGTGTGGTCAGGTGACTTA 57.903 50.000 9.90 0.00 44.20 2.24
597 1848 1.213296 AAGGTGTGGTCAGGTGACTT 58.787 50.000 9.90 0.00 44.20 3.01
598 1849 1.141053 GAAAGGTGTGGTCAGGTGACT 59.859 52.381 9.90 0.00 44.20 3.41
599 1850 1.594331 GAAAGGTGTGGTCAGGTGAC 58.406 55.000 1.17 1.17 44.04 3.67
600 1851 0.472471 GGAAAGGTGTGGTCAGGTGA 59.528 55.000 0.00 0.00 0.00 4.02
601 1852 0.182537 TGGAAAGGTGTGGTCAGGTG 59.817 55.000 0.00 0.00 0.00 4.00
602 1853 0.182775 GTGGAAAGGTGTGGTCAGGT 59.817 55.000 0.00 0.00 0.00 4.00
603 1854 0.537371 GGTGGAAAGGTGTGGTCAGG 60.537 60.000 0.00 0.00 0.00 3.86
605 1856 0.923358 AAGGTGGAAAGGTGTGGTCA 59.077 50.000 0.00 0.00 0.00 4.02
607 1858 0.629058 ACAAGGTGGAAAGGTGTGGT 59.371 50.000 0.00 0.00 0.00 4.16
608 1859 1.775385 AACAAGGTGGAAAGGTGTGG 58.225 50.000 0.00 0.00 0.00 4.17
609 1860 3.885724 AAAACAAGGTGGAAAGGTGTG 57.114 42.857 0.00 0.00 0.00 3.82
630 1881 3.307621 GGGTCCCGTCACCTTTACATTAA 60.308 47.826 0.00 0.00 36.57 1.40
631 1882 2.236893 GGGTCCCGTCACCTTTACATTA 59.763 50.000 0.00 0.00 36.57 1.90
633 1884 0.616891 GGGTCCCGTCACCTTTACAT 59.383 55.000 0.00 0.00 36.57 2.29
634 1885 0.763604 TGGGTCCCGTCACCTTTACA 60.764 55.000 2.65 0.00 36.57 2.41
635 1886 0.321034 GTGGGTCCCGTCACCTTTAC 60.321 60.000 2.65 0.00 36.57 2.01
636 1887 1.818959 CGTGGGTCCCGTCACCTTTA 61.819 60.000 2.65 0.00 36.57 1.85
640 1891 2.098426 TTTACGTGGGTCCCGTCACC 62.098 60.000 2.65 0.00 39.60 4.02
642 1893 0.033781 CTTTTACGTGGGTCCCGTCA 59.966 55.000 2.65 0.00 39.60 4.35
643 1894 0.671472 CCTTTTACGTGGGTCCCGTC 60.671 60.000 2.65 0.00 39.60 4.79
644 1895 1.372307 CCTTTTACGTGGGTCCCGT 59.628 57.895 2.65 0.48 42.06 5.28
645 1896 1.376295 CCCTTTTACGTGGGTCCCG 60.376 63.158 2.65 0.00 38.65 5.14
646 1897 1.001764 CCCCTTTTACGTGGGTCCC 60.002 63.158 0.00 0.00 41.82 4.46
648 1899 4.728409 CCCCCTTTTACGTGGGTC 57.272 61.111 7.83 0.00 41.82 4.46
650 1901 0.607217 GTCACCCCCTTTTACGTGGG 60.607 60.000 0.00 0.55 44.03 4.61
652 1903 1.877443 CAAGTCACCCCCTTTTACGTG 59.123 52.381 0.00 0.00 0.00 4.49
653 1904 1.491754 ACAAGTCACCCCCTTTTACGT 59.508 47.619 0.00 0.00 0.00 3.57
654 1905 2.265589 ACAAGTCACCCCCTTTTACG 57.734 50.000 0.00 0.00 0.00 3.18
655 1906 6.659745 AATTTACAAGTCACCCCCTTTTAC 57.340 37.500 0.00 0.00 0.00 2.01
656 1907 7.678207 AAAATTTACAAGTCACCCCCTTTTA 57.322 32.000 0.00 0.00 0.00 1.52
660 1911 6.378745 ACTTAAAATTTACAAGTCACCCCCT 58.621 36.000 10.74 0.00 0.00 4.79
662 1913 6.926826 CCAACTTAAAATTTACAAGTCACCCC 59.073 38.462 14.96 0.00 31.43 4.95
663 1914 6.926826 CCCAACTTAAAATTTACAAGTCACCC 59.073 38.462 14.96 0.00 31.43 4.61
664 1915 6.926826 CCCCAACTTAAAATTTACAAGTCACC 59.073 38.462 14.96 0.00 31.43 4.02
665 1916 7.436970 CACCCCAACTTAAAATTTACAAGTCAC 59.563 37.037 14.96 0.00 31.43 3.67
666 1917 7.418025 CCACCCCAACTTAAAATTTACAAGTCA 60.418 37.037 14.96 0.00 31.43 3.41
