Multiple sequence alignment - TraesCS7A01G430300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G430300 chr7A 100.000 2591 0 0 1 2591 624886350 624888940 0.000000e+00 4785
1 TraesCS7A01G430300 chr7A 88.819 1118 78 21 680 1774 624840421 624841514 0.000000e+00 1328
2 TraesCS7A01G430300 chr7A 80.446 1166 112 61 697 1774 624957370 624958507 0.000000e+00 784
3 TraesCS7A01G430300 chr7A 89.529 191 19 1 493 682 27519727 27519537 9.260000e-60 241
4 TraesCS7A01G430300 chr7B 91.297 1195 73 13 682 1861 585944241 585945419 0.000000e+00 1602
5 TraesCS7A01G430300 chr7B 86.702 1128 89 31 682 1774 586066994 586068095 0.000000e+00 1195
6 TraesCS7A01G430300 chr7B 90.424 731 54 5 822 1537 585991623 585992352 0.000000e+00 948
7 TraesCS7A01G430300 chr7B 82.271 1004 96 37 697 1639 586116142 586117124 0.000000e+00 793
8 TraesCS7A01G430300 chr7B 82.729 828 78 28 987 1774 586240663 586241465 0.000000e+00 676
9 TraesCS7A01G430300 chr7B 89.076 476 39 6 1 470 56922570 56922102 1.730000e-161 579
10 TraesCS7A01G430300 chr7B 90.024 421 28 10 1529 1940 585997018 585997433 1.360000e-147 532
11 TraesCS7A01G430300 chr7B 80.686 554 69 16 1113 1638 586128947 586129490 1.870000e-106 396
12 TraesCS7A01G430300 chr7B 84.711 242 26 7 679 914 585912250 585912486 5.580000e-57 231
13 TraesCS7A01G430300 chr7B 95.960 99 3 1 1844 1941 585945436 585945534 2.670000e-35 159
14 TraesCS7A01G430300 chr7D 93.643 1054 35 7 903 1941 542825882 542826918 0.000000e+00 1546
15 TraesCS7A01G430300 chr7D 90.820 1122 41 22 679 1782 542885708 542886785 0.000000e+00 1445
16 TraesCS7A01G430300 chr7D 81.250 1136 111 50 697 1773 542957324 542958416 0.000000e+00 824
17 TraesCS7A01G430300 chr7D 88.855 655 43 12 1942 2591 46896826 46896197 0.000000e+00 778
18 TraesCS7A01G430300 chr7D 89.368 348 24 7 120 466 583331285 583331620 2.380000e-115 425
19 TraesCS7A01G430300 chr7D 89.216 204 17 3 688 891 542825188 542825386 1.540000e-62 250
20 TraesCS7A01G430300 chr7D 90.110 182 16 2 500 680 37750434 37750614 4.310000e-58 235
21 TraesCS7A01G430300 chr5A 95.231 650 28 1 1942 2588 542540860 542541509 0.000000e+00 1026
22 TraesCS7A01G430300 chr6A 94.946 653 30 1 1942 2591 12878278 12878930 0.000000e+00 1020
23 TraesCS7A01G430300 chr6A 92.324 469 32 3 1 467 45862728 45863194 0.000000e+00 664
24 TraesCS7A01G430300 chr6A 90.608 181 16 1 501 680 195270327 195270147 3.330000e-59 239
25 TraesCS7A01G430300 chr1B 90.534 655 53 5 1942 2591 664600981 664600331 0.000000e+00 857
26 TraesCS7A01G430300 chr1B 90.382 655 55 5 1942 2591 646676995 646677646 0.000000e+00 854
27 TraesCS7A01G430300 chr3B 90.551 635 51 5 1941 2570 761580976 761580346 0.000000e+00 832
28 TraesCS7A01G430300 chr3B 85.685 496 36 5 1 466 783885441 783885931 8.330000e-135 490
29 TraesCS7A01G430300 chr6B 90.236 635 54 4 1962 2591 6499282 6499913 0.000000e+00 822
30 TraesCS7A01G430300 chr6B 89.172 471 48 3 1 470 49873893 49874361 3.720000e-163 584
31 TraesCS7A01G430300 chr4A 89.450 654 50 7 1943 2591 702629496 702628857 0.000000e+00 808
32 TraesCS7A01G430300 chr2B 89.457 645 47 9 1951 2590 797241700 797242328 0.000000e+00 795
33 TraesCS7A01G430300 chr2B 90.150 467 45 1 1 466 698101361 698101827 7.930000e-170 606
34 TraesCS7A01G430300 chr2B 90.217 184 17 1 500 682 458962293 458962476 3.330000e-59 239
35 TraesCS7A01G430300 chr1A 96.352 466 17 0 1 466 540058544 540059009 0.000000e+00 767
36 TraesCS7A01G430300 chr6D 91.507 471 36 4 1 470 27200918 27201385 0.000000e+00 645
37 TraesCS7A01G430300 chr6D 89.398 349 23 8 120 466 16859839 16859503 6.630000e-116 427
38 TraesCS7A01G430300 chr3D 89.444 360 25 6 120 478 103371654 103371307 2.370000e-120 442
39 TraesCS7A01G430300 chr3D 90.659 182 15 2 500 680 25460478 25460298 9.260000e-60 241
40 TraesCS7A01G430300 chr3D 89.674 184 19 0 500 683 109842566 109842383 4.310000e-58 235
41 TraesCS7A01G430300 chr2A 81.275 502 54 17 1 466 539969009 539968512 1.130000e-98 370
42 TraesCS7A01G430300 chr4D 88.542 192 20 2 496 685 315271986 315271795 5.580000e-57 231
43 TraesCS7A01G430300 chrUn 87.879 198 20 4 496 690 51492676 51492872 2.010000e-56 230
44 TraesCS7A01G430300 chrUn 87.879 198 20 4 496 690 348959346 348959150 2.010000e-56 230


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G430300 chr7A 624886350 624888940 2590 False 4785.0 4785 100.0000 1 2591 1 chr7A.!!$F2 2590
1 TraesCS7A01G430300 chr7A 624840421 624841514 1093 False 1328.0 1328 88.8190 680 1774 1 chr7A.!!$F1 1094
2 TraesCS7A01G430300 chr7A 624957370 624958507 1137 False 784.0 784 80.4460 697 1774 1 chr7A.!!$F3 1077
3 TraesCS7A01G430300 chr7B 586066994 586068095 1101 False 1195.0 1195 86.7020 682 1774 1 chr7B.!!$F4 1092
4 TraesCS7A01G430300 chr7B 585991623 585992352 729 False 948.0 948 90.4240 822 1537 1 chr7B.!!$F2 715
5 TraesCS7A01G430300 chr7B 585944241 585945534 1293 False 880.5 1602 93.6285 682 1941 2 chr7B.!!$F8 1259
6 TraesCS7A01G430300 chr7B 586116142 586117124 982 False 793.0 793 82.2710 697 1639 1 chr7B.!!$F5 942
7 TraesCS7A01G430300 chr7B 586240663 586241465 802 False 676.0 676 82.7290 987 1774 1 chr7B.!!$F7 787
8 TraesCS7A01G430300 chr7B 586128947 586129490 543 False 396.0 396 80.6860 1113 1638 1 chr7B.!!$F6 525
9 TraesCS7A01G430300 chr7D 542885708 542886785 1077 False 1445.0 1445 90.8200 679 1782 1 chr7D.!!$F2 1103
10 TraesCS7A01G430300 chr7D 542825188 542826918 1730 False 898.0 1546 91.4295 688 1941 2 chr7D.!!$F5 1253
11 TraesCS7A01G430300 chr7D 542957324 542958416 1092 False 824.0 824 81.2500 697 1773 1 chr7D.!!$F3 1076
12 TraesCS7A01G430300 chr7D 46896197 46896826 629 True 778.0 778 88.8550 1942 2591 1 chr7D.!!$R1 649
13 TraesCS7A01G430300 chr5A 542540860 542541509 649 False 1026.0 1026 95.2310 1942 2588 1 chr5A.!!$F1 646
14 TraesCS7A01G430300 chr6A 12878278 12878930 652 False 1020.0 1020 94.9460 1942 2591 1 chr6A.!!$F1 649
15 TraesCS7A01G430300 chr1B 664600331 664600981 650 True 857.0 857 90.5340 1942 2591 1 chr1B.!!$R1 649
16 TraesCS7A01G430300 chr1B 646676995 646677646 651 False 854.0 854 90.3820 1942 2591 1 chr1B.!!$F1 649
17 TraesCS7A01G430300 chr3B 761580346 761580976 630 True 832.0 832 90.5510 1941 2570 1 chr3B.!!$R1 629
18 TraesCS7A01G430300 chr6B 6499282 6499913 631 False 822.0 822 90.2360 1962 2591 1 chr6B.!!$F1 629
19 TraesCS7A01G430300 chr4A 702628857 702629496 639 True 808.0 808 89.4500 1943 2591 1 chr4A.!!$R1 648
20 TraesCS7A01G430300 chr2B 797241700 797242328 628 False 795.0 795 89.4570 1951 2590 1 chr2B.!!$F3 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
285 286 0.109342 GGTGCTGCCTGGTGCTATAT 59.891 55.0 13.23 0.0 42.0 0.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2269 2962 0.61326 TAATGGTTGCCGCTCTCTGT 59.387 50.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.193614 CGCTTGATGCTCGCAGCT 61.194 61.111 8.69 0.00 42.97 4.24
18 19 2.747822 CGCTTGATGCTCGCAGCTT 61.748 57.895 8.69 3.58 42.97 3.74
19 20 1.062206 GCTTGATGCTCGCAGCTTC 59.938 57.895 8.69 13.46 42.97 3.86
20 21 1.347564 CTTGATGCTCGCAGCTTCG 59.652 57.895 8.69 0.00 45.24 3.79
21 22 1.079888 TTGATGCTCGCAGCTTCGA 60.080 52.632 8.47 8.47 45.24 3.71
22 23 0.460811 TTGATGCTCGCAGCTTCGAT 60.461 50.000 9.34 0.00 45.24 3.59
23 24 1.149964 TGATGCTCGCAGCTTCGATG 61.150 55.000 9.34 4.98 45.24 3.84
24 25 0.873312 GATGCTCGCAGCTTCGATGA 60.873 55.000 9.34 0.00 42.97 2.92
25 26 0.875040 ATGCTCGCAGCTTCGATGAG 60.875 55.000 9.34 0.00 42.97 2.90
26 27 2.869256 GCTCGCAGCTTCGATGAGC 61.869 63.158 9.34 5.80 44.37 4.26
33 34 2.984871 GCTTCGATGAGCTTCTCCC 58.015 57.895 1.89 0.00 39.57 4.30
34 35 0.176680 GCTTCGATGAGCTTCTCCCA 59.823 55.000 1.89 0.00 39.57 4.37
35 36 1.805871 GCTTCGATGAGCTTCTCCCAG 60.806 57.143 1.89 0.00 39.57 4.45
36 37 1.480137 CTTCGATGAGCTTCTCCCAGT 59.520 52.381 0.00 0.00 0.00 4.00
37 38 2.437085 TCGATGAGCTTCTCCCAGTA 57.563 50.000 0.00 0.00 0.00 2.74