667 1918 6.926826 CCACCCCAACTTAAAATTTACAAGTC 59.073 38.462 14.96 0.00 31.43 3.01
670 1921 6.463190 GCTCCACCCCAACTTAAAATTTACAA 60.463 38.462 0.00 0.00 0.00 2.41
673 1924 4.218852 CGCTCCACCCCAACTTAAAATTTA 59.781 41.667 0.00 0.00 0.00 1.40
674 1925 3.006430 CGCTCCACCCCAACTTAAAATTT 59.994 43.478 0.00 0.00 0.00 1.82
676 1927 2.167662 CGCTCCACCCCAACTTAAAAT 58.832 47.619 0.00 0.00 0.00 1.82
677 1928 1.143277 TCGCTCCACCCCAACTTAAAA 59.857 47.619 0.00 0.00 0.00 1.52
678 1929 0.766131 TCGCTCCACCCCAACTTAAA 59.234 50.000 0.00 0.00 0.00 1.52
679 1930 0.323629 CTCGCTCCACCCCAACTTAA 59.676 55.000 0.00 0.00 0.00 1.85
680 1931 0.834687 ACTCGCTCCACCCCAACTTA 60.835 55.000 0.00 0.00 0.00 2.24
681 1932 1.705997 AACTCGCTCCACCCCAACTT 61.706 55.000 0.00 0.00 0.00 2.66
682 1933 0.834687 TAACTCGCTCCACCCCAACT 60.835 55.000 0.00 0.00 0.00 3.16
683 1934 0.252197 ATAACTCGCTCCACCCCAAC 59.748 55.000 0.00 0.00 0.00 3.77
684 1935 0.251916 CATAACTCGCTCCACCCCAA 59.748 55.000 0.00 0.00 0.00 4.12
685 1936 0.616395 TCATAACTCGCTCCACCCCA 60.616 55.000 0.00 0.00 0.00 4.96
686 1937 0.179081 GTCATAACTCGCTCCACCCC 60.179 60.000 0.00 0.00 0.00 4.95
687 1938 0.824759 AGTCATAACTCGCTCCACCC 59.175 55.000 0.00 0.00 0.00 4.61
688 1939 2.674796 AAGTCATAACTCGCTCCACC 57.325 50.000 0.00 0.00 33.48 4.61
689 1940 6.505272 ACTTATAAGTCATAACTCGCTCCAC 58.495 40.000 12.50 0.00 32.86 4.02
690 1941 6.710597 ACTTATAAGTCATAACTCGCTCCA 57.289 37.500 12.50 0.00 32.86 3.86
691 1942 7.808856 CCTAACTTATAAGTCATAACTCGCTCC 59.191 40.741 18.28 0.00 38.57 4.70
692 1943 7.808856 CCCTAACTTATAAGTCATAACTCGCTC 59.191 40.741 18.28 0.00 38.57 5.03
693 1944 7.287235 ACCCTAACTTATAAGTCATAACTCGCT 59.713 37.037 18.28 1.87 38.57 4.93
694 1945 7.381678 CACCCTAACTTATAAGTCATAACTCGC 59.618 40.741 18.28 0.00 38.57 5.03
695 1946 8.627403 TCACCCTAACTTATAAGTCATAACTCG 58.373 37.037 18.28 4.51 38.57 4.18
696 1947 9.747293 GTCACCCTAACTTATAAGTCATAACTC 57.253 37.037 18.28 3.66 38.57 3.01
697 1948 9.490083 AGTCACCCTAACTTATAAGTCATAACT 57.510 33.333 18.28 12.05 38.57 2.24
707 1958 9.729281 CCAACTTTTAAGTCACCCTAACTTATA 57.271 33.333 0.00 0.00 38.60 0.98
708 1959 7.668469 CCCAACTTTTAAGTCACCCTAACTTAT 59.332 37.037 0.00 0.00 38.60 1.73
709 1960 6.999871 CCCAACTTTTAAGTCACCCTAACTTA 59.000 38.462 0.00 0.00 38.57 2.24
710 1961 5.831525 CCCAACTTTTAAGTCACCCTAACTT 59.168 40.000 0.00 0.00 38.57 2.66
711 1962 5.103813 ACCCAACTTTTAAGTCACCCTAACT 60.104 40.000 0.00 0.00 38.57 2.24
712 1963 5.135383 ACCCAACTTTTAAGTCACCCTAAC 58.865 41.667 0.00 0.00 38.57 2.34
713 1964 5.133153 AGACCCAACTTTTAAGTCACCCTAA 59.867 40.000 0.00 0.00 38.57 2.69
714 1965 4.661709 AGACCCAACTTTTAAGTCACCCTA 59.338 41.667 0.00 0.00 38.57 3.53
715 1966 3.462205 AGACCCAACTTTTAAGTCACCCT 59.538 43.478 0.00 0.00 38.57 4.34
716 1967 3.568430 CAGACCCAACTTTTAAGTCACCC 59.432 47.826 0.00 0.00 38.57 4.61
717 1968 4.204799 ACAGACCCAACTTTTAAGTCACC 58.795 43.478 0.00 0.00 38.57 4.02
718 1969 5.830000 AACAGACCCAACTTTTAAGTCAC 57.170 39.130 0.00 0.00 38.57 3.67
719 1970 5.946972 TCAAACAGACCCAACTTTTAAGTCA 59.053 36.000 0.00 0.00 38.57 3.41
720 1971 6.263344 GTCAAACAGACCCAACTTTTAAGTC 58.737 40.000 0.00 0.00 41.56 3.01
721 1972 6.203808 GTCAAACAGACCCAACTTTTAAGT 57.796 37.500 0.00 0.00 41.56 2.24
732 1983 7.926018 AAATGACTTATTTTGTCAAACAGACCC 59.074 33.333 0.00 0.00 45.82 4.46
733 1984 8.871686 AAATGACTTATTTTGTCAAACAGACC 57.128 30.769 0.00 0.00 45.82 3.85
803 2054 9.830186 ACTCTTATGACCTTATATAGACCATGT 57.170 33.333 0.00 0.00 0.00 3.21
814 2065 6.547510 GGCCAAAATCACTCTTATGACCTTAT 59.452 38.462 0.00 0.00 0.00 1.73
815 2066 5.885912 GGCCAAAATCACTCTTATGACCTTA 59.114 40.000 0.00 0.00 0.00 2.69
818 2069 3.381590 GGGCCAAAATCACTCTTATGACC 59.618 47.826 4.39 0.00 0.00 4.02
819 2070 4.273318 AGGGCCAAAATCACTCTTATGAC 58.727 43.478 6.18 0.00 0.00 3.06
822 2694 7.978099 ATTTTAGGGCCAAAATCACTCTTAT 57.022 32.000 6.18 0.00 33.82 1.73
838 2710 1.743394 GGTCGTGGCAAGATTTTAGGG 59.257 52.381 6.37 0.00 0.00 3.53
1014 2895 1.139095 CGTGCCGGAGAAGTAGGAC 59.861 63.158 5.05 0.00 0.00 3.85
1520 3416 1.079819 CTCACCACCGCACGAGATT 60.080 57.895 0.00 0.00 0.00 2.40
1548 3444 4.342092 AGTTGAAACATGAAGGGGTGAAAG 59.658 41.667 0.00 0.00 0.00 2.62
1551 3447 3.593442 AGTTGAAACATGAAGGGGTGA 57.407 42.857 0.00 0.00 0.00 4.02
1629 3527 4.270008 TCTGTCTCGTCATTGATCCTACA 58.730 43.478 0.00 0.00 0.00 2.74
1720 3619 5.762179 AGGATATCAGAACACTTCCAACA 57.238 39.130 4.83 0.00 0.00 3.33
1721 3620 6.879400 ACTAGGATATCAGAACACTTCCAAC 58.121 40.000 4.83 0.00 0.00 3.77
1859 3758 4.702131 ACATCAACACTAAAGGAATCCAGC 59.298 41.667 0.61 0.00 0.00 4.85
1872 3825 0.949397 CAGCACAGCACATCAACACT 59.051 50.000 0.00 0.00 0.00 3.55
1875 3828 1.197721 GTACCAGCACAGCACATCAAC 59.802 52.381 0.00 0.00 0.00 3.18
1884 3837 5.423015 ACAAATAGATGAGTACCAGCACAG 58.577 41.667 3.09 0.00 32.59 3.66
1885 3838 5.420725 ACAAATAGATGAGTACCAGCACA 57.579 39.130 3.09 0.00 32.59 4.57
1886 3839 5.643777 ACAACAAATAGATGAGTACCAGCAC 59.356 40.000 3.09 0.00 32.59 4.40
1887 3840 5.804639 ACAACAAATAGATGAGTACCAGCA 58.195 37.500 3.09 0.00 32.59 4.41
1888 3841 7.042335 AGTACAACAAATAGATGAGTACCAGC 58.958 38.462 0.00 0.00 36.72 4.85
1889 3842 9.737427 CTAGTACAACAAATAGATGAGTACCAG 57.263 37.037 0.00 0.00 36.72 4.00
1890 3843 9.470399 TCTAGTACAACAAATAGATGAGTACCA 57.530 33.333 0.00 0.00 36.72 3.25
1896 3849 9.944376 AGCTTTTCTAGTACAACAAATAGATGA 57.056 29.630 0.00 0.00 0.00 2.92
1943 3896 5.068329 CAGTAACAGTCAGATGGCTCAGATA 59.932 44.000 0.00 0.00 0.00 1.98
1951 3904 4.161189 ACCAGATCAGTAACAGTCAGATGG 59.839 45.833 0.00 0.00 0.00 3.51