38 39 2.302260 TCGATGAGCTTCTCCCAGTAG 58.698 52.381 0.00 0.00 0.00 2.57
39 40 1.269517 CGATGAGCTTCTCCCAGTAGC 60.270 57.143 0.00 0.00 38.69 3.58
40 41 1.759445 GATGAGCTTCTCCCAGTAGCA 59.241 52.381 5.13 0.00 40.54 3.49
41 42 1.644509 TGAGCTTCTCCCAGTAGCAA 58.355 50.000 5.13 0.00 40.54 3.91
42 43 1.977854 TGAGCTTCTCCCAGTAGCAAA 59.022 47.619 5.13 0.00 40.54 3.68
43 44 2.573462 TGAGCTTCTCCCAGTAGCAAAT 59.427 45.455 5.13 0.00 40.54 2.32
44 45 2.941720 GAGCTTCTCCCAGTAGCAAATG 59.058 50.000 5.13 0.00 40.54 2.32
45 46 1.403323 GCTTCTCCCAGTAGCAAATGC 59.597 52.381 0.00 0.00 38.34 3.56
68 69 3.360340 GGCATCGCCCATAGCAGC 61.360 66.667 0.00 0.00 44.06 5.25
69 70 2.281345 GCATCGCCCATAGCAGCT 60.281 61.111 0.00 0.00 44.04 4.24
70 71 2.323580 GCATCGCCCATAGCAGCTC 61.324 63.158 0.00 0.00 44.04 4.09
71 72 2.025969 CATCGCCCATAGCAGCTCG 61.026 63.158 0.00 0.00 44.04 5.03
72 73 3.873026 ATCGCCCATAGCAGCTCGC 62.873 63.158 0.00 0.00 44.04 5.03
73 74 4.897357 CGCCCATAGCAGCTCGCA 62.897 66.667 0.00 0.00 46.13 5.10
74 75 2.971413 GCCCATAGCAGCTCGCAG 60.971 66.667 0.00 0.00 46.13 5.18
75 76 2.503061 CCCATAGCAGCTCGCAGT 59.497 61.111 0.00 0.00 46.13 4.40
76 77 1.593750 CCCATAGCAGCTCGCAGTC 60.594 63.158 0.00 0.00 46.13 3.51
77 78 1.440893 CCATAGCAGCTCGCAGTCT 59.559 57.895 0.00 0.00 46.13 3.24
78 79 0.597118 CCATAGCAGCTCGCAGTCTC 60.597 60.000 0.00 0.00 46.13 3.36
79 80 0.597118 CATAGCAGCTCGCAGTCTCC 60.597 60.000 0.00 0.00 46.13 3.71
80 81 1.743321 ATAGCAGCTCGCAGTCTCCC 61.743 60.000 0.00 0.00 46.13 4.30
81 82 4.828925 GCAGCTCGCAGTCTCCCC 62.829 72.222 3.64 0.00 41.79 4.81
82 83 4.154347 CAGCTCGCAGTCTCCCCC 62.154 72.222 0.00 0.00 0.00 5.40
85 86 3.827898 CTCGCAGTCTCCCCCGTC 61.828 72.222 0.00 0.00 0.00 4.79
88 89 3.462678 GCAGTCTCCCCCGTCCTC 61.463 72.222 0.00 0.00 0.00 3.71
89 90 3.141488 CAGTCTCCCCCGTCCTCG 61.141 72.222 0.00 0.00 0.00 4.63
90 91 3.659496 AGTCTCCCCCGTCCTCGT 61.659 66.667 0.00 0.00 35.01 4.18
91 92 3.139469 GTCTCCCCCGTCCTCGTC 61.139 72.222 0.00 0.00 35.01 4.20
92 93 3.336568 TCTCCCCCGTCCTCGTCT 61.337 66.667 0.00 0.00 35.01 4.18
93 94 3.141488 CTCCCCCGTCCTCGTCTG 61.141 72.222 0.00 0.00 35.01 3.51
105 106 3.458163 CGTCTGCCCCCGAGCTTA 61.458 66.667 0.00 0.00 0.00 3.09
106 107 2.797278 CGTCTGCCCCCGAGCTTAT 61.797 63.158 0.00 0.00 0.00 1.73
107 108 1.461091 CGTCTGCCCCCGAGCTTATA 61.461 60.000 0.00 0.00 0.00 0.98
108 109 0.756903 GTCTGCCCCCGAGCTTATAA 59.243 55.000 0.00 0.00 0.00 0.98
109 110 1.048601 TCTGCCCCCGAGCTTATAAG 58.951 55.000 8.20 8.20 0.00 1.73
119 120 1.581447 GCTTATAAGCCATGGCGCC 59.419 57.895 30.50 22.73 46.20 6.53
120 121 1.866853 GCTTATAAGCCATGGCGCCC 61.867 60.000 30.50 8.39 46.20 6.13
122 123 0.112218 TTATAAGCCATGGCGCCCAT 59.888 50.000 30.50 22.08 46.37 4.00
123 124 0.988063 TATAAGCCATGGCGCCCATA 59.012 50.000 30.50 21.13 43.15 2.74
124 125 0.112218 ATAAGCCATGGCGCCCATAA 59.888 50.000 30.50 4.98 43.15 1.90
125 126 0.821711 TAAGCCATGGCGCCCATAAC 60.822 55.000 30.50 9.88 43.15 1.89
126 127 2.832661 GCCATGGCGCCCATAACA 60.833 61.111 26.77 3.54 43.15 2.41
127 128 2.848858 GCCATGGCGCCCATAACAG 61.849 63.158 26.77 6.66 43.15 3.16
128 129 2.723746 CATGGCGCCCATAACAGC 59.276 61.111 26.77 0.00 43.15 4.40
129 130 1.825191 CATGGCGCCCATAACAGCT 60.825 57.895 26.77 0.00 43.15 4.24
130 131 1.526917 ATGGCGCCCATAACAGCTC 60.527 57.895 26.77 0.00 43.19 4.09
131 132 3.272334 GGCGCCCATAACAGCTCG 61.272 66.667 18.11 0.00 0.00 5.03
132 133 2.511600 GCGCCCATAACAGCTCGT 60.512 61.111 0.00 0.00 0.00 4.18
133 134 1.227147 GCGCCCATAACAGCTCGTA 60.227 57.895 0.00 0.00 0.00 3.43
134 135 1.215655 GCGCCCATAACAGCTCGTAG 61.216 60.000 0.00 0.00 0.00 3.51
135 136 0.597637 CGCCCATAACAGCTCGTAGG 60.598 60.000 0.00 0.00 0.00 3.18
136 137 0.750850 GCCCATAACAGCTCGTAGGA 59.249 55.000 0.00 0.00 0.00 2.94
137 138 1.269831 GCCCATAACAGCTCGTAGGAG 60.270 57.143 8.10 8.10 43.46 3.69
145 146 3.217743 CTCGTAGGAGCCCCCGTC 61.218 72.222 0.00 0.00 40.87 4.79
168 169 4.570663 CCGCCCCGAGCTCGTAAG 62.571 72.222 32.41 21.40 40.39 2.34
177 178 3.272334 GCTCGTAAGCCATGGCCG 61.272 66.667 33.14 27.51 43.10 6.13
178 179 3.272334 CTCGTAAGCCATGGCCGC 61.272 66.667 33.14 21.03 43.17 6.53
179 180 4.849310 TCGTAAGCCATGGCCGCC 62.849 66.667 33.14 18.89 43.17 6.13
193 194 4.821589 CGCCCGGACCTTGAGCTC 62.822 72.222 6.82 6.82 0.00 4.09
194 195 4.821589 GCCCGGACCTTGAGCTCG 62.822 72.222 9.64 0.00 0.00 5.03
195 196 4.821589 CCCGGACCTTGAGCTCGC 62.822 72.222 9.64 0.00 0.00 5.03
196 197 4.069232 CCGGACCTTGAGCTCGCA 62.069 66.667 9.64 0.00 0.00 5.10
197 198 2.507992 CGGACCTTGAGCTCGCAG 60.508 66.667 9.64 7.49 0.00 5.18
198 199 2.125350 GGACCTTGAGCTCGCAGG 60.125 66.667 24.09 24.09 0.00 4.85
199 200 2.817396 GACCTTGAGCTCGCAGGC 60.817 66.667 25.15 16.65 0.00 4.85
200 201 4.400961 ACCTTGAGCTCGCAGGCC 62.401 66.667 25.15 0.00 0.00 5.19
201 202 4.399395 CCTTGAGCTCGCAGGCCA 62.399 66.667 16.74 0.00 0.00 5.36
202 203 2.124819 CTTGAGCTCGCAGGCCAT 60.125 61.111 5.01 0.00 0.00 4.40
203 204 2.437180 TTGAGCTCGCAGGCCATG 60.437 61.111 5.01 0.97 0.00 3.66
204 205 3.982316 TTGAGCTCGCAGGCCATGG 62.982 63.158 7.63 7.63 0.00 3.66
217 218 2.124193 CATGGCGGATGGGAGCAA 60.124 61.111 0.00 0.00 34.54 3.91
218 219 2.124151 ATGGCGGATGGGAGCAAC 60.124 61.111 0.00 0.00 34.54 4.17
219 220 2.982643 ATGGCGGATGGGAGCAACA 61.983 57.895 0.00 0.00 34.54 3.33
220 221 3.134127 GGCGGATGGGAGCAACAC 61.134 66.667 0.00 0.00 34.54 3.32
221 222 3.134127 GCGGATGGGAGCAACACC 61.134 66.667 0.00 0.00 0.00 4.16
222 223 2.438434 CGGATGGGAGCAACACCC 60.438 66.667 0.00 0.00 46.87 4.61
223 224 2.043953 GGATGGGAGCAACACCCC 60.044 66.667 0.00 0.00 46.21 4.95
224 225 2.043953 GATGGGAGCAACACCCCC 60.044 66.667 0.00 0.00 46.21 5.40
226 227 2.863484 TGGGAGCAACACCCCCAT 60.863 61.111 0.00 0.00 44.67 4.00
227 228 2.362889 GGGAGCAACACCCCCATG 60.363 66.667 0.00 0.00 41.38 3.66
228 229 2.362889 GGAGCAACACCCCCATGG 60.363 66.667 4.14 4.14 41.37 3.66
229 230 2.763215 GAGCAACACCCCCATGGA 59.237 61.111 15.22 0.00 38.00 3.41
230 231 1.379044 GAGCAACACCCCCATGGAG 60.379 63.158 15.22 6.77 38.00 3.86
231 232 2.362889 GCAACACCCCCATGGAGG 60.363 66.667 15.22 13.28 38.00 4.30
232 233 2.917897 GCAACACCCCCATGGAGGA 61.918 63.158 21.01 0.00 41.22 3.71
233 234 1.304282 CAACACCCCCATGGAGGAG 59.696 63.158 21.01 14.30 41.22 3.69
234 235 1.930656 AACACCCCCATGGAGGAGG 60.931 63.158 21.01 12.91 41.22 4.30
235 236 2.286425 CACCCCCATGGAGGAGGT 60.286 66.667 21.01 14.08 41.22 3.85
236 237 2.286425 ACCCCCATGGAGGAGGTG 60.286 66.667 21.01 5.61 41.22 4.00
237 238 3.813724 CCCCCATGGAGGAGGTGC 61.814 72.222 15.22 0.00 41.22 5.01
238 239 3.016971 CCCCATGGAGGAGGTGCA 61.017 66.667 15.22 0.00 41.22 4.57
239 240 2.593978 CCCATGGAGGAGGTGCAG 59.406 66.667 15.22 0.00 41.22 4.41
240 241 2.124403 CCATGGAGGAGGTGCAGC 60.124 66.667 5.56 8.11 41.22 5.25
241 242 2.672908 CATGGAGGAGGTGCAGCA 59.327 61.111 19.63 0.00 0.00 4.41
242 243 1.226542 CATGGAGGAGGTGCAGCAT 59.773 57.895 19.63 3.06 0.00 3.79
243 244 1.101635 CATGGAGGAGGTGCAGCATG 61.102 60.000 19.63 7.93 40.87 4.06
244 245 1.276859 ATGGAGGAGGTGCAGCATGA 61.277 55.000 19.63 0.00 39.69 3.07
245 246 1.153208 GGAGGAGGTGCAGCATGAG 60.153 63.158 19.63 0.00 39.69 2.90
246 247 1.153208 GAGGAGGTGCAGCATGAGG 60.153 63.158 19.63 0.00 39.69 3.86
247 248 1.908340 GAGGAGGTGCAGCATGAGGT 61.908 60.000 19.63 0.00 39.69 3.85
248 249 1.748122 GGAGGTGCAGCATGAGGTG 60.748 63.158 19.63 0.00 45.83 4.00
256 257 2.825836 GCATGAGGTGCGAAGGGG 60.826 66.667 0.00 0.00 45.23 4.79
257 258 2.124570 CATGAGGTGCGAAGGGGG 60.125 66.667 0.00 0.00 0.00 5.40
272 273 4.767255 GGGGAGTGCTCGGTGCTG 62.767 72.222 3.53 0.00 43.37 4.41
275 276 4.385405 GAGTGCTCGGTGCTGCCT 62.385 66.667 0.00 0.00 43.37 4.75
276 277 4.694233 AGTGCTCGGTGCTGCCTG 62.694 66.667 0.00 0.00 43.37 4.85
282 283 4.393155 CGGTGCTGCCTGGTGCTA 62.393 66.667 13.23 0.59 42.00 3.49