2007 3960 2.774439 ATCGCACTGTGAAAACAACC 57.226 45.000 12.86 0.00 0.00 3.77
2042 3995 6.305160 GCACAATTTTGAACAACCAAACAAAG 59.695 34.615 0.00 0.00 35.95 2.77
2047 4000 5.486526 AGAGCACAATTTTGAACAACCAAA 58.513 33.333 0.00 0.00 34.56 3.28
2048 4001 5.083533 AGAGCACAATTTTGAACAACCAA 57.916 34.783 0.00 0.00 0.00 3.67
2050 4003 4.869861 ACAAGAGCACAATTTTGAACAACC 59.130 37.500 0.00 0.00 0.00 3.77
2059 4012 5.581126 TGAAGACAACAAGAGCACAATTT 57.419 34.783 0.00 0.00 0.00 1.82
2061 4014 5.779529 AATGAAGACAACAAGAGCACAAT 57.220 34.783 0.00 0.00 0.00 2.71
2062 4015 6.882610 ATAATGAAGACAACAAGAGCACAA 57.117 33.333 0.00 0.00 0.00 3.33
2063 4016 6.882610 AATAATGAAGACAACAAGAGCACA 57.117 33.333 0.00 0.00 0.00 4.57
2064 4017 7.141363 ACAAATAATGAAGACAACAAGAGCAC 58.859 34.615 0.00 0.00 0.00 4.40
2081 4034 3.075283 TGGTGTGGAGGTGGACAAATAAT 59.925 43.478 0.00 0.00 0.00 1.28
2175 4128 4.253685 GCTATAGTCACAAAACCTCTGCA 58.746 43.478 0.84 0.00 0.00 4.41
2187 4140 7.320443 TGTTCCATTCAAATGCTATAGTCAC 57.680 36.000 0.84 0.00 35.08 3.67
2188 4141 7.936496 TTGTTCCATTCAAATGCTATAGTCA 57.064 32.000 0.84 0.55 35.08 3.41
2189 4142 8.408601 ACATTGTTCCATTCAAATGCTATAGTC 58.591 33.333 0.84 0.00 35.08 2.59
2190 4143 8.297470 ACATTGTTCCATTCAAATGCTATAGT 57.703 30.769 0.84 0.00 35.08 2.12
2241 4200 1.401761 AATTGGCACAGCACTCACAA 58.598 45.000 0.00 0.00 42.39 3.33
2242 4201 2.268762 TAATTGGCACAGCACTCACA 57.731 45.000 0.00 0.00 42.39 3.58
2277 4236 4.386867 TCCTCGGTATCTCACACATTTC 57.613 45.455 0.00 0.00 0.00 2.17
2285 4244 6.608405 TGTAAACCTTTATCCTCGGTATCTCA 59.392 38.462 0.00 0.00 0.00 3.27
2346 4305 9.683069 TCAATCAAGATTTTAAAAGAGAGCAAC 57.317 29.630 6.79 0.00 0.00 4.17
2383 4343 8.581253 TGACACAGAGATAACTATTCTGAGAA 57.419 34.615 0.00 0.00 40.54 2.87
2384 4344 7.831690 ACTGACACAGAGATAACTATTCTGAGA 59.168 37.037 7.64 0.00 40.54 3.27
2426 4386 7.984050 AGTCATCCATGAAGTTATGTACAAGAG 59.016 37.037 0.00 0.00 38.75 2.85
2470 4430 4.940046 TCCACAAACAACGGTAACTTAACA 59.060 37.500 0.00 0.00 0.00 2.41
2472 4432 5.879223 TCTTCCACAAACAACGGTAACTTAA 59.121 36.000 0.00 0.00 0.00 1.85
2479 4439 4.035909 GTGTTATCTTCCACAAACAACGGT 59.964 41.667 0.00 0.00 33.92 4.83
2519 4488 6.036083 GCACAGCTGAAATTACGAAATAGAGA 59.964 38.462 23.35 0.00 0.00 3.10
2520 4489 6.036517 AGCACAGCTGAAATTACGAAATAGAG 59.963 38.462 23.35 0.00 37.57 2.43
2567 4536 7.038302 TGGTGAACCTTAGTATTGAGATTCACT 60.038 37.037 14.47 0.00 42.63 3.41
2606 4575 7.508687 ACAGTATGCATCATTCAGTAACCATA 58.491 34.615 0.19 0.00 42.53 2.74
2607 4576 6.359804 ACAGTATGCATCATTCAGTAACCAT 58.640 36.000 0.19 0.00 42.53 3.55
2610 4579 6.536582 ACTGACAGTATGCATCATTCAGTAAC 59.463 38.462 22.22 6.81 42.53 2.50
2694 4670 9.341899 GCAGTACACTTCACATTTTATAAAAGG 57.658 33.333 18.42 18.42 35.92 3.11
2700 4676 8.239314 CAGATTGCAGTACACTTCACATTTTAT 58.761 33.333 0.00 0.00 0.00 1.40
2701 4677 7.443879 TCAGATTGCAGTACACTTCACATTTTA 59.556 33.333 0.00 0.00 0.00 1.52
2702 4678 6.262944 TCAGATTGCAGTACACTTCACATTTT 59.737 34.615 0.00 0.00 0.00 1.82
2707 4683 4.752101 AGTTCAGATTGCAGTACACTTCAC 59.248 41.667 0.00 0.00 0.00 3.18
2719 4695 6.201806 GTGATATGTCCAGTAGTTCAGATTGC 59.798 42.308 0.00 0.00 0.00 3.56
2742 4718 2.684881 AGTTCAGTTTCCAGCTTGTGTG 59.315 45.455 0.00 0.00 0.00 3.82
2791 4767 6.884472 TGGAAAGTGGAAATATAGGACAGA 57.116 37.500 0.00 0.00 0.00 3.41
2828 4833 5.290493 TGTCCACAGAACAGTTACTTCAT 57.710 39.130 0.00 0.00 0.00 2.57
2846 4851 7.092716 ACAAAAATTACAATCATGAGCTGTCC 58.907 34.615 14.71 0.00 0.00 4.02
2929 4934 6.769822 TGTTAGTAAACAATAACCGGTGGAAA 59.230 34.615 8.52 0.00 42.60 3.13
3125 5130 9.967451 TTAATGGTGTCTCTCATACCAAATTAA 57.033 29.630 0.00 0.00 46.56 1.40
3133 5138 9.499479 AATGATCATTAATGGTGTCTCTCATAC 57.501 33.333 19.42 0.00 0.00 2.39
3161 5166 5.285651 CCTTGCATCTTTAAAACGGAAACA 58.714 37.500 0.00 0.00 0.00 2.83
3162 5167 4.684242 CCCTTGCATCTTTAAAACGGAAAC 59.316 41.667 0.00 0.00 0.00 2.78
3243 5248 3.996921 ATGGACTTGCTGTTCTCTCAT 57.003 42.857 0.00 0.00 0.00 2.90
3443 5448 2.343163 GATGGTCTCTCACTCCGCCG 62.343 65.000 0.00 0.00 0.00 6.46
3542 5547 4.708421 AGTATAGACAAGTACGCTTTCCCA 59.292 41.667 0.00 0.00 31.49 4.37
3545 5550 8.015409 ACAAAAGTATAGACAAGTACGCTTTC 57.985 34.615 0.00 0.00 31.49 2.62
3588 5593 4.377021 TCGGCAGCTCACGATAATAAAAT 58.623 39.130 5.24 0.00 33.69 1.82
3665 5670 3.181510 GCTGGTACATAAAACAGAAGGCG 60.182 47.826 0.00 0.00 38.20 5.52
3718 5723 9.868277 AGAAAATATCTCACAGTCAGTTAAGAG 57.132 33.333 0.00 0.00 30.46 2.85
3730 5735 7.518161 CAAACTACGCAAGAAAATATCTCACA 58.482 34.615 0.00 0.00 37.42 3.58
3731 5736 6.466097 GCAAACTACGCAAGAAAATATCTCAC 59.534 38.462 0.00 0.00 37.42 3.51
3859 5864 7.867403 CCATAATGATATGCAACCTTTTACCAC 59.133 37.037 0.00 0.00 38.06 4.16
3907 5912 4.202243 ACGTACACCTAACTAAGCAAACCA 60.202 41.667 0.00 0.00 0.00 3.67
4023 6028 5.185249 GTCAATTCTAGACACCAGACCTACA 59.815 44.000 0.00 0.00 36.06 2.74
4063 6068 7.629437 GCCTTTTTACTCTTTCTGATCATTCCC 60.629 40.741 0.00 0.00 0.00 3.97
4238 6263 9.508567 GTTTTTCTATGCATGATTAGGAGTTTC 57.491 33.333 10.16 0.00 0.00 2.78
4259 6284 6.592870 AGGAGTAGTAAGCACTCTTGTTTTT 58.407 36.000 2.81 0.00 41.78 1.94
4280 6305 6.995686 TGATTTGCTTGTACAGAAAACTAGGA 59.004 34.615 0.00 0.00 32.24 2.94
4331 6356 1.492764 TTTGGGATCGGAGGGAGTAC 58.507 55.000 0.00 0.00 0.00 2.73
4332 6357 2.257391 TTTTGGGATCGGAGGGAGTA 57.743 50.000 0.00 0.00 0.00 2.59
4333 6358 1.596496 ATTTTGGGATCGGAGGGAGT 58.404 50.000 0.00 0.00 0.00 3.85
4334 6359 3.136626 ACTTATTTTGGGATCGGAGGGAG 59.863 47.826 0.00 0.00 0.00 4.30
4335 6360 3.118038 CACTTATTTTGGGATCGGAGGGA 60.118 47.826 0.00 0.00 0.00 4.20