283 284 2.273449 GGTGCTGCCTGGTGCTAT 59.727 61.111 13.23 0.00 42.00 2.97
284 285 1.526887 GGTGCTGCCTGGTGCTATA 59.473 57.895 13.23 0.00 42.00 1.31
285 286 0.109342 GGTGCTGCCTGGTGCTATAT 59.891 55.000 13.23 0.00 42.00 0.86
286 287 1.477558 GGTGCTGCCTGGTGCTATATT 60.478 52.381 13.23 0.00 42.00 1.28
287 288 1.605710 GTGCTGCCTGGTGCTATATTG 59.394 52.381 13.23 0.00 42.00 1.90
288 289 1.242076 GCTGCCTGGTGCTATATTGG 58.758 55.000 0.00 0.00 42.00 3.16
289 290 1.202806 GCTGCCTGGTGCTATATTGGA 60.203 52.381 0.00 0.00 42.00 3.53
290 291 2.775890 CTGCCTGGTGCTATATTGGAG 58.224 52.381 0.00 0.00 42.00 3.86
291 292 1.421268 TGCCTGGTGCTATATTGGAGG 59.579 52.381 0.00 0.00 42.00 4.30
292 293 1.699634 GCCTGGTGCTATATTGGAGGA 59.300 52.381 0.00 0.00 36.87 3.71
293 294 2.289945 GCCTGGTGCTATATTGGAGGAG 60.290 54.545 0.00 0.00 36.87 3.69
294 295 2.304180 CCTGGTGCTATATTGGAGGAGG 59.696 54.545 0.00 0.00 0.00 4.30
295 296 1.699634 TGGTGCTATATTGGAGGAGGC 59.300 52.381 0.00 0.00 0.00 4.70
296 297 1.338200 GGTGCTATATTGGAGGAGGCG 60.338 57.143 0.00 0.00 0.00 5.52
297 298 1.618837 GTGCTATATTGGAGGAGGCGA 59.381 52.381 0.00 0.00 0.00 5.54
298 299 1.895798 TGCTATATTGGAGGAGGCGAG 59.104 52.381 0.00 0.00 0.00 5.03
299 300 1.205893 GCTATATTGGAGGAGGCGAGG 59.794 57.143 0.00 0.00 0.00 4.63
300 301 1.205893 CTATATTGGAGGAGGCGAGGC 59.794 57.143 0.00 0.00 0.00 4.70
301 302 1.821061 ATATTGGAGGAGGCGAGGCG 61.821 60.000 0.00 0.00 0.00 5.52
305 306 3.771160 GAGGAGGCGAGGCGGAAA 61.771 66.667 0.00 0.00 0.00 3.13
306 307 4.083862 AGGAGGCGAGGCGGAAAC 62.084 66.667 0.00 0.00 0.00 2.78
307 308 4.388499 GGAGGCGAGGCGGAAACA 62.388 66.667 0.00 0.00 0.00 2.83
308 309 2.815647 GAGGCGAGGCGGAAACAG 60.816 66.667 0.00 0.00 0.00 3.16
309 310 3.296709 GAGGCGAGGCGGAAACAGA 62.297 63.158 0.00 0.00 0.00 3.41
310 311 2.125106 GGCGAGGCGGAAACAGAT 60.125 61.111 0.00 0.00 0.00 2.90
311 312 1.143183 GGCGAGGCGGAAACAGATA 59.857 57.895 0.00 0.00 0.00 1.98
312 313 0.249911 GGCGAGGCGGAAACAGATAT 60.250 55.000 0.00 0.00 0.00 1.63
313 314 0.861837 GCGAGGCGGAAACAGATATG 59.138 55.000 0.00 0.00 0.00 1.78
314 315 1.502231 CGAGGCGGAAACAGATATGG 58.498 55.000 0.00 0.00 0.00 2.74
315 316 1.068588 CGAGGCGGAAACAGATATGGA 59.931 52.381 0.00 0.00 0.00 3.41
316 317 2.483013 CGAGGCGGAAACAGATATGGAA 60.483 50.000 0.00 0.00 0.00 3.53
317 318 3.541632 GAGGCGGAAACAGATATGGAAA 58.458 45.455 0.00 0.00 0.00 3.13
318 319 3.545703 AGGCGGAAACAGATATGGAAAG 58.454 45.455 0.00 0.00 0.00 2.62
319 320 2.033424 GGCGGAAACAGATATGGAAAGC 59.967 50.000 0.00 0.00 0.00 3.51
320 321 2.286418 GCGGAAACAGATATGGAAAGCG 60.286 50.000 0.00 0.00 0.00 4.68
321 322 3.194861 CGGAAACAGATATGGAAAGCGA 58.805 45.455 0.00 0.00 0.00 4.93
322 323 3.246226 CGGAAACAGATATGGAAAGCGAG 59.754 47.826 0.00 0.00 0.00 5.03
323 324 3.561725 GGAAACAGATATGGAAAGCGAGG 59.438 47.826 0.00 0.00 0.00 4.63
324 325 3.914426 AACAGATATGGAAAGCGAGGT 57.086 42.857 0.00 0.00 0.00 3.85
325 326 3.460857 ACAGATATGGAAAGCGAGGTC 57.539 47.619 0.00 0.00 0.00 3.85
326 327 2.766263 ACAGATATGGAAAGCGAGGTCA 59.234 45.455 0.00 0.00 0.00 4.02
327 328 3.126831 CAGATATGGAAAGCGAGGTCAC 58.873 50.000 0.00 0.00 0.00 3.67
328 329 2.128035 GATATGGAAAGCGAGGTCACG 58.872 52.381 0.00 0.00 0.00 4.35
329 330 0.174845 TATGGAAAGCGAGGTCACGG 59.825 55.000 0.00 0.00 0.00 4.94
330 331 3.119096 GGAAAGCGAGGTCACGGC 61.119 66.667 0.00 0.00 0.00 5.68
331 332 3.119096 GAAAGCGAGGTCACGGCC 61.119 66.667 0.00 0.00 0.00 6.13
349 350 2.743195 CGCGAGGAAGAAGAAGTGG 58.257 57.895 0.00 0.00 0.00 4.00
350 351 0.243907 CGCGAGGAAGAAGAAGTGGA 59.756 55.000 0.00 0.00 0.00 4.02
351 352 1.134965 CGCGAGGAAGAAGAAGTGGAT 60.135 52.381 0.00 0.00 0.00 3.41
352 353 2.275318 GCGAGGAAGAAGAAGTGGATG 58.725 52.381 0.00 0.00 0.00 3.51
353 354 2.275318 CGAGGAAGAAGAAGTGGATGC 58.725 52.381 0.00 0.00 0.00 3.91
354 355 2.275318 GAGGAAGAAGAAGTGGATGCG 58.725 52.381 0.00 0.00 0.00 4.73
355 356 1.065854 AGGAAGAAGAAGTGGATGCGG 60.066 52.381 0.00 0.00 0.00 5.69
356 357 1.373570 GAAGAAGAAGTGGATGCGGG 58.626 55.000 0.00 0.00 0.00 6.13
357 358 0.678048 AAGAAGAAGTGGATGCGGGC 60.678 55.000 0.00 0.00 0.00 6.13
358 359 2.436646 AAGAAGTGGATGCGGGCG 60.437 61.111 0.00 0.00 0.00 6.13
359 360 3.254024 AAGAAGTGGATGCGGGCGT 62.254 57.895 0.00 0.00 0.00 5.68
360 361 2.746277 GAAGTGGATGCGGGCGTT 60.746 61.111 0.00 0.00 0.00 4.84
361 362 3.039202 GAAGTGGATGCGGGCGTTG 62.039 63.158 0.00 0.00 0.00 4.10
370 371 3.702048 CGGGCGTTGGGGAGAAGA 61.702 66.667 0.00 0.00 0.00 2.87
371 372 2.998949 GGGCGTTGGGGAGAAGAT 59.001 61.111 0.00 0.00 0.00 2.40
372 373 1.682451 CGGGCGTTGGGGAGAAGATA 61.682 60.000 0.00 0.00 0.00 1.98
373 374 0.544697 GGGCGTTGGGGAGAAGATAA 59.455 55.000 0.00 0.00 0.00 1.75
374 375 1.475213 GGGCGTTGGGGAGAAGATAAG 60.475 57.143 0.00 0.00 0.00 1.73
375 376 1.475213 GGCGTTGGGGAGAAGATAAGG 60.475 57.143 0.00 0.00 0.00 2.69
376 377 1.209747 GCGTTGGGGAGAAGATAAGGT 59.790 52.381 0.00 0.00 0.00 3.50
377 378 2.433239 GCGTTGGGGAGAAGATAAGGTA 59.567 50.000 0.00 0.00 0.00 3.08
378 379 3.740452 GCGTTGGGGAGAAGATAAGGTAC 60.740 52.174 0.00 0.00 0.00 3.34
379 380 3.449737 CGTTGGGGAGAAGATAAGGTACA 59.550 47.826 0.00 0.00 0.00 2.90
380 381 4.679905 CGTTGGGGAGAAGATAAGGTACAC 60.680 50.000 0.00 0.00 0.00 2.90
381 382 3.028850 TGGGGAGAAGATAAGGTACACG 58.971 50.000 0.00 0.00 0.00 4.49
382 383 3.029570 GGGGAGAAGATAAGGTACACGT 58.970 50.000 0.00 0.00 0.00 4.49
383 384 3.181478 GGGGAGAAGATAAGGTACACGTG 60.181 52.174 15.48 15.48 0.00 4.49
384 385 3.181478 GGGAGAAGATAAGGTACACGTGG 60.181 52.174 21.57 1.66 0.00 4.94
385 386 3.446516 GGAGAAGATAAGGTACACGTGGT 59.553 47.826 21.57 8.16 0.00 4.16
386 387 4.439837 GGAGAAGATAAGGTACACGTGGTC 60.440 50.000 21.57 11.86 0.00 4.02
387 388 3.446516 AGAAGATAAGGTACACGTGGTCC 59.553 47.826 21.57 20.10 0.00 4.46
388 389 2.105766 AGATAAGGTACACGTGGTCCC 58.894 52.381 21.57 15.67 0.00 4.46
389 390 2.105766 GATAAGGTACACGTGGTCCCT 58.894 52.381 21.57 17.68 0.00 4.20
390 391 2.014010 TAAGGTACACGTGGTCCCTT 57.986 50.000 27.55 27.55 0.00 3.95
391 392 0.683412 AAGGTACACGTGGTCCCTTC 59.317 55.000 21.57 2.08 0.00 3.46
392 393 1.190178 AGGTACACGTGGTCCCTTCC 61.190 60.000 21.57 5.58 0.00 3.46
393 394 1.190178 GGTACACGTGGTCCCTTCCT 61.190 60.000 21.57 0.00 0.00 3.36
394 395 1.549203 GTACACGTGGTCCCTTCCTA 58.451 55.000 21.57 0.00 0.00 2.94
395 396 1.475682 GTACACGTGGTCCCTTCCTAG 59.524 57.143 21.57 0.00 0.00 3.02
396 397 0.178941 ACACGTGGTCCCTTCCTAGT 60.179 55.000 21.57 0.00 0.00 2.57
397 398 0.246635 CACGTGGTCCCTTCCTAGTG 59.753 60.000 7.95 0.00 32.87 2.74
398 399 0.903454 ACGTGGTCCCTTCCTAGTGG 60.903 60.000 0.00 0.00 0.00 4.00
399 400 1.602771 GTGGTCCCTTCCTAGTGGC 59.397 63.158 0.00 0.00 0.00 5.01
400 401 0.910088 GTGGTCCCTTCCTAGTGGCT 60.910 60.000 0.00 0.00 0.00 4.75
401 402 0.714180 TGGTCCCTTCCTAGTGGCTA 59.286 55.000 0.00 0.00 0.00 3.93
402 403 1.343075 TGGTCCCTTCCTAGTGGCTAG 60.343 57.143 0.00 0.00 34.16 3.42
403 404 0.753867 GTCCCTTCCTAGTGGCTAGC 59.246 60.000 6.04 6.04 33.12 3.42
404 405 0.755698 TCCCTTCCTAGTGGCTAGCG 60.756 60.000 9.00 0.00 33.12 4.26
405 406 1.068250 CCTTCCTAGTGGCTAGCGC 59.932 63.158 9.00 0.00 33.12 5.92
422 423 3.414700 CCAGCGTGGCGAAGTGAC 61.415 66.667 0.00 0.00 0.00 3.67
423 424 3.414700 CAGCGTGGCGAAGTGACC 61.415 66.667 0.00 0.00 0.00 4.02
431 432 4.796231 CGAAGTGACCGGCCCGAG 62.796 72.222 3.71 0.00 0.00 4.63
461 462 4.358570 GCACCGCGCGTAAACGTT 62.359 61.111 29.95 0.00 42.22 3.99
462 463 2.246108 CACCGCGCGTAAACGTTT 59.754 55.556 29.95 18.90 42.22 3.60
463 464 1.785533 CACCGCGCGTAAACGTTTC 60.786 57.895 29.95 8.47 42.22 2.78
464 465 2.202083 CCGCGCGTAAACGTTTCC 60.202 61.111 29.95 4.94 42.22 3.13
465 466 2.202083 CGCGCGTAAACGTTTCCC 60.202 61.111 24.19 8.62 42.22 3.97
466 467 2.937486 GCGCGTAAACGTTTCCCA 59.063 55.556 18.42 0.00 42.22 4.37