4336 6361 3.214328 CACTTATTTTGGGATCGGAGGG 58.786 50.000 0.00 0.00 0.00 4.30
4337 6362 3.877508 GACACTTATTTTGGGATCGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4338 6363 4.770795 AGACACTTATTTTGGGATCGGAG 58.229 43.478 0.00 0.00 0.00 4.63
4339 6364 4.224147 TGAGACACTTATTTTGGGATCGGA 59.776 41.667 0.00 0.00 0.00 4.55
4340 6365 4.513442 TGAGACACTTATTTTGGGATCGG 58.487 43.478 0.00 0.00 0.00 4.18
4341 6366 5.643777 AGTTGAGACACTTATTTTGGGATCG 59.356 40.000 0.00 0.00 0.00 3.69
4342 6367 7.454260 AAGTTGAGACACTTATTTTGGGATC 57.546 36.000 0.00 0.00 35.10 3.36
4343 6368 7.287696 ACAAAGTTGAGACACTTATTTTGGGAT 59.712 33.333 0.00 0.00 35.87 3.85
4344 6369 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4345 6370 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4346 6371 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4349 6374 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
4350 6375 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
4351 6376 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
4352 6377 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
4353 6378 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
4354 6379 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
4355 6380 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
4356 6381 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
4357 6382 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
4382 6407 9.726438 AGTGTCTTGAGCTTAGTATAAATTTGT 57.274 29.630 0.00 0.00 0.00 2.83
4390 6415 9.167311 CCAAAATAAGTGTCTTGAGCTTAGTAT 57.833 33.333 0.00 0.00 0.00 2.12
4391 6416 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
4392 6417 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
4393 6418 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
4394 6419 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
4395 6420 5.241728 GTCCCAAAATAAGTGTCTTGAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
4396 6421 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
4397 6422 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
4398 6423 4.154195 CCGTCCCAAAATAAGTGTCTTGAG 59.846 45.833 0.00 0.00 0.00 3.02
4399 6424 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
4400 6425 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
4401 6426 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
4402 6427 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4403 6428 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4404 6429 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4405 6430 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4406 6431 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4407 6432 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4408 6433 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4409 6434 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4410 6435 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4411 6436 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