467 468 1.279238 GCGCGTAAACGTTTCCCAA 59.721 52.632 18.42 0.00 42.22 4.12
468 469 0.316854 GCGCGTAAACGTTTCCCAAA 60.317 50.000 18.42 0.00 42.22 3.28
469 470 1.859197 GCGCGTAAACGTTTCCCAAAA 60.859 47.619 18.42 0.00 42.22 2.44
470 471 2.038367 CGCGTAAACGTTTCCCAAAAG 58.962 47.619 18.42 3.02 42.22 2.27
471 472 2.387185 GCGTAAACGTTTCCCAAAAGG 58.613 47.619 18.42 5.71 42.22 3.11
472 473 2.859419 GCGTAAACGTTTCCCAAAAGGG 60.859 50.000 18.42 0.00 42.22 3.95
473 474 2.358582 CGTAAACGTTTCCCAAAAGGGT 59.641 45.455 18.42 0.00 35.15 4.34
474 475 3.563390 CGTAAACGTTTCCCAAAAGGGTA 59.437 43.478 18.42 0.00 35.15 3.69
475 476 4.036144 CGTAAACGTTTCCCAAAAGGGTAA 59.964 41.667 18.42 0.00 35.15 2.85
476 477 4.659111 AAACGTTTCCCAAAAGGGTAAG 57.341 40.909 7.96 0.00 35.15 2.34
477 478 2.589720 ACGTTTCCCAAAAGGGTAAGG 58.410 47.619 9.96 9.96 35.15 2.69
478 479 1.890489 CGTTTCCCAAAAGGGTAAGGG 59.110 52.381 0.00 0.00 42.86 3.95
479 480 1.621814 GTTTCCCAAAAGGGTAAGGGC 59.378 52.381 0.00 0.00 41.22 5.19
480 481 0.861155 TTCCCAAAAGGGTAAGGGCA 59.139 50.000 0.00 0.00 41.22 5.36
481 482 0.113580 TCCCAAAAGGGTAAGGGCAC 59.886 55.000 0.00 0.00 41.22 5.01
482 483 1.248101 CCCAAAAGGGTAAGGGCACG 61.248 60.000 0.00 0.00 33.91 5.34
483 484 1.584495 CAAAAGGGTAAGGGCACGC 59.416 57.895 0.00 0.00 0.00 5.34
484 485 1.151908 AAAAGGGTAAGGGCACGCA 59.848 52.632 0.00 0.00 34.01 5.24
485 486 0.893727 AAAAGGGTAAGGGCACGCAG 60.894 55.000 0.00 0.00 34.01 5.18
504 505 3.679389 CAGTGATCTGCTTAAAGGGTGT 58.321 45.455 0.00 0.00 34.79 4.16
505 506 4.074970 CAGTGATCTGCTTAAAGGGTGTT 58.925 43.478 0.00 0.00 34.79 3.32
506 507 4.520492 CAGTGATCTGCTTAAAGGGTGTTT 59.480 41.667 0.00 0.00 34.79 2.83
507 508 4.520492 AGTGATCTGCTTAAAGGGTGTTTG 59.480 41.667 0.00 0.00 0.00 2.93
508 509 3.826157 TGATCTGCTTAAAGGGTGTTTGG 59.174 43.478 0.00 0.00 0.00 3.28
509 510 3.306472 TCTGCTTAAAGGGTGTTTGGT 57.694 42.857 0.00 0.00 0.00 3.67
510 511 3.637769 TCTGCTTAAAGGGTGTTTGGTT 58.362 40.909 0.00 0.00 0.00 3.67
511 512 4.027437 TCTGCTTAAAGGGTGTTTGGTTT 58.973 39.130 0.00 0.00 0.00 3.27
512 513 4.098807 TCTGCTTAAAGGGTGTTTGGTTTC 59.901 41.667 0.00 0.00 0.00 2.78
513 514 3.769844 TGCTTAAAGGGTGTTTGGTTTCA 59.230 39.130 0.00 0.00 0.00 2.69
514 515 4.142049 TGCTTAAAGGGTGTTTGGTTTCAG 60.142 41.667 0.00 0.00 0.00 3.02
515 516 4.739436 GCTTAAAGGGTGTTTGGTTTCAGG 60.739 45.833 0.00 0.00 0.00 3.86
516 517 1.788229 AAGGGTGTTTGGTTTCAGGG 58.212 50.000 0.00 0.00 0.00 4.45
517 518 0.930726 AGGGTGTTTGGTTTCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
518 519 1.037493 GGGTGTTTGGTTTCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
519 520 1.411074 GGGTGTTTGGTTTCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
520 521 2.384828 GGTGTTTGGTTTCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
521 522 2.764010 GGTGTTTGGTTTCAGGGACTTT 59.236 45.455 0.00 0.00 34.60 2.66
522 523 3.196901 GGTGTTTGGTTTCAGGGACTTTT 59.803 43.478 0.00 0.00 34.60 2.27
523 524 4.323180 GGTGTTTGGTTTCAGGGACTTTTT 60.323 41.667 0.00 0.00 34.60 1.94
551 552 8.773404 TGTTAGGACTAGAAAAAGTTCATAGC 57.227 34.615 0.00 0.00 36.09 2.97
552 553 8.372459 TGTTAGGACTAGAAAAAGTTCATAGCA 58.628 33.333 0.00 0.00 36.09 3.49
553 554 9.216117 GTTAGGACTAGAAAAAGTTCATAGCAA 57.784 33.333 0.00 0.00 36.09 3.91
554 555 9.787435 TTAGGACTAGAAAAAGTTCATAGCAAA 57.213 29.630 0.00 0.00 36.09 3.68
555 556 8.870075 AGGACTAGAAAAAGTTCATAGCAAAT 57.130 30.769 0.00 0.00 36.09 2.32
556 557 8.951243 AGGACTAGAAAAAGTTCATAGCAAATC 58.049 33.333 0.00 0.00 36.09 2.17
557 558 8.730680 GGACTAGAAAAAGTTCATAGCAAATCA 58.269 33.333 0.00 0.00 36.09 2.57
562 563 9.598517 AGAAAAAGTTCATAGCAAATCAAACAA 57.401 25.926 0.00 0.00 36.09 2.83
563 564 9.853921 GAAAAAGTTCATAGCAAATCAAACAAG 57.146 29.630 0.00 0.00 33.61 3.16
564 565 7.951530 AAAGTTCATAGCAAATCAAACAAGG 57.048 32.000 0.00 0.00 0.00 3.61
565 566 6.655078 AGTTCATAGCAAATCAAACAAGGT 57.345 33.333 0.00 0.00 0.00 3.50
566 567 6.449698 AGTTCATAGCAAATCAAACAAGGTG 58.550 36.000 0.00 0.00 0.00 4.00
567 568 5.389859 TCATAGCAAATCAAACAAGGTGG 57.610 39.130 0.00 0.00 0.00 4.61
568 569 4.220382 TCATAGCAAATCAAACAAGGTGGG 59.780 41.667 0.00 0.00 0.00 4.61
569 570 2.676748 AGCAAATCAAACAAGGTGGGA 58.323 42.857 0.00 0.00 0.00 4.37
570 571 3.242011 AGCAAATCAAACAAGGTGGGAT 58.758 40.909 0.00 0.00 0.00 3.85
571 572 3.647590 AGCAAATCAAACAAGGTGGGATT 59.352 39.130 0.00 0.00 0.00 3.01
572 573 4.102996 AGCAAATCAAACAAGGTGGGATTT 59.897 37.500 0.00 0.00 38.36 2.17
573 574 4.821260 GCAAATCAAACAAGGTGGGATTTT 59.179 37.500 0.00 0.00 36.38 1.82
574 575 5.299028 GCAAATCAAACAAGGTGGGATTTTT 59.701 36.000 0.00 0.00 36.38 1.94
575 576 6.513230 GCAAATCAAACAAGGTGGGATTTTTC 60.513 38.462 0.00 0.00 36.38 2.29
576 577 6.499106 AATCAAACAAGGTGGGATTTTTCT 57.501 33.333 0.00 0.00 0.00 2.52
577 578 5.275067 TCAAACAAGGTGGGATTTTTCTG 57.725 39.130 0.00 0.00 0.00 3.02
578 579 4.959210 TCAAACAAGGTGGGATTTTTCTGA 59.041 37.500 0.00 0.00 0.00 3.27
579 580 5.068987 TCAAACAAGGTGGGATTTTTCTGAG 59.931 40.000 0.00 0.00 0.00 3.35
580 581 4.453480 ACAAGGTGGGATTTTTCTGAGA 57.547 40.909 0.00 0.00 0.00 3.27
581 582 4.145052 ACAAGGTGGGATTTTTCTGAGAC 58.855 43.478 0.00 0.00 0.00 3.36
582 583 4.141158 ACAAGGTGGGATTTTTCTGAGACT 60.141 41.667 0.00 0.00 0.00 3.24
583 584 4.731313 AGGTGGGATTTTTCTGAGACTT 57.269 40.909 0.00 0.00 0.00 3.01
584 585 5.066913 AGGTGGGATTTTTCTGAGACTTT 57.933 39.130 0.00 0.00 0.00 2.66
585 586 5.458595 AGGTGGGATTTTTCTGAGACTTTT 58.541 37.500 0.00 0.00 0.00 2.27
586 587 5.899547 AGGTGGGATTTTTCTGAGACTTTTT 59.100 36.000 0.00 0.00 0.00 1.94
587 588 5.985530 GGTGGGATTTTTCTGAGACTTTTTG 59.014 40.000 0.00 0.00 0.00 2.44
588 589 5.463392 GTGGGATTTTTCTGAGACTTTTTGC 59.537 40.000 0.00 0.00 0.00 3.68
589 590 5.363580 TGGGATTTTTCTGAGACTTTTTGCT 59.636 36.000 0.00 0.00 0.00 3.91
590 591 6.549364 TGGGATTTTTCTGAGACTTTTTGCTA 59.451 34.615 0.00 0.00 0.00 3.49
591 592 7.069331 TGGGATTTTTCTGAGACTTTTTGCTAA 59.931 33.333 0.00 0.00 0.00 3.09
592 593 7.926018 GGGATTTTTCTGAGACTTTTTGCTAAA 59.074 33.333 0.00 0.00 0.00 1.85
593 594 9.313118 GGATTTTTCTGAGACTTTTTGCTAAAA 57.687 29.630 5.93 5.93 0.00 1.52
605 606 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
606 607 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
607 608 5.941948 TTGCTAAAAGTCCTTAGAAGCAC 57.058 39.130 9.21 0.00 31.59 4.40
608 609 5.228945 TGCTAAAAGTCCTTAGAAGCACT 57.771 39.130 6.73 0.00 31.59 4.40
609 610 5.621193 TGCTAAAAGTCCTTAGAAGCACTT 58.379 37.500 0.00 0.00 31.59 3.16
610 611 5.701290 TGCTAAAAGTCCTTAGAAGCACTTC 59.299 40.000 0.00 2.04 39.78 3.01
611 612 5.122554 GCTAAAAGTCCTTAGAAGCACTTCC 59.877 44.000 6.77 0.00 40.33 3.46
612 613 4.984146 AAAGTCCTTAGAAGCACTTCCT 57.016 40.909 6.77 0.00 40.33 3.36
613 614 4.545208 AAGTCCTTAGAAGCACTTCCTC 57.455 45.455 6.77 0.00 40.33 3.71
614 615 3.511477 AGTCCTTAGAAGCACTTCCTCA 58.489 45.455 6.77 0.00 40.33 3.86
615 616 3.904339 AGTCCTTAGAAGCACTTCCTCAA 59.096 43.478 6.77 0.00 40.33 3.02
616 617 4.020662 AGTCCTTAGAAGCACTTCCTCAAG 60.021 45.833 6.77 8.00 40.33 3.02
617 618 4.021016 GTCCTTAGAAGCACTTCCTCAAGA 60.021 45.833 6.77 0.00 40.33 3.02
618 619 4.221703 TCCTTAGAAGCACTTCCTCAAGAG 59.778 45.833 6.77 0.00 40.33 2.85
619 620 4.020662 CCTTAGAAGCACTTCCTCAAGAGT 60.021 45.833 6.77 0.00 40.33 3.24
620 621 3.676291 AGAAGCACTTCCTCAAGAGTC 57.324 47.619 6.77 0.00 40.33 3.36
621 622 2.301583 AGAAGCACTTCCTCAAGAGTCC 59.698 50.000 6.77 0.00 40.33 3.85
622 623 2.022718 AGCACTTCCTCAAGAGTCCT 57.977 50.000 0.00 0.00 33.34 3.85
623 624 2.334023 AGCACTTCCTCAAGAGTCCTT 58.666 47.619 0.00 0.00 33.34 3.36
624 625 2.708325 AGCACTTCCTCAAGAGTCCTTT 59.292 45.455 0.00 0.00 33.34 3.11
625 626 3.137360 AGCACTTCCTCAAGAGTCCTTTT 59.863 43.478 0.00 0.00 33.34 2.27
626 627 4.348168 AGCACTTCCTCAAGAGTCCTTTTA 59.652 41.667 0.00 0.00 33.34 1.52
627 628 5.063880 GCACTTCCTCAAGAGTCCTTTTAA 58.936 41.667 0.00 0.00 33.34 1.52