4412 6437 1.557832 CAATACTCCCTCCGTCCCAAA 59.442 52.381 0.00 0.00 0.00 3.28
4413 6438 1.200519 CAATACTCCCTCCGTCCCAA 58.799 55.000 0.00 0.00 0.00 4.12
4414 6439 1.335132 GCAATACTCCCTCCGTCCCA 61.335 60.000 0.00 0.00 0.00 4.37
4415 6440 1.446366 GCAATACTCCCTCCGTCCC 59.554 63.158 0.00 0.00 0.00 4.46
4416 6441 1.067582 CGCAATACTCCCTCCGTCC 59.932 63.158 0.00 0.00 0.00 4.79
4417 6442 1.591863 GCGCAATACTCCCTCCGTC 60.592 63.158 0.30 0.00 0.00 4.79
4418 6443 2.017559 GAGCGCAATACTCCCTCCGT 62.018 60.000 11.47 0.00 0.00 4.69
4419 6444 1.300233 GAGCGCAATACTCCCTCCG 60.300 63.158 11.47 0.00 0.00 4.63
4420 6445 1.069935 GGAGCGCAATACTCCCTCC 59.930 63.158 11.47 0.00 46.81 4.30
4421 6446 4.760757 GGAGCGCAATACTCCCTC 57.239 61.111 11.47 0.00 46.81 4.30
4425 6450 5.796350 TTTCTTTAAGGAGCGCAATACTC 57.204 39.130 11.47 0.00 0.00 2.59
4426 6451 6.759497 ATTTTCTTTAAGGAGCGCAATACT 57.241 33.333 11.47 0.00 0.00 2.12
4485 6525 3.788333 AACAAAGGGATCATGCAATCG 57.212 42.857 0.00 0.00 0.00 3.34
4546 6587 1.279271 ACCACTGAAGTATCCAGCCAC 59.721 52.381 0.00 0.00 35.14 5.01
4751 6796 9.690913 TTTCTTCAATTCAATACTGATCTGGAT 57.309 29.630 4.49 0.00 0.00 3.41
4793 6838 2.612972 CGGGAAGCAACAGTCAGTACAT 60.613 50.000 0.00 0.00 0.00 2.29
4919 6964 1.380524 ACTCAGATCATGCAAGCAGC 58.619 50.000 0.00 0.00 45.96 5.25
4920 6965 3.439129 TCAAACTCAGATCATGCAAGCAG 59.561 43.478 0.00 0.00 0.00 4.24
4921 6966 3.189910 GTCAAACTCAGATCATGCAAGCA 59.810 43.478 0.00 0.00 0.00 3.91
4973 7018 6.156256 ACCCTGTATCAGCAAGTAAGTTGATA 59.844 38.462 0.00 0.00 39.64 2.15
4985 7030 1.204704 CAGACGAACCCTGTATCAGCA 59.795 52.381 0.00 0.00 0.00 4.41
5112 7157 7.634671 TCGTGTTCCAAGTAGATCATTAGTA 57.365 36.000 0.00 0.00 0.00 1.82
5113 7158 6.525578 TCGTGTTCCAAGTAGATCATTAGT 57.474 37.500 0.00 0.00 0.00 2.24
5114 7159 6.980978 ACATCGTGTTCCAAGTAGATCATTAG 59.019 38.462 0.00 0.00 0.00 1.73
5126 7171 2.546368 GTGCACTTACATCGTGTTCCAA 59.454 45.455 10.32 0.00 34.91 3.53
5130 7175 2.833794 ACAGTGCACTTACATCGTGTT 58.166 42.857 18.94 0.00 34.91 3.32
5157 7202 2.540101 GACTGAGTCAAACCACTGAACG 59.460 50.000 7.90 0.00 32.09 3.95
5160 7205 3.181465 GGAAGACTGAGTCAAACCACTGA 60.181 47.826 15.86 0.00 34.60 3.41
5171 7216 4.636249 GACTGTCAAATGGAAGACTGAGT 58.364 43.478 2.24 0.00 37.22 3.41
5276 7322 3.837213 AGCACACAAGCATGAACATAC 57.163 42.857 0.00 0.00 36.85 2.39
5294 7340 6.032042 GTGTTGTAACATAACATAACGCAAGC 59.968 38.462 0.26 0.00 41.59 4.01
5309 7355 9.016438 AGGAAAAACTAGAAAAGTGTTGTAACA 57.984 29.630 0.00 0.00 35.70 2.41
5388 7434 8.477419 AACAGAAGGATAAAATCAGTTGGAAA 57.523 30.769 0.00 0.00 0.00 3.13
5389 7435 8.477419 AAACAGAAGGATAAAATCAGTTGGAA 57.523 30.769 0.00 0.00 0.00 3.53
5390 7436 9.010029 GTAAACAGAAGGATAAAATCAGTTGGA 57.990 33.333 0.00 0.00 0.00 3.53
5391 7437 8.244113 GGTAAACAGAAGGATAAAATCAGTTGG 58.756 37.037 0.00 0.00 0.00 3.77
5392 7438 9.014297 AGGTAAACAGAAGGATAAAATCAGTTG 57.986 33.333 0.00 0.00 0.00 3.16
5393 7439 9.232473 GAGGTAAACAGAAGGATAAAATCAGTT 57.768 33.333 0.00 0.00 0.00 3.16
5394 7440 8.606830 AGAGGTAAACAGAAGGATAAAATCAGT 58.393 33.333 0.00 0.00 0.00 3.41
5395 7441 9.454859 AAGAGGTAAACAGAAGGATAAAATCAG 57.545 33.333 0.00 0.00 0.00 2.90
5396 7442 9.449719 GAAGAGGTAAACAGAAGGATAAAATCA 57.550 33.333 0.00 0.00 0.00 2.57
5397 7443 9.674068 AGAAGAGGTAAACAGAAGGATAAAATC 57.326 33.333 0.00 0.00 0.00 2.17
5399 7445 9.862149 AAAGAAGAGGTAAACAGAAGGATAAAA 57.138 29.630 0.00 0.00 0.00 1.52
5402 7448 8.258708 GCTAAAGAAGAGGTAAACAGAAGGATA 58.741 37.037 0.00 0.00 0.00 2.59
5403 7449 7.106890 GCTAAAGAAGAGGTAAACAGAAGGAT 58.893 38.462 0.00 0.00 0.00 3.24
5404 7450 6.465084 GCTAAAGAAGAGGTAAACAGAAGGA 58.535 40.000 0.00 0.00 0.00 3.36
5405 7451 5.644206 GGCTAAAGAAGAGGTAAACAGAAGG 59.356 44.000 0.00 0.00 0.00 3.46
5406 7452 6.468543 AGGCTAAAGAAGAGGTAAACAGAAG 58.531 40.000 0.00 0.00 0.00 2.85
5407 7453 6.270231 AGAGGCTAAAGAAGAGGTAAACAGAA 59.730 38.462 0.00 0.00 0.00 3.02
5408 7454 5.780793 AGAGGCTAAAGAAGAGGTAAACAGA 59.219 40.000 0.00 0.00 0.00 3.41
5409 7455 5.872070 CAGAGGCTAAAGAAGAGGTAAACAG 59.128 44.000 0.00 0.00 0.00 3.16
5410 7456 5.794894 CAGAGGCTAAAGAAGAGGTAAACA 58.205 41.667 0.00 0.00 0.00 2.83
5411 7457 4.632251 GCAGAGGCTAAAGAAGAGGTAAAC 59.368 45.833 0.00 0.00 36.96 2.01
5412 7458 4.833390 GCAGAGGCTAAAGAAGAGGTAAA 58.167 43.478 0.00 0.00 36.96 2.01
5413 7459 4.473477 GCAGAGGCTAAAGAAGAGGTAA 57.527 45.455 0.00 0.00 36.96 2.85
5466 7512 5.178797 AGTTTATGGGATCGAACAGAAGTG 58.821 41.667 0.00 0.00 0.00 3.16
5467 7513 5.422214 AGTTTATGGGATCGAACAGAAGT 57.578 39.130 0.00 0.00 0.00 3.01
5663 7712 5.105752 ACTAGAAGACAATGCATCGAACTC 58.894 41.667 0.00 0.00 0.00 3.01
5711 7760 7.040409 GCAGATAAGACTTCTTTTGGGAAGAAA 60.040 37.037 10.60 0.00 43.70 2.52
5712 7761 6.431234 GCAGATAAGACTTCTTTTGGGAAGAA 59.569 38.462 10.60 3.26 43.70 2.52
5743 7792 5.882557 AGGAGCTCTTGTACACAATTATTGG 59.117 40.000 14.64 1.39 35.02 3.16
5755 7804 3.403038 GCAAACTGAAGGAGCTCTTGTA 58.597 45.455 14.64 0.00 35.50 2.41
5765 7814 0.323629 TCGGGTAGGCAAACTGAAGG 59.676 55.000 0.00 0.00 0.00 3.46
5770 7819 0.676782 GCACATCGGGTAGGCAAACT 60.677 55.000 0.00 0.00 0.00 2.66
5785 7834 3.076621 GACACCATCTGAGAAATGCACA 58.923 45.455 0.00 0.00 0.00 4.57
5798 7847 2.544694 CCTACGATCAGCAGACACCATC 60.545 54.545 0.00 0.00 0.00 3.51
5910 7959 4.367386 AAGATAACACGTAGAGGGTTCG 57.633 45.455 0.00 0.00 44.62 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.