628 629 5.531287 GCACTTCCTCAAGAGTCCTTTTAAA 59.469 40.000 0.00 0.00 33.34 1.52
629 630 6.039382 GCACTTCCTCAAGAGTCCTTTTAAAA 59.961 38.462 0.00 0.00 33.34 1.52
630 631 7.416326 GCACTTCCTCAAGAGTCCTTTTAAAAA 60.416 37.037 1.66 0.00 33.34 1.94
631 632 8.131731 CACTTCCTCAAGAGTCCTTTTAAAAAG 58.868 37.037 1.66 0.00 33.34 2.27
632 633 7.834681 ACTTCCTCAAGAGTCCTTTTAAAAAGT 59.165 33.333 1.66 0.00 33.34 2.66
633 634 7.803279 TCCTCAAGAGTCCTTTTAAAAAGTC 57.197 36.000 1.66 1.20 0.00 3.01
634 635 6.771267 TCCTCAAGAGTCCTTTTAAAAAGTCC 59.229 38.462 1.66 0.00 0.00 3.85
635 636 6.773200 CCTCAAGAGTCCTTTTAAAAAGTCCT 59.227 38.462 1.66 0.00 0.00 3.85
636 637 7.937394 CCTCAAGAGTCCTTTTAAAAAGTCCTA 59.063 37.037 1.66 0.00 0.00 2.94
637 638 9.338622 CTCAAGAGTCCTTTTAAAAAGTCCTAA 57.661 33.333 1.66 0.00 0.00 2.69
638 639 9.689501 TCAAGAGTCCTTTTAAAAAGTCCTAAA 57.310 29.630 1.66 0.00 0.00 1.85
639 640 9.952188 CAAGAGTCCTTTTAAAAAGTCCTAAAG 57.048 33.333 1.66 0.00 0.00 1.85
640 641 9.916360 AAGAGTCCTTTTAAAAAGTCCTAAAGA 57.084 29.630 1.66 0.00 0.00 2.52
641 642 9.339850 AGAGTCCTTTTAAAAAGTCCTAAAGAC 57.660 33.333 1.66 0.00 46.71 3.01
657 658 9.022884 GTCCTAAAGACTAGAAAAAGTCCTAGA 57.977 37.037 0.00 0.00 45.86 2.43
658 659 9.597681 TCCTAAAGACTAGAAAAAGTCCTAGAA 57.402 33.333 0.00 0.00 45.86 2.10
669 670 8.881262 AGAAAAAGTCCTAGAATTAGAGAACCA 58.119 33.333 0.00 0.00 0.00 3.67
670 671 9.503399 GAAAAAGTCCTAGAATTAGAGAACCAA 57.497 33.333 0.00 0.00 0.00 3.67
671 672 9.862149 AAAAAGTCCTAGAATTAGAGAACCAAA 57.138 29.630 0.00 0.00 0.00 3.28
672 673 8.850007 AAAGTCCTAGAATTAGAGAACCAAAC 57.150 34.615 0.00 0.00 0.00 2.93
673 674 7.554959 AGTCCTAGAATTAGAGAACCAAACA 57.445 36.000 0.00 0.00 0.00 2.83
674 675 7.387643 AGTCCTAGAATTAGAGAACCAAACAC 58.612 38.462 0.00 0.00 0.00 3.32
675 676 6.594547 GTCCTAGAATTAGAGAACCAAACACC 59.405 42.308 0.00 0.00 0.00 4.16
676 677 6.271391 TCCTAGAATTAGAGAACCAAACACCA 59.729 38.462 0.00 0.00 0.00 4.17
677 678 6.371825 CCTAGAATTAGAGAACCAAACACCAC 59.628 42.308 0.00 0.00 0.00 4.16
744 746 4.133013 TCCCGCTAGTTAATTTGGTCTC 57.867 45.455 0.00 0.00 0.00 3.36
799 817 6.861572 CACTACAAATTCTTCTACGTCAGTGA 59.138 38.462 0.00 0.00 32.28 3.41
813 831 3.378427 CGTCAGTGAGGTGACAGATATGA 59.622 47.826 4.63 0.00 46.19 2.15
814 832 4.677584 GTCAGTGAGGTGACAGATATGAC 58.322 47.826 0.00 0.00 45.34 3.06
833 851 4.067896 TGACTCTTTTTCTTAGCCAGCAG 58.932 43.478 0.00 0.00 0.00 4.24
834 874 4.202357 TGACTCTTTTTCTTAGCCAGCAGA 60.202 41.667 0.00 0.00 0.00 4.26
843 883 5.991328 TCTTAGCCAGCAGAAAAATATCG 57.009 39.130 0.00 0.00 0.00 2.92
1017 1583 0.323302 TAATGGCGGTCAAGCTCACA 59.677 50.000 0.00 0.00 37.29 3.58
1074 1640 2.364448 GGCTCCCTCCTCGTCCTT 60.364 66.667 0.00 0.00 0.00 3.36
1423 2023 0.459237 CATCTTCTTCCTCAGCGCGT 60.459 55.000 8.43 0.00 0.00 6.01
1607 2240 2.257541 TAGCCCCCTGGAAGCTAGCT 62.258 60.000 12.68 12.68 38.06 3.32
1608 2241 1.766461 GCCCCCTGGAAGCTAGCTA 60.766 63.158 19.70 0.77 0.00 3.32
1609 2242 1.763546 GCCCCCTGGAAGCTAGCTAG 61.764 65.000 19.70 16.84 0.00 3.42
1639 2272 8.253810 AGATATTTTTGCTTAGCCTTTTCTTCC 58.746 33.333 0.29 0.00 0.00 3.46
1640 2273 4.600692 TTTTGCTTAGCCTTTTCTTCCC 57.399 40.909 0.29 0.00 0.00 3.97
1654 2300 7.426410 CCTTTTCTTCCCTCTTAGTTTTTGTC 58.574 38.462 0.00 0.00 0.00 3.18
1783 2433 9.069078 CAAAATTGACATAATCTGTGCTGTTAG 57.931 33.333 0.00 0.00 38.54 2.34
1786 2436 9.448438 AATTGACATAATCTGTGCTGTTAGTAA 57.552 29.630 0.00 0.00 38.54 2.24
1845 2496 3.418684 TGTGAGGGGCTAGTTTTCTTC 57.581 47.619 0.00 0.00 0.00 2.87
1895 2580 5.662657 AGCACCCCATAGATATTTTTGCTTT 59.337 36.000 0.00 0.00 34.15 3.51
1898 2583 5.424895 ACCCCATAGATATTTTTGCTTTGCA 59.575 36.000 0.00 0.00 36.47 4.08
2246 2939 1.069022 CACTCCAGTTGCAACCATTCG 60.069 52.381 25.62 12.93 0.00 3.34
2534 3229 6.925165 CAGTCTTGCACCAAAAGTATTGAATT 59.075 34.615 0.00 0.00 0.00 2.17
2538 3233 8.149647 TCTTGCACCAAAAGTATTGAATTGAAT 58.850 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.062206 GAAGCTGCGAGCATCAAGC 59.938 57.895 10.16 0.00 45.56 4.01
2 3 1.080435 TCGAAGCTGCGAGCATCAAG 61.080 55.000 14.32 0.00 45.56 3.02
3 4 0.460811 ATCGAAGCTGCGAGCATCAA 60.461 50.000 23.53 0.00 45.56 2.57
4 5 1.142531 ATCGAAGCTGCGAGCATCA 59.857 52.632 23.53 0.00 45.56 3.07
5 6 0.873312 TCATCGAAGCTGCGAGCATC 60.873 55.000 23.53 0.00 45.56 3.91
6 7 0.875040 CTCATCGAAGCTGCGAGCAT 60.875 55.000 23.53 2.33 45.56 3.79
7 8 1.517913 CTCATCGAAGCTGCGAGCA 60.518 57.895 23.53 10.22 45.56 4.26
8 9 2.869256 GCTCATCGAAGCTGCGAGC 61.869 63.158 23.53 16.71 44.26 5.03
9 10 3.307646 GCTCATCGAAGCTGCGAG 58.692 61.111 23.53 14.32 44.26 5.03
15 16 0.176680 TGGGAGAAGCTCATCGAAGC 59.823 55.000 0.62 0.62 42.82 3.86
16 17 1.480137 ACTGGGAGAAGCTCATCGAAG 59.520 52.381 0.00 0.00 31.08 3.79
17 18 1.561643 ACTGGGAGAAGCTCATCGAA 58.438 50.000 0.00 0.00 31.08 3.71
18 19 2.302260 CTACTGGGAGAAGCTCATCGA 58.698 52.381 0.00 0.00 31.08 3.59
19 20 1.269517 GCTACTGGGAGAAGCTCATCG 60.270 57.143 0.00 0.00 33.40 3.84
20 21 1.759445 TGCTACTGGGAGAAGCTCATC 59.241 52.381 0.00 0.00 37.16 2.92
21 22 1.871418 TGCTACTGGGAGAAGCTCAT 58.129 50.000 0.00 0.00 37.16 2.90
22 23 1.644509 TTGCTACTGGGAGAAGCTCA 58.355 50.000 0.00 0.00 37.16 4.26
23 24 2.770164 TTTGCTACTGGGAGAAGCTC 57.230 50.000 0.00 0.00 37.16 4.09
24 25 2.943199 GCATTTGCTACTGGGAGAAGCT 60.943 50.000 0.00 0.00 37.16 3.74
25 26 1.403323 GCATTTGCTACTGGGAGAAGC 59.597 52.381 0.00 0.00 38.21 3.86
52 53 2.281345 AGCTGCTATGGGCGATGC 60.281 61.111 0.00 0.00 45.43 3.91
53 54 2.025969 CGAGCTGCTATGGGCGATG 61.026 63.158 0.15 0.00 45.43 3.84
54 55 2.341543 CGAGCTGCTATGGGCGAT 59.658 61.111 0.15 0.00 45.43 4.58
55 56 4.592192 GCGAGCTGCTATGGGCGA 62.592 66.667 0.15 0.00 45.43 5.54
56 57 4.897357 TGCGAGCTGCTATGGGCG 62.897 66.667 0.15 2.29 46.63 6.13
57 58 2.971413 CTGCGAGCTGCTATGGGC 60.971 66.667 0.15 4.82 46.63 5.36
58 59 1.593750 GACTGCGAGCTGCTATGGG 60.594 63.158 0.15 0.00 46.63 4.00
59 60 0.597118 GAGACTGCGAGCTGCTATGG 60.597 60.000 0.15 0.00 46.63 2.74
60 61 0.597118 GGAGACTGCGAGCTGCTATG 60.597 60.000 0.15 0.00 46.63 2.23
61 62 1.739049 GGAGACTGCGAGCTGCTAT 59.261 57.895 0.15 0.00 46.63 2.97
62 63 2.418910 GGGAGACTGCGAGCTGCTA 61.419 63.158 0.15 0.00 46.63 3.49
63 64 3.768922 GGGAGACTGCGAGCTGCT 61.769 66.667 0.00 0.00 46.63 4.24
64 65 4.828925 GGGGAGACTGCGAGCTGC 62.829 72.222 0.00 0.00 46.70 5.25
65 66 4.154347 GGGGGAGACTGCGAGCTG 62.154 72.222 0.00 0.37 0.00 4.24
68 69 3.827898 GACGGGGGAGACTGCGAG 61.828 72.222 0.00 0.00 0.00 5.03
71 72 3.462678 GAGGACGGGGGAGACTGC 61.463 72.222 0.00 0.00 0.00 4.40
72 73 3.141488 CGAGGACGGGGGAGACTG 61.141 72.222 0.00 0.00 35.72 3.51
73 74 3.641925 GACGAGGACGGGGGAGACT 62.642 68.421 0.00 0.00 44.46 3.24
74 75 3.139469 GACGAGGACGGGGGAGAC 61.139 72.222 0.00 0.00 44.46 3.36
75 76 3.336568 AGACGAGGACGGGGGAGA 61.337 66.667 0.00 0.00 44.46 3.71
76 77 3.141488 CAGACGAGGACGGGGGAG 61.141 72.222 0.00 0.00 44.46 4.30
87 88 3.820084 TATAAGCTCGGGGGCAGACGA 62.820 57.143 0.00 0.00 37.56 4.20
88 89 1.461091 TATAAGCTCGGGGGCAGACG 61.461 60.000 0.00 0.00 34.17 4.18
89 90 0.756903 TTATAAGCTCGGGGGCAGAC 59.243 55.000 0.00 0.00 34.17 3.51
90 91 1.048601 CTTATAAGCTCGGGGGCAGA 58.951 55.000 0.00 0.00 34.17 4.26
91 92 3.614399 CTTATAAGCTCGGGGGCAG 57.386 57.895 0.00 0.00 34.17 4.85
102 103 0.537143 TGGGCGCCATGGCTTATAAG 60.537 55.000 33.07 18.06 44.11 1.73
103 104 0.112218 ATGGGCGCCATGGCTTATAA 59.888 50.000 33.07 15.78 43.39 0.98
104 105 0.988063 TATGGGCGCCATGGCTTATA 59.012 50.000 33.07 21.05 44.84 0.98
105 106 0.112218 TTATGGGCGCCATGGCTTAT 59.888 50.000 33.07 21.98 44.84 1.73
106 107 0.821711 GTTATGGGCGCCATGGCTTA 60.822 55.000 33.07 17.01 44.84 3.09
107 108 2.127232 GTTATGGGCGCCATGGCTT 61.127 57.895 33.07 15.21 44.84 4.35
108 109 2.519302 GTTATGGGCGCCATGGCT 60.519 61.111 33.07 17.48 44.84 4.75
109 110 2.832661 TGTTATGGGCGCCATGGC 60.833 61.111 30.85 27.67 44.84 4.40
110 111 2.848858 GCTGTTATGGGCGCCATGG 61.849 63.158 30.85 7.63 44.84 3.66
111 112 1.789078 GAGCTGTTATGGGCGCCATG 61.789 60.000 30.85 10.24 44.84 3.66
112 113 1.526917 GAGCTGTTATGGGCGCCAT 60.527 57.895 30.85 21.27 46.99 4.40
113 114 2.124736 GAGCTGTTATGGGCGCCA 60.125 61.111 30.85 15.30 38.19 5.69
114 115 2.638330 TACGAGCTGTTATGGGCGCC 62.638 60.000 21.18 21.18 0.00 6.53
115 116 1.215655 CTACGAGCTGTTATGGGCGC 61.216 60.000 0.00 0.00 0.00 6.53
116 117 0.597637 CCTACGAGCTGTTATGGGCG 60.598 60.000 0.00 0.00 0.00 6.13
117 118 0.750850 TCCTACGAGCTGTTATGGGC 59.249 55.000 0.00 0.00 0.00 5.36
118 119 2.802787 CTCCTACGAGCTGTTATGGG 57.197 55.000 0.00 0.00 0.00 4.00
128 129 3.217743 GACGGGGGCTCCTACGAG 61.218 72.222 8.38 0.00 39.33 4.18
161 162 3.272334 GCGGCCATGGCTTACGAG 61.272 66.667 34.70 19.38 41.60 4.18
162 163 4.849310 GGCGGCCATGGCTTACGA 62.849 66.667 34.70 0.00 41.60 3.43
176 177 4.821589 GAGCTCAAGGTCCGGGCG 62.822 72.222 9.40 0.00 36.62 6.13
177 178 4.821589 CGAGCTCAAGGTCCGGGC 62.822 72.222 15.40 0.00 39.23 6.13
178 179 4.821589 GCGAGCTCAAGGTCCGGG 62.822 72.222 15.40 0.00 39.23 5.73
179 180 3.997064 CTGCGAGCTCAAGGTCCGG 62.997 68.421 15.40 0.00 39.23 5.14
180 181 2.507992 CTGCGAGCTCAAGGTCCG 60.508 66.667 15.40 0.00 39.23 4.79
181 182 2.125350 CCTGCGAGCTCAAGGTCC 60.125 66.667 19.90 0.66 39.23 4.46
182 183 2.817396 GCCTGCGAGCTCAAGGTC 60.817 66.667 25.73 17.39 39.04 3.85
183 184 4.400961 GGCCTGCGAGCTCAAGGT 62.401 66.667 25.73 0.00 0.00 3.50
184 185 3.694058 ATGGCCTGCGAGCTCAAGG 62.694 63.158 22.66 22.66 0.00 3.61
185 186 2.124819 ATGGCCTGCGAGCTCAAG 60.125 61.111 15.40 10.38 0.00 3.02
186 187 2.437180 CATGGCCTGCGAGCTCAA 60.437 61.111 15.40 0.00 0.00 3.02
187 188 4.478371 CCATGGCCTGCGAGCTCA 62.478 66.667 15.40 0.00 0.00 4.26
200 201 2.124193 TTGCTCCCATCCGCCATG 60.124 61.111 0.00 0.00 0.00 3.66
201 202 2.124151 GTTGCTCCCATCCGCCAT 60.124 61.111 0.00 0.00 0.00 4.40
202 203 3.645660 TGTTGCTCCCATCCGCCA 61.646 61.111 0.00 0.00 0.00 5.69
203 204 3.134127 GTGTTGCTCCCATCCGCC 61.134 66.667 0.00 0.00 0.00 6.13
204 205 3.134127 GGTGTTGCTCCCATCCGC 61.134 66.667 0.00 0.00 0.00 5.54
205 206 2.438434 GGGTGTTGCTCCCATCCG 60.438 66.667 1.76 0.00 44.05 4.18
206 207 2.043953 GGGGTGTTGCTCCCATCC 60.044 66.667 8.31 1.41 46.26 3.51
211 212 2.362889 CCATGGGGGTGTTGCTCC 60.363 66.667 2.85 0.00 36.85 4.70
212 213 1.379044 CTCCATGGGGGTGTTGCTC 60.379 63.158 13.02 0.00 38.11 4.26
213 214 2.765969 CTCCATGGGGGTGTTGCT 59.234 61.111 13.02 0.00 38.11 3.91
214 215 2.362889 CCTCCATGGGGGTGTTGC 60.363 66.667 24.07 0.00 38.11 4.17
215 216 1.304282 CTCCTCCATGGGGGTGTTG 59.696 63.158 30.50 14.85 38.11 3.33
216 217 3.841078 CTCCTCCATGGGGGTGTT 58.159 61.111 30.50 0.00 38.11 3.32
221 222 3.016971 TGCACCTCCTCCATGGGG 61.017 66.667 13.02 8.75 36.20 4.96
222 223 2.593978 CTGCACCTCCTCCATGGG 59.406 66.667 13.02 2.26 36.20 4.00
223 224 2.124403 GCTGCACCTCCTCCATGG 60.124 66.667 4.97 4.97 37.10 3.66
224 225 1.101635 CATGCTGCACCTCCTCCATG 61.102 60.000 3.57 0.00 0.00 3.66
225 226 1.226542 CATGCTGCACCTCCTCCAT 59.773 57.895 3.57 0.00 0.00 3.41
226 227 1.907222 CTCATGCTGCACCTCCTCCA 61.907 60.000 3.57 0.00 0.00 3.86
227 228 1.153208 CTCATGCTGCACCTCCTCC 60.153 63.158 3.57 0.00 0.00 4.30
228 229 1.153208 CCTCATGCTGCACCTCCTC 60.153 63.158 3.57 0.00 0.00 3.71
229 230 1.922369 ACCTCATGCTGCACCTCCT 60.922 57.895 3.57 0.00 0.00 3.69
230 231 1.748122 CACCTCATGCTGCACCTCC 60.748 63.158 3.57 0.00 0.00 4.30
231 232 3.900855 CACCTCATGCTGCACCTC 58.099 61.111 3.57 0.00 0.00 3.85
240 241 2.124570 CCCCCTTCGCACCTCATG 60.125 66.667 0.00 0.00 0.00 3.07
272 273 1.699634 TCCTCCAATATAGCACCAGGC 59.300 52.381 0.00 0.00 45.30 4.85
273 274 2.304180 CCTCCTCCAATATAGCACCAGG 59.696 54.545 0.00 0.00 0.00 4.45
274 275 2.289945 GCCTCCTCCAATATAGCACCAG 60.290 54.545 0.00 0.00 0.00 4.00
275 276 1.699634 GCCTCCTCCAATATAGCACCA 59.300 52.381 0.00 0.00 0.00 4.17
276 277 1.338200 CGCCTCCTCCAATATAGCACC 60.338 57.143 0.00 0.00 0.00 5.01
277 278 1.618837 TCGCCTCCTCCAATATAGCAC 59.381 52.381 0.00 0.00 0.00 4.40
278 279 1.895798 CTCGCCTCCTCCAATATAGCA 59.104 52.381 0.00 0.00 0.00 3.49
279 280 1.205893 CCTCGCCTCCTCCAATATAGC 59.794 57.143 0.00 0.00 0.00 2.97
280 281 1.205893 GCCTCGCCTCCTCCAATATAG 59.794 57.143 0.00 0.00 0.00 1.31
281 282 1.267121 GCCTCGCCTCCTCCAATATA 58.733 55.000 0.00 0.00 0.00 0.86
282 283 1.821061 CGCCTCGCCTCCTCCAATAT 61.821 60.000 0.00 0.00 0.00 1.28
283 284 2.498941 CGCCTCGCCTCCTCCAATA 61.499 63.158 0.00 0.00 0.00 1.90
284 285 3.854669 CGCCTCGCCTCCTCCAAT 61.855 66.667 0.00 0.00 0.00 3.16
288 289 3.771160 TTTCCGCCTCGCCTCCTC 61.771 66.667 0.00 0.00 0.00 3.71
289 290 4.083862 GTTTCCGCCTCGCCTCCT 62.084 66.667 0.00 0.00 0.00 3.69
290 291 4.388499 TGTTTCCGCCTCGCCTCC 62.388 66.667 0.00 0.00 0.00 4.30
291 292 2.579684 ATCTGTTTCCGCCTCGCCTC 62.580 60.000 0.00 0.00 0.00 4.70
292 293 1.327690 TATCTGTTTCCGCCTCGCCT 61.328 55.000 0.00 0.00 0.00 5.52
293 294 0.249911 ATATCTGTTTCCGCCTCGCC 60.250 55.000 0.00 0.00 0.00 5.54
294 295 0.861837 CATATCTGTTTCCGCCTCGC 59.138 55.000 0.00 0.00 0.00 5.03
295 296 1.068588 TCCATATCTGTTTCCGCCTCG 59.931 52.381 0.00 0.00 0.00 4.63
296 297 2.910688 TCCATATCTGTTTCCGCCTC 57.089 50.000 0.00 0.00 0.00 4.70
297 298 3.545703 CTTTCCATATCTGTTTCCGCCT 58.454 45.455 0.00 0.00 0.00 5.52
298 299 2.033424 GCTTTCCATATCTGTTTCCGCC 59.967 50.000 0.00 0.00 0.00 6.13
299 300 2.286418 CGCTTTCCATATCTGTTTCCGC 60.286 50.000 0.00 0.00 0.00 5.54
300 301 3.194861 TCGCTTTCCATATCTGTTTCCG 58.805 45.455 0.00 0.00 0.00 4.30
301 302 3.561725 CCTCGCTTTCCATATCTGTTTCC 59.438 47.826 0.00 0.00 0.00 3.13
302 303 4.192317 ACCTCGCTTTCCATATCTGTTTC 58.808 43.478 0.00 0.00 0.00 2.78
303 304 4.192317 GACCTCGCTTTCCATATCTGTTT 58.808 43.478 0.00 0.00 0.00 2.83
304 305 3.197766 TGACCTCGCTTTCCATATCTGTT 59.802 43.478 0.00 0.00 0.00 3.16
305 306 2.766263 TGACCTCGCTTTCCATATCTGT 59.234 45.455 0.00 0.00 0.00 3.41
306 307 3.126831 GTGACCTCGCTTTCCATATCTG 58.873 50.000 0.00 0.00 0.00 2.90
307 308 2.223829 CGTGACCTCGCTTTCCATATCT 60.224 50.000 0.00 0.00 0.00 1.98
308 309 2.128035 CGTGACCTCGCTTTCCATATC 58.872 52.381 0.00 0.00 0.00 1.63
309 310 1.202533 CCGTGACCTCGCTTTCCATAT 60.203 52.381 0.00 0.00 0.00 1.78
310 311 0.174845 CCGTGACCTCGCTTTCCATA 59.825 55.000 0.00 0.00 0.00 2.74
311 312 1.079127 CCGTGACCTCGCTTTCCAT 60.079 57.895 0.00 0.00 0.00 3.41
312 313 2.342279 CCGTGACCTCGCTTTCCA 59.658 61.111 0.00 0.00 0.00 3.53
313 314 3.119096 GCCGTGACCTCGCTTTCC 61.119 66.667 0.00 0.00 0.00 3.13
314 315 3.119096 GGCCGTGACCTCGCTTTC 61.119 66.667 0.00 0.00 0.00 2.62
325 326 4.735132 TTCTTCCTCGCGGCCGTG 62.735 66.667 32.48 32.48 35.54 4.94
326 327 4.436998 CTTCTTCCTCGCGGCCGT 62.437 66.667 28.70 0.00 35.54 5.68
327 328 3.642778 TTCTTCTTCCTCGCGGCCG 62.643 63.158 24.05 24.05 0.00 6.13
328 329 1.811679 CTTCTTCTTCCTCGCGGCC 60.812 63.158 6.13 0.00 0.00 6.13
329 330 1.079750 ACTTCTTCTTCCTCGCGGC 60.080 57.895 6.13 0.00 0.00 6.53
330 331 0.737715 CCACTTCTTCTTCCTCGCGG 60.738 60.000 6.13 0.00 0.00 6.46
331 332 0.243907 TCCACTTCTTCTTCCTCGCG 59.756 55.000 0.00 0.00 0.00 5.87
332 333 2.275318 CATCCACTTCTTCTTCCTCGC 58.725 52.381 0.00 0.00 0.00 5.03
333 334 2.275318 GCATCCACTTCTTCTTCCTCG 58.725 52.381 0.00 0.00 0.00 4.63
334 335 2.275318 CGCATCCACTTCTTCTTCCTC 58.725 52.381 0.00 0.00 0.00 3.71
335 336 1.065854 CCGCATCCACTTCTTCTTCCT 60.066 52.381 0.00 0.00 0.00 3.36
336 337 1.373570 CCGCATCCACTTCTTCTTCC 58.626 55.000 0.00 0.00 0.00 3.46
337 338 1.373570 CCCGCATCCACTTCTTCTTC 58.626 55.000 0.00 0.00 0.00 2.87
338 339 0.678048 GCCCGCATCCACTTCTTCTT 60.678 55.000 0.00 0.00 0.00 2.52
339 340 1.078143 GCCCGCATCCACTTCTTCT 60.078 57.895 0.00 0.00 0.00 2.85
340 341 2.464459 CGCCCGCATCCACTTCTTC 61.464 63.158 0.00 0.00 0.00 2.87
341 342 2.436646 CGCCCGCATCCACTTCTT 60.437 61.111 0.00 0.00 0.00 2.52
342 343 3.254024 AACGCCCGCATCCACTTCT 62.254 57.895 0.00 0.00 0.00 2.85
343 344 2.746277 AACGCCCGCATCCACTTC 60.746 61.111 0.00 0.00 0.00 3.01
344 345 3.055719 CAACGCCCGCATCCACTT 61.056 61.111 0.00 0.00 0.00 3.16
353 354 1.682451 TATCTTCTCCCCAACGCCCG 61.682 60.000 0.00 0.00 0.00 6.13
354 355 0.544697 TTATCTTCTCCCCAACGCCC 59.455 55.000 0.00 0.00 0.00 6.13
355 356 1.475213 CCTTATCTTCTCCCCAACGCC 60.475 57.143 0.00 0.00 0.00 5.68
356 357 1.209747 ACCTTATCTTCTCCCCAACGC 59.790 52.381 0.00 0.00 0.00 4.84
357 358 3.449737 TGTACCTTATCTTCTCCCCAACG 59.550 47.826 0.00 0.00 0.00 4.10
358 359 4.679905 CGTGTACCTTATCTTCTCCCCAAC 60.680 50.000 0.00 0.00 0.00 3.77
359 360 3.449737 CGTGTACCTTATCTTCTCCCCAA 59.550 47.826 0.00 0.00 0.00 4.12
360 361 3.028850 CGTGTACCTTATCTTCTCCCCA 58.971 50.000 0.00 0.00 0.00 4.96
361 362 3.029570 ACGTGTACCTTATCTTCTCCCC 58.970 50.000 0.00 0.00 0.00 4.81
362 363 3.181478 CCACGTGTACCTTATCTTCTCCC 60.181 52.174 15.65 0.00 0.00 4.30
363 364 3.446516 ACCACGTGTACCTTATCTTCTCC 59.553 47.826 15.65 0.00 0.00 3.71
364 365 4.439837 GGACCACGTGTACCTTATCTTCTC 60.440 50.000 15.65 0.00 0.00 2.87
365 366 3.446516 GGACCACGTGTACCTTATCTTCT 59.553 47.826 15.65 0.00 0.00 2.85
366 367 3.429960 GGGACCACGTGTACCTTATCTTC 60.430 52.174 21.58 5.77 45.61 2.87
367 368 2.498885 GGGACCACGTGTACCTTATCTT 59.501 50.000 21.58 0.00 45.61 2.40
368 369 2.105766 GGGACCACGTGTACCTTATCT 58.894 52.381 21.58 0.00 45.61 1.98
369 370 2.591571 GGGACCACGTGTACCTTATC 57.408 55.000 21.58 7.14 45.61 1.75
375 376 1.475682 CTAGGAAGGGACCACGTGTAC 59.524 57.143 15.65 7.71 0.00 2.90
376 377 1.076024 ACTAGGAAGGGACCACGTGTA 59.924 52.381 15.65 0.00 0.00 2.90
377 378 0.178941 ACTAGGAAGGGACCACGTGT 60.179 55.000 15.65 2.26 0.00 4.49
378 379 0.246635 CACTAGGAAGGGACCACGTG 59.753 60.000 9.08 9.08 0.00 4.49
379 380 0.903454 CCACTAGGAAGGGACCACGT 60.903 60.000 0.00 0.00 36.89 4.49
380 381 1.898154 CCACTAGGAAGGGACCACG 59.102 63.158 0.00 0.00 36.89 4.94
381 382 0.910088 AGCCACTAGGAAGGGACCAC 60.910 60.000 0.00 0.00 36.89 4.16
382 383 0.714180 TAGCCACTAGGAAGGGACCA 59.286 55.000 0.00 0.00 36.89 4.02
383 384 1.415200 CTAGCCACTAGGAAGGGACC 58.585 60.000 0.00 0.00 36.89 4.46
384 385 0.753867 GCTAGCCACTAGGAAGGGAC 59.246 60.000 2.29 0.00 34.88 4.46
385 386 0.755698 CGCTAGCCACTAGGAAGGGA 60.756 60.000 9.66 0.00 35.63 4.20
386 387 1.742768 CGCTAGCCACTAGGAAGGG 59.257 63.158 9.66 0.00 34.88 3.95
387 388 1.068250 GCGCTAGCCACTAGGAAGG 59.932 63.158 9.66 0.00 34.88 3.46
388 389 4.740235 GCGCTAGCCACTAGGAAG 57.260 61.111 9.66 0.00 34.88 3.46
405 406 3.414700 GTCACTTCGCCACGCTGG 61.415 66.667 0.25 0.25 41.55 4.85
406 407 3.414700 GGTCACTTCGCCACGCTG 61.415 66.667 0.00 0.00 0.00 5.18
414 415 4.796231 CTCGGGCCGGTCACTTCG 62.796 72.222 27.98 1.27 0.00 3.79
444 445 3.843300 AAACGTTTACGCGCGGTGC 62.843 57.895 35.22 19.05 44.43 5.01
445 446 1.785533 GAAACGTTTACGCGCGGTG 60.786 57.895 35.22 19.78 44.43 4.94
446 447 2.545829 GAAACGTTTACGCGCGGT 59.454 55.556 35.22 19.03 44.43 5.68
447 448 2.202083 GGAAACGTTTACGCGCGG 60.202 61.111 35.22 18.29 44.43 6.46
448 449 2.202083 GGGAAACGTTTACGCGCG 60.202 61.111 30.96 30.96 44.43 6.86
449 450 0.316854 TTTGGGAAACGTTTACGCGC 60.317 50.000 16.84 11.88 44.43 6.86
450 451 2.038367 CTTTTGGGAAACGTTTACGCG 58.962 47.619 16.84 3.53 44.43 6.01
451 452 2.387185 CCTTTTGGGAAACGTTTACGC 58.613 47.619 16.84 16.05 39.30 4.42
464 465 1.873270 GCGTGCCCTTACCCTTTTGG 61.873 60.000 0.00 0.00 41.37 3.28
465 466 1.175983 TGCGTGCCCTTACCCTTTTG 61.176 55.000 0.00 0.00 0.00 2.44
466 467 0.893727 CTGCGTGCCCTTACCCTTTT 60.894 55.000 0.00 0.00 0.00 2.27
467 468 1.303317 CTGCGTGCCCTTACCCTTT 60.303 57.895 0.00 0.00 0.00 3.11
468 469 2.351276 CTGCGTGCCCTTACCCTT 59.649 61.111 0.00 0.00 0.00 3.95
469 470 2.928396 ACTGCGTGCCCTTACCCT 60.928 61.111 0.00 0.00 0.00 4.34
470 471 2.536997 ATCACTGCGTGCCCTTACCC 62.537 60.000 4.15 0.00 32.98 3.69
471 472 1.078426 ATCACTGCGTGCCCTTACC 60.078 57.895 4.15 0.00 32.98 2.85
472 473 0.108138 AGATCACTGCGTGCCCTTAC 60.108 55.000 0.00 0.00 32.98 2.34
473 474 0.108186 CAGATCACTGCGTGCCCTTA 60.108 55.000 0.00 0.00 37.33 2.69
474 475 1.376424 CAGATCACTGCGTGCCCTT 60.376 57.895 0.00 0.00 37.33 3.95
475 476 2.267006 CAGATCACTGCGTGCCCT 59.733 61.111 0.00 1.81 37.33 5.19
483 484 3.679389 ACACCCTTTAAGCAGATCACTG 58.321 45.455 0.00 0.00 45.91 3.66
484 485 4.373156 AACACCCTTTAAGCAGATCACT 57.627 40.909 0.00 0.00 0.00 3.41
485 486 4.321230 CCAAACACCCTTTAAGCAGATCAC 60.321 45.833 0.00 0.00 0.00 3.06
486 487 3.826157 CCAAACACCCTTTAAGCAGATCA 59.174 43.478 0.00 0.00 0.00 2.92
487 488 3.826729 ACCAAACACCCTTTAAGCAGATC 59.173 43.478 0.00 0.00 0.00 2.75
488 489 3.844640 ACCAAACACCCTTTAAGCAGAT 58.155 40.909 0.00 0.00 0.00 2.90
489 490 3.306472 ACCAAACACCCTTTAAGCAGA 57.694 42.857 0.00 0.00 0.00 4.26
490 491 4.142049 TGAAACCAAACACCCTTTAAGCAG 60.142 41.667 0.00 0.00 0.00 4.24
491 492 3.769844 TGAAACCAAACACCCTTTAAGCA 59.230 39.130 0.00 0.00 0.00 3.91
492 493 4.368315 CTGAAACCAAACACCCTTTAAGC 58.632 43.478 0.00 0.00 0.00 3.09
493 494 4.202212 CCCTGAAACCAAACACCCTTTAAG 60.202 45.833 0.00 0.00 0.00 1.85
494 495 3.707102 CCCTGAAACCAAACACCCTTTAA 59.293 43.478 0.00 0.00 0.00 1.52
495 496 3.052793 TCCCTGAAACCAAACACCCTTTA 60.053 43.478 0.00 0.00 0.00 1.85
496 497 2.115427 CCCTGAAACCAAACACCCTTT 58.885 47.619 0.00 0.00 0.00 3.11
497 498 1.289530 TCCCTGAAACCAAACACCCTT 59.710 47.619 0.00 0.00 0.00 3.95
498 499 0.930726 TCCCTGAAACCAAACACCCT 59.069 50.000 0.00 0.00 0.00 4.34
499 500 1.037493 GTCCCTGAAACCAAACACCC 58.963 55.000 0.00 0.00 0.00 4.61
500 501 2.067365 AGTCCCTGAAACCAAACACC 57.933 50.000 0.00 0.00 0.00 4.16
501 502 4.465632 AAAAGTCCCTGAAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
525 526 9.384764 GCTATGAACTTTTTCTAGTCCTAACAT 57.615 33.333 0.00 0.00 32.36 2.71
526 527 8.372459 TGCTATGAACTTTTTCTAGTCCTAACA 58.628 33.333 0.00 0.00 32.36 2.41
527 528 8.773404 TGCTATGAACTTTTTCTAGTCCTAAC 57.227 34.615 0.00 0.00 32.36 2.34
528 529 9.787435 TTTGCTATGAACTTTTTCTAGTCCTAA 57.213 29.630 0.00 0.00 32.36 2.69
529 530 9.959721 ATTTGCTATGAACTTTTTCTAGTCCTA 57.040 29.630 0.00 0.00 32.36 2.94
530 531 8.870075 ATTTGCTATGAACTTTTTCTAGTCCT 57.130 30.769 0.00 0.00 32.36 3.85
531 532 8.730680 TGATTTGCTATGAACTTTTTCTAGTCC 58.269 33.333 0.00 0.00 32.36 3.85
536 537 9.598517 TTGTTTGATTTGCTATGAACTTTTTCT 57.401 25.926 0.00 0.00 32.36 2.52
537 538 9.853921 CTTGTTTGATTTGCTATGAACTTTTTC 57.146 29.630 0.00 0.00 0.00 2.29
538 539 8.829612 CCTTGTTTGATTTGCTATGAACTTTTT 58.170 29.630 0.00 0.00 0.00 1.94
539 540 7.986889 ACCTTGTTTGATTTGCTATGAACTTTT 59.013 29.630 0.00 0.00 0.00 2.27
540 541 7.439056 CACCTTGTTTGATTTGCTATGAACTTT 59.561 33.333 0.00 0.00 0.00 2.66
541 542 6.925165 CACCTTGTTTGATTTGCTATGAACTT 59.075 34.615 0.00 0.00 0.00 2.66
542 543 6.449698 CACCTTGTTTGATTTGCTATGAACT 58.550 36.000 0.00 0.00 0.00 3.01
543 544 5.634859 CCACCTTGTTTGATTTGCTATGAAC 59.365 40.000 0.00 0.00 0.00 3.18
544 545 5.279406 CCCACCTTGTTTGATTTGCTATGAA 60.279 40.000 0.00 0.00 0.00 2.57
545 546 4.220382 CCCACCTTGTTTGATTTGCTATGA 59.780 41.667 0.00 0.00 0.00 2.15
546 547 4.220382 TCCCACCTTGTTTGATTTGCTATG 59.780 41.667 0.00 0.00 0.00 2.23
547 548 4.415596 TCCCACCTTGTTTGATTTGCTAT 58.584 39.130 0.00 0.00 0.00 2.97
548 549 3.838565 TCCCACCTTGTTTGATTTGCTA 58.161 40.909 0.00 0.00 0.00 3.49
549 550 2.676748 TCCCACCTTGTTTGATTTGCT 58.323 42.857 0.00 0.00 0.00 3.91
550 551 3.683365 ATCCCACCTTGTTTGATTTGC 57.317 42.857 0.00 0.00 0.00 3.68
551 552 6.767423 AGAAAAATCCCACCTTGTTTGATTTG 59.233 34.615 0.00 0.00 36.19 2.32
552 553 6.767423 CAGAAAAATCCCACCTTGTTTGATTT 59.233 34.615 0.00 0.00 37.27 2.17
553 554 6.099557 TCAGAAAAATCCCACCTTGTTTGATT 59.900 34.615 0.00 0.00 0.00 2.57
554 555 5.602145 TCAGAAAAATCCCACCTTGTTTGAT 59.398 36.000 0.00 0.00 0.00 2.57
555 556 4.959210 TCAGAAAAATCCCACCTTGTTTGA 59.041 37.500 0.00 0.00 0.00 2.69
556 557 5.068987 TCTCAGAAAAATCCCACCTTGTTTG 59.931 40.000 0.00 0.00 0.00 2.93
557 558 5.069119 GTCTCAGAAAAATCCCACCTTGTTT 59.931 40.000 0.00 0.00 0.00 2.83
558 559 4.584743 GTCTCAGAAAAATCCCACCTTGTT 59.415 41.667 0.00 0.00 0.00 2.83
559 560 4.141158 AGTCTCAGAAAAATCCCACCTTGT 60.141 41.667 0.00 0.00 0.00 3.16
560 561 4.401925 AGTCTCAGAAAAATCCCACCTTG 58.598 43.478 0.00 0.00 0.00 3.61
561 562 4.731313 AGTCTCAGAAAAATCCCACCTT 57.269 40.909 0.00 0.00 0.00 3.50
562 563 4.731313 AAGTCTCAGAAAAATCCCACCT 57.269 40.909 0.00 0.00 0.00 4.00
563 564 5.791336 AAAAGTCTCAGAAAAATCCCACC 57.209 39.130 0.00 0.00 0.00 4.61
564 565 5.463392 GCAAAAAGTCTCAGAAAAATCCCAC 59.537 40.000 0.00 0.00 0.00 4.61
565 566 5.363580 AGCAAAAAGTCTCAGAAAAATCCCA 59.636 36.000 0.00 0.00 0.00 4.37
566 567 5.847304 AGCAAAAAGTCTCAGAAAAATCCC 58.153 37.500 0.00 0.00 0.00 3.85
567 568 8.871686 TTTAGCAAAAAGTCTCAGAAAAATCC 57.128 30.769 0.00 0.00 0.00 3.01
582 583 7.200455 GTGCTTCTAAGGACTTTTAGCAAAAA 58.800 34.615 7.07 0.00 43.15 1.94
583 584 6.735130 GTGCTTCTAAGGACTTTTAGCAAAA 58.265 36.000 7.07 0.00 43.15 2.44
584 585 6.313744 GTGCTTCTAAGGACTTTTAGCAAA 57.686 37.500 7.07 0.00 43.15 3.68
585 586 5.941948 GTGCTTCTAAGGACTTTTAGCAA 57.058 39.130 7.07 1.75 43.15 3.91
594 595 3.963428 TGAGGAAGTGCTTCTAAGGAC 57.037 47.619 11.18 6.27 46.33 3.85
595 596 4.160329 TCTTGAGGAAGTGCTTCTAAGGA 58.840 43.478 11.18 2.21 39.45 3.36
596 597 4.020662 ACTCTTGAGGAAGTGCTTCTAAGG 60.021 45.833 11.18 9.59 39.45 2.69
597 598 5.146010 ACTCTTGAGGAAGTGCTTCTAAG 57.854 43.478 11.18 12.23 39.45 2.18
598 599 4.021016 GGACTCTTGAGGAAGTGCTTCTAA 60.021 45.833 11.18 4.88 39.45 2.10
599 600 3.511934 GGACTCTTGAGGAAGTGCTTCTA 59.488 47.826 11.18 0.00 39.45 2.10
600 601 2.301583 GGACTCTTGAGGAAGTGCTTCT 59.698 50.000 11.18 0.00 39.45 2.85
601 602 2.301583 AGGACTCTTGAGGAAGTGCTTC 59.698 50.000 3.48 3.48 38.80 3.86
602 603 2.334023 AGGACTCTTGAGGAAGTGCTT 58.666 47.619 2.55 0.00 28.70 3.91
603 604 2.022718 AGGACTCTTGAGGAAGTGCT 57.977 50.000 2.55 0.00 0.00 4.40
604 605 2.849294 AAGGACTCTTGAGGAAGTGC 57.151 50.000 2.55 0.00 0.00 4.40
605 606 7.568199 TTTTAAAAGGACTCTTGAGGAAGTG 57.432 36.000 0.00 0.00 32.75 3.16
606 607 7.834681 ACTTTTTAAAAGGACTCTTGAGGAAGT 59.165 33.333 19.79 2.30 32.75 3.01
607 608 8.226819 ACTTTTTAAAAGGACTCTTGAGGAAG 57.773 34.615 19.79 1.72 32.75 3.46
608 609 7.284716 GGACTTTTTAAAAGGACTCTTGAGGAA 59.715 37.037 19.79 0.00 32.75 3.36
609 610 6.771267 GGACTTTTTAAAAGGACTCTTGAGGA 59.229 38.462 19.79 0.00 32.75 3.71
610 611 6.773200 AGGACTTTTTAAAAGGACTCTTGAGG 59.227 38.462 19.79 0.00 32.75 3.86
611 612 7.809546 AGGACTTTTTAAAAGGACTCTTGAG 57.190 36.000 19.79 3.44 32.75 3.02
612 613 9.689501 TTTAGGACTTTTTAAAAGGACTCTTGA 57.310 29.630 19.79 1.80 32.75 3.02
613 614 9.952188 CTTTAGGACTTTTTAAAAGGACTCTTG 57.048 33.333 19.79 8.12 32.75 3.02
614 615 9.916360 TCTTTAGGACTTTTTAAAAGGACTCTT 57.084 29.630 19.79 8.79 34.07 2.85
615 616 9.339850 GTCTTTAGGACTTTTTAAAAGGACTCT 57.660 33.333 19.79 13.17 41.46 3.24
631 632 9.022884 TCTAGGACTTTTTCTAGTCTTTAGGAC 57.977 37.037 0.00 0.00 43.26 3.85
632 633 9.597681 TTCTAGGACTTTTTCTAGTCTTTAGGA 57.402 33.333 0.00 0.00 43.26 2.94
643 644 8.881262 TGGTTCTCTAATTCTAGGACTTTTTCT 58.119 33.333 0.00 0.00 0.00 2.52
644 645 9.503399 TTGGTTCTCTAATTCTAGGACTTTTTC 57.497 33.333 0.00 0.00 0.00 2.29
645 646 9.862149 TTTGGTTCTCTAATTCTAGGACTTTTT 57.138 29.630 0.00 0.00 0.00 1.94
646 647 9.286170 GTTTGGTTCTCTAATTCTAGGACTTTT 57.714 33.333 0.00 0.00 0.00 2.27
647 648 8.437575 TGTTTGGTTCTCTAATTCTAGGACTTT 58.562 33.333 0.00 0.00 0.00 2.66
648 649 7.878644 GTGTTTGGTTCTCTAATTCTAGGACTT 59.121 37.037 0.00 0.00 0.00 3.01
649 650 7.387643 GTGTTTGGTTCTCTAATTCTAGGACT 58.612 38.462 0.00 0.00 0.00 3.85
650 651 6.594547 GGTGTTTGGTTCTCTAATTCTAGGAC 59.405 42.308 0.00 0.00 0.00 3.85
651 652 6.271391 TGGTGTTTGGTTCTCTAATTCTAGGA 59.729 38.462 0.00 0.00 0.00 2.94
652 653 6.371825 GTGGTGTTTGGTTCTCTAATTCTAGG 59.628 42.308 0.00 0.00 0.00 3.02
653 654 6.371825 GGTGGTGTTTGGTTCTCTAATTCTAG 59.628 42.308 0.00 0.00 0.00 2.43
654 655 6.043938 AGGTGGTGTTTGGTTCTCTAATTCTA 59.956 38.462 0.00 0.00 0.00 2.10
655 656 5.070685 GGTGGTGTTTGGTTCTCTAATTCT 58.929 41.667 0.00 0.00 0.00 2.40
656 657 5.070685 AGGTGGTGTTTGGTTCTCTAATTC 58.929 41.667 0.00 0.00 0.00 2.17
657 658 5.061721 AGGTGGTGTTTGGTTCTCTAATT 57.938 39.130 0.00 0.00 0.00 1.40
658 659 4.724279 AGGTGGTGTTTGGTTCTCTAAT 57.276 40.909 0.00 0.00 0.00 1.73
659 660 4.513406 AAGGTGGTGTTTGGTTCTCTAA 57.487 40.909 0.00 0.00 0.00 2.10
660 661 4.903049 TCTAAGGTGGTGTTTGGTTCTCTA 59.097 41.667 0.00 0.00 0.00 2.43
661 662 3.714798 TCTAAGGTGGTGTTTGGTTCTCT 59.285 43.478 0.00 0.00 0.00 3.10
662 663 4.081322 TCTAAGGTGGTGTTTGGTTCTC 57.919 45.455 0.00 0.00 0.00 2.87
663 664 4.104102 TCATCTAAGGTGGTGTTTGGTTCT 59.896 41.667 0.00 0.00 0.00 3.01
664 665 4.394729 TCATCTAAGGTGGTGTTTGGTTC 58.605 43.478 0.00 0.00 0.00 3.62
665 666 4.398319 CTCATCTAAGGTGGTGTTTGGTT 58.602 43.478 0.00 0.00 0.00 3.67
666 667 3.810743 GCTCATCTAAGGTGGTGTTTGGT 60.811 47.826 0.00 0.00 0.00 3.67
667 668 2.749621 GCTCATCTAAGGTGGTGTTTGG 59.250 50.000 0.00 0.00 0.00 3.28
668 669 3.411446 TGCTCATCTAAGGTGGTGTTTG 58.589 45.455 0.00 0.00 0.00 2.93
669 670 3.788227 TGCTCATCTAAGGTGGTGTTT 57.212 42.857 0.00 0.00 0.00 2.83
670 671 4.684485 GCTATGCTCATCTAAGGTGGTGTT 60.684 45.833 0.00 0.00 0.00 3.32
671 672 3.181461 GCTATGCTCATCTAAGGTGGTGT 60.181 47.826 0.00 0.00 0.00 4.16
672 673 3.070734 AGCTATGCTCATCTAAGGTGGTG 59.929 47.826 0.00 0.00 30.62 4.17
673 674 3.312890 AGCTATGCTCATCTAAGGTGGT 58.687 45.455 0.00 0.00 30.62 4.16
674 675 4.348863 AAGCTATGCTCATCTAAGGTGG 57.651 45.455 0.00 0.00 38.25 4.61
675 676 5.363101 TCAAAGCTATGCTCATCTAAGGTG 58.637 41.667 0.00 0.00 38.25 4.00
676 677 5.620738 TCAAAGCTATGCTCATCTAAGGT 57.379 39.130 0.00 0.00 38.25 3.50
677 678 5.996513 ACATCAAAGCTATGCTCATCTAAGG 59.003 40.000 0.00 0.00 38.25 2.69
723 724 3.118519 GGAGACCAAATTAACTAGCGGGA 60.119 47.826 0.00 0.00 0.00 5.14
731 732 7.179076 TCCACTAGTAGGAGACCAAATTAAC 57.821 40.000 9.25 0.00 0.00 2.01
744 746 0.460311 CCGGTTGCTCCACTAGTAGG 59.540 60.000 1.45 0.00 35.57 3.18
799 817 7.251321 AGAAAAAGAGTCATATCTGTCACCT 57.749 36.000 0.00 0.00 0.00 4.00
813 831 4.357918 TCTGCTGGCTAAGAAAAAGAGT 57.642 40.909 0.00 0.00 0.00 3.24
814 832 5.695851 TTTCTGCTGGCTAAGAAAAAGAG 57.304 39.130 5.88 0.00 38.98 2.85
1017 1583 2.526873 AGTTCTGCCGGTGGGAGT 60.527 61.111 1.90 0.00 42.00 3.85
1074 1640 3.064945 AGCAGCGCGAGAAGGAGA 61.065 61.111 12.10 0.00 0.00 3.71
1292 1882 2.282407 CACGATCATCATCAGCAACCA 58.718 47.619 0.00 0.00 0.00 3.67
1335 1925 9.631452 TTGATCTTGAGCTCGATTATATTACTG 57.369 33.333 9.64 0.00 0.00 2.74
1609 2242 8.877808 AAAAGGCTAAGCAAAAATATCTATGC 57.122 30.769 0.00 0.00 39.06 3.14
1638 2271 8.970859 ATATCATGAGACAAAAACTAAGAGGG 57.029 34.615 0.09 0.00 0.00 4.30
1654 2300 9.237187 ACACACTCCTACAGTATATATCATGAG 57.763 37.037 0.09 0.00 32.21 2.90
1783 2433 5.635700 AGCGTTCACTTTCTTCTGAGATTAC 59.364 40.000 0.00 0.00 0.00 1.89
1786 2436 3.993081 CAGCGTTCACTTTCTTCTGAGAT 59.007 43.478 0.00 0.00 0.00 2.75
1845 2496 4.125703 ACAGTCTGAAGAAGCAAAGTCTG 58.874 43.478 6.91 0.00 33.71 3.51
1895 2580 7.082700 TGACGCAAATATTAAGAAGAATGCA 57.917 32.000 0.00 0.00 33.00 3.96
1898 2583 8.956426 TCCTTTGACGCAAATATTAAGAAGAAT 58.044 29.630 5.66 0.00 32.70 2.40
2269 2962 0.613260 TAATGGTTGCCGCTCTCTGT 59.387 50.000 0.00 0.00 0.00 3.41
2485 3180 7.726216 TGAAGAGTTGAAGAACATGAAGTCTA 58.274 34.615 0.00 0.00 34.17 2.59
2534 3229 4.158025 GTCCGAAGTGAAGGTCTCTATTCA 59.842 45.833 0.00 0.00 33.16 2.57
2538 3233 3.436577 AGTCCGAAGTGAAGGTCTCTA 57.563 47.619 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.